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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: CLYBL (CAeditome ID:171425)

Gene summary for CLYBL

check button Gene summary
Gene informationGene symbol

CLYBL

Gene ID

171425

Gene namecitramalyl-CoA lyase
SynonymsCLB
Cytomap

13q32.3

Type of geneprotein-coding
Descriptioncitramalyl-CoA lyase, mitochondrial(3S)-malyl-CoA thioesterasebeta-methylmalate synthasecitrate lyase beta likecitrate lyase subunit beta-like protein, mitochondrialmalate synthase
Modification date20210518
UniProtAcc

Q8N0X4

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
CLYBL

GO:0000287

Citramalyl-CoA lyase, mitochondrial

24334609

CLYBL

GO:0000287

Citramalyl-CoA lyase, mitochondrial

29056341

CLYBL

GO:0004474

Citramalyl-CoA lyase, mitochondrial

24334609

CLYBL

GO:0004474

Citramalyl-CoA lyase, mitochondrial

29056341

CLYBL

GO:0047777

Citramalyl-CoA lyase, mitochondrial

29056341

CLYBL

GO:0070207

Citramalyl-CoA lyase, mitochondrial

29056341

CLYBL

GO:0106064

Citramalyl-CoA lyase, mitochondrial

29056341


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RNA A-to-I events for CLYBL

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000125246.14

check button RNA A-to-I editing events in Cancer.
CAediting_971429(99607883, +), CAediting_971430(99607893, +), CAediting_971431(99612482, +), CAediting_971432(99612609, +), CAediting_971433(99618369, +), CAediting_971434(99620521, +), CAediting_971435(99620560, +), CAediting_971436(99620565, +), CAediting_971437(99620580, +), CAediting_971438(99620589, +), CAediting_971439(99620590, +), CAediting_971440(99620595, +), CAediting_971441(99620597, +), CAediting_971442(99620598, +), CAediting_971443(99620599, +), CAediting_971444(99620600, +), CAediting_971445(99620617, +), CAediting_971446(99620618, +), CAediting_971447(99620620, +), CAediting_971448(99620623, +), CAediting_971449(99620625, +), CAediting_971450(99620629, +), CAediting_971451(99620635, +), CAediting_971452(99620662, +), CAediting_971453(99620666, +), CAediting_971454(99620670, +), CAediting_971455(99620673, +), CAediting_971456(99620689, +), CAediting_971457(99620696, +), CAediting_971458(99620697, +), CAediting_971459(99620698, +), CAediting_971460(99620705, +), CAediting_971461(99620727, +), CAediting_971462(99620729, +), CAediting_971463(99620763, +), CAediting_971464(99622901, +), CAediting_971465(99622958, +), CAediting_971466(99622966, +), CAediting_971467(99623839, +), CAediting_971468(99623844, +), CAediting_971469(99623880, +), CAediting_971470(99631779, +), CAediting_971471(99631782, +), CAediting_971472(99631796, +), CAediting_971473(99631853, +), CAediting_971474(99631863, +), CAediting_971475(99632513, +), CAediting_971476(99632560, +), CAediting_971477(99632624, +), CAediting_971478(99632639, +), CAediting_971479(99632652, +), CAediting_971480(99632666, +), CAediting_971481(99632969, +), CAediting_971482(99632979, +), CAediting_971483(99633061, +), CAediting_971484(99633064, +), CAediting_971485(99633094, +), CAediting_971486(99633131, +), CAediting_971487(99633132, +), CAediting_971488(99633139, +), CAediting_971489(99633143, +), CAediting_971490(99633262, +), CAediting_971491(99633271, +), CAediting_971492(99633276, +), CAediting_971493(99633285, +), CAediting_971494(99633290, +), CAediting_971495(99633299, +), CAediting_971496(99633305, +), CAediting_971497(99633308, +), CAediting_971498(99633344, +), CAediting_971499(99633354, +), CAediting_971500(99633361, +), CAediting_971501(99633362, +), CAediting_971502(99633404, +), CAediting_971503(99633415, +), CAediting_971504(99633445, +), CAediting_971505(99633455, +), CAediting_971506(99633484, +), CAediting_971507(99635174, +), CAediting_971508(99637150, +), CAediting_971509(99637559, +), CAediting_971510(99638025, +), CAediting_971511(99638193, +), CAediting_971512(99639637, +), CAediting_971513(99642548, +), CAediting_971514(99642549, +), CAediting_971515(99643847, +), CAediting_971516(99643850, +), CAediting_971517(99643859, +), CAediting_971518(99643911, +), CAediting_971519(99643926, +), CAediting_971520(99649809, +), CAediting_971521(99650361, +), CAediting_971522(99668429, +), CAediting_971523(99668438, +), CAediting_971524(99675923, +), CAediting_971525(99679215, +), CAediting_971526(99696676, +), CAediting_971527(99708839, +), CAediting_971528(99708972, +), CAediting_971529(99717194, +), CAediting_971530(99717197, +), CAediting_971531(99732333, +), CAediting_971532(99732335, +), CAediting_971533(99773988, +), CAediting_971534(99774044, +), CAediting_971535(99775578, +), CAediting_971536(99805076, +), CAediting_971537(99840629, +), CAediting_971538(99840639, +), CAediting_971539(99848892, +), CAediting_971540(99877716, +), CAediting_971541(99877771, +), CAediting_971542(99877774, +), CAediting_971543(99877796, +), CAediting_971544(99881522, +), CAediting_971545(99881523, +), CAediting_971546(99881527, +), CAediting_971547(99881535, +), CAediting_971548(99881552, +), CAediting_971549(99883425, +),

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RNA editing positional annotations for CLYBL using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_971429chr13_99607883_+intronic
CAediting_971430chr13_99607893_+intronic
CAediting_971431chr13_99612482_+intronic
CAediting_971432chr13_99612609_+intronic
CAediting_971433chr13_99618369_+intronic
CAediting_971434chr13_99620521_+intronic
CAediting_971435chr13_99620560_+intronic
CAediting_971436chr13_99620565_+intronic
CAediting_971437chr13_99620580_+intronic
CAediting_971438chr13_99620589_+intronic
CAediting_971439chr13_99620590_+intronic
CAediting_971440chr13_99620595_+intronic
CAediting_971441chr13_99620597_+intronic
CAediting_971442chr13_99620598_+intronic
CAediting_971443chr13_99620599_+intronic
CAediting_971444chr13_99620600_+intronic
CAediting_971445chr13_99620617_+intronic
CAediting_971446chr13_99620618_+intronic
CAediting_971447chr13_99620620_+intronic
CAediting_971448chr13_99620623_+intronic
CAediting_971449chr13_99620625_+intronic
CAediting_971450chr13_99620629_+intronic
CAediting_971451chr13_99620635_+intronic
CAediting_971452chr13_99620662_+intronic
CAediting_971453chr13_99620666_+intronic
CAediting_971454chr13_99620670_+intronic
CAediting_971455chr13_99620673_+intronic
CAediting_971456chr13_99620689_+intronic
CAediting_971457chr13_99620696_+intronic
CAediting_971458chr13_99620697_+intronic
CAediting_971459chr13_99620698_+intronic
CAediting_971460chr13_99620705_+intronic
CAediting_971461chr13_99620727_+intronic
CAediting_971462chr13_99620729_+intronic
CAediting_971463chr13_99620763_+intronic
CAediting_971464chr13_99622901_+intronic
CAediting_971465chr13_99622958_+intronic
CAediting_971466chr13_99622966_+intronic
CAediting_971467chr13_99623839_+intronic
CAediting_971468chr13_99623844_+intronic
CAediting_971469chr13_99623880_+intronic
CAediting_971470chr13_99631779_+intronic
CAediting_971471chr13_99631782_+intronic
CAediting_971472chr13_99631796_+intronic
CAediting_971473chr13_99631853_+intronic
CAediting_971474chr13_99631863_+intronic
CAediting_971475chr13_99632513_+intronic
CAediting_971476chr13_99632560_+intronic
CAediting_971477chr13_99632624_+intronic
CAediting_971478chr13_99632639_+intronic
CAediting_971479chr13_99632652_+intronic
CAediting_971480chr13_99632666_+intronic
CAediting_971481chr13_99632969_+intronic
CAediting_971482chr13_99632979_+intronic
CAediting_971483chr13_99633061_+intronic
CAediting_971484chr13_99633064_+intronic
CAediting_971485chr13_99633094_+intronic
CAediting_971486chr13_99633131_+intronic
CAediting_971487chr13_99633132_+intronic
CAediting_971488chr13_99633139_+intronic
CAediting_971489chr13_99633143_+intronic
CAediting_971490chr13_99633262_+intronic
CAediting_971491chr13_99633271_+intronic
CAediting_971492chr13_99633276_+intronic
CAediting_971493chr13_99633285_+intronic
CAediting_971494chr13_99633290_+intronic
CAediting_971495chr13_99633299_+intronic
CAediting_971496chr13_99633305_+intronic
CAediting_971497chr13_99633308_+intronic
CAediting_971498chr13_99633344_+intronic
CAediting_971499chr13_99633354_+intronic
CAediting_971500chr13_99633361_+intronic
CAediting_971501chr13_99633362_+intronic
CAediting_971502chr13_99633404_+intronic
CAediting_971503chr13_99633415_+intronic
CAediting_971504chr13_99633445_+intronic
CAediting_971505chr13_99633455_+intronic
CAediting_971506chr13_99633484_+intronic
CAediting_971507chr13_99635174_+intronic
CAediting_971508chr13_99637150_+intronic
CAediting_971509chr13_99637559_+intronic
CAediting_971510chr13_99638025_+intronic
CAediting_971511chr13_99638193_+intronic
CAediting_971512chr13_99639637_+intronic
CAediting_971513chr13_99642548_+intronic
CAediting_971514chr13_99642549_+intronic
CAediting_971515chr13_99643847_+intronic
CAediting_971516chr13_99643850_+intronic
CAediting_971517chr13_99643859_+intronic
CAediting_971518chr13_99643911_+intronic
CAediting_971519chr13_99643926_+intronic
CAediting_971520chr13_99649809_+intronic
CAediting_971521chr13_99650361_+intronic
CAediting_971522chr13_99668429_+intronic
CAediting_971523chr13_99668438_+intronic
CAediting_971524chr13_99675923_+intronic
CAediting_971525chr13_99679215_+intronic
CAediting_971526chr13_99696676_+intronic
CAediting_971527chr13_99708839_+intronic
CAediting_971528chr13_99708972_+intronic
CAediting_971529chr13_99717194_+intronic
CAediting_971530chr13_99717197_+intronic
CAediting_971531chr13_99732333_+intronic
CAediting_971532chr13_99732335_+intronic
CAediting_971533chr13_99773988_+intronic
CAediting_971534chr13_99774044_+intronic
CAediting_971535chr13_99775578_+intronic
CAediting_971536chr13_99805076_+intronic
CAediting_971537chr13_99840629_+intronic
CAediting_971538chr13_99840639_+intronic
CAediting_971539chr13_99848892_+intronic
CAediting_971540chr13_99877716_+intronic
CAediting_971541chr13_99877771_+intronic
CAediting_971542chr13_99877774_+intronic
CAediting_971543chr13_99877796_+intronic
CAediting_971544chr13_99881522_+intronic
CAediting_971545chr13_99881523_+intronic
CAediting_971546chr13_99881527_+intronic
CAediting_971547chr13_99881535_+intronic
CAediting_971548chr13_99881552_+intronic
CAediting_971549chr13_99883425_+intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_971429chr13_99607883_+SINEAluAluSz6
CAediting_971430chr13_99607893_+SINEAluAluSz6
CAediting_971431chr13_99612482_+SINEAluAluJb
CAediting_971432chr13_99612609_+SINEAluAluJb
CAediting_971433chr13_99618369_+SINEAluAluSx1
CAediting_971434chr13_99620521_+SINEAluAluSg
CAediting_971435chr13_99620560_+SINEAluAluSg
CAediting_971436chr13_99620565_+SINEAluAluSg
CAediting_971437chr13_99620580_+SINEAluAluSg
CAediting_971438chr13_99620589_+SINEAluAluSg
CAediting_971439chr13_99620590_+SINEAluAluSg
CAediting_971440chr13_99620595_+SINEAluAluSg
CAediting_971441chr13_99620597_+SINEAluAluSg
CAediting_971442chr13_99620598_+SINEAluAluSg
CAediting_971443chr13_99620599_+SINEAluAluSg
CAediting_971444chr13_99620600_+SINEAluAluSg
CAediting_971445chr13_99620617_+SINEAluAluSg
CAediting_971446chr13_99620618_+SINEAluAluSg
CAediting_971447chr13_99620620_+SINEAluAluSg
CAediting_971448chr13_99620623_+SINEAluAluSg
CAediting_971449chr13_99620625_+SINEAluAluSg
CAediting_971450chr13_99620629_+SINEAluAluSg
CAediting_971451chr13_99620635_+SINEAluAluSg
CAediting_971452chr13_99620662_+SINEAluAluSg
CAediting_971453chr13_99620666_+SINEAluAluSg
CAediting_971454chr13_99620670_+SINEAluAluSg
CAediting_971455chr13_99620673_+SINEAluAluSg
CAediting_971456chr13_99620689_+SINEAluAluSg
CAediting_971457chr13_99620696_+SINEAluAluSg
CAediting_971458chr13_99620697_+SINEAluAluSg
CAediting_971459chr13_99620698_+SINEAluAluSg
CAediting_971460chr13_99620705_+SINEAluAluSg
CAediting_971461chr13_99620727_+SINEAluAluSg
CAediting_971462chr13_99620729_+SINEAluAluSg
CAediting_971463chr13_99620763_+SINEAluAluSg
CAediting_971464chr13_99622901_+SINEAluAluJr4
CAediting_971465chr13_99622958_+SINEAluAluJr4
CAediting_971466chr13_99622966_+SINEAluAluJr4
CAediting_971467chr13_99623839_+SINEAluAluSc8
CAediting_971468chr13_99623844_+SINEAluAluSc8
CAediting_971469chr13_99623880_+SINEAluAluSc8
CAediting_971470chr13_99631779_+SINEAluAluSc
CAediting_971471chr13_99631782_+SINEAluAluSc
CAediting_971472chr13_99631796_+SINEAluAluSc
CAediting_971473chr13_99631853_+SINEAluAluSc
CAediting_971474chr13_99631863_+SINEAluAluSc
CAediting_971475chr13_99632513_+SINEAluAluSx1
CAediting_971476chr13_99632560_+SINEAluAluSx1
CAediting_971477chr13_99632624_+SINEAluAluSx1
CAediting_971478chr13_99632639_+SINEAluAluSx1
CAediting_971479chr13_99632652_+SINEAluAluSx1
CAediting_971480chr13_99632666_+SINEAluAluSx1
CAediting_971481chr13_99632969_+SINEAluAluSz6
CAediting_971482chr13_99632979_+SINEAluAluSz6
CAediting_971483chr13_99633061_+SINEAluAluSz6
CAediting_971484chr13_99633064_+SINEAluAluSz6
CAediting_971485chr13_99633094_+SINEAluAluSz6
CAediting_971486chr13_99633131_+SINEAluAluSz6
CAediting_971487chr13_99633132_+SINEAluAluSz6
CAediting_971488chr13_99633139_+SINEAluAluSz6
CAediting_971489chr13_99633143_+SINEAluAluSz6
CAediting_971490chr13_99633262_+SINEAluAluSz6
CAediting_971491chr13_99633271_+SINEAluAluSz6
CAediting_971492chr13_99633276_+SINEAluAluSz6
CAediting_971493chr13_99633285_+SINEAluAluSz6
CAediting_971494chr13_99633290_+SINEAluAluSz6
CAediting_971495chr13_99633299_+SINEAluAluSz6
CAediting_971496chr13_99633305_+SINEAluAluSz6
CAediting_971497chr13_99633308_+SINEAluAluSz6
CAediting_971498chr13_99633344_+SINEAluAluSz6
CAediting_971499chr13_99633354_+SINEAluAluSz6
CAediting_971500chr13_99633361_+SINEAluAluSz6
CAediting_971501chr13_99633362_+SINEAluAluSz6
CAediting_971502chr13_99633404_+SINEAluAluSz6
CAediting_971503chr13_99633415_+SINEAluAluSz6
CAediting_971504chr13_99633445_+SINEAluAluSz6
CAediting_971505chr13_99633455_+SINEAluAluSz6
CAediting_971506chr13_99633484_+SINEAluAluSz6
CAediting_971508chr13_99637150_+SINEAluAluSz6
CAediting_971509chr13_99637559_+SINEAluAluSx
CAediting_971510chr13_99638025_+SINEAluAluJb
CAediting_971511chr13_99638193_+SINEAluAluJb
CAediting_971512chr13_99639637_+SINEAluAluJr
CAediting_971513chr13_99642548_+SINEAluAluJb
CAediting_971514chr13_99642549_+SINEAluAluJb
CAediting_971515chr13_99643847_+SINEAluAluSg
CAediting_971516chr13_99643850_+SINEAluAluSg
CAediting_971517chr13_99643859_+SINEAluAluSg
CAediting_971518chr13_99643911_+SINEAluAluSg
CAediting_971519chr13_99643926_+SINEAluAluSg
CAediting_971520chr13_99649809_+SINEAluAluJo
CAediting_971521chr13_99650361_+SINEAluAluJr4
CAediting_971522chr13_99668429_+SINEAluAluSx1
CAediting_971523chr13_99668438_+SINEAluAluSx1
CAediting_971524chr13_99675923_+SINEAluAluSx
CAediting_971525chr13_99679215_+SINEAluAluY
CAediting_971526chr13_99696676_+SINEAluAluJr
CAediting_971527chr13_99708839_+SINEAluAluSx4
CAediting_971528chr13_99708972_+SINEAluAluSx4
CAediting_971529chr13_99717194_+SINEAluAluSx
CAediting_971530chr13_99717197_+SINEAluAluSx
CAediting_971531chr13_99732333_+SINEAluAluJb
CAediting_971532chr13_99732335_+SINEAluAluJb
CAediting_971533chr13_99773988_+SINEAluAluJo
CAediting_971534chr13_99774044_+SINEAluAluJo
CAediting_971535chr13_99775578_+SINEAluAluJr
CAediting_971536chr13_99805076_+LINEL1L1MB3
CAediting_971537chr13_99840629_+SINEAluAluJb
CAediting_971538chr13_99840639_+SINEAluAluJb
CAediting_971539chr13_99848892_+SINEAluAluSx1
CAediting_971540chr13_99877716_+SINEAluAluSg
CAediting_971541chr13_99877771_+SINEAluAluSg
CAediting_971542chr13_99877774_+SINEAluAluSg
CAediting_971543chr13_99877796_+SINEAluAluSg
CAediting_971544chr13_99881522_+SINEAluAluJo
CAediting_971545chr13_99881523_+SINEAluAluJo
CAediting_971546chr13_99881527_+SINEAluAluJo
CAediting_971547chr13_99881535_+SINEAluAluJo
CAediting_971548chr13_99881552_+SINEAluAluJo
CAediting_971549chr13_99883425_+SINEAluAluSg

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RNA A-to-I editing events in the alternative splicing sites for CLYBL

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000125246.14.CLYBL.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000125246.14.CLYBL.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for CLYBL

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

check button Correlation between RNA A-to-I editing and gene expression.

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for CLYBL

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for CLYBL

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_748296chr10_51299626_+ENSG00000125246.14ENST00000376355hsa-miR-605-3p99893892998938998mer-1a9989387899893899142-14.99
CAediting_393chr1_1167164_+ENSG00000125246.14ENST00000376355hsa-miR-200b-3p99895493998954997mer-m89989547699895500149-19.47
CAediting_688080chr9_63819626_+ENSG00000125246.14ENST00000376355hsa-miR-4477b99893706998937127mer-m89989369099893713147-16
CAediting_1054808chr15_66496985_-ENSG00000125246.14ENST00000376355hsa-miR-451299893771998937777mer-m89989375999893778148-22.4
CAediting_1054808chr15_66496985_-ENSG00000125246.14ENST00000376355hsa-miR-451299895387998953937mer-m89989537099895394144-25.14
CAediting_1054808chr15_66496985_-ENSG00000125246.14ENST00000376355hsa-miR-451299896378998963858mer-1a9989636499896385140-19.02
CAediting_1368054chr19_46709310_-ENSG00000125246.14ENST00000376355hsa-miR-320e99895451998954577mer-m89989544199895458145-19.56
CAediting_86358chr1_109598906_+ENSG00000125246.14ENST00000376355hsa-miR-197-5p99893655998936617mer-m89989364099893662157-25.55
CAediting_86358chr1_109598906_+ENSG00000125246.14ENST00000376355hsa-miR-197-5p99894187998941926mer9989417299894193143-33.18
CAediting_86358chr1_109598906_+ENSG00000125246.14ENST00000376355hsa-miR-197-5p99891758998917647mer-m89989174299891765152-22.48
CAediting_86358chr1_109598906_+ENSG00000125246.14ENST00000376355hsa-miR-197-5p99891996998920027mer-m89989198399892003150-21.41
CAediting_77128chr1_85133844_+ENSG00000125246.14ENST00000376355hsa-miR-4423-3p99894750998947578mer-1a9989473799894757145-17.25
CAediting_228905chr2_188297554_+ENSG00000125246.14ENST00000376355hsa-miR-561-3p99892615998926228mer-1a9989259999892622159-14.29
CAediting_228905chr2_188297554_+ENSG00000125246.14ENST00000376355hsa-miR-561-3p99894137998941448mer-1a9989412499894144149-10.45
CAediting_396018chr5_1062918_-ENSG00000125246.14ENST00000376355hsa-miR-463599893707998937137mer-m89989369699893714148-19.98
CAediting_573000chr7_92204081_-ENSG00000125246.14ENST00000376355hsa-miR-1285-5p99892277998922837mer-m89989226499892284140-16.96
CAediting_468389chr6_31355314_-ENSG00000125246.14ENST00000376355hsa-miR-6891-5p99892748998927547mer-m89989273799892755153-21.99
CAediting_468389chr6_31355314_-ENSG00000125246.14ENST00000376355hsa-miR-6891-5p99893704998937118mer-1a9989369399893711140-16.31
CAediting_468389chr6_31355314_-ENSG00000125246.14ENST00000376355hsa-miR-6891-5p99894976998949827mer-m89989496599894983157-26.93
CAediting_1524209chrX_134546392_-ENSG00000125246.14ENST00000376355hsa-miR-503-5p99895437998954448mer-1a9989542299895444145-25.36

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_393chr1_1167164_+ENSG00000125246.14ENST00000376355hsa-miR-200b-3p99896674998966807mer-m89989666099896681147-8.49
CAediting_604450chr7_133034877_-ENSG00000125246.14ENST00000376355hsa-miR-365499893951998939577mer-m89989394199893958147-17.48
CAediting_688080chr9_63819626_+ENSG00000125246.14ENST00000376355hsa-miR-4477b99892584998925907mer-m89989256999892591154-11.85
CAediting_688081chr9_63819627_+ENSG00000125246.14ENST00000376355hsa-miR-4477b99892584998925907mer-m89989256999892591154-11.85
CAediting_1524209chrX_134546392_-ENSG00000125246.14ENST00000376355hsa-miR-503-5p99892655998926628mer-1a9989264199892662142-18.86
CAediting_1524209chrX_134546392_-ENSG00000125246.14ENST00000376355hsa-miR-503-5p99893825998938317mer-m89989381099893832155-25.88
CAediting_1229414chr17_67471546_+ENSG00000125246.14ENST00000376355hsa-miR-548aa99895647998956537mer-m89989563099895654140-10.23
CAediting_228905chr2_188297554_+ENSG00000125246.14ENST00000376355hsa-miR-561-3p99891968998919747mer-m89989195499891975146-7.3
CAediting_524911chr7_5495852_-ENSG00000125246.14ENST00000376355hsa-miR-589-3p99892690998926967mer-m89989267999892697150-22.45
CAediting_1351755chr19_40282625_-ENSG00000125246.14ENST00000376355hsa-miR-64199894760998947667mer-m89989474799894767149-15.64
CAediting_580943chr7_100356700_+ENSG00000125246.14ENST00000376355hsa-miR-6840-3p99891683998916897mer-m89989166999891690150-17.56
CAediting_580943chr7_100356700_+ENSG00000125246.14ENST00000376355hsa-miR-6840-3p99892059998920657mer-m89989204599892066140-19.19
CAediting_468389chr6_31355314_-ENSG00000125246.14ENST00000376355hsa-miR-6891-5p99892021998920266mer9989200999892027146-22

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for CLYBL

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for CLYBL

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)

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Relation with cancer stages for CLYBL

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.
STADpathologic_stageCAediting_971457chr13_99620696_+0.02165788994215340.2445551224987

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Relation with survival for CLYBL

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for CLYBL

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for CLYBL

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource