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Editing gene: NLRC3 (CAeditome ID:197358)

Gene summary for NLRC3

Gene summary

Gene information	Gene symbol	NLRC3
	Gene ID	197358
	Gene name	NLR family CARD domain containing 3
	Synonyms	CLR16.2\|NOD3
	Cytomap	16p13.3
	Type of gene	protein-coding
	Description	NLR family CARD domain-containing protein 3CARD15-like proteinNACHT, LRR and CARD domains-containing protein 3NOD-like receptor C3caterpiller protein 16.2nucleotide-binding oligomerization domain, leucine rich repeat and CARD domain containing 3
	Modification date	20210518
	UniProtAcc	Q7RTR2
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
NLRC3	GO:0007249	NLR family CARD domain-containing protein 3	15705585
NLRC3	GO:0032088	NLR family CARD domain-containing protein 3	15705585
NLRC3	GO:0032715	NLR family CARD domain-containing protein 3	22863753
NLRC3	GO:0032720	NLR family CARD domain-containing protein 3	22863753
NLRC3	GO:0050728	NLR family CARD domain-containing protein 3	25277106
NLRC3	GO:1900226	NLR family CARD domain-containing protein 3	25277106
NLRC3	GO:1901223	NLR family CARD domain-containing protein 3	25277106
NLRC3	GO:0005737	NLR family CARD domain-containing protein 3	15705585
NLRC3	GO:0005737	NLR family CARD domain-containing protein 3	24560620
NLRC3	GO:0005737	NLR family CARD domain-containing protein 3	25277106
NLRC3	GO:0005829	NLR family CARD domain-containing protein 3	0000052
NLRC3	GO:0034451	NLR family CARD domain-containing protein 3	0000052
NLRC3	GO:0043231	NLR family CARD domain-containing protein 3	0000052
NLRC3	GO:0048471	NLR family CARD domain-containing protein 3	24560620

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RNA A-to-I events for NLRC3

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000167984.15

RNA A-to-I editing events in Cancer.

CAediting_1081469(3540695, -), CAediting_1081470(3540734, -), CAediting_1081471(3540791, -), CAediting_1081472(3540932, -), CAediting_1081473(3541039, -), CAediting_1081474(3541179, -), CAediting_1081475(3547767, -), CAediting_1081476(3547780, -), CAediting_1081477(3547797, -), CAediting_1081478(3547825, -), CAediting_1081479(3547857, -), CAediting_1081480(3547887, -), CAediting_1081481(3547888, -), CAediting_1081482(3547896, -), CAediting_1081483(3547952, -), CAediting_1081484(3555637, -), CAediting_1081485(3555638, -), CAediting_1081486(3555687, -), CAediting_1081487(3555833, -), CAediting_1081488(3556668, -), CAediting_1081489(3559018, -), CAediting_1081490(3559706, -), CAediting_1081491(3559721, -), CAediting_1081492(3559724, -), CAediting_1081493(3559744, -), CAediting_1081494(3559753, -), CAediting_1081495(3559776, -), CAediting_1081496(3559777, -), CAediting_1081497(3559810, -), CAediting_1081498(3559811, -), CAediting_1081499(3559812, -), CAediting_1081500(3559813, -), CAediting_1081501(3559815, -), CAediting_1081502(3559839, -), CAediting_1081503(3560170, -), CAediting_1081504(3561225, -), CAediting_1081505(3561271, -), CAediting_1081506(3566388, -), CAediting_1081507(3567528, -), CAediting_1081508(3567539, -), CAediting_1081509(3567582, -), CAediting_1081510(3567591, -), CAediting_1081511(3567608, -), CAediting_1081512(3567611, -), CAediting_1081513(3567614, -), CAediting_1081514(3567685, -), CAediting_1081515(3567928, -), CAediting_1081516(3567933, -), CAediting_1081517(3567942, -), CAediting_1081518(3567948, -), CAediting_1081519(3567951, -), CAediting_1081520(3567971, -), CAediting_1081521(3567977, -), CAediting_1081522(3567994, -), CAediting_1081523(3568004, -), CAediting_1081524(3568014, -), CAediting_1081525(3568030, -), CAediting_1081526(3568092, -), CAediting_1081527(3568458, -), CAediting_1081528(3568461, -), CAediting_1081529(3568464, -), CAediting_1081530(3568480, -), CAediting_1081531(3568506, -), CAediting_1081532(3568521, -), CAediting_1081533(3568632, -), CAediting_1081534(3568641, -), CAediting_1081535(3568645, -), CAediting_1081536(3568651, -), CAediting_1081537(3568688, -), CAediting_1081538(3568713, -), CAediting_1081539(3569057, -), CAediting_1081540(3569131, -), CAediting_1081541(3569146, -), CAediting_1081542(3569151, -), CAediting_1081543(3569214, -), CAediting_1081544(3569219, -), CAediting_1081545(3569231, -), CAediting_1081546(3569251, -), CAediting_1081547(3569439, -), CAediting_1081548(3569477, -), CAediting_1081549(3569484, -), CAediting_1081550(3569501, -), CAediting_1081551(3569504, -), CAediting_1081552(3569510, -), CAediting_1081553(3569515, -), CAediting_1081554(3569536, -), CAediting_1081555(3569537, -), CAediting_1081556(3569563, -), CAediting_1081557(3569566, -), CAediting_1081558(3569567, -), CAediting_1081559(3569569, -), CAediting_1081560(3569591, -), CAediting_1081561(3569592, -), CAediting_1081562(3569601, -), CAediting_1081563(3569616, -), CAediting_1081564(3569617, -), CAediting_1081565(3569625, -), CAediting_1081566(3569647, -), CAediting_1081567(3569671, -), CAediting_1081568(3569673, -), CAediting_1081569(3569677, -), CAediting_1081570(3569679, -), CAediting_1081571(3570227, -), CAediting_1081572(3570250, -), CAediting_1081573(3570257, -), CAediting_1081574(3571367, -), CAediting_1081575(3571429, -), CAediting_1081576(3571433, -), CAediting_1081577(3571462, -), CAediting_1081578(3571482, -), CAediting_1081579(3571487, -), CAediting_1081580(3571492, -), CAediting_1081581(3571497, -), CAediting_1081582(3571498, -), CAediting_1081583(3571517, -), CAediting_1081584(3571544, -), CAediting_1081585(3571805, -), CAediting_1081586(3572362, -), CAediting_1081587(3572371, -), CAediting_1081588(3572388, -), CAediting_1081589(3572398, -), CAediting_1081590(3572403, -), CAediting_1081591(3572426, -), CAediting_1081592(3572439, -), CAediting_1081593(3572455, -), CAediting_1081594(3572456, -), CAediting_1081595(3572465, -), CAediting_1081596(3572470, -), CAediting_1081597(3572483, -), CAediting_1081598(3572484, -), CAediting_1081599(3572491, -), CAediting_1081600(3572492, -), CAediting_1081601(3572496, -), CAediting_1081602(3572515, -), CAediting_1081603(3572530, -), CAediting_1081604(3572539, -), CAediting_1081605(3572555, -), CAediting_1081606(3572561, -), CAediting_1081607(3572756, -), CAediting_1081608(3572796, -), CAediting_1081609(3572830, -), CAediting_1081610(3572850, -), CAediting_1081611(3572981, -), CAediting_1081612(3573196, -), CAediting_1081613(3573214, -), CAediting_1081614(3573226, -), CAediting_1081615(3573255, -), CAediting_1081616(3573292, -), CAediting_1081617(3573299, -), CAediting_1081618(3573305, -), CAediting_1081619(3573315, -), CAediting_1081620(3573328, -), CAediting_1081621(3573345, -), CAediting_1081622(3573346, -), CAediting_1081623(3573375, -), CAediting_1081624(3573386, -), CAediting_1081625(3573389, -), CAediting_1081626(3573853, -), CAediting_1081627(3573857, -), CAediting_1081628(3573866, -), CAediting_1081629(3573879, -), CAediting_1081630(3573886, -), CAediting_1081631(3573887, -), CAediting_1081632(3573891, -), CAediting_1081633(3573921, -), CAediting_1081634(3573951, -), CAediting_1081635(3573956, -), CAediting_1081636(3573957, -), CAediting_1081637(3574077, -), CAediting_1081638(3574086, -), CAediting_1081639(3574095, -), CAediting_1081640(3574099, -), CAediting_1081641(3574108, -), CAediting_1081642(3574112, -), CAediting_1081643(3574115, -), CAediting_1081644(3574119, -), CAediting_1081645(3574120, -), CAediting_1081646(3574125, -), CAediting_1081647(3574128, -), CAediting_1081648(3574147, -), CAediting_1081649(3574151, -), CAediting_1081650(3574155, -), CAediting_1081651(3574160, -), CAediting_1081652(3574163, -), CAediting_1081653(3574208, -), CAediting_1081654(3574210, -), CAediting_1081655(3574216, -), CAediting_1081656(3574218, -), CAediting_1081657(3574228, -), CAediting_1081658(3574233, -), CAediting_1081659(3574234, -), CAediting_1081660(3574242, -), CAediting_1081661(3574258, -), CAediting_1081662(3574263, -), CAediting_1081663(3574264, -), CAediting_1081664(3574698, -), CAediting_1081665(3574704, -), CAediting_1081666(3574710, -), CAediting_1081667(3574716, -), CAediting_1081668(3574770, -), CAediting_1081669(3574796, -), CAediting_1081670(3574827, -), CAediting_1081671(3574830, -), CAediting_1081672(3574840, -), CAediting_1081673(3574850, -), CAediting_1081674(3574862, -), CAediting_1081675(3574880, -), CAediting_1081676(3574885, -), CAediting_1081677(3574893, -), CAediting_1081678(3574900, -), CAediting_1081679(3574915, -), CAediting_1081680(3576651, -), CAediting_1081681(3576759, -), CAediting_1081682(3576804, -), CAediting_1081683(3576827, -), CAediting_1081684(3576831, -), CAediting_1081685(3576873, -), CAediting_1081686(3576921, -),

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RNA editing positional annotations for NLRC3 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1081469	chr16_3540695_-	UTR3
CAediting_1081470	chr16_3540734_-	UTR3
CAediting_1081471	chr16_3540791_-	UTR3
CAediting_1081472	chr16_3540932_-	UTR3
CAediting_1081473	chr16_3541039_-	UTR3
CAediting_1081474	chr16_3541179_-	UTR3
CAediting_1081475	chr16_3547767_-	intronic
CAediting_1081476	chr16_3547780_-	intronic
CAediting_1081477	chr16_3547797_-	intronic
CAediting_1081478	chr16_3547825_-	intronic
CAediting_1081479	chr16_3547857_-	intronic
CAediting_1081480	chr16_3547887_-	intronic
CAediting_1081481	chr16_3547888_-	intronic
CAediting_1081482	chr16_3547896_-	intronic
CAediting_1081483	chr16_3547952_-	intronic
CAediting_1081484	chr16_3555637_-	intronic
CAediting_1081485	chr16_3555638_-	intronic
CAediting_1081486	chr16_3555687_-	intronic
CAediting_1081487	chr16_3555833_-	exonic
CAediting_1081488	chr16_3556668_-	intronic
CAediting_1081489	chr16_3559018_-	intronic
CAediting_1081490	chr16_3559706_-	intronic
CAediting_1081491	chr16_3559721_-	intronic
CAediting_1081492	chr16_3559724_-	intronic
CAediting_1081493	chr16_3559744_-	intronic
CAediting_1081494	chr16_3559753_-	intronic
CAediting_1081495	chr16_3559776_-	intronic
CAediting_1081496	chr16_3559777_-	intronic
CAediting_1081497	chr16_3559810_-	intronic
CAediting_1081498	chr16_3559811_-	intronic
CAediting_1081499	chr16_3559812_-	intronic
CAediting_1081500	chr16_3559813_-	intronic
CAediting_1081501	chr16_3559815_-	intronic
CAediting_1081502	chr16_3559839_-	intronic
CAediting_1081503	chr16_3560170_-	intronic
CAediting_1081504	chr16_3561225_-	intronic
CAediting_1081505	chr16_3561271_-	intronic
CAediting_1081506	chr16_3566388_-	ncRNA_intronic
CAediting_1081507	chr16_3567528_-	ncRNA_intronic
CAediting_1081508	chr16_3567539_-	ncRNA_intronic
CAediting_1081509	chr16_3567582_-	ncRNA_intronic
CAediting_1081510	chr16_3567591_-	ncRNA_intronic
CAediting_1081511	chr16_3567608_-	ncRNA_intronic
CAediting_1081512	chr16_3567611_-	ncRNA_intronic
CAediting_1081513	chr16_3567614_-	ncRNA_intronic
CAediting_1081514	chr16_3567685_-	ncRNA_intronic
CAediting_1081515	chr16_3567928_-	ncRNA_intronic
CAediting_1081516	chr16_3567933_-	ncRNA_intronic
CAediting_1081517	chr16_3567942_-	ncRNA_intronic
CAediting_1081518	chr16_3567948_-	ncRNA_intronic
CAediting_1081519	chr16_3567951_-	ncRNA_intronic
CAediting_1081520	chr16_3567971_-	ncRNA_intronic
CAediting_1081521	chr16_3567977_-	ncRNA_intronic
CAediting_1081522	chr16_3567994_-	ncRNA_intronic
CAediting_1081523	chr16_3568004_-	ncRNA_intronic
CAediting_1081524	chr16_3568014_-	ncRNA_intronic
CAediting_1081525	chr16_3568030_-	ncRNA_intronic
CAediting_1081526	chr16_3568092_-	ncRNA_intronic
CAediting_1081527	chr16_3568458_-	ncRNA_intronic
CAediting_1081528	chr16_3568461_-	ncRNA_intronic
CAediting_1081529	chr16_3568464_-	ncRNA_intronic
CAediting_1081530	chr16_3568480_-	ncRNA_intronic
CAediting_1081531	chr16_3568506_-	ncRNA_intronic
CAediting_1081532	chr16_3568521_-	ncRNA_intronic
CAediting_1081533	chr16_3568632_-	ncRNA_intronic
CAediting_1081534	chr16_3568641_-	ncRNA_intronic
CAediting_1081535	chr16_3568645_-	ncRNA_intronic
CAediting_1081536	chr16_3568651_-	ncRNA_intronic
CAediting_1081537	chr16_3568688_-	ncRNA_intronic
CAediting_1081538	chr16_3568713_-	ncRNA_intronic
CAediting_1081539	chr16_3569057_-	ncRNA_intronic
CAediting_1081540	chr16_3569131_-	ncRNA_intronic
CAediting_1081541	chr16_3569146_-	ncRNA_intronic
CAediting_1081542	chr16_3569151_-	ncRNA_intronic
CAediting_1081543	chr16_3569214_-	ncRNA_intronic
CAediting_1081544	chr16_3569219_-	ncRNA_intronic
CAediting_1081545	chr16_3569231_-	ncRNA_intronic
CAediting_1081546	chr16_3569251_-	ncRNA_intronic
CAediting_1081547	chr16_3569439_-	ncRNA_intronic
CAediting_1081548	chr16_3569477_-	ncRNA_intronic
CAediting_1081549	chr16_3569484_-	ncRNA_intronic
CAediting_1081550	chr16_3569501_-	ncRNA_intronic
CAediting_1081551	chr16_3569504_-	ncRNA_intronic
CAediting_1081552	chr16_3569510_-	ncRNA_intronic
CAediting_1081553	chr16_3569515_-	ncRNA_intronic
CAediting_1081554	chr16_3569536_-	ncRNA_intronic
CAediting_1081555	chr16_3569537_-	ncRNA_intronic
CAediting_1081556	chr16_3569563_-	ncRNA_intronic
CAediting_1081557	chr16_3569566_-	ncRNA_intronic
CAediting_1081558	chr16_3569567_-	ncRNA_intronic
CAediting_1081559	chr16_3569569_-	ncRNA_intronic
CAediting_1081560	chr16_3569591_-	ncRNA_intronic
CAediting_1081561	chr16_3569592_-	ncRNA_intronic
CAediting_1081562	chr16_3569601_-	ncRNA_intronic
CAediting_1081563	chr16_3569616_-	ncRNA_intronic
CAediting_1081564	chr16_3569617_-	ncRNA_intronic
CAediting_1081565	chr16_3569625_-	ncRNA_intronic
CAediting_1081566	chr16_3569647_-	ncRNA_intronic
CAediting_1081567	chr16_3569671_-	ncRNA_intronic
CAediting_1081568	chr16_3569673_-	ncRNA_intronic
CAediting_1081569	chr16_3569677_-	ncRNA_intronic
CAediting_1081570	chr16_3569679_-	ncRNA_intronic
CAediting_1081571	chr16_3570227_-	ncRNA_intronic
CAediting_1081572	chr16_3570250_-	ncRNA_intronic
CAediting_1081573	chr16_3570257_-	ncRNA_intronic
CAediting_1081574	chr16_3571367_-	ncRNA_intronic
CAediting_1081575	chr16_3571429_-	ncRNA_intronic
CAediting_1081576	chr16_3571433_-	ncRNA_intronic
CAediting_1081577	chr16_3571462_-	ncRNA_intronic
CAediting_1081578	chr16_3571482_-	ncRNA_intronic
CAediting_1081579	chr16_3571487_-	ncRNA_intronic
CAediting_1081580	chr16_3571492_-	ncRNA_intronic
CAediting_1081581	chr16_3571497_-	ncRNA_intronic
CAediting_1081582	chr16_3571498_-	ncRNA_intronic
CAediting_1081583	chr16_3571517_-	ncRNA_intronic
CAediting_1081584	chr16_3571544_-	ncRNA_intronic
CAediting_1081585	chr16_3571805_-	ncRNA_intronic
CAediting_1081586	chr16_3572362_-	ncRNA_intronic
CAediting_1081587	chr16_3572371_-	ncRNA_intronic
CAediting_1081588	chr16_3572388_-	ncRNA_intronic
CAediting_1081589	chr16_3572398_-	ncRNA_intronic
CAediting_1081590	chr16_3572403_-	ncRNA_intronic
CAediting_1081591	chr16_3572426_-	ncRNA_intronic
CAediting_1081592	chr16_3572439_-	ncRNA_intronic
CAediting_1081593	chr16_3572455_-	ncRNA_intronic
CAediting_1081594	chr16_3572456_-	ncRNA_intronic
CAediting_1081595	chr16_3572465_-	ncRNA_intronic
CAediting_1081596	chr16_3572470_-	ncRNA_intronic
CAediting_1081597	chr16_3572483_-	ncRNA_intronic
CAediting_1081598	chr16_3572484_-	ncRNA_intronic
CAediting_1081599	chr16_3572491_-	ncRNA_intronic
CAediting_1081600	chr16_3572492_-	ncRNA_intronic
CAediting_1081601	chr16_3572496_-	ncRNA_intronic
CAediting_1081602	chr16_3572515_-	ncRNA_intronic
CAediting_1081603	chr16_3572530_-	ncRNA_intronic
CAediting_1081604	chr16_3572539_-	ncRNA_intronic
CAediting_1081605	chr16_3572555_-	ncRNA_intronic
CAediting_1081606	chr16_3572561_-	ncRNA_intronic
CAediting_1081607	chr16_3572756_-	ncRNA_intronic
CAediting_1081608	chr16_3572796_-	ncRNA_intronic
CAediting_1081609	chr16_3572830_-	ncRNA_intronic
CAediting_1081610	chr16_3572850_-	ncRNA_intronic
CAediting_1081611	chr16_3572981_-	ncRNA_intronic
CAediting_1081612	chr16_3573196_-	ncRNA_intronic
CAediting_1081613	chr16_3573214_-	ncRNA_intronic
CAediting_1081614	chr16_3573226_-	ncRNA_intronic
CAediting_1081615	chr16_3573255_-	ncRNA_intronic
CAediting_1081616	chr16_3573292_-	ncRNA_intronic
CAediting_1081617	chr16_3573299_-	ncRNA_intronic
CAediting_1081618	chr16_3573305_-	ncRNA_intronic
CAediting_1081619	chr16_3573315_-	ncRNA_intronic
CAediting_1081620	chr16_3573328_-	ncRNA_intronic
CAediting_1081621	chr16_3573345_-	ncRNA_intronic
CAediting_1081622	chr16_3573346_-	ncRNA_intronic
CAediting_1081623	chr16_3573375_-	ncRNA_intronic
CAediting_1081624	chr16_3573386_-	ncRNA_intronic
CAediting_1081625	chr16_3573389_-	ncRNA_intronic
CAediting_1081626	chr16_3573853_-	ncRNA_intronic
CAediting_1081627	chr16_3573857_-	ncRNA_intronic
CAediting_1081628	chr16_3573866_-	ncRNA_intronic
CAediting_1081629	chr16_3573879_-	ncRNA_intronic
CAediting_1081630	chr16_3573886_-	ncRNA_intronic
CAediting_1081631	chr16_3573887_-	ncRNA_intronic
CAediting_1081632	chr16_3573891_-	ncRNA_intronic
CAediting_1081633	chr16_3573921_-	ncRNA_intronic
CAediting_1081634	chr16_3573951_-	ncRNA_intronic
CAediting_1081635	chr16_3573956_-	ncRNA_intronic
CAediting_1081636	chr16_3573957_-	ncRNA_intronic
CAediting_1081637	chr16_3574077_-	ncRNA_intronic
CAediting_1081638	chr16_3574086_-	ncRNA_intronic
CAediting_1081639	chr16_3574095_-	ncRNA_intronic
CAediting_1081640	chr16_3574099_-	ncRNA_intronic
CAediting_1081641	chr16_3574108_-	ncRNA_intronic
CAediting_1081642	chr16_3574112_-	ncRNA_intronic
CAediting_1081643	chr16_3574115_-	ncRNA_intronic
CAediting_1081644	chr16_3574119_-	ncRNA_intronic
CAediting_1081645	chr16_3574120_-	ncRNA_intronic
CAediting_1081646	chr16_3574125_-	ncRNA_intronic
CAediting_1081647	chr16_3574128_-	ncRNA_intronic
CAediting_1081648	chr16_3574147_-	ncRNA_intronic
CAediting_1081649	chr16_3574151_-	ncRNA_intronic
CAediting_1081650	chr16_3574155_-	ncRNA_intronic
CAediting_1081651	chr16_3574160_-	ncRNA_intronic
CAediting_1081652	chr16_3574163_-	ncRNA_intronic
CAediting_1081653	chr16_3574208_-	ncRNA_intronic
CAediting_1081654	chr16_3574210_-	ncRNA_intronic
CAediting_1081655	chr16_3574216_-	ncRNA_intronic
CAediting_1081656	chr16_3574218_-	ncRNA_intronic
CAediting_1081657	chr16_3574228_-	ncRNA_intronic
CAediting_1081658	chr16_3574233_-	ncRNA_intronic
CAediting_1081659	chr16_3574234_-	ncRNA_intronic
CAediting_1081660	chr16_3574242_-	ncRNA_intronic
CAediting_1081661	chr16_3574258_-	ncRNA_intronic
CAediting_1081662	chr16_3574263_-	ncRNA_intronic
CAediting_1081663	chr16_3574264_-	ncRNA_intronic
CAediting_1081664	chr16_3574698_-	ncRNA_intronic
CAediting_1081665	chr16_3574704_-	ncRNA_intronic
CAediting_1081666	chr16_3574710_-	ncRNA_intronic
CAediting_1081667	chr16_3574716_-	ncRNA_intronic
CAediting_1081668	chr16_3574770_-	ncRNA_intronic
CAediting_1081669	chr16_3574796_-	ncRNA_intronic
CAediting_1081670	chr16_3574827_-	ncRNA_intronic
CAediting_1081671	chr16_3574830_-	ncRNA_intronic
CAediting_1081672	chr16_3574840_-	ncRNA_intronic
CAediting_1081673	chr16_3574850_-	ncRNA_intronic
CAediting_1081674	chr16_3574862_-	ncRNA_intronic
CAediting_1081675	chr16_3574880_-	ncRNA_intronic
CAediting_1081676	chr16_3574885_-	ncRNA_intronic
CAediting_1081677	chr16_3574893_-	ncRNA_intronic
CAediting_1081678	chr16_3574900_-	ncRNA_intronic
CAediting_1081679	chr16_3574915_-	ncRNA_intronic
CAediting_1081680	chr16_3576651_-	ncRNA_intronic
CAediting_1081681	chr16_3576759_-	ncRNA_intronic
CAediting_1081682	chr16_3576804_-	ncRNA_intronic
CAediting_1081683	chr16_3576827_-	ncRNA_intronic
CAediting_1081684	chr16_3576831_-	ncRNA_intronic
CAediting_1081685	chr16_3576873_-	ncRNA_intronic
CAediting_1081686	chr16_3576921_-	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1081469	chr16_3540695_-	SINE	Alu	AluSz
CAediting_1081470	chr16_3540734_-	SINE	Alu	AluSz
CAediting_1081471	chr16_3540791_-	SINE	Alu	AluSz
CAediting_1081472	chr16_3540932_-	SINE	Alu	AluSq2
CAediting_1081473	chr16_3541039_-	SINE	Alu	AluSq2
CAediting_1081474	chr16_3541179_-	SINE	Alu	AluSq2
CAediting_1081475	chr16_3547767_-	SINE	Alu	AluSx
CAediting_1081476	chr16_3547780_-	SINE	Alu	AluSx
CAediting_1081477	chr16_3547797_-	SINE	Alu	AluSx
CAediting_1081478	chr16_3547825_-	SINE	Alu	AluSx
CAediting_1081479	chr16_3547857_-	SINE	Alu	AluSx
CAediting_1081480	chr16_3547887_-	SINE	Alu	AluSx
CAediting_1081481	chr16_3547888_-	SINE	Alu	AluSx
CAediting_1081482	chr16_3547896_-	SINE	Alu	AluSx
CAediting_1081483	chr16_3547952_-	SINE	Alu	AluSx
CAediting_1081484	chr16_3555637_-	SINE	Alu	AluSx1
CAediting_1081485	chr16_3555638_-	SINE	Alu	AluSx1
CAediting_1081486	chr16_3555687_-	SINE	Alu	AluSx1
CAediting_1081487	chr16_3555833_-	SINE	Alu	AluSx1
CAediting_1081488	chr16_3556668_-	SINE	Alu	AluSx1
CAediting_1081489	chr16_3559018_-	SINE	Alu	AluJo
CAediting_1081490	chr16_3559706_-	SINE	Alu	AluSx1
CAediting_1081491	chr16_3559721_-	SINE	Alu	AluSx1
CAediting_1081492	chr16_3559724_-	SINE	Alu	AluSx1
CAediting_1081493	chr16_3559744_-	SINE	Alu	AluSx1
CAediting_1081494	chr16_3559753_-	SINE	Alu	AluSx1
CAediting_1081495	chr16_3559776_-	SINE	Alu	AluSx1
CAediting_1081496	chr16_3559777_-	SINE	Alu	AluSx1
CAediting_1081497	chr16_3559810_-	SINE	Alu	AluSx1
CAediting_1081498	chr16_3559811_-	SINE	Alu	AluSx1
CAediting_1081499	chr16_3559812_-	SINE	Alu	AluSx1
CAediting_1081500	chr16_3559813_-	SINE	Alu	AluSx1
CAediting_1081501	chr16_3559815_-	SINE	Alu	AluSx1
CAediting_1081502	chr16_3559839_-	SINE	Alu	AluSx1
CAediting_1081503	chr16_3560170_-	SINE	Alu	AluSx
CAediting_1081504	chr16_3561225_-	SINE	Alu	AluSg
CAediting_1081505	chr16_3561271_-	SINE	Alu	AluSg
CAediting_1081506	chr16_3566388_-	SINE	Alu	AluSx1
CAediting_1081507	chr16_3567528_-	SINE	Alu	AluSx1
CAediting_1081508	chr16_3567539_-	SINE	Alu	AluSx1
CAediting_1081509	chr16_3567582_-	SINE	Alu	AluSx1
CAediting_1081510	chr16_3567591_-	SINE	Alu	AluSx1
CAediting_1081511	chr16_3567608_-	SINE	Alu	AluSx1
CAediting_1081512	chr16_3567611_-	SINE	Alu	AluSx1
CAediting_1081513	chr16_3567614_-	SINE	Alu	AluSx1
CAediting_1081514	chr16_3567685_-	SINE	Alu	AluSx1
CAediting_1081515	chr16_3567928_-	SINE	Alu	AluSg
CAediting_1081516	chr16_3567933_-	SINE	Alu	AluSg
CAediting_1081517	chr16_3567942_-	SINE	Alu	AluSg
CAediting_1081518	chr16_3567948_-	SINE	Alu	AluSg
CAediting_1081519	chr16_3567951_-	SINE	Alu	AluSg
CAediting_1081520	chr16_3567971_-	SINE	Alu	AluSg
CAediting_1081521	chr16_3567977_-	SINE	Alu	AluSg
CAediting_1081522	chr16_3567994_-	SINE	Alu	AluSg
CAediting_1081523	chr16_3568004_-	SINE	Alu	AluSg
CAediting_1081524	chr16_3568014_-	SINE	Alu	AluSg
CAediting_1081525	chr16_3568030_-	SINE	Alu	AluSg
CAediting_1081526	chr16_3568092_-	SINE	Alu	AluSg
CAediting_1081527	chr16_3568458_-	SINE	Alu	AluJb
CAediting_1081528	chr16_3568461_-	SINE	Alu	AluJb
CAediting_1081529	chr16_3568464_-	SINE	Alu	AluJb
CAediting_1081530	chr16_3568480_-	SINE	Alu	AluJb
CAediting_1081531	chr16_3568506_-	SINE	Alu	AluJb
CAediting_1081532	chr16_3568521_-	SINE	Alu	AluJb
CAediting_1081533	chr16_3568632_-	SINE	Alu	AluJb
CAediting_1081534	chr16_3568641_-	SINE	Alu	AluJb
CAediting_1081535	chr16_3568645_-	SINE	Alu	AluJb
CAediting_1081536	chr16_3568651_-	SINE	Alu	AluJb
CAediting_1081537	chr16_3568688_-	SINE	Alu	AluJb
CAediting_1081538	chr16_3568713_-	SINE	Alu	AluJb
CAediting_1081539	chr16_3569057_-	SINE	Alu	AluSz
CAediting_1081540	chr16_3569131_-	SINE	Alu	AluSz
CAediting_1081541	chr16_3569146_-	SINE	Alu	AluSz
CAediting_1081542	chr16_3569151_-	SINE	Alu	AluSz
CAediting_1081543	chr16_3569214_-	SINE	Alu	AluSz
CAediting_1081544	chr16_3569219_-	SINE	Alu	AluSz
CAediting_1081545	chr16_3569231_-	SINE	Alu	AluSz
CAediting_1081546	chr16_3569251_-	SINE	Alu	AluSz
CAediting_1081547	chr16_3569439_-	SINE	Alu	AluSz
CAediting_1081548	chr16_3569477_-	SINE	Alu	AluSz
CAediting_1081549	chr16_3569484_-	SINE	Alu	AluSz
CAediting_1081550	chr16_3569501_-	SINE	Alu	AluSz
CAediting_1081551	chr16_3569504_-	SINE	Alu	AluSz
CAediting_1081552	chr16_3569510_-	SINE	Alu	AluSz
CAediting_1081553	chr16_3569515_-	SINE	Alu	AluSz
CAediting_1081554	chr16_3569536_-	SINE	Alu	AluSz
CAediting_1081555	chr16_3569537_-	SINE	Alu	AluSz
CAediting_1081556	chr16_3569563_-	SINE	Alu	AluSz
CAediting_1081557	chr16_3569566_-	SINE	Alu	AluSz
CAediting_1081558	chr16_3569567_-	SINE	Alu	AluSz
CAediting_1081559	chr16_3569569_-	SINE	Alu	AluSz
CAediting_1081560	chr16_3569591_-	SINE	Alu	AluSz
CAediting_1081561	chr16_3569592_-	SINE	Alu	AluSz
CAediting_1081562	chr16_3569601_-	SINE	Alu	AluSz
CAediting_1081563	chr16_3569616_-	SINE	Alu	AluSz
CAediting_1081564	chr16_3569617_-	SINE	Alu	AluSz
CAediting_1081565	chr16_3569625_-	SINE	Alu	AluSz
CAediting_1081566	chr16_3569647_-	SINE	Alu	AluSz
CAediting_1081567	chr16_3569671_-	SINE	Alu	AluSz
CAediting_1081568	chr16_3569673_-	SINE	Alu	AluSz
CAediting_1081569	chr16_3569677_-	SINE	Alu	AluSz
CAediting_1081570	chr16_3569679_-	SINE	Alu	AluSz
CAediting_1081571	chr16_3570227_-	SINE	Alu	AluSz
CAediting_1081572	chr16_3570250_-	SINE	Alu	AluSz
CAediting_1081573	chr16_3570257_-	SINE	Alu	AluSz
CAediting_1081574	chr16_3571367_-	SINE	Alu	AluJo
CAediting_1081575	chr16_3571429_-	SINE	Alu	AluJo
CAediting_1081576	chr16_3571433_-	SINE	Alu	AluJo
CAediting_1081577	chr16_3571462_-	SINE	Alu	AluJo
CAediting_1081578	chr16_3571482_-	SINE	Alu	AluJo
CAediting_1081579	chr16_3571487_-	SINE	Alu	AluJo
CAediting_1081580	chr16_3571492_-	SINE	Alu	AluJo
CAediting_1081581	chr16_3571497_-	SINE	Alu	AluJo
CAediting_1081582	chr16_3571498_-	SINE	Alu	AluJo
CAediting_1081583	chr16_3571517_-	SINE	Alu	AluJo
CAediting_1081584	chr16_3571544_-	SINE	Alu	AluJo
CAediting_1081585	chr16_3571805_-	SINE	Alu	AluSg
CAediting_1081586	chr16_3572362_-	SINE	Alu	AluJo
CAediting_1081587	chr16_3572371_-	SINE	Alu	AluJo
CAediting_1081588	chr16_3572388_-	SINE	Alu	AluJo
CAediting_1081589	chr16_3572398_-	SINE	Alu	AluJo
CAediting_1081590	chr16_3572403_-	SINE	Alu	AluJo
CAediting_1081591	chr16_3572426_-	SINE	Alu	AluJo
CAediting_1081592	chr16_3572439_-	SINE	Alu	AluJo
CAediting_1081593	chr16_3572455_-	SINE	Alu	AluJo
CAediting_1081594	chr16_3572456_-	SINE	Alu	AluJo
CAediting_1081595	chr16_3572465_-	SINE	Alu	AluJo
CAediting_1081596	chr16_3572470_-	SINE	Alu	AluJo
CAediting_1081597	chr16_3572483_-	SINE	Alu	AluJo
CAediting_1081598	chr16_3572484_-	SINE	Alu	AluJo
CAediting_1081599	chr16_3572491_-	SINE	Alu	AluJo
CAediting_1081600	chr16_3572492_-	SINE	Alu	AluJo
CAediting_1081601	chr16_3572496_-	SINE	Alu	AluJo
CAediting_1081602	chr16_3572515_-	SINE	Alu	AluJo
CAediting_1081603	chr16_3572530_-	SINE	Alu	AluJo
CAediting_1081604	chr16_3572539_-	SINE	Alu	AluJo
CAediting_1081605	chr16_3572555_-	SINE	Alu	AluJo
CAediting_1081606	chr16_3572561_-	SINE	Alu	AluJo
CAediting_1081607	chr16_3572756_-	SINE	Alu	AluSx1
CAediting_1081608	chr16_3572796_-	SINE	Alu	AluSx1
CAediting_1081609	chr16_3572830_-	SINE	Alu	AluSx1
CAediting_1081610	chr16_3572850_-	SINE	Alu	AluSx1
CAediting_1081611	chr16_3572981_-	SINE	Alu	AluSx1
CAediting_1081612	chr16_3573196_-	SINE	Alu	AluJb
CAediting_1081613	chr16_3573214_-	SINE	Alu	AluJb
CAediting_1081614	chr16_3573226_-	SINE	Alu	AluJb
CAediting_1081615	chr16_3573255_-	SINE	Alu	AluJb
CAediting_1081616	chr16_3573292_-	SINE	Alu	AluJb
CAediting_1081617	chr16_3573299_-	SINE	Alu	AluJb
CAediting_1081618	chr16_3573305_-	SINE	Alu	AluJb
CAediting_1081619	chr16_3573315_-	SINE	Alu	AluJb
CAediting_1081620	chr16_3573328_-	SINE	Alu	AluJb
CAediting_1081621	chr16_3573345_-	SINE	Alu	AluJb
CAediting_1081622	chr16_3573346_-	SINE	Alu	AluJb
CAediting_1081623	chr16_3573375_-	SINE	Alu	AluJb
CAediting_1081624	chr16_3573386_-	SINE	Alu	AluJb
CAediting_1081625	chr16_3573389_-	SINE	Alu	AluJb
CAediting_1081626	chr16_3573853_-	SINE	Alu	AluJb
CAediting_1081627	chr16_3573857_-	SINE	Alu	AluJb
CAediting_1081628	chr16_3573866_-	SINE	Alu	AluJb
CAediting_1081629	chr16_3573879_-	SINE	Alu	AluJb
CAediting_1081630	chr16_3573886_-	SINE	Alu	AluJb
CAediting_1081631	chr16_3573887_-	SINE	Alu	AluJb
CAediting_1081632	chr16_3573891_-	SINE	Alu	AluJb
CAediting_1081633	chr16_3573921_-	SINE	Alu	AluJb
CAediting_1081634	chr16_3573951_-	SINE	Alu	AluJb
CAediting_1081635	chr16_3573956_-	SINE	Alu	AluJb
CAediting_1081636	chr16_3573957_-	SINE	Alu	AluJb
CAediting_1081637	chr16_3574077_-	SINE	Alu	AluSx1
CAediting_1081638	chr16_3574086_-	SINE	Alu	AluSx1
CAediting_1081639	chr16_3574095_-	SINE	Alu	AluSx1
CAediting_1081640	chr16_3574099_-	SINE	Alu	AluSx1
CAediting_1081641	chr16_3574108_-	SINE	Alu	AluSx1
CAediting_1081642	chr16_3574112_-	SINE	Alu	AluSx1
CAediting_1081643	chr16_3574115_-	SINE	Alu	AluSx1
CAediting_1081644	chr16_3574119_-	SINE	Alu	AluSx1
CAediting_1081645	chr16_3574120_-	SINE	Alu	AluSx1
CAediting_1081646	chr16_3574125_-	SINE	Alu	AluSx1
CAediting_1081647	chr16_3574128_-	SINE	Alu	AluSx1
CAediting_1081648	chr16_3574147_-	SINE	Alu	AluSx1
CAediting_1081649	chr16_3574151_-	SINE	Alu	AluSx1
CAediting_1081650	chr16_3574155_-	SINE	Alu	AluSx1
CAediting_1081651	chr16_3574160_-	SINE	Alu	AluSx1
CAediting_1081652	chr16_3574163_-	SINE	Alu	AluSx1
CAediting_1081653	chr16_3574208_-	SINE	Alu	AluSx1
CAediting_1081654	chr16_3574210_-	SINE	Alu	AluSx1
CAediting_1081655	chr16_3574216_-	SINE	Alu	AluSx1
CAediting_1081656	chr16_3574218_-	SINE	Alu	AluSx1
CAediting_1081657	chr16_3574228_-	SINE	Alu	AluSx1
CAediting_1081658	chr16_3574233_-	SINE	Alu	AluSx1
CAediting_1081659	chr16_3574234_-	SINE	Alu	AluSx1
CAediting_1081660	chr16_3574242_-	SINE	Alu	AluSx1
CAediting_1081661	chr16_3574258_-	SINE	Alu	AluSx1
CAediting_1081662	chr16_3574263_-	SINE	Alu	AluSx1
CAediting_1081663	chr16_3574264_-	SINE	Alu	AluSx1
CAediting_1081664	chr16_3574698_-	SINE	Alu	AluSx1
CAediting_1081665	chr16_3574704_-	SINE	Alu	AluSx1
CAediting_1081666	chr16_3574710_-	SINE	Alu	AluSx1
CAediting_1081667	chr16_3574716_-	SINE	Alu	AluSx1
CAediting_1081668	chr16_3574770_-	SINE	Alu	AluSx1
CAediting_1081669	chr16_3574796_-	SINE	Alu	AluSx1
CAediting_1081670	chr16_3574827_-	SINE	Alu	AluSx1
CAediting_1081671	chr16_3574830_-	SINE	Alu	AluSx1
CAediting_1081672	chr16_3574840_-	SINE	Alu	AluSx1
CAediting_1081673	chr16_3574850_-	SINE	Alu	AluSx1
CAediting_1081674	chr16_3574862_-	SINE	Alu	AluSx1
CAediting_1081675	chr16_3574880_-	SINE	Alu	AluSx1
CAediting_1081676	chr16_3574885_-	SINE	Alu	AluSx1
CAediting_1081677	chr16_3574893_-	SINE	Alu	AluSx1
CAediting_1081678	chr16_3574900_-	SINE	Alu	AluSx1
CAediting_1081679	chr16_3574915_-	SINE	Alu	AluSx1
CAediting_1081680	chr16_3576651_-	SINE	Alu	AluSx1
CAediting_1081681	chr16_3576759_-	SINE	Alu	AluSx1
CAediting_1081682	chr16_3576804_-	SINE	Alu	AluSx1
CAediting_1081683	chr16_3576827_-	SINE	Alu	AluSx1
CAediting_1081684	chr16_3576831_-	SINE	Alu	AluSx1
CAediting_1081685	chr16_3576873_-	SINE	Alu	AluSx1
CAediting_1081686	chr16_3576921_-	SINE	Alu	AluSx1

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RNA A-to-I editing events in the alternative splicing sites for NLRC3

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000167984.15.NLRC3.

Correlation between RNA A-to-I editing and PSI for ENSG00000167984.15.NLRC3.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for NLRC3

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

LAML.CAediting_1081624.ENSG00000167984.NLRC3.png
Soverview

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Protein coding region RNA A-to-I editings for NLRC3

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for NLRC3

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1081469	chr16_3540695_-	ENSG00000167984.15	ENST00000359128	hsa-miR-6771-5p	3540694	3540700	7mer-m8	3540693	3540712	157.00	-34.66
CAediting_1081469	chr16_3540695_-	ENSG00000167984.15	ENST00000615877	hsa-miR-6771-5p	3540694	3540700	7mer-m8	3540693	3540712	157.00	-34.66
CAediting_1081470	chr16_3540734_-	ENSG00000167984.15	ENST00000359128	hsa-miR-1827	3540729	3540736	8mer-1a	3540729	3540745	145.00	-17.36
CAediting_1081470	chr16_3540734_-	ENSG00000167984.15	ENST00000359128	hsa-miR-1910-3p	3540731	3540737	7mer-m8	3540730	3540750	145.00	-19.28
CAediting_1081470	chr16_3540734_-	ENSG00000167984.15	ENST00000359128	hsa-miR-6511a-5p	3540731	3540737	7mer-m8	3540730	3540757	150.00	-22.00
CAediting_1081470	chr16_3540734_-	ENSG00000167984.15	ENST00000359128	hsa-miR-6511a-5p	3540731	3540737	7mer-m8	3540730	3540757	150.00	-22.00
CAediting_1081470	chr16_3540734_-	ENSG00000167984.15	ENST00000359128	hsa-miR-6511a-5p	3540731	3540737	7mer-m8	3540730	3540757	150.00	-22.00
CAediting_1081470	chr16_3540734_-	ENSG00000167984.15	ENST00000359128	hsa-miR-6511a-5p	3540731	3540737	7mer-m8	3540730	3540757	150.00	-22.00
CAediting_1081470	chr16_3540734_-	ENSG00000167984.15	ENST00000359128	hsa-miR-6765-5p	3540729	3540734	6mer	3540728	3540752	155.00	-30.49
CAediting_1081470	chr16_3540734_-	ENSG00000167984.15	ENST00000359128	hsa-miR-940	3540731	3540736	6mer	3540730	3540750	141.00	-20.07
CAediting_1081470	chr16_3540734_-	ENSG00000167984.15	ENST00000615877	hsa-miR-1827	3540729	3540736	8mer-1a	3540729	3540745	145.00	-17.36
CAediting_1081470	chr16_3540734_-	ENSG00000167984.15	ENST00000615877	hsa-miR-1910-3p	3540731	3540737	7mer-m8	3540730	3540750	145.00	-19.28
CAediting_1081470	chr16_3540734_-	ENSG00000167984.15	ENST00000615877	hsa-miR-6511a-5p	3540731	3540737	7mer-m8	3540730	3540757	150.00	-22.00
CAediting_1081470	chr16_3540734_-	ENSG00000167984.15	ENST00000615877	hsa-miR-6511a-5p	3540731	3540737	7mer-m8	3540730	3540757	150.00	-22.00
CAediting_1081470	chr16_3540734_-	ENSG00000167984.15	ENST00000615877	hsa-miR-6511a-5p	3540731	3540737	7mer-m8	3540730	3540757	150.00	-22.00
CAediting_1081470	chr16_3540734_-	ENSG00000167984.15	ENST00000615877	hsa-miR-6511a-5p	3540731	3540737	7mer-m8	3540730	3540757	150.00	-22.00
CAediting_1081470	chr16_3540734_-	ENSG00000167984.15	ENST00000615877	hsa-miR-6765-5p	3540729	3540734	6mer	3540728	3540752	155.00	-30.49
CAediting_1081470	chr16_3540734_-	ENSG00000167984.15	ENST00000615877	hsa-miR-940	3540731	3540736	6mer	3540730	3540750	141.00	-20.07
CAediting_1081471	chr16_3540791_-	ENSG00000167984.15	ENST00000359128	hsa-miR-340-3p	3540789	3540796	8mer-1a	3540789	3540809	150.00	-19.15
CAediting_1081471	chr16_3540791_-	ENSG00000167984.15	ENST00000359128	hsa-miR-6827-3p	3540789	3540796	8mer-1a	3540789	3540809	140.00	-14.67
CAediting_1081471	chr16_3540791_-	ENSG00000167984.15	ENST00000615877	hsa-miR-340-3p	3540789	3540796	8mer-1a	3540789	3540809	150.00	-19.15
CAediting_1081471	chr16_3540791_-	ENSG00000167984.15	ENST00000615877	hsa-miR-6827-3p	3540789	3540796	8mer-1a	3540789	3540809	140.00	-14.67
CAediting_1081472	chr16_3540932_-	ENSG00000167984.15	ENST00000359128	hsa-miR-4466	3540928	3540934	7mer-m8	3540927	3540944	140.00	-20.87
CAediting_1081472	chr16_3540932_-	ENSG00000167984.15	ENST00000359128	hsa-miR-675-5p	3540928	3540934	7mer-m8	3540927	3540949	142.00	-20.38
CAediting_1081472	chr16_3540932_-	ENSG00000167984.15	ENST00000615877	hsa-miR-4466	3540928	3540934	7mer-m8	3540927	3540944	140.00	-20.87
CAediting_1081472	chr16_3540932_-	ENSG00000167984.15	ENST00000615877	hsa-miR-675-5p	3540928	3540934	7mer-m8	3540927	3540949	142.00	-20.38
CAediting_1081474	chr16_3541179_-	ENSG00000167984.15	ENST00000359128	hsa-miR-3940-3p	3541175	3541181	7mer-m8	3541174	3541195	143.00	-19.68
CAediting_1081474	chr16_3541179_-	ENSG00000167984.15	ENST00000615877	hsa-miR-3940-3p	3541175	3541181	7mer-m8	3541174	3541195	143.00	-19.68
CAediting_1081473	chr16_3541039_-	ENSG00000167984.15	ENST00000359128	hsa-miR-6509-3p	3541037	3541042	6mer	3541036	3541057	147.00	-18.29
CAediting_1081473	chr16_3541039_-	ENSG00000167984.15	ENST00000615877	hsa-miR-6509-3p	3541037	3541042	6mer	3541036	3541057	147.00	-18.29

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1081470	chr16_3540734_-	ENSG00000167984.15	ENST00000359128	hsa-let-7a-5p	3540729	3540736	8mer-1a	3540729	3540749	151	-20.32
CAediting_1081470	chr16_3540734_-	ENSG00000167984.15	ENST00000359128	hsa-let-7a-5p	3540729	3540736	8mer-1a	3540729	3540749	151	-20.32
CAediting_1081470	chr16_3540734_-	ENSG00000167984.15	ENST00000359128	hsa-let-7a-5p	3540729	3540736	8mer-1a	3540729	3540749	151	-20.32
CAediting_1081470	chr16_3540734_-	ENSG00000167984.15	ENST00000359128	hsa-let-7b-5p	3540729	3540736	8mer-1a	3540729	3540750	153	-23.09
CAediting_1081470	chr16_3540734_-	ENSG00000167984.15	ENST00000359128	hsa-let-7c-5p	3540729	3540736	8mer-1a	3540729	3540750	153	-21.09
CAediting_1081470	chr16_3540734_-	ENSG00000167984.15	ENST00000359128	hsa-let-7d-5p	3540729	3540736	8mer-1a	3540729	3540749	155	-18.43
CAediting_1081470	chr16_3540734_-	ENSG00000167984.15	ENST00000359128	hsa-let-7e-5p	3540729	3540736	8mer-1a	3540729	3540749	151	-20.4
CAediting_1081470	chr16_3540734_-	ENSG00000167984.15	ENST00000359128	hsa-let-7f-5p	3540729	3540736	8mer-1a	3540729	3540749	151	-20.27
CAediting_1081470	chr16_3540734_-	ENSG00000167984.15	ENST00000359128	hsa-let-7f-5p	3540729	3540736	8mer-1a	3540729	3540749	151	-20.27
CAediting_1081470	chr16_3540734_-	ENSG00000167984.15	ENST00000359128	hsa-let-7g-5p	3540729	3540736	8mer-1a	3540729	3540749	155	-23.19
CAediting_1081469	chr16_3540695_-	ENSG00000167984.15	ENST00000359128	hsa-miR-12126	3540691	3540698	8mer-1a	3540691	3540714	147	-16.4
CAediting_1081474	chr16_3541179_-	ENSG00000167984.15	ENST00000359128	hsa-miR-1285-3p	3541178	3541183	6mer	3541177	3541199	155	-31.4
CAediting_1081474	chr16_3541179_-	ENSG00000167984.15	ENST00000359128	hsa-miR-1285-3p	3541178	3541183	6mer	3541177	3541199	155	-31.4
CAediting_1081469	chr16_3540695_-	ENSG00000167984.15	ENST00000359128	hsa-miR-30b-3p	3540694	3540701	8mer-1a	3540694	3540715	151	-17.42
CAediting_1081469	chr16_3540695_-	ENSG00000167984.15	ENST00000359128	hsa-miR-3689a-3p	3540694	3540701	8mer-1a	3540694	3540714	143	-18.55
CAediting_1081469	chr16_3540695_-	ENSG00000167984.15	ENST00000359128	hsa-miR-3689b-3p	3540694	3540701	8mer-1a	3540694	3540714	143	-17.11
CAediting_1081469	chr16_3540695_-	ENSG00000167984.15	ENST00000359128	hsa-miR-3689c	3540694	3540701	8mer-1a	3540694	3540714	143	-17.11
CAediting_1081470	chr16_3540734_-	ENSG00000167984.15	ENST00000359128	hsa-miR-3927-3p	3540731	3540737	7mer-m8	3540730	3540752	143	-12.38
CAediting_1081470	chr16_3540734_-	ENSG00000167984.15	ENST00000359128	hsa-miR-4451	3540732	3540738	7mer-m8	3540731	3540747	148	-16.72
CAediting_1081470	chr16_3540734_-	ENSG00000167984.15	ENST00000359128	hsa-miR-4458	3540729	3540736	8mer-1a	3540729	3540748	142	-15.6
CAediting_1081474	chr16_3541179_-	ENSG00000167984.15	ENST00000359128	hsa-miR-4486	3541178	3541184	7mer-m8	3541177	3541193	145	-19.43
CAediting_1081470	chr16_3540734_-	ENSG00000167984.15	ENST00000359128	hsa-miR-4500	3540729	3540736	8mer-1a	3540729	3540744	148	-17.27
CAediting_1081470	chr16_3540734_-	ENSG00000167984.15	ENST00000359128	hsa-miR-4732-5p	3540733	3540739	7mer-m8	3540732	3540758	151	-19.38
CAediting_1081471	chr16_3540791_-	ENSG00000167984.15	ENST00000359128	hsa-miR-4743-3p	3540788	3540794	7mer-m8	3540787	3540807	146	-11.81
CAediting_1081471	chr16_3540791_-	ENSG00000167984.15	ENST00000359128	hsa-miR-4778-5p	3540787	3540793	7mer-m8	3540786	3540807	152	-10.71
CAediting_1081473	chr16_3541039_-	ENSG00000167984.15	ENST00000359128	hsa-miR-593-3p	3541034	3541039	6mer	3541033	3541051	144	-21.7
CAediting_1081474	chr16_3541179_-	ENSG00000167984.15	ENST00000359128	hsa-miR-661	3541176	3541182	7mer-m8	3541175	3541198	145	-24.51
CAediting_1081469	chr16_3540695_-	ENSG00000167984.15	ENST00000359128	hsa-miR-6779-5p	3540694	3540701	8mer-1a	3540694	3540712	144	-21.93
CAediting_1081469	chr16_3540695_-	ENSG00000167984.15	ENST00000359128	hsa-miR-6780a-5p	3540694	3540701	8mer-1a	3540694	3540717	152	-26.46
CAediting_1081471	chr16_3540791_-	ENSG00000167984.15	ENST00000359128	hsa-miR-6888-3p	3540788	3540795	8mer-1a	3540788	3540808	151	-15.24
CAediting_1081469	chr16_3540695_-	ENSG00000167984.15	ENST00000359128	hsa-miR-887-5p	3540694	3540700	7mer-m8	3540693	3540714	148	-20.6
CAediting_1081474	chr16_3541179_-	ENSG00000167984.15	ENST00000359128	hsa-miR-939-3p	3541177	3541183	7mer-m8	3541176	3541196	140	-15.42
CAediting_1081470	chr16_3540734_-	ENSG00000167984.15	ENST00000359128	hsa-miR-98-5p	3540729	3540736	8mer-1a	3540729	3540749	150	-16.56
CAediting_1081470	chr16_3540734_-	ENSG00000167984.15	ENST00000615877	hsa-let-7a-5p	3540729	3540736	8mer-1a	3540729	3540749	151	-20.32
CAediting_1081470	chr16_3540734_-	ENSG00000167984.15	ENST00000615877	hsa-let-7a-5p	3540729	3540736	8mer-1a	3540729	3540749	151	-20.32
CAediting_1081470	chr16_3540734_-	ENSG00000167984.15	ENST00000615877	hsa-let-7a-5p	3540729	3540736	8mer-1a	3540729	3540749	151	-20.32
CAediting_1081470	chr16_3540734_-	ENSG00000167984.15	ENST00000615877	hsa-let-7b-5p	3540729	3540736	8mer-1a	3540729	3540750	153	-23.09
CAediting_1081470	chr16_3540734_-	ENSG00000167984.15	ENST00000615877	hsa-let-7c-5p	3540729	3540736	8mer-1a	3540729	3540750	153	-21.09
CAediting_1081470	chr16_3540734_-	ENSG00000167984.15	ENST00000615877	hsa-let-7d-5p	3540729	3540736	8mer-1a	3540729	3540749	155	-18.43
CAediting_1081470	chr16_3540734_-	ENSG00000167984.15	ENST00000615877	hsa-let-7e-5p	3540729	3540736	8mer-1a	3540729	3540749	151	-20.4
CAediting_1081470	chr16_3540734_-	ENSG00000167984.15	ENST00000615877	hsa-let-7f-5p	3540729	3540736	8mer-1a	3540729	3540749	151	-20.27
CAediting_1081470	chr16_3540734_-	ENSG00000167984.15	ENST00000615877	hsa-let-7f-5p	3540729	3540736	8mer-1a	3540729	3540749	151	-20.27
CAediting_1081470	chr16_3540734_-	ENSG00000167984.15	ENST00000615877	hsa-let-7g-5p	3540729	3540736	8mer-1a	3540729	3540749	155	-23.19
CAediting_1081469	chr16_3540695_-	ENSG00000167984.15	ENST00000615877	hsa-miR-12126	3540691	3540698	8mer-1a	3540691	3540714	147	-16.4
CAediting_1081474	chr16_3541179_-	ENSG00000167984.15	ENST00000615877	hsa-miR-1285-3p	3541178	3541183	6mer	3541177	3541199	155	-31.4
CAediting_1081474	chr16_3541179_-	ENSG00000167984.15	ENST00000615877	hsa-miR-1285-3p	3541178	3541183	6mer	3541177	3541199	155	-31.4
CAediting_1081469	chr16_3540695_-	ENSG00000167984.15	ENST00000615877	hsa-miR-30b-3p	3540694	3540701	8mer-1a	3540694	3540715	151	-17.42
CAediting_1081469	chr16_3540695_-	ENSG00000167984.15	ENST00000615877	hsa-miR-3689a-3p	3540694	3540701	8mer-1a	3540694	3540714	143	-18.55
CAediting_1081469	chr16_3540695_-	ENSG00000167984.15	ENST00000615877	hsa-miR-3689b-3p	3540694	3540701	8mer-1a	3540694	3540714	143	-17.11
CAediting_1081469	chr16_3540695_-	ENSG00000167984.15	ENST00000615877	hsa-miR-3689c	3540694	3540701	8mer-1a	3540694	3540714	143	-17.11
CAediting_1081470	chr16_3540734_-	ENSG00000167984.15	ENST00000615877	hsa-miR-3927-3p	3540731	3540737	7mer-m8	3540730	3540752	143	-12.38
CAediting_1081470	chr16_3540734_-	ENSG00000167984.15	ENST00000615877	hsa-miR-4451	3540732	3540738	7mer-m8	3540731	3540747	148	-16.72
CAediting_1081470	chr16_3540734_-	ENSG00000167984.15	ENST00000615877	hsa-miR-4458	3540729	3540736	8mer-1a	3540729	3540748	142	-15.6
CAediting_1081474	chr16_3541179_-	ENSG00000167984.15	ENST00000615877	hsa-miR-4486	3541178	3541184	7mer-m8	3541177	3541193	145	-19.43
CAediting_1081470	chr16_3540734_-	ENSG00000167984.15	ENST00000615877	hsa-miR-4500	3540729	3540736	8mer-1a	3540729	3540744	148	-17.27
CAediting_1081470	chr16_3540734_-	ENSG00000167984.15	ENST00000615877	hsa-miR-4732-5p	3540733	3540739	7mer-m8	3540732	3540758	151	-19.38
CAediting_1081471	chr16_3540791_-	ENSG00000167984.15	ENST00000615877	hsa-miR-4743-3p	3540788	3540794	7mer-m8	3540787	3540807	146	-11.81
CAediting_1081471	chr16_3540791_-	ENSG00000167984.15	ENST00000615877	hsa-miR-4778-5p	3540787	3540793	7mer-m8	3540786	3540807	152	-10.71
CAediting_1081473	chr16_3541039_-	ENSG00000167984.15	ENST00000615877	hsa-miR-593-3p	3541034	3541039	6mer	3541033	3541051	144	-21.7
CAediting_1081474	chr16_3541179_-	ENSG00000167984.15	ENST00000615877	hsa-miR-661	3541176	3541182	7mer-m8	3541175	3541198	145	-24.51
CAediting_1081469	chr16_3540695_-	ENSG00000167984.15	ENST00000615877	hsa-miR-6779-5p	3540694	3540701	8mer-1a	3540694	3540712	144	-21.93
CAediting_1081469	chr16_3540695_-	ENSG00000167984.15	ENST00000615877	hsa-miR-6780a-5p	3540694	3540701	8mer-1a	3540694	3540717	152	-26.46
CAediting_1081471	chr16_3540791_-	ENSG00000167984.15	ENST00000615877	hsa-miR-6888-3p	3540788	3540795	8mer-1a	3540788	3540808	151	-15.24
CAediting_1081469	chr16_3540695_-	ENSG00000167984.15	ENST00000615877	hsa-miR-887-5p	3540694	3540700	7mer-m8	3540693	3540714	148	-20.6
CAediting_1081474	chr16_3541179_-	ENSG00000167984.15	ENST00000615877	hsa-miR-939-3p	3541177	3541183	7mer-m8	3541176	3541196	140	-15.42
CAediting_1081470	chr16_3540734_-	ENSG00000167984.15	ENST00000615877	hsa-miR-98-5p	3540729	3540736	8mer-1a	3540729	3540749	150	-16.56

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_748296	chr10_51299626_+	ENSG00000167984.15	ENST00000615877	hsa-miR-605-3p	3549171	3549177	7mer-m8	3549170	3549190	147	-19.39
CAediting_1229414	chr17_67471546_+	ENSG00000167984.15	ENST00000359128	hsa-miR-548aa	3540601	3540607	7mer-m8	3540600	3540624	140	-13.12
CAediting_1160181	chr17_7017644_-	ENSG00000167984.15	ENST00000359128	hsa-miR-195-3p	3539882	3539888	7mer-m8	3539881	3539902	147	-11.84
CAediting_86358	chr1_109598906_+	ENSG00000167984.15	ENST00000359128	hsa-miR-197-5p	3540573	3540580	8mer-1a	3540573	3540601	146	-26.62
CAediting_396018	chr5_1062918_-	ENSG00000167984.15	ENST00000359128	hsa-miR-4635	3540584	3540590	7mer-m8	3540583	3540603	162	-21.04
CAediting_396018	chr5_1062918_-	ENSG00000167984.15	ENST00000359128	hsa-miR-4635	3541408	3541414	7mer-m8	3541407	3541429	147	-15.9
CAediting_442554	chr5_154685830_+	ENSG00000167984.15	ENST00000359128	hsa-miR-1303	3541232	3541238	7mer-m8	3541231	3541249	152	-18.29
CAediting_580943	chr7_100356700_+	ENSG00000167984.15	ENST00000359128	hsa-miR-6840-3p	3541127	3541133	7mer-m8	3541126	3541151	147	-29.11
CAediting_524911	chr7_5495852_-	ENSG00000167984.15	ENST00000359128	hsa-miR-589-3p	3539633	3539639	7mer-m8	3539632	3539655	140	-14.07
CAediting_524911	chr7_5495852_-	ENSG00000167984.15	ENST00000359128	hsa-miR-589-3p	3541427	3541434	8mer-1a	3541427	3541450	146	-14.11
CAediting_524911	chr7_5495852_-	ENSG00000167984.15	ENST00000615877	hsa-miR-589-3p	3542720	3542727	8mer-1a	3542720	3542743	160	-23.49
CAediting_1229414	chr17_67471546_+	ENSG00000167984.15	ENST00000615877	hsa-miR-548aa	3540601	3540607	7mer-m8	3540600	3540624	140	-13.12
CAediting_1160181	chr17_7017644_-	ENSG00000167984.15	ENST00000615877	hsa-miR-195-3p	3539882	3539888	7mer-m8	3539881	3539902	147	-11.84
CAediting_86358	chr1_109598906_+	ENSG00000167984.15	ENST00000615877	hsa-miR-197-5p	3540573	3540580	8mer-1a	3540573	3540601	146	-26.62
CAediting_396018	chr5_1062918_-	ENSG00000167984.15	ENST00000615877	hsa-miR-4635	3540584	3540590	7mer-m8	3540583	3540603	162	-21.04
CAediting_396018	chr5_1062918_-	ENSG00000167984.15	ENST00000615877	hsa-miR-4635	3541408	3541414	7mer-m8	3541407	3541429	147	-15.9
CAediting_442554	chr5_154685830_+	ENSG00000167984.15	ENST00000615877	hsa-miR-1303	3541232	3541238	7mer-m8	3541231	3541249	152	-18.29
CAediting_580943	chr7_100356700_+	ENSG00000167984.15	ENST00000615877	hsa-miR-6840-3p	3541127	3541133	7mer-m8	3541126	3541151	147	-29.11
CAediting_524911	chr7_5495852_-	ENSG00000167984.15	ENST00000615877	hsa-miR-589-3p	3539633	3539639	7mer-m8	3539632	3539655	140	-14.07
CAediting_524911	chr7_5495852_-	ENSG00000167984.15	ENST00000615877	hsa-miR-589-3p	3541427	3541434	8mer-1a	3541427	3541450	146	-14.11
CAediting_468389	chr6_31355314_-	ENSG00000167984.15	ENST00000615877	hsa-miR-6891-5p	3549704	3549711	8mer-1a	3549704	3549722	145	-24.71
CAediting_1524209	chrX_134546392_-	ENSG00000167984.15	ENST00000615877	hsa-miR-503-5p	3548185	3548191	7mer-m8	3548184	3548206	140	-17.86

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1368054	chr19_46709310_-	ENSG00000167984.15	ENST00000359128	hsa-miR-320e	3541520	3541526	7mer-m8	3541519	3541536	146	-16.14
CAediting_396018	chr5_1062918_-	ENSG00000167984.15	ENST00000359128	hsa-miR-4635	3539444	3539450	7mer-m8	3539443	3539463	140	-8.78
CAediting_1524209	chrX_134546392_-	ENSG00000167984.15	ENST00000359128	hsa-miR-503-5p	3541723	3541729	7mer-m8	3541722	3541744	155	-28.66
CAediting_1368054	chr19_46709310_-	ENSG00000167984.15	ENST00000615877	hsa-miR-320e	3548137	3548144	8mer-1a	3548137	3548152	147	-14.08
CAediting_1368054	chr19_46709310_-	ENSG00000167984.15	ENST00000615877	hsa-miR-320e	3541520	3541526	7mer-m8	3541519	3541536	146	-16.14
CAediting_396018	chr5_1062918_-	ENSG00000167984.15	ENST00000615877	hsa-miR-4635	3539444	3539450	7mer-m8	3539443	3539463	140	-8.78
CAediting_1524209	chrX_134546392_-	ENSG00000167984.15	ENST00000615877	hsa-miR-503-5p	3541723	3541729	7mer-m8	3541722	3541744	155	-28.66

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for NLRC3

- RNA A-to-I editing in mRNA.
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ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for NLRC3

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

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Relation with cancer stages for NLRC3

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for NLRC3

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for NLRC3

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for NLRC3

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
NLRC3	C2239176	Liver carcinoma	1	CTD_human

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene