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Editing gene: AFG3L1P (CAeditome ID:172)

Gene summary for AFG3L1P

Gene summary

Gene information	Gene symbol	AFG3L1P
	Gene ID	172
	Gene name	AFG3 like matrix AAA peptidase subunit 1, pseudogene
	Synonyms	AFG3\|AFG3L1
	Cytomap	16q24.3
	Type of gene	pseudo
	Description	AFG3 (ATPase family gene 3, yeast)-like 1AFG3 ATPase family gene 3-like 1, pseudogeneAFG3 ATPase family member 3-like 1, pseudogeneAFG3 like AAA ATPase 1, pseudogene
	Modification date	20210518
	UniProtAcc	.
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for AFG3L1P

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000223959.7

RNA A-to-I editing events in Cancer.

CAediting_1146488(89973449, +), CAediting_1146489(89974252, +), CAediting_1146490(89974577, +), CAediting_1146491(89974604, +), CAediting_1146492(89975312, +), CAediting_1146493(89976284, +), CAediting_1146494(89976291, +), CAediting_1146495(89976306, +), CAediting_1146496(89976312, +), CAediting_1146497(89976313, +), CAediting_1146498(89976329, +), CAediting_1146499(89976596, +), CAediting_1146500(89976639, +), CAediting_1146501(89976655, +), CAediting_1146502(89976662, +), CAediting_1146503(89976666, +), CAediting_1146504(89976701, +), CAediting_1146505(89976703, +), CAediting_1146506(89976727, +), CAediting_1146507(89976822, +), CAediting_1146508(89976824, +), CAediting_1146509(89977086, +), CAediting_1146510(89977096, +), CAediting_1146511(89977112, +), CAediting_1146512(89977120, +), CAediting_1146513(89977125, +), CAediting_1146514(89977127, +), CAediting_1146515(89977135, +), CAediting_1146516(89977140, +), CAediting_1146517(89977149, +), CAediting_1146518(89977150, +), CAediting_1146519(89977151, +), CAediting_1146520(89977152, +), CAediting_1146521(89977153, +), CAediting_1146522(89977155, +), CAediting_1146523(89977158, +), CAediting_1146524(89977160, +), CAediting_1146525(89977163, +), CAediting_1146526(89977189, +), CAediting_1146527(89977195, +), CAediting_1146528(89977199, +), CAediting_1146529(89977216, +), CAediting_1146530(89977222, +), CAediting_1146531(89977230, +), CAediting_1146532(89977231, +), CAediting_1146533(89977235, +), CAediting_1146534(89977242, +), CAediting_1146535(89977295, +), CAediting_1146536(89977297, +), CAediting_1146537(89978066, +), CAediting_1146538(89978498, +), CAediting_1146539(89978499, +), CAediting_1146540(89978544, +), CAediting_1146541(89978558, +), CAediting_1146542(89978567, +), CAediting_1146543(89978569, +), CAediting_1146544(89978576, +), CAediting_1146545(89978594, +), CAediting_1146546(89978600, +), CAediting_1146547(89978601, +), CAediting_1146548(89978606, +), CAediting_1146549(89978632, +), CAediting_1146550(89978633, +), CAediting_1146551(89978646, +), CAediting_1146552(89978659, +), CAediting_1146553(89978681, +), CAediting_1146554(89978694, +), CAediting_1146555(89978698, +), CAediting_1146556(89978736, +), CAediting_1146557(89978737, +), CAediting_1146558(89979415, +), CAediting_1146559(89979493, +), CAediting_1146560(89979548, +), CAediting_1146561(89980861, +), CAediting_1146562(89980877, +), CAediting_1146563(89980878, +), CAediting_1146564(89981061, +), CAediting_1146565(89981062, +), CAediting_1146566(89981066, +), CAediting_1146567(89981069, +), CAediting_1146568(89981205, +), CAediting_1146569(89981238, +), CAediting_1146570(89981241, +), CAediting_1146571(89981286, +), CAediting_1146572(89984909, +), CAediting_1146573(89984917, +), CAediting_1146574(89984918, +), CAediting_1146575(89984923, +), CAediting_1146576(89984926, +), CAediting_1146577(89984934, +), CAediting_1146578(89984948, +), CAediting_1146579(89984963, +), CAediting_1146580(89984971, +), CAediting_1146581(89984972, +), CAediting_1146582(89984977, +), CAediting_1146583(89984986, +), CAediting_1146584(89984987, +), CAediting_1146585(89984989, +), CAediting_1146586(89984996, +), CAediting_1146587(89984997, +), CAediting_1146588(89985008, +), CAediting_1146589(89985012, +), CAediting_1146590(89985013, +), CAediting_1146591(89985014, +), CAediting_1146592(89985017, +), CAediting_1146593(89985019, +), CAediting_1146594(89985026, +), CAediting_1146595(89985032, +), CAediting_1146596(89985034, +), CAediting_1146597(89985052, +), CAediting_1146598(89985053, +), CAediting_1146599(89985058, +), CAediting_1146600(89985062, +), CAediting_1146601(89985066, +), CAediting_1146602(89985082, +), CAediting_1146603(89985084, +), CAediting_1146604(89985085, +), CAediting_1146605(89985093, +), CAediting_1146606(89985094, +), CAediting_1146607(89985101, +), CAediting_1146608(89985112, +), CAediting_1146609(89985122, +), CAediting_1146610(89985123, +), CAediting_1146611(89985138, +), CAediting_1146612(89985155, +), CAediting_1146613(89986336, +), CAediting_1146614(89986434, +), CAediting_1146615(89986446, +), CAediting_1146616(89986578, +), CAediting_1146617(89986590, +), CAediting_1146618(89987485, +), CAediting_1146619(89987825, +), CAediting_1146620(89987891, +), CAediting_1146621(89987895, +), CAediting_1146622(89987896, +), CAediting_1146623(89987901, +), CAediting_1146624(89987925, +), CAediting_1146625(89987928, +), CAediting_1146626(89987931, +), CAediting_1146627(89987938, +), CAediting_1146628(89987941, +), CAediting_1146629(89987955, +), CAediting_1146630(89987963, +), CAediting_1146631(89987968, +), CAediting_1146632(89987990, +), CAediting_1146633(89988000, +), CAediting_1146634(89988018, +), CAediting_1146635(89988036, +), CAediting_1146636(89988040, +), CAediting_1146637(89988047, +), CAediting_1146638(89988053, +), CAediting_1146639(89988057, +), CAediting_1146640(89988062, +), CAediting_1146641(89988063, +), CAediting_1146642(89988071, +), CAediting_1146643(89988084, +), CAediting_1146644(89988090, +), CAediting_1146645(89988104, +), CAediting_1146646(89988207, +), CAediting_1146647(89988209, +), CAediting_1146648(89988213, +), CAediting_1146649(89988215, +), CAediting_1146650(89988233, +), CAediting_1146651(89988257, +), CAediting_1146652(89988264, +), CAediting_1146653(89988277, +), CAediting_1146654(89988287, +), CAediting_1146655(89988290, +), CAediting_1146656(89988293, +), CAediting_1146657(89988302, +), CAediting_1146658(89988307, +), CAediting_1146659(89988319, +), CAediting_1146660(89988325, +), CAediting_1146661(89988326, +), CAediting_1146662(89988329, +), CAediting_1146663(89988335, +), CAediting_1146664(89988351, +), CAediting_1146665(89988352, +), CAediting_1146666(89988355, +), CAediting_1146667(89988356, +), CAediting_1146668(89988370, +), CAediting_1146669(89988373, +), CAediting_1146670(89988390, +), CAediting_1146671(89988399, +), CAediting_1146672(89988411, +), CAediting_1146673(89988419, +), CAediting_1146674(89988424, +), CAediting_1146675(89988429, +), CAediting_1146676(89988433, +), CAediting_1146677(89988452, +), CAediting_1146678(89988464, +), CAediting_1146679(89988482, +), CAediting_1146680(89988496, +), CAediting_1146681(89988508, +), CAediting_1146682(89988559, +), CAediting_1146683(89988572, +), CAediting_1146684(89988586, +), CAediting_1146685(89988587, +), CAediting_1146686(89988599, +), CAediting_1146687(89989840, +), CAediting_1146688(89989848, +), CAediting_1146689(89991518, +), CAediting_1146690(89996088, +), CAediting_1146691(89996256, +), CAediting_1146692(89997655, +), CAediting_1146693(89997740, +), CAediting_1146694(89997748, +),

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RNA editing positional annotations for AFG3L1P using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1146488	chr16_89973449_+	ncRNA_intronic
CAediting_1146489	chr16_89974252_+	ncRNA_intronic
CAediting_1146490	chr16_89974577_+	ncRNA_intronic
CAediting_1146491	chr16_89974604_+	ncRNA_intronic
CAediting_1146492	chr16_89975312_+	ncRNA_intronic
CAediting_1146493	chr16_89976284_+	ncRNA_intronic
CAediting_1146494	chr16_89976291_+	ncRNA_intronic
CAediting_1146495	chr16_89976306_+	ncRNA_intronic
CAediting_1146496	chr16_89976312_+	ncRNA_intronic
CAediting_1146497	chr16_89976313_+	ncRNA_intronic
CAediting_1146498	chr16_89976329_+	ncRNA_intronic
CAediting_1146499	chr16_89976596_+	ncRNA_intronic
CAediting_1146500	chr16_89976639_+	ncRNA_intronic
CAediting_1146501	chr16_89976655_+	ncRNA_intronic
CAediting_1146502	chr16_89976662_+	ncRNA_intronic
CAediting_1146503	chr16_89976666_+	ncRNA_intronic
CAediting_1146504	chr16_89976701_+	ncRNA_intronic
CAediting_1146505	chr16_89976703_+	ncRNA_intronic
CAediting_1146506	chr16_89976727_+	ncRNA_intronic
CAediting_1146507	chr16_89976822_+	ncRNA_intronic
CAediting_1146508	chr16_89976824_+	ncRNA_intronic
CAediting_1146509	chr16_89977086_+	ncRNA_intronic
CAediting_1146510	chr16_89977096_+	ncRNA_intronic
CAediting_1146511	chr16_89977112_+	ncRNA_intronic
CAediting_1146512	chr16_89977120_+	ncRNA_intronic
CAediting_1146513	chr16_89977125_+	ncRNA_intronic
CAediting_1146514	chr16_89977127_+	ncRNA_intronic
CAediting_1146515	chr16_89977135_+	ncRNA_intronic
CAediting_1146516	chr16_89977140_+	ncRNA_intronic
CAediting_1146517	chr16_89977149_+	ncRNA_intronic
CAediting_1146518	chr16_89977150_+	ncRNA_intronic
CAediting_1146519	chr16_89977151_+	ncRNA_intronic
CAediting_1146520	chr16_89977152_+	ncRNA_intronic
CAediting_1146521	chr16_89977153_+	ncRNA_intronic
CAediting_1146522	chr16_89977155_+	ncRNA_intronic
CAediting_1146523	chr16_89977158_+	ncRNA_intronic
CAediting_1146524	chr16_89977160_+	ncRNA_intronic
CAediting_1146525	chr16_89977163_+	ncRNA_intronic
CAediting_1146526	chr16_89977189_+	ncRNA_intronic
CAediting_1146527	chr16_89977195_+	ncRNA_intronic
CAediting_1146528	chr16_89977199_+	ncRNA_intronic
CAediting_1146529	chr16_89977216_+	ncRNA_intronic
CAediting_1146530	chr16_89977222_+	ncRNA_intronic
CAediting_1146531	chr16_89977230_+	ncRNA_intronic
CAediting_1146532	chr16_89977231_+	ncRNA_intronic
CAediting_1146533	chr16_89977235_+	ncRNA_intronic
CAediting_1146534	chr16_89977242_+	ncRNA_intronic
CAediting_1146535	chr16_89977295_+	ncRNA_intronic
CAediting_1146536	chr16_89977297_+	ncRNA_intronic
CAediting_1146537	chr16_89978066_+	ncRNA_exonic
CAediting_1146538	chr16_89978498_+	ncRNA_exonic
CAediting_1146539	chr16_89978499_+	ncRNA_exonic
CAediting_1146540	chr16_89978544_+	ncRNA_intronic
CAediting_1146541	chr16_89978558_+	ncRNA_intronic
CAediting_1146542	chr16_89978567_+	ncRNA_intronic
CAediting_1146543	chr16_89978569_+	ncRNA_intronic
CAediting_1146544	chr16_89978576_+	ncRNA_intronic
CAediting_1146545	chr16_89978594_+	ncRNA_intronic
CAediting_1146546	chr16_89978600_+	ncRNA_intronic
CAediting_1146547	chr16_89978601_+	ncRNA_intronic
CAediting_1146548	chr16_89978606_+	ncRNA_intronic
CAediting_1146549	chr16_89978632_+	ncRNA_intronic
CAediting_1146550	chr16_89978633_+	ncRNA_intronic
CAediting_1146551	chr16_89978646_+	ncRNA_intronic
CAediting_1146552	chr16_89978659_+	ncRNA_intronic
CAediting_1146553	chr16_89978681_+	ncRNA_intronic
CAediting_1146554	chr16_89978694_+	ncRNA_intronic
CAediting_1146555	chr16_89978698_+	ncRNA_intronic
CAediting_1146556	chr16_89978736_+	ncRNA_intronic
CAediting_1146557	chr16_89978737_+	ncRNA_intronic
CAediting_1146558	chr16_89979415_+	ncRNA_exonic
CAediting_1146559	chr16_89979493_+	ncRNA_exonic
CAediting_1146560	chr16_89979548_+	ncRNA_exonic
CAediting_1146561	chr16_89980861_+	ncRNA_intronic
CAediting_1146562	chr16_89980877_+	ncRNA_intronic
CAediting_1146563	chr16_89980878_+	ncRNA_intronic
CAediting_1146564	chr16_89981061_+	ncRNA_intronic
CAediting_1146565	chr16_89981062_+	ncRNA_intronic
CAediting_1146566	chr16_89981066_+	ncRNA_intronic
CAediting_1146567	chr16_89981069_+	ncRNA_intronic
CAediting_1146568	chr16_89981205_+	ncRNA_intronic
CAediting_1146569	chr16_89981238_+	ncRNA_intronic
CAediting_1146570	chr16_89981241_+	ncRNA_intronic
CAediting_1146571	chr16_89981286_+	ncRNA_intronic
CAediting_1146572	chr16_89984909_+	ncRNA_intronic
CAediting_1146573	chr16_89984917_+	ncRNA_intronic
CAediting_1146574	chr16_89984918_+	ncRNA_intronic
CAediting_1146575	chr16_89984923_+	ncRNA_intronic
CAediting_1146576	chr16_89984926_+	ncRNA_intronic
CAediting_1146577	chr16_89984934_+	ncRNA_intronic
CAediting_1146578	chr16_89984948_+	ncRNA_intronic
CAediting_1146579	chr16_89984963_+	ncRNA_intronic
CAediting_1146580	chr16_89984971_+	ncRNA_intronic
CAediting_1146581	chr16_89984972_+	ncRNA_intronic
CAediting_1146582	chr16_89984977_+	ncRNA_intronic
CAediting_1146583	chr16_89984986_+	ncRNA_intronic
CAediting_1146584	chr16_89984987_+	ncRNA_intronic
CAediting_1146585	chr16_89984989_+	ncRNA_intronic
CAediting_1146586	chr16_89984996_+	ncRNA_intronic
CAediting_1146587	chr16_89984997_+	ncRNA_intronic
CAediting_1146588	chr16_89985008_+	ncRNA_intronic
CAediting_1146589	chr16_89985012_+	ncRNA_intronic
CAediting_1146590	chr16_89985013_+	ncRNA_intronic
CAediting_1146591	chr16_89985014_+	ncRNA_intronic
CAediting_1146592	chr16_89985017_+	ncRNA_intronic
CAediting_1146593	chr16_89985019_+	ncRNA_intronic
CAediting_1146594	chr16_89985026_+	ncRNA_intronic
CAediting_1146595	chr16_89985032_+	ncRNA_intronic
CAediting_1146596	chr16_89985034_+	ncRNA_intronic
CAediting_1146597	chr16_89985052_+	ncRNA_intronic
CAediting_1146598	chr16_89985053_+	ncRNA_intronic
CAediting_1146599	chr16_89985058_+	ncRNA_intronic
CAediting_1146600	chr16_89985062_+	ncRNA_intronic
CAediting_1146601	chr16_89985066_+	ncRNA_intronic
CAediting_1146602	chr16_89985082_+	ncRNA_intronic
CAediting_1146603	chr16_89985084_+	ncRNA_intronic
CAediting_1146604	chr16_89985085_+	ncRNA_intronic
CAediting_1146605	chr16_89985093_+	ncRNA_intronic
CAediting_1146606	chr16_89985094_+	ncRNA_intronic
CAediting_1146607	chr16_89985101_+	ncRNA_intronic
CAediting_1146608	chr16_89985112_+	ncRNA_intronic
CAediting_1146609	chr16_89985122_+	ncRNA_intronic
CAediting_1146610	chr16_89985123_+	ncRNA_intronic
CAediting_1146611	chr16_89985138_+	ncRNA_intronic
CAediting_1146612	chr16_89985155_+	ncRNA_intronic
CAediting_1146613	chr16_89986336_+	ncRNA_intronic
CAediting_1146614	chr16_89986434_+	ncRNA_intronic
CAediting_1146615	chr16_89986446_+	ncRNA_intronic
CAediting_1146616	chr16_89986578_+	ncRNA_intronic
CAediting_1146617	chr16_89986590_+	ncRNA_intronic
CAediting_1146618	chr16_89987485_+	ncRNA_intronic
CAediting_1146619	chr16_89987825_+	ncRNA_intronic
CAediting_1146620	chr16_89987891_+	ncRNA_intronic
CAediting_1146621	chr16_89987895_+	ncRNA_intronic
CAediting_1146622	chr16_89987896_+	ncRNA_intronic
CAediting_1146623	chr16_89987901_+	ncRNA_intronic
CAediting_1146624	chr16_89987925_+	ncRNA_intronic
CAediting_1146625	chr16_89987928_+	ncRNA_intronic
CAediting_1146626	chr16_89987931_+	ncRNA_intronic
CAediting_1146627	chr16_89987938_+	ncRNA_intronic
CAediting_1146628	chr16_89987941_+	ncRNA_intronic
CAediting_1146629	chr16_89987955_+	ncRNA_intronic
CAediting_1146630	chr16_89987963_+	ncRNA_intronic
CAediting_1146631	chr16_89987968_+	ncRNA_intronic
CAediting_1146632	chr16_89987990_+	ncRNA_intronic
CAediting_1146633	chr16_89988000_+	ncRNA_intronic
CAediting_1146634	chr16_89988018_+	ncRNA_intronic
CAediting_1146635	chr16_89988036_+	ncRNA_intronic
CAediting_1146636	chr16_89988040_+	ncRNA_intronic
CAediting_1146637	chr16_89988047_+	ncRNA_intronic
CAediting_1146638	chr16_89988053_+	ncRNA_intronic
CAediting_1146639	chr16_89988057_+	ncRNA_intronic
CAediting_1146640	chr16_89988062_+	ncRNA_intronic
CAediting_1146641	chr16_89988063_+	ncRNA_intronic
CAediting_1146642	chr16_89988071_+	ncRNA_intronic
CAediting_1146643	chr16_89988084_+	ncRNA_intronic
CAediting_1146644	chr16_89988090_+	ncRNA_intronic
CAediting_1146645	chr16_89988104_+	ncRNA_intronic
CAediting_1146646	chr16_89988207_+	ncRNA_intronic
CAediting_1146647	chr16_89988209_+	ncRNA_intronic
CAediting_1146648	chr16_89988213_+	ncRNA_intronic
CAediting_1146649	chr16_89988215_+	ncRNA_intronic
CAediting_1146650	chr16_89988233_+	ncRNA_intronic
CAediting_1146651	chr16_89988257_+	ncRNA_intronic
CAediting_1146652	chr16_89988264_+	ncRNA_intronic
CAediting_1146653	chr16_89988277_+	ncRNA_intronic
CAediting_1146654	chr16_89988287_+	ncRNA_intronic
CAediting_1146655	chr16_89988290_+	ncRNA_intronic
CAediting_1146656	chr16_89988293_+	ncRNA_intronic
CAediting_1146657	chr16_89988302_+	ncRNA_intronic
CAediting_1146658	chr16_89988307_+	ncRNA_intronic
CAediting_1146659	chr16_89988319_+	ncRNA_intronic
CAediting_1146660	chr16_89988325_+	ncRNA_intronic
CAediting_1146661	chr16_89988326_+	ncRNA_intronic
CAediting_1146662	chr16_89988329_+	ncRNA_intronic
CAediting_1146663	chr16_89988335_+	ncRNA_intronic
CAediting_1146664	chr16_89988351_+	ncRNA_intronic
CAediting_1146665	chr16_89988352_+	ncRNA_intronic
CAediting_1146666	chr16_89988355_+	ncRNA_intronic
CAediting_1146667	chr16_89988356_+	ncRNA_intronic
CAediting_1146668	chr16_89988370_+	ncRNA_intronic
CAediting_1146669	chr16_89988373_+	ncRNA_intronic
CAediting_1146670	chr16_89988390_+	ncRNA_intronic
CAediting_1146671	chr16_89988399_+	ncRNA_intronic
CAediting_1146672	chr16_89988411_+	ncRNA_intronic
CAediting_1146673	chr16_89988419_+	ncRNA_intronic
CAediting_1146674	chr16_89988424_+	ncRNA_intronic
CAediting_1146675	chr16_89988429_+	ncRNA_intronic
CAediting_1146676	chr16_89988433_+	ncRNA_intronic
CAediting_1146677	chr16_89988452_+	ncRNA_intronic
CAediting_1146678	chr16_89988464_+	ncRNA_intronic
CAediting_1146679	chr16_89988482_+	ncRNA_intronic
CAediting_1146680	chr16_89988496_+	ncRNA_exonic
CAediting_1146681	chr16_89988508_+	ncRNA_exonic
CAediting_1146682	chr16_89988559_+	ncRNA_exonic
CAediting_1146683	chr16_89988572_+	ncRNA_exonic
CAediting_1146684	chr16_89988586_+	ncRNA_exonic
CAediting_1146685	chr16_89988587_+	ncRNA_exonic
CAediting_1146686	chr16_89988599_+	ncRNA_exonic
CAediting_1146687	chr16_89989840_+	ncRNA_intronic
CAediting_1146688	chr16_89989848_+	ncRNA_intronic
CAediting_1146689	chr16_89991518_+	ncRNA_intronic
CAediting_1146690	chr16_89996088_+	ncRNA_exonic
CAediting_1146691	chr16_89996256_+	ncRNA_exonic
CAediting_1146692	chr16_89997655_+	ncRNA_intronic
CAediting_1146693	chr16_89997740_+	ncRNA_intronic
CAediting_1146694	chr16_89997748_+	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1146488	chr16_89973449_+	SINE	Alu	FLAM_C
CAediting_1146489	chr16_89974252_+	SINE	Alu	AluSq2
CAediting_1146490	chr16_89974577_+	SINE	Alu	AluSp
CAediting_1146491	chr16_89974604_+	SINE	Alu	AluSp
CAediting_1146493	chr16_89976284_+	SINE	Alu	AluSx
CAediting_1146494	chr16_89976291_+	SINE	Alu	AluSx
CAediting_1146495	chr16_89976306_+	SINE	Alu	AluSx
CAediting_1146496	chr16_89976312_+	SINE	Alu	AluSx
CAediting_1146497	chr16_89976313_+	SINE	Alu	AluSx
CAediting_1146498	chr16_89976329_+	SINE	Alu	AluSx
CAediting_1146499	chr16_89976596_+	SINE	Alu	AluSx1
CAediting_1146500	chr16_89976639_+	SINE	Alu	AluSx1
CAediting_1146501	chr16_89976655_+	SINE	Alu	AluSx1
CAediting_1146502	chr16_89976662_+	SINE	Alu	AluSx1
CAediting_1146503	chr16_89976666_+	SINE	Alu	AluSx1
CAediting_1146504	chr16_89976701_+	SINE	Alu	AluSx1
CAediting_1146505	chr16_89976703_+	SINE	Alu	AluSx1
CAediting_1146506	chr16_89976727_+	SINE	Alu	AluSx1
CAediting_1146507	chr16_89976822_+	SINE	Alu	AluSx1
CAediting_1146508	chr16_89976824_+	SINE	Alu	AluSx1
CAediting_1146509	chr16_89977086_+	SINE	Alu	AluSx1
CAediting_1146510	chr16_89977096_+	SINE	Alu	AluSx1
CAediting_1146511	chr16_89977112_+	SINE	Alu	AluSx1
CAediting_1146512	chr16_89977120_+	SINE	Alu	AluSx1
CAediting_1146513	chr16_89977125_+	SINE	Alu	AluSx1
CAediting_1146514	chr16_89977127_+	SINE	Alu	AluSx1
CAediting_1146515	chr16_89977135_+	SINE	Alu	AluSx1
CAediting_1146516	chr16_89977140_+	SINE	Alu	AluSx1
CAediting_1146517	chr16_89977149_+	SINE	Alu	AluSx1
CAediting_1146518	chr16_89977150_+	SINE	Alu	AluSx1
CAediting_1146519	chr16_89977151_+	SINE	Alu	AluSx1
CAediting_1146520	chr16_89977152_+	SINE	Alu	AluSx1
CAediting_1146521	chr16_89977153_+	SINE	Alu	AluSx1
CAediting_1146522	chr16_89977155_+	SINE	Alu	AluSx1
CAediting_1146523	chr16_89977158_+	SINE	Alu	AluSx1
CAediting_1146524	chr16_89977160_+	SINE	Alu	AluSx1
CAediting_1146525	chr16_89977163_+	SINE	Alu	AluSx1
CAediting_1146526	chr16_89977189_+	SINE	Alu	AluSx1
CAediting_1146527	chr16_89977195_+	SINE	Alu	AluSx1
CAediting_1146528	chr16_89977199_+	SINE	Alu	AluSx1
CAediting_1146529	chr16_89977216_+	SINE	Alu	AluSx1
CAediting_1146530	chr16_89977222_+	SINE	Alu	AluSx1
CAediting_1146531	chr16_89977230_+	SINE	Alu	AluSx1
CAediting_1146532	chr16_89977231_+	SINE	Alu	AluSx1
CAediting_1146533	chr16_89977235_+	SINE	Alu	AluSx1
CAediting_1146534	chr16_89977242_+	SINE	Alu	AluSx1
CAediting_1146535	chr16_89977295_+	SINE	Alu	AluSx1
CAediting_1146536	chr16_89977297_+	SINE	Alu	AluSx1
CAediting_1146538	chr16_89978498_+	SINE	Alu	AluSx1
CAediting_1146539	chr16_89978499_+	SINE	Alu	AluSx1
CAediting_1146540	chr16_89978544_+	SINE	Alu	AluSx1
CAediting_1146541	chr16_89978558_+	SINE	Alu	AluSx1
CAediting_1146542	chr16_89978567_+	SINE	Alu	AluSx1
CAediting_1146543	chr16_89978569_+	SINE	Alu	AluSx1
CAediting_1146544	chr16_89978576_+	SINE	Alu	AluSx1
CAediting_1146545	chr16_89978594_+	SINE	Alu	AluSx1
CAediting_1146546	chr16_89978600_+	SINE	Alu	AluSx1
CAediting_1146547	chr16_89978601_+	SINE	Alu	AluSx1
CAediting_1146548	chr16_89978606_+	SINE	Alu	AluSx1
CAediting_1146549	chr16_89978632_+	SINE	Alu	AluSx1
CAediting_1146550	chr16_89978633_+	SINE	Alu	AluSx1
CAediting_1146551	chr16_89978646_+	SINE	Alu	AluSx1
CAediting_1146552	chr16_89978659_+	SINE	Alu	AluSx1
CAediting_1146553	chr16_89978681_+	SINE	Alu	AluSx1
CAediting_1146554	chr16_89978694_+	SINE	Alu	AluSx1
CAediting_1146555	chr16_89978698_+	SINE	Alu	AluSx1
CAediting_1146556	chr16_89978736_+	SINE	Alu	AluSx1
CAediting_1146557	chr16_89978737_+	SINE	Alu	AluSx1
CAediting_1146558	chr16_89979415_+	SINE	Alu	AluY
CAediting_1146559	chr16_89979493_+	SINE	Alu	AluY
CAediting_1146560	chr16_89979548_+	SINE	Alu	AluY
CAediting_1146561	chr16_89980861_+	SINE	Alu	AluJb
CAediting_1146562	chr16_89980877_+	SINE	Alu	AluJb
CAediting_1146563	chr16_89980878_+	SINE	Alu	AluJb
CAediting_1146564	chr16_89981061_+	SINE	Alu	AluJb
CAediting_1146565	chr16_89981062_+	SINE	Alu	AluJb
CAediting_1146566	chr16_89981066_+	SINE	Alu	AluJb
CAediting_1146567	chr16_89981069_+	SINE	Alu	AluJb
CAediting_1146568	chr16_89981205_+	SINE	Alu	AluJb
CAediting_1146569	chr16_89981238_+	SINE	Alu	AluJb
CAediting_1146570	chr16_89981241_+	SINE	Alu	AluJb
CAediting_1146571	chr16_89981286_+	SINE	Alu	AluJb
CAediting_1146572	chr16_89984909_+	SINE	Alu	AluSz
CAediting_1146573	chr16_89984917_+	SINE	Alu	AluSz
CAediting_1146574	chr16_89984918_+	SINE	Alu	AluSz
CAediting_1146575	chr16_89984923_+	SINE	Alu	AluSz
CAediting_1146576	chr16_89984926_+	SINE	Alu	AluSz
CAediting_1146577	chr16_89984934_+	SINE	Alu	AluSz
CAediting_1146578	chr16_89984948_+	SINE	Alu	AluSz
CAediting_1146579	chr16_89984963_+	SINE	Alu	AluSz
CAediting_1146580	chr16_89984971_+	SINE	Alu	AluSz
CAediting_1146581	chr16_89984972_+	SINE	Alu	AluSz
CAediting_1146582	chr16_89984977_+	SINE	Alu	AluSz
CAediting_1146583	chr16_89984986_+	SINE	Alu	AluSz
CAediting_1146584	chr16_89984987_+	SINE	Alu	AluSz
CAediting_1146585	chr16_89984989_+	SINE	Alu	AluSz
CAediting_1146586	chr16_89984996_+	SINE	Alu	AluSz
CAediting_1146587	chr16_89984997_+	SINE	Alu	AluSz
CAediting_1146588	chr16_89985008_+	SINE	Alu	AluSz
CAediting_1146589	chr16_89985012_+	SINE	Alu	AluSz
CAediting_1146590	chr16_89985013_+	SINE	Alu	AluSz
CAediting_1146591	chr16_89985014_+	SINE	Alu	AluSz
CAediting_1146592	chr16_89985017_+	SINE	Alu	AluSz
CAediting_1146593	chr16_89985019_+	SINE	Alu	AluSz
CAediting_1146594	chr16_89985026_+	SINE	Alu	AluSz
CAediting_1146595	chr16_89985032_+	SINE	Alu	AluSz
CAediting_1146596	chr16_89985034_+	SINE	Alu	AluSz
CAediting_1146597	chr16_89985052_+	SINE	Alu	AluSz
CAediting_1146598	chr16_89985053_+	SINE	Alu	AluSz
CAediting_1146599	chr16_89985058_+	SINE	Alu	AluSz
CAediting_1146600	chr16_89985062_+	SINE	Alu	AluSz
CAediting_1146601	chr16_89985066_+	SINE	Alu	AluSz
CAediting_1146602	chr16_89985082_+	SINE	Alu	AluSz
CAediting_1146603	chr16_89985084_+	SINE	Alu	AluSz
CAediting_1146604	chr16_89985085_+	SINE	Alu	AluSz
CAediting_1146605	chr16_89985093_+	SINE	Alu	AluSz
CAediting_1146606	chr16_89985094_+	SINE	Alu	AluSz
CAediting_1146607	chr16_89985101_+	SINE	Alu	AluSz
CAediting_1146608	chr16_89985112_+	SINE	Alu	AluSz
CAediting_1146609	chr16_89985122_+	SINE	Alu	AluSz
CAediting_1146610	chr16_89985123_+	SINE	Alu	AluSz
CAediting_1146611	chr16_89985138_+	SINE	Alu	AluSz
CAediting_1146612	chr16_89985155_+	SINE	Alu	AluSz
CAediting_1146613	chr16_89986336_+	SINE	Alu	AluY
CAediting_1146614	chr16_89986434_+	SINE	Alu	AluY
CAediting_1146615	chr16_89986446_+	SINE	Alu	AluY
CAediting_1146616	chr16_89986578_+	SINE	Alu	AluY
CAediting_1146617	chr16_89986590_+	SINE	Alu	AluY
CAediting_1146619	chr16_89987825_+	SINE	Alu	AluY
CAediting_1146620	chr16_89987891_+	SINE	Alu	AluJr4
CAediting_1146621	chr16_89987895_+	SINE	Alu	AluJr4
CAediting_1146622	chr16_89987896_+	SINE	Alu	AluJr4
CAediting_1146623	chr16_89987901_+	SINE	Alu	AluJr4
CAediting_1146624	chr16_89987925_+	SINE	Alu	AluJr4
CAediting_1146625	chr16_89987928_+	SINE	Alu	AluJr4
CAediting_1146626	chr16_89987931_+	SINE	Alu	AluJr4
CAediting_1146627	chr16_89987938_+	SINE	Alu	AluJr4
CAediting_1146628	chr16_89987941_+	SINE	Alu	AluJr4
CAediting_1146629	chr16_89987955_+	SINE	Alu	AluJr4
CAediting_1146630	chr16_89987963_+	SINE	Alu	AluJr4
CAediting_1146631	chr16_89987968_+	SINE	Alu	AluJr4
CAediting_1146632	chr16_89987990_+	SINE	Alu	AluJr4
CAediting_1146633	chr16_89988000_+	SINE	Alu	AluJr4
CAediting_1146634	chr16_89988018_+	SINE	Alu	AluJr4
CAediting_1146635	chr16_89988036_+	SINE	Alu	AluJr4
CAediting_1146636	chr16_89988040_+	SINE	Alu	AluJr4
CAediting_1146637	chr16_89988047_+	SINE	Alu	AluJr4
CAediting_1146638	chr16_89988053_+	SINE	Alu	AluJr4
CAediting_1146639	chr16_89988057_+	SINE	Alu	AluJr4
CAediting_1146640	chr16_89988062_+	SINE	Alu	AluJr4
CAediting_1146641	chr16_89988063_+	SINE	Alu	AluJr4
CAediting_1146642	chr16_89988071_+	SINE	Alu	AluJr4
CAediting_1146643	chr16_89988084_+	SINE	Alu	AluJr4
CAediting_1146644	chr16_89988090_+	SINE	Alu	AluJr4
CAediting_1146645	chr16_89988104_+	SINE	Alu	AluJr4
CAediting_1146647	chr16_89988209_+	SINE	Alu	AluJb
CAediting_1146648	chr16_89988213_+	SINE	Alu	AluJb
CAediting_1146649	chr16_89988215_+	SINE	Alu	AluJb
CAediting_1146650	chr16_89988233_+	SINE	Alu	AluJb
CAediting_1146651	chr16_89988257_+	SINE	Alu	AluJb
CAediting_1146652	chr16_89988264_+	SINE	Alu	AluJb
CAediting_1146653	chr16_89988277_+	SINE	Alu	AluJb
CAediting_1146654	chr16_89988287_+	SINE	Alu	AluJb
CAediting_1146655	chr16_89988290_+	SINE	Alu	AluJb
CAediting_1146656	chr16_89988293_+	SINE	Alu	AluJb
CAediting_1146657	chr16_89988302_+	SINE	Alu	AluJb
CAediting_1146658	chr16_89988307_+	SINE	Alu	AluJb
CAediting_1146659	chr16_89988319_+	SINE	Alu	AluJb
CAediting_1146660	chr16_89988325_+	SINE	Alu	AluJb
CAediting_1146661	chr16_89988326_+	SINE	Alu	AluJb
CAediting_1146662	chr16_89988329_+	SINE	Alu	AluJb
CAediting_1146663	chr16_89988335_+	SINE	Alu	AluJb
CAediting_1146664	chr16_89988351_+	SINE	Alu	AluJb
CAediting_1146665	chr16_89988352_+	SINE	Alu	AluJb
CAediting_1146666	chr16_89988355_+	SINE	Alu	AluJb
CAediting_1146667	chr16_89988356_+	SINE	Alu	AluJb
CAediting_1146668	chr16_89988370_+	SINE	Alu	AluJb
CAediting_1146669	chr16_89988373_+	SINE	Alu	AluJb
CAediting_1146670	chr16_89988390_+	SINE	Alu	AluJb
CAediting_1146671	chr16_89988399_+	SINE	Alu	AluJb
CAediting_1146672	chr16_89988411_+	SINE	Alu	AluJb
CAediting_1146673	chr16_89988419_+	SINE	Alu	AluJb
CAediting_1146674	chr16_89988424_+	SINE	Alu	AluJb
CAediting_1146675	chr16_89988429_+	SINE	Alu	AluJb
CAediting_1146676	chr16_89988433_+	SINE	Alu	AluJb
CAediting_1146677	chr16_89988452_+	SINE	Alu	AluJb
CAediting_1146678	chr16_89988464_+	SINE	Alu	AluJb
CAediting_1146679	chr16_89988482_+	SINE	Alu	AluJb
CAediting_1146680	chr16_89988496_+	SINE	Alu	AluJo
CAediting_1146681	chr16_89988508_+	SINE	Alu	AluJo
CAediting_1146682	chr16_89988559_+	SINE	Alu	AluJo
CAediting_1146683	chr16_89988572_+	SINE	Alu	AluJo
CAediting_1146684	chr16_89988586_+	SINE	Alu	AluJo
CAediting_1146685	chr16_89988587_+	SINE	Alu	AluJo
CAediting_1146686	chr16_89988599_+	SINE	Alu	AluJo
CAediting_1146687	chr16_89989840_+	SINE	Alu	AluYi6
CAediting_1146688	chr16_89989848_+	SINE	Alu	AluYi6
CAediting_1146691	chr16_89996256_+	LINE	L1	L1MB7
CAediting_1146692	chr16_89997655_+	SINE	Alu	AluSq
CAediting_1146693	chr16_89997740_+	SINE	Alu	AluSq
CAediting_1146694	chr16_89997748_+	SINE	Alu	AluSq

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RNA A-to-I editing events in the alternative splicing sites for AFG3L1P

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000223959.7.AFG3L1P.

Correlation between RNA A-to-I editing and PSI for ENSG00000223959.7.AFG3L1P.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for AFG3L1P

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for AFG3L1P

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for AFG3L1P

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for AFG3L1P

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for AFG3L1P

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
BRCA	CAediting_1146658	chr16_89988307_+	0.0267313050994254	0.274807059351943	.	.	.	.
LUAD	CAediting_1146658	chr16_89988307_+	0.0274897101193839	0.308759718230304	.	.	.	.
STAD	CAediting_1146658	chr16_89988307_+	.	.	0.0109910516152152	0.331621596414255	.	.

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Relation with cancer stages for AFG3L1P

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
ESCA	clinical_stage	CAediting_1146597	chr16_89985052_+	0.0105053185723183	-0.467758949298787
ESCA	pathologic_stage	CAediting_1146584	chr16_89984987_+	0.0120454658737103	0.359667042916196
ESCA	pathologic_stage	CAediting_1146639	chr16_89988057_+	0.0361303615712219	0.278208341876079
KIRC	pathologic_stage	CAediting_1146639	chr16_89988057_+	0.0191587291462376	0.306796518423452

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Relation with survival for AFG3L1P

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for AFG3L1P

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for AFG3L1P

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene