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![]() | Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples |
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![]() | The effects of the RNA editing to the stability of the RNA structures |
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Editing gene: ELF4 (CAeditome ID:2000) |
Gene summary for ELF4 |
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Gene information | Gene symbol | ELF4 | Gene ID | 2000 |
Gene name | E74 like ETS transcription factor 4 | |
Synonyms | ELFR|MEF | |
Cytomap | Xq26.1 | |
Type of gene | protein-coding | |
Description | ETS-related transcription factor Elf-4E74-like factor 4 (ets domain transcription factor)myeloid Elf-1-like factor | |
Modification date | 20210518 | |
UniProtAcc | Q99607 | |
Context | - 33836003(High ELF4 expression in human cancers is associated with worse disease outcomes and increased resistance to anticancer drugs) |
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Gene | GO ID | GO term | PubMed ID |
ELF4 | GO:0000978 | ETS-related transcription factor Elf-4 | 14625302 |
ELF4 | GO:0001228 | ETS-related transcription factor Elf-4 | 14625302 |
ELF4 | GO:1990837 | ETS-related transcription factor Elf-4 | 28473536 |
ELF4 | GO:0045893 | ETS-related transcription factor Elf-4 | 14625302 |
ELF4 | GO:0045893 | ETS-related transcription factor Elf-4 | 8895518 |
ELF4 | GO:0045893 | ETS-related transcription factor Elf-4 | 9524226 |
ELF4 | GO:0045944 | ETS-related transcription factor Elf-4 | 14625302 |
ELF4 | GO:0045944 | ETS-related transcription factor Elf-4 | 14625302 |
ELF4 | GO:0045944 | ETS-related transcription factor Elf-4 | 14970218 |
ELF4 | GO:0045944 | ETS-related transcription factor Elf-4 | 8895518 |
ELF4 | GO:0045944 | ETS-related transcription factor Elf-4 | 9524226 |
ELF4 | GO:0005654 | ETS-related transcription factor Elf-4 | 0000052 |
ELF4 | GO:0016604 | ETS-related transcription factor Elf-4 | 0000052 |
ELF4 | GO:0016605 | ETS-related transcription factor Elf-4 | 14970218 |
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RNA A-to-I events for ELF4 |
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CAediting_1523374(130066871, -), CAediting_1523375(130076504, -), CAediting_1523376(130076505, -), CAediting_1523377(130076528, -), CAediting_1523378(130076552, -), CAediting_1523379(130078184, -), CAediting_1523380(130078185, -), CAediting_1523381(130078211, -), CAediting_1523382(130078214, -), CAediting_1523383(130078224, -), CAediting_1523384(130078225, -), CAediting_1523385(130078228, -), CAediting_1523386(130078278, -), CAediting_1523387(130078283, -), CAediting_1523388(130078670, -), CAediting_1523389(130078674, -), CAediting_1523390(130078719, -), CAediting_1523391(130078726, -), CAediting_1523392(130078902, -), CAediting_1523393(130080308, -), CAediting_1523394(130088467, -), CAediting_1523395(130088544, -), CAediting_1523396(130088601, -), CAediting_1523397(130088613, -), CAediting_1523398(130088637, -), CAediting_1523399(130088661, -), CAediting_1523400(130091483, -), CAediting_1523401(130096248, -), CAediting_1523402(130096250, -), CAediting_1523403(130096261, -), CAediting_1523404(130096286, -), CAediting_1523405(130096299, -), CAediting_1523406(130096321, -), CAediting_1523407(130097046, -), CAediting_1523408(130097075, -), CAediting_1523409(130097079, -), CAediting_1523410(130097094, -), CAediting_1523411(130097384, -), CAediting_1523412(130097385, -), CAediting_1523413(130099465, -), CAediting_1523414(130099491, -), CAediting_1523415(130099492, -), CAediting_1523416(130099736, -), CAediting_1523417(130099779, -), CAediting_1523418(130099783, -), CAediting_1523419(130099820, -), CAediting_1523420(130099840, -), CAediting_1523421(130099841, -), CAediting_1523422(130099864, -), CAediting_1523423(130101716, -), CAediting_1523424(130101717, -), CAediting_1523425(130108059, -), |
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RNA editing positional annotations for ELF4 using Annovar |
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CAeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
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CAeditome ID | Position | Variant type |
CAediting_1523374 | chrX_130066871_- | exonic |
CAediting_1523375 | chrX_130076504_- | intronic |
CAediting_1523376 | chrX_130076505_- | intronic |
CAediting_1523377 | chrX_130076528_- | intronic |
CAediting_1523378 | chrX_130076552_- | intronic |
CAediting_1523379 | chrX_130078184_- | intronic |
CAediting_1523380 | chrX_130078185_- | intronic |
CAediting_1523381 | chrX_130078211_- | intronic |
CAediting_1523382 | chrX_130078214_- | intronic |
CAediting_1523383 | chrX_130078224_- | intronic |
CAediting_1523384 | chrX_130078225_- | intronic |
CAediting_1523385 | chrX_130078228_- | intronic |
CAediting_1523386 | chrX_130078278_- | intronic |
CAediting_1523387 | chrX_130078283_- | intronic |
CAediting_1523388 | chrX_130078670_- | intronic |
CAediting_1523389 | chrX_130078674_- | intronic |
CAediting_1523390 | chrX_130078719_- | intronic |
CAediting_1523391 | chrX_130078726_- | intronic |
CAediting_1523392 | chrX_130078902_- | intronic |
CAediting_1523393 | chrX_130080308_- | intronic |
CAediting_1523394 | chrX_130088467_- | intronic |
CAediting_1523395 | chrX_130088544_- | intronic |
CAediting_1523396 | chrX_130088601_- | intronic |
CAediting_1523397 | chrX_130088613_- | intronic |
CAediting_1523398 | chrX_130088637_- | intronic |
CAediting_1523399 | chrX_130088661_- | intronic |
CAediting_1523400 | chrX_130091483_- | intronic |
CAediting_1523401 | chrX_130096248_- | intronic |
CAediting_1523402 | chrX_130096250_- | intronic |
CAediting_1523403 | chrX_130096261_- | intronic |
CAediting_1523404 | chrX_130096286_- | intronic |
CAediting_1523405 | chrX_130096299_- | intronic |
CAediting_1523406 | chrX_130096321_- | intronic |
CAediting_1523407 | chrX_130097046_- | intronic |
CAediting_1523408 | chrX_130097075_- | intronic |
CAediting_1523409 | chrX_130097079_- | intronic |
CAediting_1523410 | chrX_130097094_- | intronic |
CAediting_1523411 | chrX_130097384_- | intronic |
CAediting_1523412 | chrX_130097385_- | intronic |
CAediting_1523413 | chrX_130099465_- | intronic |
CAediting_1523414 | chrX_130099491_- | intronic |
CAediting_1523415 | chrX_130099492_- | intronic |
CAediting_1523416 | chrX_130099736_- | intronic |
CAediting_1523417 | chrX_130099779_- | intronic |
CAediting_1523418 | chrX_130099783_- | intronic |
CAediting_1523419 | chrX_130099820_- | intronic |
CAediting_1523420 | chrX_130099840_- | intronic |
CAediting_1523421 | chrX_130099841_- | intronic |
CAediting_1523422 | chrX_130099864_- | intronic |
CAediting_1523423 | chrX_130101716_- | intronic |
CAediting_1523424 | chrX_130101717_- | intronic |
CAediting_1523425 | chrX_130108059_- | intronic |
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CAeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
CAediting_1523375 | chrX_130076504_- | SINE | Alu | AluSx1 |
CAediting_1523376 | chrX_130076505_- | SINE | Alu | AluSx1 |
CAediting_1523377 | chrX_130076528_- | SINE | Alu | AluSx1 |
CAediting_1523378 | chrX_130076552_- | SINE | Alu | AluSx1 |
CAediting_1523379 | chrX_130078184_- | SINE | Alu | AluSp |
CAediting_1523380 | chrX_130078185_- | SINE | Alu | AluSp |
CAediting_1523381 | chrX_130078211_- | SINE | Alu | AluSp |
CAediting_1523382 | chrX_130078214_- | SINE | Alu | AluSp |
CAediting_1523383 | chrX_130078224_- | SINE | Alu | AluSp |
CAediting_1523384 | chrX_130078225_- | SINE | Alu | AluSp |
CAediting_1523385 | chrX_130078228_- | SINE | Alu | AluSp |
CAediting_1523386 | chrX_130078278_- | SINE | Alu | AluSp |
CAediting_1523387 | chrX_130078283_- | SINE | Alu | AluSp |
CAediting_1523388 | chrX_130078670_- | SINE | Alu | AluSq2 |
CAediting_1523389 | chrX_130078674_- | SINE | Alu | AluSq2 |
CAediting_1523390 | chrX_130078719_- | SINE | Alu | AluSq2 |
CAediting_1523391 | chrX_130078726_- | SINE | Alu | AluSq2 |
CAediting_1523392 | chrX_130078902_- | SINE | Alu | AluJb |
CAediting_1523393 | chrX_130080308_- | SINE | Alu | AluSz |
CAediting_1523394 | chrX_130088467_- | SINE | Alu | AluSx |
CAediting_1523395 | chrX_130088544_- | SINE | Alu | AluSx |
CAediting_1523396 | chrX_130088601_- | SINE | Alu | AluSx |
CAediting_1523397 | chrX_130088613_- | SINE | Alu | AluSx |
CAediting_1523398 | chrX_130088637_- | SINE | Alu | AluSx |
CAediting_1523399 | chrX_130088661_- | SINE | Alu | AluSx |
CAediting_1523400 | chrX_130091483_- | SINE | Alu | AluJr |
CAediting_1523401 | chrX_130096248_- | SINE | Alu | AluSz6 |
CAediting_1523402 | chrX_130096250_- | SINE | Alu | AluSz6 |
CAediting_1523403 | chrX_130096261_- | SINE | Alu | AluSz6 |
CAediting_1523404 | chrX_130096286_- | SINE | Alu | AluSz6 |
CAediting_1523405 | chrX_130096299_- | SINE | Alu | AluSz6 |
CAediting_1523406 | chrX_130096321_- | SINE | Alu | AluSz6 |
CAediting_1523407 | chrX_130097046_- | SINE | Alu | FLAM_C |
CAediting_1523408 | chrX_130097075_- | SINE | Alu | FLAM_C |
CAediting_1523409 | chrX_130097079_- | SINE | Alu | FLAM_C |
CAediting_1523410 | chrX_130097094_- | SINE | Alu | FLAM_C |
CAediting_1523411 | chrX_130097384_- | SINE | Alu | AluSx |
CAediting_1523412 | chrX_130097385_- | SINE | Alu | AluSx |
CAediting_1523413 | chrX_130099465_- | SINE | Alu | AluSq2 |
CAediting_1523414 | chrX_130099491_- | SINE | Alu | AluSq2 |
CAediting_1523415 | chrX_130099492_- | SINE | Alu | AluSq2 |
CAediting_1523416 | chrX_130099736_- | SINE | Alu | AluSz6 |
CAediting_1523417 | chrX_130099779_- | SINE | Alu | AluSz6 |
CAediting_1523418 | chrX_130099783_- | SINE | Alu | AluSz6 |
CAediting_1523419 | chrX_130099820_- | SINE | Alu | AluSz6 |
CAediting_1523420 | chrX_130099840_- | SINE | Alu | AluSz6 |
CAediting_1523421 | chrX_130099841_- | SINE | Alu | AluSz6 |
CAediting_1523422 | chrX_130099864_- | SINE | Alu | AluSz6 |
CAediting_1523423 | chrX_130101716_- | SINE | Alu | AluSp |
CAediting_1523424 | chrX_130101717_- | SINE | Alu | AluSp |
CAediting_1523425 | chrX_130108059_- | SINE | Alu | AluSp |
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RNA A-to-I editing events in the alternative splicing sites for ELF4 |
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AStype | CAeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for ELF4 |
![]() * The grey color means N/A. |
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Protein coding region RNA A-to-I editings for ELF4 |
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The effects of the RNA editing to the miRNA binding sites for ELF4 |
**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page. |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_748296 | chr10_51299626_+ | ENSG00000102034.15 | ENST00000335997 | hsa-miR-605-3p | 130065825 | 130065831 | 7mer-m8 | 130065824 | 130065845 | 150 | -17.92 |
CAediting_393 | chr1_1167164_+ | ENSG00000102034.15 | ENST00000335997 | hsa-miR-200b-3p | 130066671 | 130066677 | 7mer-m8 | 130066670 | 130066691 | 154 | -14.74 |
CAediting_748296 | chr10_51299626_+ | ENSG00000102034.15 | ENST00000615377 | hsa-miR-605-3p | 130065825 | 130065831 | 7mer-m8 | 130065824 | 130065845 | 150 | -17.92 |
CAediting_393 | chr1_1167164_+ | ENSG00000102034.15 | ENST00000615377 | hsa-miR-200b-3p | 130066671 | 130066677 | 7mer-m8 | 130066670 | 130066691 | 154 | -14.74 |
CAediting_1229413 | chr17_67471544_+ | ENSG00000102034.15 | ENST00000335997 | hsa-miR-548aa | 130065561 | 130065567 | 7mer-m8 | 130065560 | 130065584 | 140 | -15.99 |
CAediting_1351755 | chr19_40282625_- | ENSG00000102034.15 | ENST00000335997 | hsa-miR-641 | 130066227 | 130066233 | 7mer-m8 | 130066226 | 130066248 | 149 | -17.28 |
CAediting_86358 | chr1_109598906_+ | ENSG00000102034.15 | ENST00000335997 | hsa-miR-197-5p | 130065600 | 130065606 | 7mer-m8 | 130065599 | 130065621 | 140 | -17.93 |
CAediting_77128 | chr1_85133844_+ | ENSG00000102034.15 | ENST00000335997 | hsa-miR-4423-3p | 130066556 | 130066562 | 7mer-m8 | 130066555 | 130066575 | 140 | -15.03 |
CAediting_442554 | chr5_154685830_+ | ENSG00000102034.15 | ENST00000335997 | hsa-miR-1303 | 130066244 | 130066250 | 7mer-m8 | 130066243 | 130066264 | 171 | -27.02 |
CAediting_524911 | chr7_5495852_- | ENSG00000102034.15 | ENST00000335997 | hsa-miR-589-3p | 130066138 | 130066145 | 8mer-1a | 130066138 | 130066161 | 152 | -20.13 |
CAediting_1229413 | chr17_67471544_+ | ENSG00000102034.15 | ENST00000615377 | hsa-miR-548aa | 130065561 | 130065567 | 7mer-m8 | 130065560 | 130065584 | 140 | -15.99 |
CAediting_1351755 | chr19_40282625_- | ENSG00000102034.15 | ENST00000615377 | hsa-miR-641 | 130066227 | 130066233 | 7mer-m8 | 130066226 | 130066248 | 149 | -17.28 |
CAediting_86358 | chr1_109598906_+ | ENSG00000102034.15 | ENST00000615377 | hsa-miR-197-5p | 130065600 | 130065606 | 7mer-m8 | 130065599 | 130065621 | 140 | -17.93 |
CAediting_77128 | chr1_85133844_+ | ENSG00000102034.15 | ENST00000615377 | hsa-miR-4423-3p | 130066556 | 130066562 | 7mer-m8 | 130066555 | 130066575 | 140 | -15.03 |
CAediting_442554 | chr5_154685830_+ | ENSG00000102034.15 | ENST00000615377 | hsa-miR-1303 | 130066244 | 130066250 | 7mer-m8 | 130066243 | 130066264 | 171 | -27.02 |
CAediting_524911 | chr7_5495852_- | ENSG00000102034.15 | ENST00000615377 | hsa-miR-589-3p | 130066138 | 130066145 | 8mer-1a | 130066138 | 130066161 | 152 | -20.13 |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_442554 | chr5_154685830_+ | ENSG00000102034.15 | ENST00000335997 | hsa-miR-1303 | 130066173 | 130066179 | 7mer-m8 | 130066172 | 130066192 | 146 | -12.77 |
CAediting_1368054 | chr19_46709310_- | ENSG00000102034.15 | ENST00000335997 | hsa-miR-320e | 130066551 | 130066558 | 8mer-1a | 130066551 | 130066568 | 146 | -15.24 |
CAediting_396018 | chr5_1062918_- | ENSG00000102034.15 | ENST00000335997 | hsa-miR-4635 | 130066518 | 130066525 | 8mer-1a | 130066518 | 130066539 | 145 | -12.56 |
CAediting_414656 | chr5_72878640_+ | ENSG00000102034.15 | ENST00000335997 | hsa-miR-4804-3p | 130065072 | 130065078 | 7mer-m8 | 130065071 | 130065091 | 140 | -6.53 |
CAediting_468389 | chr6_31355314_- | ENSG00000102034.15 | ENST00000335997 | hsa-miR-6891-5p | 130065486 | 130065492 | 7mer-m8 | 130065485 | 130065503 | 140 | -17.42 |
CAediting_442554 | chr5_154685830_+ | ENSG00000102034.15 | ENST00000615377 | hsa-miR-1303 | 130066173 | 130066179 | 7mer-m8 | 130066172 | 130066192 | 146 | -12.77 |
CAediting_1368054 | chr19_46709310_- | ENSG00000102034.15 | ENST00000615377 | hsa-miR-320e | 130066551 | 130066558 | 8mer-1a | 130066551 | 130066568 | 146 | -15.24 |
CAediting_396018 | chr5_1062918_- | ENSG00000102034.15 | ENST00000615377 | hsa-miR-4635 | 130066518 | 130066525 | 8mer-1a | 130066518 | 130066539 | 145 | -12.56 |
CAediting_414656 | chr5_72878640_+ | ENSG00000102034.15 | ENST00000615377 | hsa-miR-4804-3p | 130065072 | 130065078 | 7mer-m8 | 130065071 | 130065091 | 140 | -6.53 |
CAediting_468389 | chr6_31355314_- | ENSG00000102034.15 | ENST00000615377 | hsa-miR-6891-5p | 130065486 | 130065492 | 7mer-m8 | 130065485 | 130065503 | 140 | -17.42 |
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The effects of the RNA editing to the stability of the RNA structures for ELF4 |
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ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
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CAeditom_ID | ENST | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for ELF4 |
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Cancer | CAeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
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Relation with cancer stages for ELF4 |
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Cancer | Stage_type | CAeditomID | position | P-val | Coeff. |
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Relation with survival for ELF4 |
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Cancer | CAeditomID | position | KMpvalue | Coxpvalue | CoxHR |
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RelatedDrugs for ELF4 |
![]() (DrugBank Version 5.1.8 2021-01-03) |
Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for ELF4 |
![]() (DisGeNet 7.0) |
Gene | Disease ID | Disease name | # pubmeds | Source |
ELF4 | C0472813 | X-linked agammaglobulinemia with growth hormone deficiency | 1 | ORPHANET |