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Editing gene: ECH1 (CAeditome ID:1891)

Gene summary for ECH1

Gene summary

Gene information	Gene symbol	ECH1
	Gene ID	1891
	Gene name	enoyl-CoA hydratase 1
	Synonyms	HPXEL
	Cytomap	19q13.2
	Type of gene	protein-coding
	Description	delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrialdelta3,5-delta2,4-dienoyl-CoA isomerasedelta3,5-delta2,4-dienoyl-coenzyme A isomerasedienoyl-CoA isomeraseenoyl Coenzyme A hydratase 1, peroxisomalenoyl-CoA hydratase 1, peroxisomalepididymis
	Modification date	20210522
	UniProtAcc	Q13011
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for ECH1

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000104823.7

RNA A-to-I editing events in Cancer.

CAediting_1348147(38817957, -), CAediting_1348148(38817960, -), CAediting_1348149(38817979, -), CAediting_1348150(38817990, -), CAediting_1348151(38817998, -), CAediting_1348152(38818018, -), CAediting_1348153(38818037, -), CAediting_1348154(38818085, -), CAediting_1348155(38818108, -), CAediting_1348156(38818109, -), CAediting_1348157(38818130, -), CAediting_1348158(38818137, -), CAediting_1348159(38818149, -), CAediting_1348160(38818505, -), CAediting_1348161(38818584, -), CAediting_1348162(38818590, -), CAediting_1348163(38818599, -), CAediting_1348164(38818625, -), CAediting_1348165(38818626, -), CAediting_1348166(38818652, -), CAediting_1348167(38818670, -), CAediting_1348168(38818684, -), CAediting_1348169(38818691, -), CAediting_1348170(38818720, -), CAediting_1348171(38818759, -), CAediting_1348172(38819054, -), CAediting_1348173(38819701, -), CAediting_1348174(38819702, -), CAediting_1348175(38819729, -), CAediting_1348176(38819735, -), CAediting_1348177(38819743, -), CAediting_1348178(38819775, -), CAediting_1348179(38819780, -), CAediting_1348180(38819802, -), CAediting_1348181(38819830, -), CAediting_1348182(38819852, -), CAediting_1348183(38819857, -), CAediting_1348184(38819868, -), CAediting_1348185(38819869, -), CAediting_1348186(38819870, -), CAediting_1348187(38819890, -), CAediting_1348188(38819900, -), CAediting_1348189(38819902, -), CAediting_1348190(38819905, -), CAediting_1348191(38819914, -), CAediting_1348192(38820113, -), CAediting_1348193(38820115, -), CAediting_1348194(38820128, -), CAediting_1348195(38820133, -), CAediting_1348196(38820137, -), CAediting_1348197(38827690, -), CAediting_1348198(38827703, -), CAediting_1348199(38827743, -), CAediting_1348200(38827749, -), CAediting_1348201(38827951, -), CAediting_1348202(38827993, -), CAediting_1348203(38827994, -), CAediting_1348204(38828038, -), CAediting_1348205(38828043, -), CAediting_1348206(38828045, -), CAediting_1348207(38828264, -), CAediting_1348208(38828294, -), CAediting_1348209(38828328, -), CAediting_1348210(38828329, -), CAediting_1348211(38828337, -), CAediting_1348212(38828338, -), CAediting_1348213(38828343, -), CAediting_1348214(38828369, -), CAediting_1348215(38828370, -), CAediting_1348216(38828399, -), CAediting_1348217(38828400, -), CAediting_1348218(38828410, -), CAediting_1348219(38828411, -), CAediting_1348220(38828435, -), CAediting_1348221(38828451, -), CAediting_1348222(38828505, -), CAediting_1348223(38828668, -), CAediting_1348224(38828701, -), CAediting_1348225(38828705, -), CAediting_1348226(38828713, -), CAediting_1348227(38828721, -), CAediting_1348228(38828727, -), CAediting_1348229(38828744, -), CAediting_1348230(38828748, -), CAediting_1348231(38828754, -), CAediting_1348232(38828772, -), CAediting_1348233(38828780, -), CAediting_1348234(38828816, -), CAediting_1348235(38828818, -), CAediting_1348236(38828826, -), CAediting_1348237(38828850, -), CAediting_1348238(38828867, -), CAediting_1348239(38828894, -), CAediting_1348240(38828902, -), CAediting_1348241(38828916, -), CAediting_1348242(38829028, -), CAediting_1348243(38829040, -), CAediting_1348244(38829041, -), CAediting_1348245(38829119, -), CAediting_1348246(38829122, -), CAediting_1348247(38829130, -), CAediting_1348248(38829157, -), CAediting_1348249(38829163, -), CAediting_1348250(38829185, -), CAediting_1348251(38829198, -), CAediting_1348252(38829202, -), CAediting_1348253(38829203, -), CAediting_1348254(38829207, -), CAediting_1348255(38829209, -), CAediting_1348256(38829216, -), CAediting_1348257(38829222, -), CAediting_1348258(38829249, -), CAediting_1348259(38829271, -), CAediting_1348260(38829280, -), CAediting_1348261(38829337, -), CAediting_1348262(38829339, -), CAediting_1348263(38829349, -), CAediting_1348264(38829361, -), CAediting_1348265(38829374, -), CAediting_1348266(38829375, -), CAediting_1348267(38829379, -), CAediting_1348268(38829414, -), CAediting_1348269(38829415, -), CAediting_1348270(38829425, -), CAediting_1348271(38829455, -), CAediting_1348272(38829539, -), CAediting_1348273(38829561, -), CAediting_1348274(38829566, -), CAediting_1348275(38829573, -), CAediting_1348276(38829628, -), CAediting_1348277(38829636, -), CAediting_1348278(38829650, -), CAediting_1348279(38829653, -), CAediting_1348280(38829677, -), CAediting_1348281(38829692, -), CAediting_1348282(38829695, -), CAediting_1348283(38829704, -), CAediting_1348284(38829716, -), CAediting_1348285(38829729, -), CAediting_1348286(38829734, -), CAediting_1348287(38829753, -), CAediting_1348288(38829769, -), CAediting_1348289(38829783, -), CAediting_1348290(38829910, -), CAediting_1348291(38829911, -), CAediting_1348292(38829926, -), CAediting_1348293(38829930, -), CAediting_1348294(38829939, -), CAediting_1348295(38829953, -), CAediting_1348296(38829964, -), CAediting_1348297(38829976, -), CAediting_1348298(38829990, -), CAediting_1348299(38830008, -), CAediting_1348300(38830022, -), CAediting_1348301(38830032, -), CAediting_1348302(38830033, -), CAediting_1348303(38830035, -), CAediting_1348304(38830045, -), CAediting_1348305(38830048, -), CAediting_1348306(38830049, -), CAediting_1348307(38830057, -), CAediting_1348308(38830074, -), CAediting_1348309(38830075, -), CAediting_1348310(38830094, -), CAediting_1348311(38830095, -), CAediting_1348312(38830100, -), CAediting_1348313(38830104, -), CAediting_1348314(38830105, -), CAediting_1348315(38830110, -), CAediting_1348316(38830111, -), CAediting_1348317(38830539, -), CAediting_1348318(38830540, -), CAediting_1348319(38830550, -), CAediting_1348320(38830555, -), CAediting_1348321(38830582, -), CAediting_1348322(38830598, -), CAediting_1348323(38830614, -), CAediting_1348324(38830718, -), CAediting_1348325(38830731, -), CAediting_1348326(38830740, -), CAediting_1348327(38830753, -), CAediting_1348328(38830788, -), CAediting_1348329(38830807, -), CAediting_1348330(38830816, -), CAediting_1348331(38830829, -), CAediting_1348332(38830833, -), CAediting_1348333(38830873, -), CAediting_1348334(38830893, -), CAediting_1348335(38830894, -), CAediting_1348336(38830904, -), CAediting_1348337(38830915, -),

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RNA editing positional annotations for ECH1 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1348147	chr19_38817957_-	ncRNA_intronic
CAediting_1348148	chr19_38817960_-	ncRNA_intronic
CAediting_1348149	chr19_38817979_-	ncRNA_intronic
CAediting_1348150	chr19_38817990_-	ncRNA_intronic
CAediting_1348151	chr19_38817998_-	ncRNA_intronic
CAediting_1348152	chr19_38818018_-	ncRNA_intronic
CAediting_1348153	chr19_38818037_-	ncRNA_intronic
CAediting_1348154	chr19_38818085_-	ncRNA_intronic
CAediting_1348155	chr19_38818108_-	ncRNA_intronic
CAediting_1348156	chr19_38818109_-	ncRNA_intronic
CAediting_1348157	chr19_38818130_-	ncRNA_intronic
CAediting_1348158	chr19_38818137_-	ncRNA_intronic
CAediting_1348159	chr19_38818149_-	ncRNA_intronic
CAediting_1348160	chr19_38818505_-	ncRNA_intronic
CAediting_1348161	chr19_38818584_-	ncRNA_intronic
CAediting_1348162	chr19_38818590_-	ncRNA_intronic
CAediting_1348163	chr19_38818599_-	ncRNA_intronic
CAediting_1348164	chr19_38818625_-	ncRNA_intronic
CAediting_1348165	chr19_38818626_-	ncRNA_intronic
CAediting_1348166	chr19_38818652_-	ncRNA_intronic
CAediting_1348167	chr19_38818670_-	ncRNA_intronic
CAediting_1348168	chr19_38818684_-	ncRNA_intronic
CAediting_1348169	chr19_38818691_-	ncRNA_intronic
CAediting_1348170	chr19_38818720_-	ncRNA_intronic
CAediting_1348171	chr19_38818759_-	ncRNA_intronic
CAediting_1348172	chr19_38819054_-	ncRNA_intronic
CAediting_1348173	chr19_38819701_-	ncRNA_intronic
CAediting_1348174	chr19_38819702_-	ncRNA_intronic
CAediting_1348175	chr19_38819729_-	ncRNA_intronic
CAediting_1348176	chr19_38819735_-	ncRNA_intronic
CAediting_1348177	chr19_38819743_-	ncRNA_intronic
CAediting_1348178	chr19_38819775_-	ncRNA_intronic
CAediting_1348179	chr19_38819780_-	ncRNA_intronic
CAediting_1348180	chr19_38819802_-	ncRNA_intronic
CAediting_1348181	chr19_38819830_-	ncRNA_intronic
CAediting_1348182	chr19_38819852_-	ncRNA_intronic
CAediting_1348183	chr19_38819857_-	ncRNA_intronic
CAediting_1348184	chr19_38819868_-	ncRNA_intronic
CAediting_1348185	chr19_38819869_-	ncRNA_intronic
CAediting_1348186	chr19_38819870_-	ncRNA_intronic
CAediting_1348187	chr19_38819890_-	ncRNA_intronic
CAediting_1348188	chr19_38819900_-	ncRNA_intronic
CAediting_1348189	chr19_38819902_-	ncRNA_intronic
CAediting_1348190	chr19_38819905_-	ncRNA_intronic
CAediting_1348191	chr19_38819914_-	ncRNA_intronic
CAediting_1348192	chr19_38820113_-	ncRNA_intronic
CAediting_1348193	chr19_38820115_-	ncRNA_intronic
CAediting_1348194	chr19_38820128_-	ncRNA_intronic
CAediting_1348195	chr19_38820133_-	ncRNA_intronic
CAediting_1348196	chr19_38820137_-	ncRNA_intronic
CAediting_1348197	chr19_38827690_-	ncRNA_intronic
CAediting_1348198	chr19_38827703_-	ncRNA_intronic
CAediting_1348199	chr19_38827743_-	ncRNA_intronic
CAediting_1348200	chr19_38827749_-	ncRNA_intronic
CAediting_1348201	chr19_38827951_-	ncRNA_intronic
CAediting_1348202	chr19_38827993_-	ncRNA_intronic
CAediting_1348203	chr19_38827994_-	ncRNA_intronic
CAediting_1348204	chr19_38828038_-	ncRNA_intronic
CAediting_1348205	chr19_38828043_-	ncRNA_intronic
CAediting_1348206	chr19_38828045_-	ncRNA_intronic
CAediting_1348207	chr19_38828264_-	ncRNA_intronic
CAediting_1348208	chr19_38828294_-	ncRNA_intronic
CAediting_1348209	chr19_38828328_-	ncRNA_intronic
CAediting_1348210	chr19_38828329_-	ncRNA_intronic
CAediting_1348211	chr19_38828337_-	ncRNA_intronic
CAediting_1348212	chr19_38828338_-	ncRNA_intronic
CAediting_1348213	chr19_38828343_-	ncRNA_intronic
CAediting_1348214	chr19_38828369_-	ncRNA_intronic
CAediting_1348215	chr19_38828370_-	ncRNA_intronic
CAediting_1348216	chr19_38828399_-	ncRNA_intronic
CAediting_1348217	chr19_38828400_-	ncRNA_intronic
CAediting_1348218	chr19_38828410_-	ncRNA_intronic
CAediting_1348219	chr19_38828411_-	ncRNA_intronic
CAediting_1348220	chr19_38828435_-	ncRNA_intronic
CAediting_1348221	chr19_38828451_-	ncRNA_intronic
CAediting_1348222	chr19_38828505_-	ncRNA_intronic
CAediting_1348223	chr19_38828668_-	ncRNA_intronic
CAediting_1348224	chr19_38828701_-	ncRNA_intronic
CAediting_1348225	chr19_38828705_-	ncRNA_intronic
CAediting_1348226	chr19_38828713_-	ncRNA_intronic
CAediting_1348227	chr19_38828721_-	ncRNA_intronic
CAediting_1348228	chr19_38828727_-	ncRNA_intronic
CAediting_1348229	chr19_38828744_-	ncRNA_intronic
CAediting_1348230	chr19_38828748_-	ncRNA_intronic
CAediting_1348231	chr19_38828754_-	ncRNA_intronic
CAediting_1348232	chr19_38828772_-	ncRNA_intronic
CAediting_1348233	chr19_38828780_-	ncRNA_intronic
CAediting_1348234	chr19_38828816_-	ncRNA_intronic
CAediting_1348235	chr19_38828818_-	ncRNA_intronic
CAediting_1348236	chr19_38828826_-	ncRNA_intronic
CAediting_1348237	chr19_38828850_-	ncRNA_intronic
CAediting_1348238	chr19_38828867_-	ncRNA_intronic
CAediting_1348239	chr19_38828894_-	ncRNA_intronic
CAediting_1348240	chr19_38828902_-	ncRNA_intronic
CAediting_1348241	chr19_38828916_-	ncRNA_intronic
CAediting_1348242	chr19_38829028_-	ncRNA_intronic
CAediting_1348243	chr19_38829040_-	ncRNA_intronic
CAediting_1348244	chr19_38829041_-	ncRNA_intronic
CAediting_1348245	chr19_38829119_-	ncRNA_intronic
CAediting_1348246	chr19_38829122_-	ncRNA_intronic
CAediting_1348247	chr19_38829130_-	ncRNA_intronic
CAediting_1348248	chr19_38829157_-	ncRNA_intronic
CAediting_1348249	chr19_38829163_-	ncRNA_intronic
CAediting_1348250	chr19_38829185_-	ncRNA_intronic
CAediting_1348251	chr19_38829198_-	ncRNA_intronic
CAediting_1348252	chr19_38829202_-	ncRNA_intronic
CAediting_1348253	chr19_38829203_-	ncRNA_intronic
CAediting_1348254	chr19_38829207_-	ncRNA_intronic
CAediting_1348255	chr19_38829209_-	ncRNA_intronic
CAediting_1348256	chr19_38829216_-	ncRNA_intronic
CAediting_1348257	chr19_38829222_-	ncRNA_intronic
CAediting_1348258	chr19_38829249_-	ncRNA_intronic
CAediting_1348259	chr19_38829271_-	ncRNA_intronic
CAediting_1348260	chr19_38829280_-	ncRNA_intronic
CAediting_1348261	chr19_38829337_-	ncRNA_intronic
CAediting_1348262	chr19_38829339_-	ncRNA_intronic
CAediting_1348263	chr19_38829349_-	ncRNA_intronic
CAediting_1348264	chr19_38829361_-	ncRNA_intronic
CAediting_1348265	chr19_38829374_-	ncRNA_intronic
CAediting_1348266	chr19_38829375_-	ncRNA_intronic
CAediting_1348267	chr19_38829379_-	ncRNA_intronic
CAediting_1348268	chr19_38829414_-	ncRNA_intronic
CAediting_1348269	chr19_38829415_-	ncRNA_intronic
CAediting_1348270	chr19_38829425_-	ncRNA_intronic
CAediting_1348271	chr19_38829455_-	ncRNA_intronic
CAediting_1348272	chr19_38829539_-	ncRNA_intronic
CAediting_1348273	chr19_38829561_-	ncRNA_intronic
CAediting_1348274	chr19_38829566_-	ncRNA_intronic
CAediting_1348275	chr19_38829573_-	ncRNA_intronic
CAediting_1348276	chr19_38829628_-	ncRNA_intronic
CAediting_1348277	chr19_38829636_-	ncRNA_intronic
CAediting_1348278	chr19_38829650_-	ncRNA_intronic
CAediting_1348279	chr19_38829653_-	ncRNA_intronic
CAediting_1348280	chr19_38829677_-	ncRNA_intronic
CAediting_1348281	chr19_38829692_-	ncRNA_intronic
CAediting_1348282	chr19_38829695_-	ncRNA_intronic
CAediting_1348283	chr19_38829704_-	ncRNA_intronic
CAediting_1348284	chr19_38829716_-	ncRNA_intronic
CAediting_1348285	chr19_38829729_-	ncRNA_intronic
CAediting_1348286	chr19_38829734_-	ncRNA_intronic
CAediting_1348287	chr19_38829753_-	ncRNA_intronic
CAediting_1348288	chr19_38829769_-	ncRNA_intronic
CAediting_1348289	chr19_38829783_-	ncRNA_intronic
CAediting_1348290	chr19_38829910_-	ncRNA_intronic
CAediting_1348291	chr19_38829911_-	ncRNA_intronic
CAediting_1348292	chr19_38829926_-	ncRNA_intronic
CAediting_1348293	chr19_38829930_-	ncRNA_intronic
CAediting_1348294	chr19_38829939_-	ncRNA_intronic
CAediting_1348295	chr19_38829953_-	ncRNA_intronic
CAediting_1348296	chr19_38829964_-	ncRNA_intronic
CAediting_1348297	chr19_38829976_-	ncRNA_intronic
CAediting_1348298	chr19_38829990_-	ncRNA_intronic
CAediting_1348299	chr19_38830008_-	ncRNA_intronic
CAediting_1348300	chr19_38830022_-	ncRNA_intronic
CAediting_1348301	chr19_38830032_-	ncRNA_intronic
CAediting_1348302	chr19_38830033_-	ncRNA_intronic
CAediting_1348303	chr19_38830035_-	ncRNA_intronic
CAediting_1348304	chr19_38830045_-	ncRNA_intronic
CAediting_1348305	chr19_38830048_-	ncRNA_intronic
CAediting_1348306	chr19_38830049_-	ncRNA_intronic
CAediting_1348307	chr19_38830057_-	ncRNA_intronic
CAediting_1348308	chr19_38830074_-	ncRNA_intronic
CAediting_1348309	chr19_38830075_-	ncRNA_intronic
CAediting_1348310	chr19_38830094_-	ncRNA_intronic
CAediting_1348311	chr19_38830095_-	ncRNA_intronic
CAediting_1348312	chr19_38830100_-	ncRNA_intronic
CAediting_1348313	chr19_38830104_-	ncRNA_intronic
CAediting_1348314	chr19_38830105_-	ncRNA_intronic
CAediting_1348315	chr19_38830110_-	ncRNA_intronic
CAediting_1348316	chr19_38830111_-	ncRNA_intronic
CAediting_1348317	chr19_38830539_-	ncRNA_intronic
CAediting_1348318	chr19_38830540_-	ncRNA_intronic
CAediting_1348319	chr19_38830550_-	ncRNA_intronic
CAediting_1348320	chr19_38830555_-	ncRNA_intronic
CAediting_1348321	chr19_38830582_-	ncRNA_intronic
CAediting_1348322	chr19_38830598_-	ncRNA_intronic
CAediting_1348323	chr19_38830614_-	ncRNA_intronic
CAediting_1348324	chr19_38830718_-	ncRNA_intronic
CAediting_1348325	chr19_38830731_-	ncRNA_intronic
CAediting_1348326	chr19_38830740_-	ncRNA_intronic
CAediting_1348327	chr19_38830753_-	ncRNA_intronic
CAediting_1348328	chr19_38830788_-	ncRNA_intronic
CAediting_1348329	chr19_38830807_-	ncRNA_intronic
CAediting_1348330	chr19_38830816_-	ncRNA_intronic
CAediting_1348331	chr19_38830829_-	ncRNA_intronic
CAediting_1348332	chr19_38830833_-	ncRNA_intronic
CAediting_1348333	chr19_38830873_-	ncRNA_intronic
CAediting_1348334	chr19_38830893_-	ncRNA_intronic
CAediting_1348335	chr19_38830894_-	ncRNA_intronic
CAediting_1348336	chr19_38830904_-	ncRNA_exonic
CAediting_1348337	chr19_38830915_-	ncRNA_exonic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1348147	chr19_38817957_-	SINE	Alu	AluJr
CAediting_1348148	chr19_38817960_-	SINE	Alu	AluJr
CAediting_1348149	chr19_38817979_-	SINE	Alu	AluJr
CAediting_1348150	chr19_38817990_-	SINE	Alu	AluJr
CAediting_1348151	chr19_38817998_-	SINE	Alu	AluJr
CAediting_1348152	chr19_38818018_-	SINE	Alu	AluJr
CAediting_1348153	chr19_38818037_-	SINE	Alu	AluJr
CAediting_1348154	chr19_38818085_-	SINE	Alu	AluJo
CAediting_1348155	chr19_38818108_-	SINE	Alu	AluJo
CAediting_1348156	chr19_38818109_-	SINE	Alu	AluJo
CAediting_1348157	chr19_38818130_-	SINE	Alu	AluJo
CAediting_1348158	chr19_38818137_-	SINE	Alu	AluJo
CAediting_1348159	chr19_38818149_-	SINE	Alu	AluJo
CAediting_1348160	chr19_38818505_-	SINE	Alu	AluSq2
CAediting_1348161	chr19_38818584_-	SINE	Alu	AluSq2
CAediting_1348162	chr19_38818590_-	SINE	Alu	AluSq2
CAediting_1348163	chr19_38818599_-	SINE	Alu	AluSq2
CAediting_1348164	chr19_38818625_-	SINE	Alu	AluSq2
CAediting_1348165	chr19_38818626_-	SINE	Alu	AluSq2
CAediting_1348166	chr19_38818652_-	SINE	Alu	AluSq2
CAediting_1348167	chr19_38818670_-	SINE	Alu	AluSq2
CAediting_1348168	chr19_38818684_-	SINE	Alu	AluSq2
CAediting_1348169	chr19_38818691_-	SINE	Alu	AluSq2
CAediting_1348170	chr19_38818720_-	SINE	Alu	AluSq2
CAediting_1348171	chr19_38818759_-	SINE	Alu	AluSq2
CAediting_1348172	chr19_38819054_-	SINE	Alu	AluJo
CAediting_1348173	chr19_38819701_-	SINE	Alu	AluJr
CAediting_1348174	chr19_38819702_-	SINE	Alu	AluJr
CAediting_1348175	chr19_38819729_-	SINE	Alu	AluJr
CAediting_1348176	chr19_38819735_-	SINE	Alu	AluJr
CAediting_1348177	chr19_38819743_-	SINE	Alu	AluJr
CAediting_1348178	chr19_38819775_-	SINE	Alu	AluJr
CAediting_1348179	chr19_38819780_-	SINE	Alu	AluJr
CAediting_1348180	chr19_38819802_-	SINE	Alu	AluJr
CAediting_1348181	chr19_38819830_-	SINE	Alu	AluJr
CAediting_1348182	chr19_38819852_-	SINE	Alu	AluJr
CAediting_1348183	chr19_38819857_-	SINE	Alu	AluJr
CAediting_1348184	chr19_38819868_-	SINE	Alu	AluJr
CAediting_1348185	chr19_38819869_-	SINE	Alu	AluJr
CAediting_1348186	chr19_38819870_-	SINE	Alu	AluJr
CAediting_1348187	chr19_38819890_-	SINE	Alu	AluJr
CAediting_1348188	chr19_38819900_-	SINE	Alu	AluJr
CAediting_1348189	chr19_38819902_-	SINE	Alu	AluJr
CAediting_1348190	chr19_38819905_-	SINE	Alu	AluJr
CAediting_1348191	chr19_38819914_-	SINE	Alu	AluJr
CAediting_1348192	chr19_38820113_-	SINE	Alu	AluY
CAediting_1348193	chr19_38820115_-	SINE	Alu	AluY
CAediting_1348194	chr19_38820128_-	SINE	Alu	AluY
CAediting_1348195	chr19_38820133_-	SINE	Alu	AluY
CAediting_1348196	chr19_38820137_-	SINE	Alu	AluY
CAediting_1348197	chr19_38827690_-	SINE	Alu	AluJb
CAediting_1348198	chr19_38827703_-	SINE	Alu	AluJb
CAediting_1348199	chr19_38827743_-	SINE	Alu	AluJb
CAediting_1348200	chr19_38827749_-	SINE	Alu	AluJb
CAediting_1348201	chr19_38827951_-	SINE	Alu	AluJr
CAediting_1348202	chr19_38827993_-	SINE	Alu	AluJr
CAediting_1348203	chr19_38827994_-	SINE	Alu	AluJr
CAediting_1348204	chr19_38828038_-	SINE	Alu	AluJr
CAediting_1348205	chr19_38828043_-	SINE	Alu	AluJr
CAediting_1348206	chr19_38828045_-	SINE	Alu	AluJr
CAediting_1348207	chr19_38828264_-	SINE	Alu	AluSz
CAediting_1348208	chr19_38828294_-	SINE	Alu	AluSz
CAediting_1348209	chr19_38828328_-	SINE	Alu	AluSz
CAediting_1348210	chr19_38828329_-	SINE	Alu	AluSz
CAediting_1348211	chr19_38828337_-	SINE	Alu	AluSz
CAediting_1348212	chr19_38828338_-	SINE	Alu	AluSz
CAediting_1348213	chr19_38828343_-	SINE	Alu	AluSz
CAediting_1348214	chr19_38828369_-	SINE	Alu	AluSz
CAediting_1348215	chr19_38828370_-	SINE	Alu	AluSz
CAediting_1348216	chr19_38828399_-	SINE	Alu	AluSz
CAediting_1348217	chr19_38828400_-	SINE	Alu	AluSz
CAediting_1348218	chr19_38828410_-	SINE	Alu	AluSz
CAediting_1348219	chr19_38828411_-	SINE	Alu	AluSz
CAediting_1348220	chr19_38828435_-	SINE	Alu	AluSz
CAediting_1348221	chr19_38828451_-	SINE	Alu	AluSz
CAediting_1348222	chr19_38828505_-	SINE	Alu	AluSz
CAediting_1348223	chr19_38828668_-	SINE	Alu	AluY
CAediting_1348224	chr19_38828701_-	SINE	Alu	AluY
CAediting_1348225	chr19_38828705_-	SINE	Alu	AluY
CAediting_1348226	chr19_38828713_-	SINE	Alu	AluY
CAediting_1348227	chr19_38828721_-	SINE	Alu	AluY
CAediting_1348228	chr19_38828727_-	SINE	Alu	AluY
CAediting_1348229	chr19_38828744_-	SINE	Alu	AluY
CAediting_1348230	chr19_38828748_-	SINE	Alu	AluY
CAediting_1348231	chr19_38828754_-	SINE	Alu	AluY
CAediting_1348232	chr19_38828772_-	SINE	Alu	AluY
CAediting_1348233	chr19_38828780_-	SINE	Alu	AluY
CAediting_1348234	chr19_38828816_-	SINE	Alu	AluY
CAediting_1348235	chr19_38828818_-	SINE	Alu	AluY
CAediting_1348236	chr19_38828826_-	SINE	Alu	AluY
CAediting_1348237	chr19_38828850_-	SINE	Alu	AluY
CAediting_1348238	chr19_38828867_-	SINE	Alu	AluY
CAediting_1348239	chr19_38828894_-	SINE	Alu	AluY
CAediting_1348240	chr19_38828902_-	SINE	Alu	AluY
CAediting_1348241	chr19_38828916_-	SINE	Alu	AluY
CAediting_1348242	chr19_38829028_-	SINE	Alu	AluSx1
CAediting_1348243	chr19_38829040_-	SINE	Alu	AluSx1
CAediting_1348244	chr19_38829041_-	SINE	Alu	AluSx1
CAediting_1348245	chr19_38829119_-	SINE	Alu	AluSx1
CAediting_1348246	chr19_38829122_-	SINE	Alu	AluSx1
CAediting_1348247	chr19_38829130_-	SINE	Alu	AluSx1
CAediting_1348248	chr19_38829157_-	SINE	Alu	AluSx1
CAediting_1348249	chr19_38829163_-	SINE	Alu	AluSx1
CAediting_1348250	chr19_38829185_-	SINE	Alu	AluSx1
CAediting_1348251	chr19_38829198_-	SINE	Alu	AluSx1
CAediting_1348252	chr19_38829202_-	SINE	Alu	AluSx1
CAediting_1348253	chr19_38829203_-	SINE	Alu	AluSx1
CAediting_1348254	chr19_38829207_-	SINE	Alu	AluSx1
CAediting_1348255	chr19_38829209_-	SINE	Alu	AluSx1
CAediting_1348256	chr19_38829216_-	SINE	Alu	AluSx1
CAediting_1348257	chr19_38829222_-	SINE	Alu	AluSx1
CAediting_1348258	chr19_38829249_-	SINE	Alu	AluSx1
CAediting_1348259	chr19_38829271_-	SINE	Alu	AluSx1
CAediting_1348260	chr19_38829280_-	SINE	Alu	AluSx1
CAediting_1348261	chr19_38829337_-	SINE	Alu	AluSx1
CAediting_1348262	chr19_38829339_-	SINE	Alu	AluSx1
CAediting_1348263	chr19_38829349_-	SINE	Alu	AluSx1
CAediting_1348264	chr19_38829361_-	SINE	Alu	AluSx1
CAediting_1348265	chr19_38829374_-	SINE	Alu	AluSx1
CAediting_1348266	chr19_38829375_-	SINE	Alu	AluSx1
CAediting_1348267	chr19_38829379_-	SINE	Alu	AluSx1
CAediting_1348268	chr19_38829414_-	SINE	Alu	AluSx1
CAediting_1348269	chr19_38829415_-	SINE	Alu	AluSx1
CAediting_1348270	chr19_38829425_-	SINE	Alu	AluSx1
CAediting_1348271	chr19_38829455_-	SINE	Alu	AluSx1
CAediting_1348272	chr19_38829539_-	SINE	Alu	AluY
CAediting_1348273	chr19_38829561_-	SINE	Alu	AluY
CAediting_1348274	chr19_38829566_-	SINE	Alu	AluY
CAediting_1348275	chr19_38829573_-	SINE	Alu	AluY
CAediting_1348276	chr19_38829628_-	SINE	Alu	AluY
CAediting_1348277	chr19_38829636_-	SINE	Alu	AluY
CAediting_1348278	chr19_38829650_-	SINE	Alu	AluY
CAediting_1348279	chr19_38829653_-	SINE	Alu	AluY
CAediting_1348280	chr19_38829677_-	SINE	Alu	AluY
CAediting_1348281	chr19_38829692_-	SINE	Alu	AluY
CAediting_1348282	chr19_38829695_-	SINE	Alu	AluY
CAediting_1348283	chr19_38829704_-	SINE	Alu	AluY
CAediting_1348284	chr19_38829716_-	SINE	Alu	AluY
CAediting_1348285	chr19_38829729_-	SINE	Alu	AluY
CAediting_1348286	chr19_38829734_-	SINE	Alu	AluY
CAediting_1348287	chr19_38829753_-	SINE	Alu	AluY
CAediting_1348288	chr19_38829769_-	SINE	Alu	AluY
CAediting_1348289	chr19_38829783_-	SINE	Alu	AluY
CAediting_1348290	chr19_38829910_-	SINE	Alu	AluSq2
CAediting_1348291	chr19_38829911_-	SINE	Alu	AluSq2
CAediting_1348292	chr19_38829926_-	SINE	Alu	AluSq2
CAediting_1348293	chr19_38829930_-	SINE	Alu	AluSq2
CAediting_1348294	chr19_38829939_-	SINE	Alu	AluSq2
CAediting_1348295	chr19_38829953_-	SINE	Alu	AluSq2
CAediting_1348296	chr19_38829964_-	SINE	Alu	AluSq2
CAediting_1348297	chr19_38829976_-	SINE	Alu	AluSq2
CAediting_1348298	chr19_38829990_-	SINE	Alu	AluSq2
CAediting_1348299	chr19_38830008_-	SINE	Alu	AluSq2
CAediting_1348300	chr19_38830022_-	SINE	Alu	AluSq2
CAediting_1348301	chr19_38830032_-	SINE	Alu	AluSq2
CAediting_1348302	chr19_38830033_-	SINE	Alu	AluSq2
CAediting_1348303	chr19_38830035_-	SINE	Alu	AluSq2
CAediting_1348304	chr19_38830045_-	SINE	Alu	AluSq2
CAediting_1348305	chr19_38830048_-	SINE	Alu	AluSq2
CAediting_1348306	chr19_38830049_-	SINE	Alu	AluSq2
CAediting_1348307	chr19_38830057_-	SINE	Alu	AluSq2
CAediting_1348308	chr19_38830074_-	SINE	Alu	AluSq2
CAediting_1348309	chr19_38830075_-	SINE	Alu	AluSq2
CAediting_1348310	chr19_38830094_-	SINE	Alu	AluSq2
CAediting_1348311	chr19_38830095_-	SINE	Alu	AluSq2
CAediting_1348312	chr19_38830100_-	SINE	Alu	AluSq2
CAediting_1348313	chr19_38830104_-	SINE	Alu	AluSq2
CAediting_1348314	chr19_38830105_-	SINE	Alu	AluSq2
CAediting_1348315	chr19_38830110_-	SINE	Alu	AluSq2
CAediting_1348316	chr19_38830111_-	SINE	Alu	AluSq2
CAediting_1348317	chr19_38830539_-	SINE	Alu	AluJr
CAediting_1348318	chr19_38830540_-	SINE	Alu	AluJr
CAediting_1348319	chr19_38830550_-	SINE	Alu	AluJr
CAediting_1348320	chr19_38830555_-	SINE	Alu	AluJr
CAediting_1348321	chr19_38830582_-	SINE	Alu	AluJr
CAediting_1348322	chr19_38830598_-	SINE	Alu	AluJr
CAediting_1348323	chr19_38830614_-	SINE	Alu	AluJr
CAediting_1348324	chr19_38830718_-	SINE	Alu	AluSc
CAediting_1348325	chr19_38830731_-	SINE	Alu	AluSc
CAediting_1348326	chr19_38830740_-	SINE	Alu	AluSc
CAediting_1348327	chr19_38830753_-	SINE	Alu	AluSc
CAediting_1348328	chr19_38830788_-	SINE	Alu	AluSc
CAediting_1348329	chr19_38830807_-	SINE	Alu	AluSc
CAediting_1348330	chr19_38830816_-	SINE	Alu	AluSc
CAediting_1348331	chr19_38830829_-	SINE	Alu	AluSc
CAediting_1348332	chr19_38830833_-	SINE	Alu	AluSc
CAediting_1348333	chr19_38830873_-	SINE	Alu	AluSc
CAediting_1348334	chr19_38830893_-	SINE	Alu	AluSc
CAediting_1348335	chr19_38830894_-	SINE	Alu	AluSc
CAediting_1348336	chr19_38830904_-	SINE	Alu	AluSc
CAediting_1348337	chr19_38830915_-	SINE	Alu	AluSc

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RNA A-to-I editing events in the alternative splicing sites for ECH1

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000104823.7.ECH1.

Correlation between RNA A-to-I editing and PSI for ENSG00000104823.7.ECH1.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for ECH1

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for ECH1

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for ECH1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1054808	chr15_66496985_-	ENSG00000104823.7	ENST00000221418	hsa-miR-4512	38815590	38815597	8mer-1a	38815590	38815611	140	-16.84
CAediting_1368054	chr19_46709310_-	ENSG00000104823.7	ENST00000594164	hsa-miR-320e	38831352	38831359	8mer-1a	38831352	38831371	154	-18.62
CAediting_77128	chr1_85133844_+	ENSG00000104823.7	ENST00000594164	hsa-miR-4423-3p	38817087	38817093	7mer-m8	38817086	38817106	140	-12.11

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for ECH1

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for ECH1

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

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Relation with cancer stages for ECH1

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for ECH1

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for ECH1

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for ECH1

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene