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![]() | Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples |
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![]() | The effects of the RNA editing to the stability of the RNA structures |
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Editing gene: DPT (CAeditome ID:1805) |
Gene summary for DPT |
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Gene information | Gene symbol | DPT | Gene ID | 1805 |
Gene name | dermatopontin | |
Synonyms | TRAMP | |
Cytomap | 1q24.2 | |
Type of gene | protein-coding | |
Description | dermatopontintyrosine-rich acidic matrix protein | |
Modification date | 20210518 | |
UniProtAcc | Q07507 | |
Context |
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Gene | GO ID | GO term | PubMed ID |
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RNA A-to-I events for DPT |
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CAediting_119957(168696516, -), |
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RNA editing positional annotations for DPT using Annovar |
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CAeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
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CAeditome ID | Position | Variant type |
CAediting_119957 | chr1_168696516_- | UTR3 |
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CAeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
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RNA A-to-I editing events in the alternative splicing sites for DPT |
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AStype | CAeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for DPT |
![]() * The grey color means N/A. |
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Protein coding region RNA A-to-I editings for DPT |
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The effects of the RNA editing to the miRNA binding sites for DPT |
**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page. |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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The effects of the RNA editing to the stability of the RNA structures for DPT |
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ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
ENST00000367817.3 | protein_coding | ![]() | ![]() |
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CAeditom_ID | ENST | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
CAediting_119957 | ENST00000367817.3 | chr1_168696516_- | -587.00 | -586.20 | -587.00 |
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Relation with ADAR for DPT |
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Cancer | CAeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
LUAD | CAediting_119957 | chr1_168696516_- | . | . | 0.000555016111314989 | 0.296549768198988 | . | . |
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Relation with cancer stages for DPT |
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Cancer | Stage_type | CAeditomID | position | P-val | Coeff. |
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Relation with survival for DPT |
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Cancer | CAeditomID | position | KMpvalue | Coxpvalue | CoxHR |
LUAD | CAediting_119957 | chr1_168696516_- | 0.00144662611418722 | 0.00408715 | 5.07092e-06 |
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RelatedDrugs for DPT |
![]() (DrugBank Version 5.1.8 2021-01-03) |
Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for DPT |
![]() (DisGeNet 7.0) |
Gene | Disease ID | Disease name | # pubmeds | Source |
DPT | C0042345 | Varicosity | 1 | CTD_human |