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Editing gene: ZFC3H1 (CAeditome ID:196441)

Gene summary for ZFC3H1

Gene summary

Gene information	Gene symbol	ZFC3H1
	Gene ID	196441
	Gene name	zinc finger C3H1-type containing
	Synonyms	CCDC131\|CSRC2\|PSRC2
	Cytomap	12q21.1
	Type of gene	protein-coding
	Description	zinc finger C3H1 domain-containing proteincoiled-coil domain containing 131coiled-coil domain-containing protein 131proline/serine-rich coiled-coil 2proline/serine-rich coiled-coil protein 2
	Modification date	20210518
	UniProtAcc	O60293
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
ZFC3H1	GO:0005730	Zinc finger C3H1 domain-containing protein	27871484
ZFC3H1	GO:0005634	Zinc finger C3H1 domain-containing protein	27871484
ZFC3H1	GO:0000178	Zinc finger C3H1 domain-containing protein	27871484

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RNA A-to-I events for ZFC3H1

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000133858.14

RNA A-to-I editing events in Cancer.

CAediting_909743(71615613, -), CAediting_909744(71615619, -), CAediting_909745(71615622, -), CAediting_909746(71615682, -), CAediting_909747(71615685, -), CAediting_909748(71615686, -), CAediting_909749(71615687, -), CAediting_909750(71615688, -), CAediting_909751(71615691, -), CAediting_909752(71615693, -), CAediting_909753(71615736, -), CAediting_909754(71615755, -), CAediting_909755(71615764, -), CAediting_909756(71615790, -), CAediting_909757(71615791, -), CAediting_909758(71615804, -), CAediting_909759(71616020, -), CAediting_909760(71616046, -), CAediting_909761(71616055, -), CAediting_909762(71616072, -), CAediting_909763(71616102, -), CAediting_909764(71616114, -), CAediting_909765(71616150, -), CAediting_909766(71616163, -), CAediting_909767(71616174, -), CAediting_909768(71616186, -), CAediting_909769(71616210, -), CAediting_909770(71616220, -), CAediting_909771(71616234, -), CAediting_909772(71616240, -), CAediting_909773(71616245, -), CAediting_909774(71616250, -), CAediting_909775(71616283, -), CAediting_909776(71616291, -), CAediting_909777(71616296, -), CAediting_909778(71618182, -), CAediting_909779(71618183, -), CAediting_909780(71621409, -), CAediting_909781(71621432, -), CAediting_909782(71621497, -), CAediting_909783(71622472, -), CAediting_909784(71622714, -), CAediting_909785(71622727, -), CAediting_909786(71642043, -), CAediting_909787(71642156, -), CAediting_909788(71643228, -), CAediting_909789(71657732, -), CAediting_909790(71657744, -), CAediting_909791(71657771, -), CAediting_909792(71657786, -), CAediting_909793(71657823, -), CAediting_909794(71657826, -), CAediting_909795(71657867, -), CAediting_909796(71657880, -), CAediting_909797(71657881, -), CAediting_909798(71657903, -), CAediting_909799(71657906, -), CAediting_909800(71657907, -), CAediting_909801(71657912, -), CAediting_909802(71657927, -), CAediting_909803(71658354, -), CAediting_909804(71658356, -), CAediting_909805(71658361, -), CAediting_909806(71658365, -), CAediting_909807(71658372, -), CAediting_909808(71658376, -), CAediting_909809(71658378, -), CAediting_909810(71658386, -), CAediting_909811(71658394, -), CAediting_909812(71658395, -), CAediting_909813(71658400, -), CAediting_909814(71658413, -), CAediting_909815(71658421, -), CAediting_909816(71658426, -), CAediting_909817(71658427, -), CAediting_909818(71658445, -), CAediting_909819(71658453, -), CAediting_909820(71658456, -), CAediting_909821(71658457, -), CAediting_909822(71658458, -), CAediting_909823(71658459, -), CAediting_909824(71658462, -), CAediting_909825(71658464, -), CAediting_909826(71658465, -), CAediting_909827(71658466, -), CAediting_909828(71658467, -), CAediting_909829(71658468, -), CAediting_909830(71658482, -), CAediting_909831(71658483, -), CAediting_909832(71658484, -), CAediting_909833(71658492, -), CAediting_909834(71658502, -), CAediting_909835(71658505, -), CAediting_909836(71658507, -), CAediting_909837(71658508, -), CAediting_909838(71658516, -), CAediting_909839(71658526, -), CAediting_909840(71658539, -), CAediting_909841(71658540, -), CAediting_909842(71658545, -), CAediting_909843(71658561, -), CAediting_909844(71658562, -), CAediting_909845(71658568, -), CAediting_909846(71658570, -), CAediting_909847(71658578, -), CAediting_909848(71660878, -), CAediting_909849(71660895, -), CAediting_909850(71661059, -), CAediting_909851(71661110, -), CAediting_909852(71661114, -), CAediting_909853(71661130, -), CAediting_909854(71661136, -), CAediting_909855(71661179, -), CAediting_909856(71661181, -), CAediting_909857(71661191, -), CAediting_909858(71661203, -), CAediting_909859(71661517, -), CAediting_909860(71661540, -), CAediting_909861(71661552, -), CAediting_909862(71661555, -), CAediting_909863(71661567, -), CAediting_909864(71661578, -), CAediting_909865(71661597, -), CAediting_909866(71661610, -), CAediting_909867(71661614, -), CAediting_909868(71661620, -), CAediting_909869(71661642, -), CAediting_909870(71661646, -), CAediting_909871(71661650, -), CAediting_909872(71661651, -), CAediting_909873(71661652, -), CAediting_909874(71661653, -), CAediting_909875(71661654, -), CAediting_909876(71661655, -), CAediting_909877(71661657, -), CAediting_909878(71661658, -), CAediting_909879(71661659, -), CAediting_909880(71661660, -), CAediting_909881(71661661, -), CAediting_909882(71661664, -), CAediting_909883(71661675, -), CAediting_909884(71661676, -), CAediting_909885(71661683, -), CAediting_909886(71661685, -), CAediting_909887(71661686, -), CAediting_909888(71661695, -), CAediting_909889(71661700, -), CAediting_909890(71661709, -), CAediting_909891(71661739, -), CAediting_909892(71661745, -), CAediting_909893(71661747, -), CAediting_909894(71661753, -), CAediting_909895(71661754, -), CAediting_909896(71661776, -),

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RNA editing positional annotations for ZFC3H1 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_909743	chr12_71615613_-	ncRNA_intronic
CAediting_909744	chr12_71615619_-	ncRNA_intronic
CAediting_909745	chr12_71615622_-	ncRNA_intronic
CAediting_909746	chr12_71615682_-	ncRNA_intronic
CAediting_909747	chr12_71615685_-	ncRNA_intronic
CAediting_909748	chr12_71615686_-	ncRNA_intronic
CAediting_909749	chr12_71615687_-	ncRNA_intronic
CAediting_909750	chr12_71615688_-	ncRNA_intronic
CAediting_909751	chr12_71615691_-	ncRNA_intronic
CAediting_909752	chr12_71615693_-	ncRNA_intronic
CAediting_909753	chr12_71615736_-	ncRNA_intronic
CAediting_909754	chr12_71615755_-	ncRNA_intronic
CAediting_909755	chr12_71615764_-	ncRNA_intronic
CAediting_909756	chr12_71615790_-	ncRNA_intronic
CAediting_909757	chr12_71615791_-	ncRNA_intronic
CAediting_909758	chr12_71615804_-	ncRNA_intronic
CAediting_909759	chr12_71616020_-	ncRNA_intronic
CAediting_909760	chr12_71616046_-	ncRNA_intronic
CAediting_909761	chr12_71616055_-	ncRNA_intronic
CAediting_909762	chr12_71616072_-	ncRNA_intronic
CAediting_909763	chr12_71616102_-	ncRNA_intronic
CAediting_909764	chr12_71616114_-	ncRNA_intronic
CAediting_909765	chr12_71616150_-	ncRNA_intronic
CAediting_909766	chr12_71616163_-	ncRNA_intronic
CAediting_909767	chr12_71616174_-	ncRNA_intronic
CAediting_909768	chr12_71616186_-	ncRNA_intronic
CAediting_909769	chr12_71616210_-	ncRNA_intronic
CAediting_909770	chr12_71616220_-	ncRNA_intronic
CAediting_909771	chr12_71616234_-	ncRNA_intronic
CAediting_909772	chr12_71616240_-	ncRNA_intronic
CAediting_909773	chr12_71616245_-	ncRNA_intronic
CAediting_909774	chr12_71616250_-	ncRNA_intronic
CAediting_909775	chr12_71616283_-	ncRNA_intronic
CAediting_909776	chr12_71616291_-	ncRNA_intronic
CAediting_909777	chr12_71616296_-	ncRNA_intronic
CAediting_909778	chr12_71618182_-	ncRNA_intronic
CAediting_909779	chr12_71618183_-	ncRNA_intronic
CAediting_909780	chr12_71621409_-	intronic
CAediting_909781	chr12_71621432_-	intronic
CAediting_909782	chr12_71621497_-	intronic
CAediting_909783	chr12_71622472_-	intronic
CAediting_909784	chr12_71622714_-	intronic
CAediting_909785	chr12_71622727_-	intronic
CAediting_909786	chr12_71642043_-	intronic
CAediting_909787	chr12_71642156_-	intronic
CAediting_909788	chr12_71643228_-	intronic
CAediting_909789	chr12_71657732_-	ncRNA_intronic
CAediting_909790	chr12_71657744_-	ncRNA_intronic
CAediting_909791	chr12_71657771_-	ncRNA_intronic
CAediting_909792	chr12_71657786_-	ncRNA_intronic
CAediting_909793	chr12_71657823_-	ncRNA_intronic
CAediting_909794	chr12_71657826_-	ncRNA_intronic
CAediting_909795	chr12_71657867_-	ncRNA_intronic
CAediting_909796	chr12_71657880_-	ncRNA_intronic
CAediting_909797	chr12_71657881_-	ncRNA_intronic
CAediting_909798	chr12_71657903_-	ncRNA_intronic
CAediting_909799	chr12_71657906_-	ncRNA_intronic
CAediting_909800	chr12_71657907_-	ncRNA_intronic
CAediting_909801	chr12_71657912_-	ncRNA_intronic
CAediting_909802	chr12_71657927_-	ncRNA_intronic
CAediting_909803	chr12_71658354_-	ncRNA_intronic
CAediting_909804	chr12_71658356_-	ncRNA_intronic
CAediting_909805	chr12_71658361_-	ncRNA_intronic
CAediting_909806	chr12_71658365_-	ncRNA_intronic
CAediting_909807	chr12_71658372_-	ncRNA_intronic
CAediting_909808	chr12_71658376_-	ncRNA_intronic
CAediting_909809	chr12_71658378_-	ncRNA_intronic
CAediting_909810	chr12_71658386_-	ncRNA_intronic
CAediting_909811	chr12_71658394_-	ncRNA_intronic
CAediting_909812	chr12_71658395_-	ncRNA_intronic
CAediting_909813	chr12_71658400_-	ncRNA_intronic
CAediting_909814	chr12_71658413_-	ncRNA_intronic
CAediting_909815	chr12_71658421_-	ncRNA_intronic
CAediting_909816	chr12_71658426_-	ncRNA_intronic
CAediting_909817	chr12_71658427_-	ncRNA_intronic
CAediting_909818	chr12_71658445_-	ncRNA_intronic
CAediting_909819	chr12_71658453_-	ncRNA_intronic
CAediting_909820	chr12_71658456_-	ncRNA_intronic
CAediting_909821	chr12_71658457_-	ncRNA_intronic
CAediting_909822	chr12_71658458_-	ncRNA_intronic
CAediting_909823	chr12_71658459_-	ncRNA_intronic
CAediting_909824	chr12_71658462_-	ncRNA_intronic
CAediting_909825	chr12_71658464_-	ncRNA_intronic
CAediting_909826	chr12_71658465_-	ncRNA_intronic
CAediting_909827	chr12_71658466_-	ncRNA_intronic
CAediting_909828	chr12_71658467_-	ncRNA_intronic
CAediting_909829	chr12_71658468_-	ncRNA_intronic
CAediting_909830	chr12_71658482_-	ncRNA_intronic
CAediting_909831	chr12_71658483_-	ncRNA_intronic
CAediting_909832	chr12_71658484_-	ncRNA_intronic
CAediting_909833	chr12_71658492_-	ncRNA_intronic
CAediting_909834	chr12_71658502_-	ncRNA_intronic
CAediting_909835	chr12_71658505_-	ncRNA_intronic
CAediting_909836	chr12_71658507_-	ncRNA_intronic
CAediting_909837	chr12_71658508_-	ncRNA_intronic
CAediting_909838	chr12_71658516_-	ncRNA_intronic
CAediting_909839	chr12_71658526_-	ncRNA_intronic
CAediting_909840	chr12_71658539_-	ncRNA_intronic
CAediting_909841	chr12_71658540_-	ncRNA_intronic
CAediting_909842	chr12_71658545_-	ncRNA_intronic
CAediting_909843	chr12_71658561_-	ncRNA_intronic
CAediting_909844	chr12_71658562_-	ncRNA_intronic
CAediting_909845	chr12_71658568_-	ncRNA_intronic
CAediting_909846	chr12_71658570_-	ncRNA_intronic
CAediting_909847	chr12_71658578_-	ncRNA_intronic
CAediting_909848	chr12_71660878_-	ncRNA_intronic
CAediting_909849	chr12_71660895_-	ncRNA_intronic
CAediting_909850	chr12_71661059_-	ncRNA_intronic
CAediting_909851	chr12_71661110_-	ncRNA_intronic
CAediting_909852	chr12_71661114_-	ncRNA_intronic
CAediting_909853	chr12_71661130_-	ncRNA_intronic
CAediting_909854	chr12_71661136_-	ncRNA_intronic
CAediting_909855	chr12_71661179_-	ncRNA_intronic
CAediting_909856	chr12_71661181_-	ncRNA_intronic
CAediting_909857	chr12_71661191_-	ncRNA_intronic
CAediting_909858	chr12_71661203_-	ncRNA_intronic
CAediting_909859	chr12_71661517_-	ncRNA_intronic
CAediting_909860	chr12_71661540_-	ncRNA_intronic
CAediting_909861	chr12_71661552_-	ncRNA_intronic
CAediting_909862	chr12_71661555_-	ncRNA_intronic
CAediting_909863	chr12_71661567_-	ncRNA_intronic
CAediting_909864	chr12_71661578_-	ncRNA_intronic
CAediting_909865	chr12_71661597_-	ncRNA_intronic
CAediting_909866	chr12_71661610_-	ncRNA_intronic
CAediting_909867	chr12_71661614_-	ncRNA_intronic
CAediting_909868	chr12_71661620_-	ncRNA_intronic
CAediting_909869	chr12_71661642_-	ncRNA_intronic
CAediting_909870	chr12_71661646_-	ncRNA_intronic
CAediting_909871	chr12_71661650_-	ncRNA_intronic
CAediting_909872	chr12_71661651_-	ncRNA_intronic
CAediting_909873	chr12_71661652_-	ncRNA_intronic
CAediting_909874	chr12_71661653_-	ncRNA_intronic
CAediting_909875	chr12_71661654_-	ncRNA_intronic
CAediting_909876	chr12_71661655_-	ncRNA_intronic
CAediting_909877	chr12_71661657_-	ncRNA_intronic
CAediting_909878	chr12_71661658_-	ncRNA_intronic
CAediting_909879	chr12_71661659_-	ncRNA_intronic
CAediting_909880	chr12_71661660_-	ncRNA_intronic
CAediting_909881	chr12_71661661_-	ncRNA_intronic
CAediting_909882	chr12_71661664_-	ncRNA_intronic
CAediting_909883	chr12_71661675_-	ncRNA_intronic
CAediting_909884	chr12_71661676_-	ncRNA_intronic
CAediting_909885	chr12_71661683_-	ncRNA_intronic
CAediting_909886	chr12_71661685_-	ncRNA_intronic
CAediting_909887	chr12_71661686_-	ncRNA_intronic
CAediting_909888	chr12_71661695_-	ncRNA_intronic
CAediting_909889	chr12_71661700_-	ncRNA_intronic
CAediting_909890	chr12_71661709_-	ncRNA_intronic
CAediting_909891	chr12_71661739_-	ncRNA_intronic
CAediting_909892	chr12_71661745_-	ncRNA_intronic
CAediting_909893	chr12_71661747_-	ncRNA_intronic
CAediting_909894	chr12_71661753_-	ncRNA_intronic
CAediting_909895	chr12_71661754_-	ncRNA_intronic
CAediting_909896	chr12_71661776_-	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_909743	chr12_71615613_-	SINE	Alu	AluSz6
CAediting_909744	chr12_71615619_-	SINE	Alu	AluSz6
CAediting_909745	chr12_71615622_-	SINE	Alu	AluSz6
CAediting_909746	chr12_71615682_-	SINE	Alu	AluSz6
CAediting_909747	chr12_71615685_-	SINE	Alu	AluSz6
CAediting_909748	chr12_71615686_-	SINE	Alu	AluSz6
CAediting_909749	chr12_71615687_-	SINE	Alu	AluSz6
CAediting_909750	chr12_71615688_-	SINE	Alu	AluSz6
CAediting_909751	chr12_71615691_-	SINE	Alu	AluSz6
CAediting_909752	chr12_71615693_-	SINE	Alu	AluSz6
CAediting_909753	chr12_71615736_-	SINE	Alu	AluSz6
CAediting_909754	chr12_71615755_-	SINE	Alu	AluSz6
CAediting_909755	chr12_71615764_-	SINE	Alu	AluSz6
CAediting_909756	chr12_71615790_-	SINE	Alu	AluSz6
CAediting_909757	chr12_71615791_-	SINE	Alu	AluSz6
CAediting_909758	chr12_71615804_-	SINE	Alu	AluSz6
CAediting_909759	chr12_71616020_-	SINE	Alu	AluSz
CAediting_909760	chr12_71616046_-	SINE	Alu	AluSz
CAediting_909761	chr12_71616055_-	SINE	Alu	AluSz
CAediting_909762	chr12_71616072_-	SINE	Alu	AluSz
CAediting_909763	chr12_71616102_-	SINE	Alu	AluSz
CAediting_909764	chr12_71616114_-	SINE	Alu	AluSz
CAediting_909765	chr12_71616150_-	SINE	Alu	AluSz
CAediting_909766	chr12_71616163_-	SINE	Alu	AluSz
CAediting_909767	chr12_71616174_-	SINE	Alu	AluSz
CAediting_909768	chr12_71616186_-	SINE	Alu	AluSz
CAediting_909769	chr12_71616210_-	SINE	Alu	AluSz
CAediting_909770	chr12_71616220_-	SINE	Alu	AluSz
CAediting_909771	chr12_71616234_-	SINE	Alu	AluSz
CAediting_909772	chr12_71616240_-	SINE	Alu	AluSz
CAediting_909773	chr12_71616245_-	SINE	Alu	AluSz
CAediting_909774	chr12_71616250_-	SINE	Alu	AluSz
CAediting_909775	chr12_71616283_-	SINE	Alu	AluSz
CAediting_909776	chr12_71616291_-	SINE	Alu	AluSz
CAediting_909777	chr12_71616296_-	SINE	Alu	AluSz
CAediting_909778	chr12_71618182_-	SINE	Alu	AluSx
CAediting_909779	chr12_71618183_-	SINE	Alu	AluSx
CAediting_909780	chr12_71621409_-	SINE	Alu	AluSz
CAediting_909781	chr12_71621432_-	SINE	Alu	AluSz
CAediting_909782	chr12_71621497_-	SINE	Alu	AluSz
CAediting_909783	chr12_71622472_-	SINE	Alu	AluSx
CAediting_909784	chr12_71622714_-	SINE	Alu	AluSx
CAediting_909785	chr12_71622727_-	SINE	Alu	AluSx
CAediting_909786	chr12_71642043_-	SINE	Alu	AluSz6
CAediting_909788	chr12_71643228_-	SINE	Alu	AluSq2
CAediting_909789	chr12_71657732_-	SINE	Alu	AluSz
CAediting_909790	chr12_71657744_-	SINE	Alu	AluSz
CAediting_909791	chr12_71657771_-	SINE	Alu	AluSz
CAediting_909792	chr12_71657786_-	SINE	Alu	AluSz
CAediting_909793	chr12_71657823_-	SINE	Alu	AluSz
CAediting_909794	chr12_71657826_-	SINE	Alu	AluSz
CAediting_909795	chr12_71657867_-	SINE	Alu	AluSz
CAediting_909796	chr12_71657880_-	SINE	Alu	AluSz
CAediting_909797	chr12_71657881_-	SINE	Alu	AluSz
CAediting_909798	chr12_71657903_-	SINE	Alu	AluSz
CAediting_909799	chr12_71657906_-	SINE	Alu	AluSz
CAediting_909800	chr12_71657907_-	SINE	Alu	AluSz
CAediting_909801	chr12_71657912_-	SINE	Alu	AluSz
CAediting_909802	chr12_71657927_-	SINE	Alu	AluSz
CAediting_909803	chr12_71658354_-	SINE	Alu	AluSx
CAediting_909804	chr12_71658356_-	SINE	Alu	AluSx
CAediting_909805	chr12_71658361_-	SINE	Alu	AluSx
CAediting_909806	chr12_71658365_-	SINE	Alu	AluSx
CAediting_909807	chr12_71658372_-	SINE	Alu	AluSx
CAediting_909808	chr12_71658376_-	SINE	Alu	AluSx
CAediting_909809	chr12_71658378_-	SINE	Alu	AluSx
CAediting_909810	chr12_71658386_-	SINE	Alu	AluSx
CAediting_909811	chr12_71658394_-	SINE	Alu	AluSx
CAediting_909812	chr12_71658395_-	SINE	Alu	AluSx
CAediting_909813	chr12_71658400_-	SINE	Alu	AluSx
CAediting_909814	chr12_71658413_-	SINE	Alu	AluSx
CAediting_909815	chr12_71658421_-	SINE	Alu	AluSx
CAediting_909816	chr12_71658426_-	SINE	Alu	AluSx
CAediting_909817	chr12_71658427_-	SINE	Alu	AluSx
CAediting_909818	chr12_71658445_-	SINE	Alu	AluSx
CAediting_909819	chr12_71658453_-	SINE	Alu	AluSx
CAediting_909820	chr12_71658456_-	SINE	Alu	AluSx
CAediting_909821	chr12_71658457_-	SINE	Alu	AluSx
CAediting_909822	chr12_71658458_-	SINE	Alu	AluSx
CAediting_909823	chr12_71658459_-	SINE	Alu	AluSx
CAediting_909824	chr12_71658462_-	SINE	Alu	AluSx
CAediting_909825	chr12_71658464_-	SINE	Alu	AluSx
CAediting_909826	chr12_71658465_-	SINE	Alu	AluSx
CAediting_909827	chr12_71658466_-	SINE	Alu	AluSx
CAediting_909828	chr12_71658467_-	SINE	Alu	AluSx
CAediting_909829	chr12_71658468_-	SINE	Alu	AluSx
CAediting_909830	chr12_71658482_-	SINE	Alu	AluSx
CAediting_909831	chr12_71658483_-	SINE	Alu	AluSx
CAediting_909832	chr12_71658484_-	SINE	Alu	AluSx
CAediting_909833	chr12_71658492_-	SINE	Alu	AluSx
CAediting_909834	chr12_71658502_-	SINE	Alu	AluSx
CAediting_909835	chr12_71658505_-	SINE	Alu	AluSx
CAediting_909836	chr12_71658507_-	SINE	Alu	AluSx
CAediting_909837	chr12_71658508_-	SINE	Alu	AluSx
CAediting_909838	chr12_71658516_-	SINE	Alu	AluSx
CAediting_909839	chr12_71658526_-	SINE	Alu	AluSx
CAediting_909840	chr12_71658539_-	SINE	Alu	AluSx
CAediting_909841	chr12_71658540_-	SINE	Alu	AluSx
CAediting_909842	chr12_71658545_-	SINE	Alu	AluSx
CAediting_909843	chr12_71658561_-	SINE	Alu	AluSx
CAediting_909844	chr12_71658562_-	SINE	Alu	AluSx
CAediting_909845	chr12_71658568_-	SINE	Alu	AluSx
CAediting_909846	chr12_71658570_-	SINE	Alu	AluSx
CAediting_909847	chr12_71658578_-	SINE	Alu	AluSx
CAediting_909848	chr12_71660878_-	SINE	Alu	AluJr
CAediting_909849	chr12_71660895_-	SINE	Alu	AluJr
CAediting_909850	chr12_71661059_-	SINE	Alu	AluY
CAediting_909851	chr12_71661110_-	SINE	Alu	AluY
CAediting_909852	chr12_71661114_-	SINE	Alu	AluY
CAediting_909853	chr12_71661130_-	SINE	Alu	AluY
CAediting_909854	chr12_71661136_-	SINE	Alu	AluY
CAediting_909855	chr12_71661179_-	SINE	Alu	AluY
CAediting_909856	chr12_71661181_-	SINE	Alu	AluY
CAediting_909857	chr12_71661191_-	SINE	Alu	AluY
CAediting_909858	chr12_71661203_-	SINE	Alu	AluY
CAediting_909859	chr12_71661517_-	SINE	Alu	AluSx1
CAediting_909860	chr12_71661540_-	SINE	Alu	AluSx1
CAediting_909861	chr12_71661552_-	SINE	Alu	AluSx1
CAediting_909862	chr12_71661555_-	SINE	Alu	AluSx1
CAediting_909863	chr12_71661567_-	SINE	Alu	AluSx1
CAediting_909864	chr12_71661578_-	SINE	Alu	AluSx1
CAediting_909865	chr12_71661597_-	SINE	Alu	AluSx1
CAediting_909866	chr12_71661610_-	SINE	Alu	AluSx1
CAediting_909867	chr12_71661614_-	SINE	Alu	AluSx1
CAediting_909868	chr12_71661620_-	SINE	Alu	AluSx1
CAediting_909869	chr12_71661642_-	SINE	Alu	AluSx1
CAediting_909870	chr12_71661646_-	SINE	Alu	AluSx1
CAediting_909871	chr12_71661650_-	SINE	Alu	AluSx1
CAediting_909872	chr12_71661651_-	SINE	Alu	AluSx1
CAediting_909873	chr12_71661652_-	SINE	Alu	AluSx1
CAediting_909874	chr12_71661653_-	SINE	Alu	AluSx1
CAediting_909875	chr12_71661654_-	SINE	Alu	AluSx1
CAediting_909876	chr12_71661655_-	SINE	Alu	AluSx1
CAediting_909877	chr12_71661657_-	SINE	Alu	AluSx1
CAediting_909878	chr12_71661658_-	SINE	Alu	AluSx1
CAediting_909879	chr12_71661659_-	SINE	Alu	AluSx1
CAediting_909880	chr12_71661660_-	SINE	Alu	AluSx1
CAediting_909881	chr12_71661661_-	SINE	Alu	AluSx1
CAediting_909882	chr12_71661664_-	SINE	Alu	AluSx1
CAediting_909883	chr12_71661675_-	SINE	Alu	AluSx1
CAediting_909884	chr12_71661676_-	SINE	Alu	AluSx1
CAediting_909885	chr12_71661683_-	SINE	Alu	AluSx1
CAediting_909886	chr12_71661685_-	SINE	Alu	AluSx1
CAediting_909887	chr12_71661686_-	SINE	Alu	AluSx1
CAediting_909888	chr12_71661695_-	SINE	Alu	AluSx1
CAediting_909889	chr12_71661700_-	SINE	Alu	AluSx1
CAediting_909890	chr12_71661709_-	SINE	Alu	AluSx1
CAediting_909891	chr12_71661739_-	SINE	Alu	AluSx1
CAediting_909892	chr12_71661745_-	SINE	Alu	AluSx1
CAediting_909893	chr12_71661747_-	SINE	Alu	AluSx1
CAediting_909894	chr12_71661753_-	SINE	Alu	AluSx1
CAediting_909895	chr12_71661754_-	SINE	Alu	AluSx1
CAediting_909896	chr12_71661776_-	SINE	Alu	AluSx1

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RNA A-to-I editing events in the alternative splicing sites for ZFC3H1

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000133858.14.ZFC3H1.

Correlation between RNA A-to-I editing and PSI for ENSG00000133858.14.ZFC3H1.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for ZFC3H1

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for ZFC3H1

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for ZFC3H1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_688080	chr9_63819626_+	ENSG00000133858.14	ENST00000552994	hsa-miR-4477b	71610276	71610283	8mer-1a	71610276	71610295	153	-16.51
CAediting_688080	chr9_63819626_+	ENSG00000133858.14	ENST00000552994	hsa-miR-4477b	71610161	71610168	8mer-1a	71610161	71610180	148	-12.58

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for ZFC3H1

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for ZFC3H1

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
STAD	CAediting_909886	chr12_71661685_-	.	.	.	.	0.00913292677828419	0.264781228840991

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Relation with cancer stages for ZFC3H1

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for ZFC3H1

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for ZFC3H1

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for ZFC3H1

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
ZFC3H1	C0087031	Juvenile-Onset Still Disease	1	CTD_human
ZFC3H1	C3495559	Juvenile arthritis	1	CTD_human
ZFC3H1	C3714758	Juvenile psoriatic arthritis	1	CTD_human
ZFC3H1	C4552091	Polyarthritis, Juvenile, Rheumatoid Factor Negative	1	CTD_human
ZFC3H1	C4704862	Polyarthritis, Juvenile, Rheumatoid Factor Positive	1	CTD_human

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene