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![]() | Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples |
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![]() | The effects of the RNA editing to the stability of the RNA structures |
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Editing gene: TOR1A (CAeditome ID:1861) |
Gene summary for TOR1A |
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Gene information | Gene symbol | TOR1A | Gene ID | 1861 |
Gene name | torsin family 1 member A | |
Synonyms | AMC5|DQ2|DYT1 | |
Cytomap | 9q34.11 | |
Type of gene | protein-coding | |
Description | torsin-1Adystonia 1 proteindystonia 1, torsion (autosomal dominant; torsin A)torsin Atorsin ATPase 1torsin ATPase-1A | |
Modification date | 20210518 | |
UniProtAcc | O14656 | |
Context |
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Gene | GO ID | GO term | PubMed ID |
TOR1A | GO:0140603 | Torsin-1A | 23569223 |
TOR1A | GO:0051584 | Torsin-1A | 15505207 |
TOR1A | GO:0061077 | Torsin-1A | 20169475 |
TOR1A | GO:0061992 | Torsin-1A | 15505207 |
TOR1A | GO:0005788 | Torsin-1A | 17037984 |
TOR1A | GO:0005788 | Torsin-1A | 20015956 |
TOR1A | GO:0008021 | Torsin-1A | 21102408 |
TOR1A | GO:0016020 | Torsin-1A | 23569223 |
TOR1A | GO:0031965 | Torsin-1A | 0000052 |
TOR1A | GO:0042406 | Torsin-1A | 17037984 |
TOR1A | GO:0043231 | Torsin-1A | 0000052 |
TOR1A | GO:0005783 | Torsin-1A | 12671990 |
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RNA A-to-I events for TOR1A |
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CAediting_717068(129814089, -), CAediting_717069(129817617, -), CAediting_717070(129817623, -), CAediting_717071(129819417, -), CAediting_717072(129821811, -), CAediting_717073(129821834, -), |
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RNA editing positional annotations for TOR1A using Annovar |
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CAeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
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CAeditome ID | Position | Variant type |
CAediting_717068 | chr9_129814089_- | exonic |
CAediting_717069 | chr9_129817617_- | ncRNA_intronic |
CAediting_717070 | chr9_129817623_- | ncRNA_intronic |
CAediting_717071 | chr9_129819417_- | ncRNA_intronic |
CAediting_717072 | chr9_129821811_- | ncRNA_exonic |
CAediting_717073 | chr9_129821834_- | ncRNA_exonic |
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CAeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
CAediting_717069 | chr9_129817617_- | SINE | Alu | AluY |
CAediting_717070 | chr9_129817623_- | SINE | Alu | AluY |
CAediting_717071 | chr9_129819417_- | SINE | Alu | AluSx1 |
CAediting_717072 | chr9_129821811_- | SINE | Alu | AluSz |
CAediting_717073 | chr9_129821834_- | SINE | Alu | AluSz |
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RNA A-to-I editing events in the alternative splicing sites for TOR1A |
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AStype | CAeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for TOR1A |
![]() * The grey color means N/A. |
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Protein coding region RNA A-to-I editings for TOR1A |
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The effects of the RNA editing to the miRNA binding sites for TOR1A |
**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page. |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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The effects of the RNA editing to the stability of the RNA structures for TOR1A |
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ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
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CAeditom_ID | ENST | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for TOR1A |
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Cancer | CAeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
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Relation with cancer stages for TOR1A |
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Cancer | Stage_type | CAeditomID | position | P-val | Coeff. |
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Relation with survival for TOR1A |
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Cancer | CAeditomID | position | KMpvalue | Coxpvalue | CoxHR |
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RelatedDrugs for TOR1A |
![]() (DrugBank Version 5.1.8 2021-01-03) |
Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for TOR1A |
![]() (DisGeNet 7.0) |
Gene | Disease ID | Disease name | # pubmeds | Source |
TOR1A | C1851945 | DYSTONIA 1, TORSION, AUTOSOMAL DOMINANT | 16 | GENOMICS_ENGLAND;UNIPROT |
TOR1A | C0013421 | Dystonia | 3 | CTD_human |
TOR1A | C0393588 | Dystonia, Paroxysmal | 3 | CTD_human |
TOR1A | C0393610 | Dystonia, Diurnal | 3 | CTD_human |
TOR1A | C0751093 | Dystonia, Limb | 3 | CTD_human |
TOR1A | C3888090 | Early onset torsion dystonia | 2 | CTD_human;GENOMICS_ENGLAND |
TOR1A | C0221480 | Recurrent depression | 1 | PSYGENET |
TOR1A | C0393593 | Dystonia Disorders | 1 | CTD_human |
TOR1A | C0393598 | Idiopathic familial dystonia | 1 | CTD_human |
TOR1A | C0743332 | Focal Dystonia | 1 | CTD_human |
TOR1A | C0752197 | Adult-Onset Dystonias | 1 | CTD_human |
TOR1A | C0752198 | Adult-Onset Idiopathic Focal Dystonias | 1 | CTD_human |
TOR1A | C0752199 | Adult-Onset Idiopathic Torsion Dystonias | 1 | CTD_human |
TOR1A | C0752200 | Autosomal Dominant Familial Dystonia | 1 | CTD_human |
TOR1A | C0752201 | Autosomal Recessive Familial Dystonia | 1 | CTD_human |
TOR1A | C0752202 | Childhood Onset Dystonias | 1 | CTD_human |
TOR1A | C0752203 | Dystonia, Primary | 1 | CTD_human |
TOR1A | C0752205 | Dystonia, Secondary | 1 | CTD_human |
TOR1A | C0752206 | Dystonias, Sporadic | 1 | CTD_human |
TOR1A | C0752207 | Familial Dystonia | 1 | CTD_human |
TOR1A | C0752208 | Pseudodystonia | 1 | CTD_human |
TOR1A | C2931456 | Prostate cancer, familial | 1 | CTD_human |
TOR1A | C4316810 | Writer's Cramp | 1 | CTD_human |
TOR1A | C4722327 | PROSTATE CANCER, HEREDITARY, 1 | 1 | CTD_human |