CAeditome Logo

Home

Download

Statistics

Examples

Help

Contact
Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: SPATA5 (CAeditome ID:166378)

Gene summary for SPATA5

check button Gene summary
Gene informationGene symbol

SPATA5

Gene ID

166378

Gene namespermatogenesis associated 5
SynonymsAFG2|EHLMRS|SPAF
Cytomap

4q28.1

Type of geneprotein-coding
DescriptionATPase family protein 2 homologATPase family gene 2 homologspermatogenesis associated factor SPAFspermatogenesis-associated factor proteinspermatogenesis-associated protein 5
Modification date20210531
UniProtAcc

Q8NB90

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
SPATA5

GO:0005737

ATPase family protein 2 homolog

0000054

SPATA5

GO:0005737

ATPase family protein 2 homolog

18445686

SPATA5

GO:0005819

ATPase family protein 2 homolog

18445686


Top

RNA A-to-I events for SPATA5

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000145375.7
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_382176(123029771, +), CAediting_382177(123045886, +), CAediting_382178(123045949, +), CAediting_382179(123045969, +), CAediting_382180(123045976, +), CAediting_382181(123045981, +), CAediting_382182(123046026, +), CAediting_382183(123046042, +), CAediting_382184(123075085, +), CAediting_382185(123076098, +), CAediting_382186(123076117, +), CAediting_382187(123076150, +), CAediting_382188(123076178, +), CAediting_382189(123119812, +), CAediting_382190(123119843, +), CAediting_382191(123120007, +), CAediting_382192(123126772, +), CAediting_382193(123132530, +), CAediting_382194(123132544, +), CAediting_382195(123132545, +), CAediting_382196(123136543, +), CAediting_382197(123163325, +), CAediting_382198(123163374, +), CAediting_382199(123163437, +), CAediting_382200(123179458, +), CAediting_382201(123179473, +), CAediting_382202(123180164, +), CAediting_382203(123180165, +), CAediting_382204(123181506, +), CAediting_382205(123192096, +), CAediting_382206(123197498, +), CAediting_382207(123197506, +), CAediting_382208(123207530, +), CAediting_382209(123219969, +), CAediting_382210(123220493, +), CAediting_382211(123220494, +), CAediting_382212(123220521, +), CAediting_382213(123220546, +), CAediting_382214(123221285, +), CAediting_382215(123297467, +), CAediting_382216(123314787, +), CAediting_382217(123314800, +), CAediting_382218(123314817, +), CAediting_382219(123314850, +), CAediting_382220(123314855, +), CAediting_382221(123314856, +), CAediting_382222(123314859, +), CAediting_382223(123314860, +), CAediting_382224(123314885, +), CAediting_382225(123314895, +), CAediting_382226(123314897, +), CAediting_382227(123314913, +), CAediting_382228(123314921, +), CAediting_382229(123314928, +), CAediting_382230(123314936, +), CAediting_382231(123314946, +), CAediting_382232(123314956, +), CAediting_382233(123314978, +), CAediting_382234(123314999, +), CAediting_382235(123315003, +), CAediting_382236(123315008, +), CAediting_382237(123315017, +), CAediting_382238(123315018, +), CAediting_382239(123315030, +), CAediting_382240(123315204, +), CAediting_382241(123315232, +), CAediting_382242(123315252, +), CAediting_382243(123315264, +), CAediting_382244(123315292, +), CAediting_382245(123315317, +), CAediting_382246(123315327, +), CAediting_382247(123315433, +), CAediting_382248(123315454, +), CAediting_382249(123315455, +), CAediting_382250(123315456, +), CAediting_382251(123315468, +), CAediting_382252(123315474, +), CAediting_382253(123315795, +), CAediting_382254(123315801, +), CAediting_382255(123315828, +), CAediting_382256(123315829, +), CAediting_382257(123315839, +), CAediting_382258(123315841, +), CAediting_382259(123315847, +), CAediting_382260(123315852, +), CAediting_382261(123315864, +), CAediting_382262(123315865, +), CAediting_382263(123315878, +), CAediting_382264(123315883, +), CAediting_382265(123315892, +), CAediting_382266(123315896, +), CAediting_382267(123315908, +), CAediting_382268(123315912, +), CAediting_382269(123315915, +), CAediting_382270(123315917, +), CAediting_382271(123315918, +), CAediting_382272(123315920, +), CAediting_382273(123315969, +), CAediting_382274(123315971, +), CAediting_382275(123316032, +), CAediting_382276(123316040, +), CAediting_382277(123316041, +), CAediting_382278(123316042, +), CAediting_382279(123316049, +), CAediting_382280(123316054, +), CAediting_382281(123316056, +), CAediting_382282(123316063, +), CAediting_382283(123316970, +), CAediting_382284(123316971, +), CAediting_382285(123316976, +), CAediting_382286(123316997, +), CAediting_382287(123317016, +), CAediting_382288(123317017, +), CAediting_382289(123317022, +), CAediting_382290(123317023, +), CAediting_382291(123317037, +), CAediting_382292(123317038, +), CAediting_382293(123317042, +), CAediting_382294(123317047, +), CAediting_382295(123317078, +), CAediting_382296(123317104, +), CAediting_382297(123317110, +), CAediting_382298(123317114, +), CAediting_382299(123317121, +), CAediting_382300(123317145, +), CAediting_382301(123317146, +), CAediting_382302(123317166, +), CAediting_382303(123317170, +), CAediting_382304(123317175, +), CAediting_382305(123317177, +), CAediting_382306(123317195, +), CAediting_382307(123317213, +), CAediting_382308(123318656, +), CAediting_382309(123318658, +), CAediting_382310(123318660, +), CAediting_382311(123318663, +), CAediting_382312(123318666, +), CAediting_382313(123318672, +), CAediting_382314(123318692, +), CAediting_382315(123318697, +), CAediting_382316(123318699, +), CAediting_382317(123318711, +), CAediting_382318(123318715, +), CAediting_382319(123318725, +), CAediting_382320(123318754, +),

Top

RNA editing positional annotations for SPATA5 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_382176chr4_123029771_+ncRNA_intronic
CAediting_382177chr4_123045886_+ncRNA_intronic
CAediting_382178chr4_123045949_+ncRNA_intronic
CAediting_382179chr4_123045969_+ncRNA_intronic
CAediting_382180chr4_123045976_+ncRNA_intronic
CAediting_382181chr4_123045981_+ncRNA_intronic
CAediting_382182chr4_123046026_+ncRNA_intronic
CAediting_382183chr4_123046042_+ncRNA_intronic
CAediting_382184chr4_123075085_+ncRNA_intronic
CAediting_382185chr4_123076098_+ncRNA_intronic
CAediting_382186chr4_123076117_+ncRNA_intronic
CAediting_382187chr4_123076150_+ncRNA_intronic
CAediting_382188chr4_123076178_+ncRNA_intronic
CAediting_382189chr4_123119812_+intronic
CAediting_382190chr4_123119843_+intronic
CAediting_382191chr4_123120007_+intronic
CAediting_382192chr4_123126772_+intronic
CAediting_382193chr4_123132530_+intronic
CAediting_382194chr4_123132544_+intronic
CAediting_382195chr4_123132545_+intronic
CAediting_382196chr4_123136543_+intronic
CAediting_382197chr4_123163325_+intronic
CAediting_382198chr4_123163374_+intronic
CAediting_382199chr4_123163437_+intronic
CAediting_382200chr4_123179458_+intronic
CAediting_382201chr4_123179473_+intronic
CAediting_382202chr4_123180164_+intronic
CAediting_382203chr4_123180165_+intronic
CAediting_382204chr4_123181506_+intronic
CAediting_382205chr4_123192096_+intronic
CAediting_382206chr4_123197498_+intronic
CAediting_382207chr4_123197506_+intronic
CAediting_382208chr4_123207530_+intronic
CAediting_382209chr4_123219969_+intronic
CAediting_382210chr4_123220493_+intronic
CAediting_382211chr4_123220494_+intronic
CAediting_382212chr4_123220521_+intronic
CAediting_382213chr4_123220546_+intronic
CAediting_382214chr4_123221285_+intronic
CAediting_382215chr4_123297467_+intronic
CAediting_382216chr4_123314787_+UTR3
CAediting_382217chr4_123314800_+UTR3
CAediting_382218chr4_123314817_+UTR3
CAediting_382219chr4_123314850_+UTR3
CAediting_382220chr4_123314855_+UTR3
CAediting_382221chr4_123314856_+UTR3
CAediting_382222chr4_123314859_+UTR3
CAediting_382223chr4_123314860_+UTR3
CAediting_382224chr4_123314885_+UTR3
CAediting_382225chr4_123314895_+UTR3
CAediting_382226chr4_123314897_+UTR3
CAediting_382227chr4_123314913_+UTR3
CAediting_382228chr4_123314921_+UTR3
CAediting_382229chr4_123314928_+UTR3
CAediting_382230chr4_123314936_+UTR3
CAediting_382231chr4_123314946_+UTR3
CAediting_382232chr4_123314956_+UTR3
CAediting_382233chr4_123314978_+UTR3
CAediting_382234chr4_123314999_+UTR3
CAediting_382235chr4_123315003_+UTR3
CAediting_382236chr4_123315008_+UTR3
CAediting_382237chr4_123315017_+UTR3
CAediting_382238chr4_123315018_+UTR3
CAediting_382239chr4_123315030_+UTR3
CAediting_382240chr4_123315204_+UTR3
CAediting_382241chr4_123315232_+UTR3
CAediting_382242chr4_123315252_+UTR3
CAediting_382243chr4_123315264_+UTR3
CAediting_382244chr4_123315292_+UTR3
CAediting_382245chr4_123315317_+UTR3
CAediting_382246chr4_123315327_+UTR3
CAediting_382247chr4_123315433_+UTR3
CAediting_382248chr4_123315454_+UTR3
CAediting_382249chr4_123315455_+UTR3
CAediting_382250chr4_123315456_+UTR3
CAediting_382251chr4_123315468_+UTR3
CAediting_382252chr4_123315474_+UTR3
CAediting_382253chr4_123315795_+UTR3
CAediting_382254chr4_123315801_+UTR3
CAediting_382255chr4_123315828_+UTR3
CAediting_382256chr4_123315829_+UTR3
CAediting_382257chr4_123315839_+UTR3
CAediting_382258chr4_123315841_+UTR3
CAediting_382259chr4_123315847_+UTR3
CAediting_382260chr4_123315852_+UTR3
CAediting_382261chr4_123315864_+UTR3
CAediting_382262chr4_123315865_+UTR3
CAediting_382263chr4_123315878_+UTR3
CAediting_382264chr4_123315883_+UTR3
CAediting_382265chr4_123315892_+UTR3
CAediting_382266chr4_123315896_+UTR3
CAediting_382267chr4_123315908_+UTR3
CAediting_382268chr4_123315912_+UTR3
CAediting_382269chr4_123315915_+UTR3
CAediting_382270chr4_123315917_+UTR3
CAediting_382271chr4_123315918_+UTR3
CAediting_382272chr4_123315920_+UTR3
CAediting_382273chr4_123315969_+UTR3
CAediting_382274chr4_123315971_+UTR3
CAediting_382275chr4_123316032_+UTR3
CAediting_382276chr4_123316040_+UTR3
CAediting_382277chr4_123316041_+UTR3
CAediting_382278chr4_123316042_+UTR3
CAediting_382279chr4_123316049_+UTR3
CAediting_382280chr4_123316054_+UTR3
CAediting_382281chr4_123316056_+UTR3
CAediting_382282chr4_123316063_+UTR3
CAediting_382283chr4_123316970_+UTR3
CAediting_382284chr4_123316971_+UTR3
CAediting_382285chr4_123316976_+UTR3
CAediting_382286chr4_123316997_+UTR3
CAediting_382287chr4_123317016_+UTR3
CAediting_382288chr4_123317017_+UTR3
CAediting_382289chr4_123317022_+UTR3
CAediting_382290chr4_123317023_+UTR3
CAediting_382291chr4_123317037_+UTR3
CAediting_382292chr4_123317038_+UTR3
CAediting_382293chr4_123317042_+UTR3
CAediting_382294chr4_123317047_+UTR3
CAediting_382295chr4_123317078_+UTR3
CAediting_382296chr4_123317104_+UTR3
CAediting_382297chr4_123317110_+UTR3
CAediting_382298chr4_123317114_+UTR3
CAediting_382299chr4_123317121_+UTR3
CAediting_382300chr4_123317145_+UTR3
CAediting_382301chr4_123317146_+UTR3
CAediting_382302chr4_123317166_+UTR3
CAediting_382303chr4_123317170_+UTR3
CAediting_382304chr4_123317175_+UTR3
CAediting_382305chr4_123317177_+UTR3
CAediting_382306chr4_123317195_+UTR3
CAediting_382307chr4_123317213_+UTR3
CAediting_382308chr4_123318656_+UTR3
CAediting_382309chr4_123318658_+UTR3
CAediting_382310chr4_123318660_+UTR3
CAediting_382311chr4_123318663_+UTR3
CAediting_382312chr4_123318666_+UTR3
CAediting_382313chr4_123318672_+UTR3
CAediting_382314chr4_123318692_+UTR3
CAediting_382315chr4_123318697_+UTR3
CAediting_382316chr4_123318699_+UTR3
CAediting_382317chr4_123318711_+UTR3
CAediting_382318chr4_123318715_+UTR3
CAediting_382319chr4_123318725_+UTR3
CAediting_382320chr4_123318754_+UTR3

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_382176chr4_123029771_+SINEAluAluJr4
CAediting_382177chr4_123045886_+SINEAluAluSx
CAediting_382178chr4_123045949_+SINEAluAluSx
CAediting_382179chr4_123045969_+SINEAluAluSx
CAediting_382180chr4_123045976_+SINEAluAluSx
CAediting_382181chr4_123045981_+SINEAluAluSx
CAediting_382182chr4_123046026_+SINEAluAluSx
CAediting_382183chr4_123046042_+SINEAluAluSx
CAediting_382184chr4_123075085_+SINEAluAluSg
CAediting_382185chr4_123076098_+SINEAluAluJr
CAediting_382186chr4_123076117_+SINEAluAluJr
CAediting_382187chr4_123076150_+SINEAluAluJr
CAediting_382188chr4_123076178_+SINEAluAluJr
CAediting_382189chr4_123119812_+LTRERVL-MaLRTHE1D
CAediting_382190chr4_123119843_+LTRERVL-MaLRTHE1D
CAediting_382191chr4_123120007_+LTRERVL-MaLRTHE1D
CAediting_382192chr4_123126772_+LTRERVL-MaLRTHE1C
CAediting_382193chr4_123132530_+LINEL1L1M2
CAediting_382194chr4_123132544_+LINEL1L1M2
CAediting_382195chr4_123132545_+LINEL1L1M2
CAediting_382196chr4_123136543_+SINEAluAluY
CAediting_382197chr4_123163325_+SINEAluAluSx3
CAediting_382198chr4_123163374_+SINEAluAluSx3
CAediting_382199chr4_123163437_+SINEAluAluSx3
CAediting_382200chr4_123179458_+SINEAluAluSx
CAediting_382201chr4_123179473_+SINEAluAluSx
CAediting_382202chr4_123180164_+SINEAluAluSz
CAediting_382203chr4_123180165_+SINEAluAluSz
CAediting_382204chr4_123181506_+SINEAluAluJo
CAediting_382205chr4_123192096_+SINEAluAluSx1
CAediting_382206chr4_123197498_+SINEAluAluSx3
CAediting_382207chr4_123197506_+SINEAluAluSx3
CAediting_382208chr4_123207530_+SINEAluAluJb
CAediting_382209chr4_123219969_+SINEAluAluSq4
CAediting_382210chr4_123220493_+SINEAluAluSx4
CAediting_382211chr4_123220494_+SINEAluAluSx4
CAediting_382212chr4_123220521_+SINEAluAluSx4
CAediting_382213chr4_123220546_+SINEAluAluSx4
CAediting_382214chr4_123221285_+SINEAluAluJr
CAediting_382215chr4_123297467_+SINEAluAluY
CAediting_382216chr4_123314787_+SINEAluAluSx
CAediting_382217chr4_123314800_+SINEAluAluSx
CAediting_382218chr4_123314817_+SINEAluAluSx
CAediting_382219chr4_123314850_+SINEAluAluSx
CAediting_382220chr4_123314855_+SINEAluAluSx
CAediting_382221chr4_123314856_+SINEAluAluSx
CAediting_382222chr4_123314859_+SINEAluAluSx
CAediting_382223chr4_123314860_+SINEAluAluSx
CAediting_382224chr4_123314885_+SINEAluAluSx
CAediting_382225chr4_123314895_+SINEAluAluSx
CAediting_382226chr4_123314897_+SINEAluAluSx
CAediting_382227chr4_123314913_+SINEAluAluSx
CAediting_382228chr4_123314921_+SINEAluAluSx
CAediting_382229chr4_123314928_+SINEAluAluSx
CAediting_382230chr4_123314936_+SINEAluAluSx
CAediting_382231chr4_123314946_+SINEAluAluSx
CAediting_382232chr4_123314956_+SINEAluAluSx
CAediting_382233chr4_123314978_+SINEAluAluSx
CAediting_382234chr4_123314999_+SINEAluAluSx
CAediting_382235chr4_123315003_+SINEAluAluSx
CAediting_382236chr4_123315008_+SINEAluAluSx
CAediting_382237chr4_123315017_+SINEAluAluSx
CAediting_382238chr4_123315018_+SINEAluAluSx
CAediting_382239chr4_123315030_+SINEAluAluSx
CAediting_382240chr4_123315204_+SINEAluAluY
CAediting_382241chr4_123315232_+SINEAluAluY
CAediting_382242chr4_123315252_+SINEAluAluY
CAediting_382243chr4_123315264_+SINEAluAluY
CAediting_382244chr4_123315292_+SINEAluAluY
CAediting_382245chr4_123315317_+SINEAluAluY
CAediting_382246chr4_123315327_+SINEAluAluY
CAediting_382247chr4_123315433_+SINEAluAluY
CAediting_382248chr4_123315454_+SINEAluAluY
CAediting_382249chr4_123315455_+SINEAluAluY
CAediting_382250chr4_123315456_+SINEAluAluY
CAediting_382251chr4_123315468_+SINEAluAluY
CAediting_382252chr4_123315474_+SINEAluAluY
CAediting_382253chr4_123315795_+SINEAluAluJr4
CAediting_382254chr4_123315801_+SINEAluAluJr4
CAediting_382255chr4_123315828_+SINEAluAluJr4
CAediting_382256chr4_123315829_+SINEAluAluJr4
CAediting_382257chr4_123315839_+SINEAluAluJr4
CAediting_382258chr4_123315841_+SINEAluAluJr4
CAediting_382259chr4_123315847_+SINEAluAluJr4
CAediting_382260chr4_123315852_+SINEAluAluJr4
CAediting_382261chr4_123315864_+SINEAluAluJr4
CAediting_382262chr4_123315865_+SINEAluAluJr4
CAediting_382263chr4_123315878_+SINEAluAluJr4
CAediting_382264chr4_123315883_+SINEAluAluJr4
CAediting_382265chr4_123315892_+SINEAluAluJr4
CAediting_382266chr4_123315896_+SINEAluAluJr4
CAediting_382267chr4_123315908_+SINEAluAluJr4
CAediting_382268chr4_123315912_+SINEAluAluJr4
CAediting_382269chr4_123315915_+SINEAluAluJr4
CAediting_382270chr4_123315917_+SINEAluAluJr4
CAediting_382271chr4_123315918_+SINEAluAluJr4
CAediting_382272chr4_123315920_+SINEAluAluJr4
CAediting_382273chr4_123315969_+SINEAluAluJr4
CAediting_382274chr4_123315971_+SINEAluAluJr4
CAediting_382275chr4_123316032_+SINEAluAluJr4
CAediting_382276chr4_123316040_+SINEAluAluJr4
CAediting_382277chr4_123316041_+SINEAluAluJr4
CAediting_382278chr4_123316042_+SINEAluAluJr4
CAediting_382279chr4_123316049_+SINEAluAluJr4
CAediting_382280chr4_123316054_+SINEAluAluJr4
CAediting_382281chr4_123316056_+SINEAluAluJr4
CAediting_382282chr4_123316063_+SINEAluAluJr4
CAediting_382283chr4_123316970_+SINEAluAluY
CAediting_382284chr4_123316971_+SINEAluAluY
CAediting_382285chr4_123316976_+SINEAluAluY
CAediting_382286chr4_123316997_+SINEAluAluY
CAediting_382287chr4_123317016_+SINEAluAluY
CAediting_382288chr4_123317017_+SINEAluAluY
CAediting_382289chr4_123317022_+SINEAluAluY
CAediting_382290chr4_123317023_+SINEAluAluY
CAediting_382291chr4_123317037_+SINEAluAluY
CAediting_382292chr4_123317038_+SINEAluAluY
CAediting_382293chr4_123317042_+SINEAluAluY
CAediting_382294chr4_123317047_+SINEAluAluY
CAediting_382295chr4_123317078_+SINEAluAluY
CAediting_382296chr4_123317104_+SINEAluAluY
CAediting_382297chr4_123317110_+SINEAluAluY
CAediting_382298chr4_123317114_+SINEAluAluY
CAediting_382299chr4_123317121_+SINEAluAluY
CAediting_382300chr4_123317145_+SINEAluAluY
CAediting_382301chr4_123317146_+SINEAluAluY
CAediting_382302chr4_123317166_+SINEAluAluY
CAediting_382303chr4_123317170_+SINEAluAluY
CAediting_382304chr4_123317175_+SINEAluAluY
CAediting_382305chr4_123317177_+SINEAluAluY
CAediting_382306chr4_123317195_+SINEAluAluY
CAediting_382307chr4_123317213_+SINEAluAluY
CAediting_382308chr4_123318656_+SINEAluFLAM_A
CAediting_382309chr4_123318658_+SINEAluFLAM_A
CAediting_382310chr4_123318660_+SINEAluFLAM_A
CAediting_382311chr4_123318663_+SINEAluFLAM_A
CAediting_382312chr4_123318666_+SINEAluFLAM_A
CAediting_382313chr4_123318672_+SINEAluFLAM_A
CAediting_382314chr4_123318692_+SINEAluFLAM_A
CAediting_382315chr4_123318697_+SINEAluFLAM_A
CAediting_382316chr4_123318699_+SINEAluFLAM_A
CAediting_382317chr4_123318711_+SINEAluFLAM_A
CAediting_382318chr4_123318715_+SINEAluFLAM_A
CAediting_382319chr4_123318725_+SINEAluFLAM_A
CAediting_382320chr4_123318754_+SINEAluFLAM_A

Top

RNA A-to-I editing events in the alternative splicing sites for SPATA5

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000145375.7.SPATA5.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000145375.7.SPATA5.

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for SPATA5

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.
KIRC.CAediting_382268.ENSG00000145375.SPATA5.png
Soverview

Top

Protein coding region RNA A-to-I editings for SPATA5

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


Top

The effects of the RNA editing to the miRNA binding sites for SPATA5

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for SPATA5

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.
ENST00000274008.4protein_codingSoverviewSoverview

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI
CAediting_382216ENST00000274008.4chr4_123314787_+-2616.90-2612.90-2726.00
CAediting_382217ENST00000274008.4chr4_123314800_+-2618.50-2612.90-2726.00
CAediting_382218ENST00000274008.4chr4_123314817_+-2613.80-2612.90-2726.00
CAediting_382219ENST00000274008.4chr4_123314850_+-2612.00-2612.90-2726.00
CAediting_382220ENST00000274008.4chr4_123314855_+-2612.60-2612.90-2726.00
CAediting_382221ENST00000274008.4chr4_123314856_+-2612.60-2612.90-2726.00
CAediting_382222ENST00000274008.4chr4_123314859_+-2618.90-2612.90-2726.00
CAediting_382223ENST00000274008.4chr4_123314860_+-2613.10-2612.90-2726.00
CAediting_382224ENST00000274008.4chr4_123314885_+-2612.60-2612.90-2726.00
CAediting_382225ENST00000274008.4chr4_123314895_+-2612.90-2612.90-2726.00
CAediting_382226ENST00000274008.4chr4_123314897_+-2613.30-2612.90-2726.00
CAediting_382227ENST00000274008.4chr4_123314913_+-2616.70-2612.90-2726.00
CAediting_382228ENST00000274008.4chr4_123314921_+-2612.90-2612.90-2726.00
CAediting_382229ENST00000274008.4chr4_123314928_+-2610.50-2612.90-2726.00
CAediting_382230ENST00000274008.4chr4_123314936_+-2614.00-2612.90-2726.00
CAediting_382231ENST00000274008.4chr4_123314946_+-2613.10-2612.90-2726.00
CAediting_382232ENST00000274008.4chr4_123314956_+-2612.90-2612.90-2726.00
CAediting_382233ENST00000274008.4chr4_123314978_+-2613.20-2612.90-2726.00
CAediting_382234ENST00000274008.4chr4_123314999_+-2612.90-2612.90-2726.00
CAediting_382235ENST00000274008.4chr4_123315003_+-2612.50-2612.90-2726.00
CAediting_382236ENST00000274008.4chr4_123315008_+-2614.20-2612.90-2726.00
CAediting_382237ENST00000274008.4chr4_123315017_+-2616.00-2612.90-2726.00
CAediting_382238ENST00000274008.4chr4_123315018_+-2616.30-2612.90-2726.00
CAediting_382239ENST00000274008.4chr4_123315030_+-2612.50-2612.90-2726.00
CAediting_382240ENST00000274008.4chr4_123315204_+-2619.10-2612.90-2726.00
CAediting_382241ENST00000274008.4chr4_123315232_+-2619.50-2612.90-2726.00
CAediting_382242ENST00000274008.4chr4_123315252_+-2615.50-2612.90-2726.00
CAediting_382243ENST00000274008.4chr4_123315264_+-2612.60-2612.90-2726.00
CAediting_382244ENST00000274008.4chr4_123315292_+-2612.50-2612.90-2726.00
CAediting_382245ENST00000274008.4chr4_123315317_+-2612.50-2612.90-2726.00
CAediting_382246ENST00000274008.4chr4_123315327_+-2612.90-2612.90-2726.00
CAediting_382247ENST00000274008.4chr4_123315433_+-2612.30-2612.90-2726.00
CAediting_382248ENST00000274008.4chr4_123315454_+-2612.60-2612.90-2726.00
CAediting_382249ENST00000274008.4chr4_123315455_+-2613.00-2612.90-2726.00
CAediting_382250ENST00000274008.4chr4_123315456_+-2612.60-2612.90-2726.00
CAediting_382251ENST00000274008.4chr4_123315468_+-2612.90-2612.90-2726.00
CAediting_382252ENST00000274008.4chr4_123315474_+-2612.50-2612.90-2726.00
CAediting_382253ENST00000274008.4chr4_123315795_+-2613.90-2612.90-2726.00
CAediting_382254ENST00000274008.4chr4_123315801_+-2616.90-2612.90-2726.00
CAediting_382255ENST00000274008.4chr4_123315828_+-2616.00-2612.90-2726.00
CAediting_382256ENST00000274008.4chr4_123315829_+-2616.20-2612.90-2726.00
CAediting_382257ENST00000274008.4chr4_123315839_+-2612.50-2612.90-2726.00
CAediting_382258ENST00000274008.4chr4_123315841_+-2612.90-2612.90-2726.00
CAediting_382259ENST00000274008.4chr4_123315847_+-2614.10-2612.90-2726.00
CAediting_382260ENST00000274008.4chr4_123315852_+-2612.50-2612.90-2726.00
CAediting_382261ENST00000274008.4chr4_123315864_+-2615.80-2612.90-2726.00
CAediting_382262ENST00000274008.4chr4_123315865_+-2613.30-2612.90-2726.00
CAediting_382263ENST00000274008.4chr4_123315878_+-2613.80-2612.90-2726.00
CAediting_382264ENST00000274008.4chr4_123315883_+-2613.80-2612.90-2726.00
CAediting_382265ENST00000274008.4chr4_123315892_+-2613.20-2612.90-2726.00
CAediting_382266ENST00000274008.4chr4_123315896_+-2612.20-2612.90-2726.00
CAediting_382267ENST00000274008.4chr4_123315908_+-2613.00-2612.90-2726.00
CAediting_382268ENST00000274008.4chr4_123315912_+-2612.60-2612.90-2726.00
CAediting_382269ENST00000274008.4chr4_123315915_+-2613.50-2612.90-2726.00
CAediting_382270ENST00000274008.4chr4_123315917_+-2615.60-2612.90-2726.00
CAediting_382271ENST00000274008.4chr4_123315918_+-2615.20-2612.90-2726.00
CAediting_382272ENST00000274008.4chr4_123315920_+-2612.90-2612.90-2726.00
CAediting_382273ENST00000274008.4chr4_123315969_+-2612.90-2612.90-2726.00
CAediting_382274ENST00000274008.4chr4_123315971_+-2615.90-2612.90-2726.00
CAediting_382275ENST00000274008.4chr4_123316032_+-2612.20-2612.90-2726.00
CAediting_382276ENST00000274008.4chr4_123316040_+-2612.90-2612.90-2726.00
CAediting_382277ENST00000274008.4chr4_123316041_+-2612.90-2612.90-2726.00
CAediting_382278ENST00000274008.4chr4_123316042_+-2615.00-2612.90-2726.00
CAediting_382279ENST00000274008.4chr4_123316049_+-2613.70-2612.90-2726.00
CAediting_382280ENST00000274008.4chr4_123316054_+-2616.90-2612.90-2726.00
CAediting_382281ENST00000274008.4chr4_123316056_+-2613.80-2612.90-2726.00
CAediting_382282ENST00000274008.4chr4_123316063_+-2618.60-2612.90-2726.00
CAediting_382283ENST00000274008.4chr4_123316970_+-2613.00-2612.90-2726.00
CAediting_382284ENST00000274008.4chr4_123316971_+-2612.90-2612.90-2726.00
CAediting_382285ENST00000274008.4chr4_123316976_+-2612.20-2612.90-2726.00
CAediting_382286ENST00000274008.4chr4_123316997_+-2619.10-2612.90-2726.00
CAediting_382287ENST00000274008.4chr4_123317016_+-2619.80-2612.90-2726.00
CAediting_382288ENST00000274008.4chr4_123317017_+-2612.90-2612.90-2726.00
CAediting_382289ENST00000274008.4chr4_123317022_+-2618.90-2612.90-2726.00
CAediting_382290ENST00000274008.4chr4_123317023_+-2612.80-2612.90-2726.00
CAediting_382291ENST00000274008.4chr4_123317037_+-2613.00-2612.90-2726.00
CAediting_382292ENST00000274008.4chr4_123317038_+-2612.90-2612.90-2726.00
CAediting_382293ENST00000274008.4chr4_123317042_+-2619.10-2612.90-2726.00
CAediting_382294ENST00000274008.4chr4_123317047_+-2613.00-2612.90-2726.00
CAediting_382295ENST00000274008.4chr4_123317078_+-2612.60-2612.90-2726.00
CAediting_382296ENST00000274008.4chr4_123317104_+-2612.60-2612.90-2726.00
CAediting_382297ENST00000274008.4chr4_123317110_+-2612.20-2612.90-2726.00
CAediting_382298ENST00000274008.4chr4_123317114_+-2612.90-2612.90-2726.00
CAediting_382299ENST00000274008.4chr4_123317121_+-2612.00-2612.90-2726.00
CAediting_382300ENST00000274008.4chr4_123317145_+-2613.30-2612.90-2726.00
CAediting_382301ENST00000274008.4chr4_123317146_+-2613.80-2612.90-2726.00
CAediting_382302ENST00000274008.4chr4_123317166_+-2612.20-2612.90-2726.00
CAediting_382303ENST00000274008.4chr4_123317170_+-2612.00-2612.90-2726.00
CAediting_382304ENST00000274008.4chr4_123317175_+-2612.90-2612.90-2726.00
CAediting_382305ENST00000274008.4chr4_123317177_+-2612.30-2612.90-2726.00
CAediting_382306ENST00000274008.4chr4_123317195_+-2612.90-2612.90-2726.00
CAediting_382307ENST00000274008.4chr4_123317213_+-2612.00-2612.90-2726.00
CAediting_382308ENST00000274008.4chr4_123318656_+-2617.70-2612.90-2726.00
CAediting_382309ENST00000274008.4chr4_123318658_+-2612.50-2612.90-2726.00
CAediting_382310ENST00000274008.4chr4_123318660_+-2612.50-2612.90-2726.00
CAediting_382311ENST00000274008.4chr4_123318663_+-2613.30-2612.90-2726.00
CAediting_382312ENST00000274008.4chr4_123318666_+-2612.60-2612.90-2726.00
CAediting_382313ENST00000274008.4chr4_123318672_+-2612.20-2612.90-2726.00
CAediting_382314ENST00000274008.4chr4_123318692_+-2612.00-2612.90-2726.00
CAediting_382315ENST00000274008.4chr4_123318697_+-2619.50-2612.90-2726.00
CAediting_382316ENST00000274008.4chr4_123318699_+-2612.80-2612.90-2726.00
CAediting_382317ENST00000274008.4chr4_123318711_+-2612.90-2612.90-2726.00
CAediting_382318ENST00000274008.4chr4_123318715_+-2612.20-2612.90-2726.00
CAediting_382319ENST00000274008.4chr4_123318725_+-2614.80-2612.90-2726.00
CAediting_382320ENST00000274008.4chr4_123318754_+-2617.50-2612.90-2726.00

Top

Relation with ADAR for SPATA5

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
STADCAediting_382256chr4_123315829_+....0.0147170488884880.215181749918478
BRCACAediting_382268chr4_123315912_+0.0003047193950095470.201226221052426....
STADCAediting_382268chr4_123315912_+..0.03996588800343510.139887634889419..
STADCAediting_382271chr4_123315918_+..0.03354491908291330.237958297535353..
BRCACAediting_382273chr4_123315969_+0.01555449552496530.182124375057243....
STADCAediting_382273chr4_123315969_+..0.01311746687240630.198223473215..
SKCMCAediting_382273chr4_123315969_+0.02308416476987110.238030548886261....
STADCAediting_382308chr4_123318656_+..0.01282434594163160.240998756713025..
LUSCCAediting_382314chr4_123318692_+0.04209595662773050.236939248200933....
HNSCCAediting_382314chr4_123318692_+0.02322709842297890.28345041053563....

Top

Relation with cancer stages for SPATA5

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.
BRCApathologic_stageCAediting_382268chr4_123315912_+0.004428516649630820.160458569172419
BRCApathologic_stageCAediting_382272chr4_123315920_+0.002737761707353240.187963724154314
HNSCpathologic_stageCAediting_382273chr4_123315969_+0.0202007912691470.361543529847454
HNSCpathologic_stageCAediting_382308chr4_123318656_+0.009753783818229030.325844260907775
SKCMpathologic_stageCAediting_382275chr4_123316032_+0.01352518575445840.354158959772503

Top

Relation with survival for SPATA5

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR
SKCMCAediting_382267chr4_123315908_+0.0275815860684020.030918532.6259

Top

RelatedDrugs for SPATA5

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

Top

RelatedDiseases for SPATA5

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource
SPATA5C4225276EPILEPSY, HEARING LOSS, AND MENTAL RETARDATION SYNDROME3CTD_human;GENOMICS_ENGLAND;ORPHANET;UNIPROT
SPATA5C0036341Schizophrenia1CTD_human