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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: ZNF780B (CAeditome ID:163131)

Gene summary for ZNF780B

check button Gene summary
Gene informationGene symbol

ZNF780B

Gene ID

163131

Gene namezinc finger protein 780B
SynonymsZNF779
Cytomap

19q13.2

Type of geneprotein-coding
Descriptionzinc finger protein 780Bzinc finger protein 779
Modification date20210518
UniProtAcc

Q9Y6R6

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID

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RNA A-to-I events for ZNF780B

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000128000.14
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_1351322(40029999, -), CAediting_1351323(40030030, -), CAediting_1351324(40030031, -), CAediting_1351325(40030042, -), CAediting_1351326(40030043, -), CAediting_1351327(40030044, -), CAediting_1351328(40030052, -), CAediting_1351329(40030054, -), CAediting_1351330(40030069, -), CAediting_1351331(40031213, -), CAediting_1351332(40031251, -), CAediting_1351333(40031255, -), CAediting_1351334(40031256, -), CAediting_1351335(40031257, -), CAediting_1351336(40031259, -), CAediting_1351337(40031269, -), CAediting_1351338(40031274, -), CAediting_1351339(40031279, -), CAediting_1351340(40031289, -), CAediting_1351341(40031290, -), CAediting_1351342(40031294, -), CAediting_1351343(40031298, -), CAediting_1351344(40031305, -), CAediting_1351345(40031311, -), CAediting_1351346(40031312, -), CAediting_1351347(40031319, -), CAediting_1351348(40031324, -), CAediting_1351349(40031333, -), CAediting_1351350(40031343, -), CAediting_1351351(40031350, -), CAediting_1351352(40031354, -), CAediting_1351353(40031359, -), CAediting_1351354(40031360, -), CAediting_1351355(40031368, -), CAediting_1351356(40031386, -), CAediting_1351357(40031389, -), CAediting_1351358(40031390, -), CAediting_1351359(40031391, -), CAediting_1351360(40031392, -), CAediting_1351361(40031393, -), CAediting_1351362(40031394, -), CAediting_1351363(40031395, -), CAediting_1351364(40031397, -), CAediting_1351365(40031398, -), CAediting_1351366(40031399, -), CAediting_1351367(40031400, -), CAediting_1351368(40031401, -), CAediting_1351369(40031410, -), CAediting_1351370(40031415, -), CAediting_1351371(40031416, -), CAediting_1351372(40031417, -), CAediting_1351373(40031418, -), CAediting_1351374(40031423, -), CAediting_1351375(40031425, -), CAediting_1351376(40031426, -), CAediting_1351377(40031434, -), CAediting_1351378(40031435, -), CAediting_1351379(40031438, -), CAediting_1351380(40031440, -), CAediting_1351381(40031446, -), CAediting_1351382(40031449, -), CAediting_1351383(40031454, -), CAediting_1351384(40031464, -), CAediting_1351385(40031472, -), CAediting_1351386(40031473, -), CAediting_1351387(40031478, -), CAediting_1351388(40031486, -), CAediting_1351389(40031489, -), CAediting_1351390(40031494, -), CAediting_1351391(40031495, -), CAediting_1351392(40031503, -), CAediting_1351393(40031512, -), CAediting_1351394(40031522, -), CAediting_1351395(40032453, -), CAediting_1351396(40032462, -), CAediting_1351397(40032475, -), CAediting_1351398(40032476, -), CAediting_1351399(40032493, -), CAediting_1351400(40032525, -), CAediting_1351401(40032529, -), CAediting_1351402(40032537, -), CAediting_1351403(40032545, -), CAediting_1351404(40032554, -), CAediting_1351405(40032560, -), CAediting_1351406(40032570, -), CAediting_1351407(40032574, -), CAediting_1351408(40032594, -), CAediting_1351409(40032596, -), CAediting_1351410(40032599, -), CAediting_1351411(40032606, -), CAediting_1351412(40032618, -), CAediting_1351413(40032631, -), CAediting_1351414(40032636, -), CAediting_1351415(40032655, -), CAediting_1351416(40032661, -), CAediting_1351417(40032671, -), CAediting_1351418(40032680, -), CAediting_1351419(40032685, -), CAediting_1351420(40032692, -), CAediting_1351421(40033539, -), CAediting_1351422(40033544, -), CAediting_1351423(40033629, -), CAediting_1351424(40033630, -), CAediting_1351425(40034037, -), CAediting_1351426(40034091, -), CAediting_1351427(40034099, -), CAediting_1351428(40034544, -), CAediting_1351429(40034593, -), CAediting_1351430(40034748, -), CAediting_1351431(40034793, -), CAediting_1351432(40035083, -), CAediting_1351433(40035096, -), CAediting_1351434(40035957, -), CAediting_1351435(40035982, -), CAediting_1351436(40035988, -), CAediting_1351437(40036007, -), CAediting_1351438(40036009, -), CAediting_1351439(40036020, -), CAediting_1351440(40036234, -), CAediting_1351441(40036259, -), CAediting_1351442(40036278, -), CAediting_1351443(40036279, -), CAediting_1351444(40036297, -), CAediting_1351445(40036308, -), CAediting_1351446(40036318, -), CAediting_1351447(40036936, -), CAediting_1351448(40036994, -), CAediting_1351449(40037030, -), CAediting_1351450(40037047, -), CAediting_1351451(40037052, -), CAediting_1351452(40037053, -), CAediting_1351453(40037079, -), CAediting_1351454(40037083, -), CAediting_1351455(40037084, -), CAediting_1351456(40037088, -), CAediting_1351457(40037092, -), CAediting_1351458(40037093, -), CAediting_1351459(40037094, -), CAediting_1351460(40037108, -), CAediting_1351461(40037118, -), CAediting_1351462(40037119, -), CAediting_1351463(40037194, -), CAediting_1351464(40037248, -), CAediting_1351465(40037256, -), CAediting_1351466(40037258, -), CAediting_1351467(40037359, -), CAediting_1351468(40037375, -), CAediting_1351469(40037379, -), CAediting_1351470(40037388, -), CAediting_1351471(40037406, -), CAediting_1351472(40037427, -), CAediting_1351473(40037494, -), CAediting_1351474(40037495, -), CAediting_1351475(40037522, -), CAediting_1351476(40037526, -), CAediting_1351477(40037527, -), CAediting_1351478(40037530, -), CAediting_1351479(40045361, -), CAediting_1351480(40045381, -), CAediting_1351481(40045382, -), CAediting_1351482(40045415, -), CAediting_1351483(40045416, -), CAediting_1351484(40045418, -), CAediting_1351485(40045427, -), CAediting_1351486(40045439, -), CAediting_1351487(40045444, -), CAediting_1351488(40045463, -), CAediting_1351489(40045473, -), CAediting_1351490(40045527, -), CAediting_1351491(40045538, -), CAediting_1351492(40045539, -), CAediting_1351493(40045541, -), CAediting_1351494(40045548, -), CAediting_1351495(40045570, -), CAediting_1351496(40045610, -), CAediting_1351497(40045620, -), CAediting_1351498(40045625, -), CAediting_1351499(40045628, -), CAediting_1351500(40045743, -), CAediting_1351501(40045776, -), CAediting_1351502(40045784, -), CAediting_1351503(40045816, -), CAediting_1351504(40045822, -), CAediting_1351505(40045824, -), CAediting_1351506(40045902, -), CAediting_1351507(40046980, -), CAediting_1351508(40046982, -), CAediting_1351509(40046992, -), CAediting_1351510(40046995, -), CAediting_1351511(40047021, -), CAediting_1351512(40047073, -), CAediting_1351513(40047074, -), CAediting_1351514(40047372, -), CAediting_1351515(40047433, -), CAediting_1351516(40047436, -), CAediting_1351517(40047441, -),

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RNA editing positional annotations for ZNF780B using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred
CAediting_1351430chr19_40034748_-nonsynonymous SNVENST00000221355.9c.A1667Gp.K556RDPN
CAediting_1351430chr19_40034748_-nonsynonymous SNVENST00000434248.4c.A2111Gp.K704RDPN
CAediting_1351433chr19_40035096_-nonsynonymous SNVENST00000221355.9c.A1319Gp.K440RDPN
CAediting_1351433chr19_40035096_-nonsynonymous SNVENST00000434248.4c.A1763Gp.K588RDPN
CAediting_1351434chr19_40035957_-nonsynonymous SNVENST00000221355.9c.A458Gp.N153SDBN
CAediting_1351434chr19_40035957_-nonsynonymous SNVENST00000434248.4c.A902Gp.N301SDBN
CAediting_1351438chr19_40036009_-nonsynonymous SNVENST00000221355.9c.A406Gp.K136EDDD
CAediting_1351438chr19_40036009_-nonsynonymous SNVENST00000434248.4c.A850Gp.K284EDDD
CAediting_1351439chr19_40036020_-nonsynonymous SNVENST00000221355.9c.A395Gp.K132RDDN
CAediting_1351439chr19_40036020_-nonsynonymous SNVENST00000434248.4c.A839Gp.K280RDDN
CAediting_1351442chr19_40036278_-nonsynonymous SNVENST00000221355.9c.A137Gp.K46RDBN
CAediting_1351442chr19_40036278_-nonsynonymous SNVENST00000434248.4c.A581Gp.K194RDBN
CAediting_1351444chr19_40036297_-nonsynonymous SNVENST00000221355.9c.A118Gp.T40ADDD
CAediting_1351444chr19_40036297_-nonsynonymous SNVENST00000434248.4c.A562Gp.T188ADDD
CAediting_1351445chr19_40036308_-nonsynonymous SNVENST00000221355.9c.A107Gp.Q36RDPD
CAediting_1351445chr19_40036308_-nonsynonymous SNVENST00000434248.4c.A551Gp.Q184RDPD

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_1351322chr19_40029999_-UTR3
CAediting_1351323chr19_40030030_-UTR3
CAediting_1351324chr19_40030031_-UTR3
CAediting_1351325chr19_40030042_-UTR3
CAediting_1351326chr19_40030043_-UTR3
CAediting_1351327chr19_40030044_-UTR3
CAediting_1351328chr19_40030052_-UTR3
CAediting_1351329chr19_40030054_-UTR3
CAediting_1351330chr19_40030069_-UTR3
CAediting_1351331chr19_40031213_-UTR3
CAediting_1351332chr19_40031251_-UTR3
CAediting_1351333chr19_40031255_-UTR3
CAediting_1351334chr19_40031256_-UTR3
CAediting_1351335chr19_40031257_-UTR3
CAediting_1351336chr19_40031259_-UTR3
CAediting_1351337chr19_40031269_-UTR3
CAediting_1351338chr19_40031274_-UTR3
CAediting_1351339chr19_40031279_-UTR3
CAediting_1351340chr19_40031289_-UTR3
CAediting_1351341chr19_40031290_-UTR3
CAediting_1351342chr19_40031294_-UTR3
CAediting_1351343chr19_40031298_-UTR3
CAediting_1351344chr19_40031305_-UTR3
CAediting_1351345chr19_40031311_-UTR3
CAediting_1351346chr19_40031312_-UTR3
CAediting_1351347chr19_40031319_-UTR3
CAediting_1351348chr19_40031324_-UTR3
CAediting_1351349chr19_40031333_-UTR3
CAediting_1351350chr19_40031343_-UTR3
CAediting_1351351chr19_40031350_-UTR3
CAediting_1351352chr19_40031354_-UTR3
CAediting_1351353chr19_40031359_-UTR3
CAediting_1351354chr19_40031360_-UTR3
CAediting_1351355chr19_40031368_-UTR3
CAediting_1351356chr19_40031386_-UTR3
CAediting_1351357chr19_40031389_-UTR3
CAediting_1351358chr19_40031390_-UTR3
CAediting_1351359chr19_40031391_-UTR3
CAediting_1351360chr19_40031392_-UTR3
CAediting_1351361chr19_40031393_-UTR3
CAediting_1351362chr19_40031394_-UTR3
CAediting_1351363chr19_40031395_-UTR3
CAediting_1351364chr19_40031397_-UTR3
CAediting_1351365chr19_40031398_-UTR3
CAediting_1351366chr19_40031399_-UTR3
CAediting_1351367chr19_40031400_-UTR3
CAediting_1351368chr19_40031401_-UTR3
CAediting_1351369chr19_40031410_-UTR3
CAediting_1351370chr19_40031415_-UTR3
CAediting_1351371chr19_40031416_-UTR3
CAediting_1351372chr19_40031417_-UTR3
CAediting_1351373chr19_40031418_-UTR3
CAediting_1351374chr19_40031423_-UTR3
CAediting_1351375chr19_40031425_-UTR3
CAediting_1351376chr19_40031426_-UTR3
CAediting_1351377chr19_40031434_-UTR3
CAediting_1351378chr19_40031435_-UTR3
CAediting_1351379chr19_40031438_-UTR3
CAediting_1351380chr19_40031440_-UTR3
CAediting_1351381chr19_40031446_-UTR3
CAediting_1351382chr19_40031449_-UTR3
CAediting_1351383chr19_40031454_-UTR3
CAediting_1351384chr19_40031464_-UTR3
CAediting_1351385chr19_40031472_-UTR3
CAediting_1351386chr19_40031473_-UTR3
CAediting_1351387chr19_40031478_-UTR3
CAediting_1351388chr19_40031486_-UTR3
CAediting_1351389chr19_40031489_-UTR3
CAediting_1351390chr19_40031494_-UTR3
CAediting_1351391chr19_40031495_-UTR3
CAediting_1351392chr19_40031503_-UTR3
CAediting_1351393chr19_40031512_-UTR3
CAediting_1351394chr19_40031522_-UTR3
CAediting_1351395chr19_40032453_-UTR3
CAediting_1351396chr19_40032462_-UTR3
CAediting_1351397chr19_40032475_-UTR3
CAediting_1351398chr19_40032476_-UTR3
CAediting_1351399chr19_40032493_-UTR3
CAediting_1351400chr19_40032525_-UTR3
CAediting_1351401chr19_40032529_-UTR3
CAediting_1351402chr19_40032537_-UTR3
CAediting_1351403chr19_40032545_-UTR3
CAediting_1351404chr19_40032554_-UTR3
CAediting_1351405chr19_40032560_-UTR3
CAediting_1351406chr19_40032570_-UTR3
CAediting_1351407chr19_40032574_-UTR3
CAediting_1351408chr19_40032594_-UTR3
CAediting_1351409chr19_40032596_-UTR3
CAediting_1351410chr19_40032599_-UTR3
CAediting_1351411chr19_40032606_-UTR3
CAediting_1351412chr19_40032618_-UTR3
CAediting_1351413chr19_40032631_-UTR3
CAediting_1351414chr19_40032636_-UTR3
CAediting_1351415chr19_40032655_-UTR3
CAediting_1351416chr19_40032661_-UTR3
CAediting_1351417chr19_40032671_-UTR3
CAediting_1351418chr19_40032680_-UTR3
CAediting_1351419chr19_40032685_-UTR3
CAediting_1351420chr19_40032692_-UTR3
CAediting_1351421chr19_40033539_-UTR3
CAediting_1351422chr19_40033544_-UTR3
CAediting_1351423chr19_40033629_-UTR3
CAediting_1351424chr19_40033630_-UTR3
CAediting_1351425chr19_40034037_-UTR3
CAediting_1351426chr19_40034091_-UTR3
CAediting_1351427chr19_40034099_-UTR3
CAediting_1351428chr19_40034544_-exonic
CAediting_1351429chr19_40034593_-exonic
CAediting_1351430chr19_40034748_-exonic
CAediting_1351431chr19_40034793_-exonic
CAediting_1351432chr19_40035083_-exonic
CAediting_1351433chr19_40035096_-exonic
CAediting_1351434chr19_40035957_-exonic
CAediting_1351435chr19_40035982_-exonic
CAediting_1351436chr19_40035988_-exonic
CAediting_1351437chr19_40036007_-exonic
CAediting_1351438chr19_40036009_-exonic
CAediting_1351439chr19_40036020_-exonic
CAediting_1351440chr19_40036234_-exonic
CAediting_1351441chr19_40036259_-exonic
CAediting_1351442chr19_40036278_-exonic
CAediting_1351443chr19_40036279_-exonic
CAediting_1351444chr19_40036297_-exonic
CAediting_1351445chr19_40036308_-exonic
CAediting_1351446chr19_40036318_-exonic
CAediting_1351447chr19_40036936_-intronic
CAediting_1351448chr19_40036994_-intronic
CAediting_1351449chr19_40037030_-intronic
CAediting_1351450chr19_40037047_-intronic
CAediting_1351451chr19_40037052_-intronic
CAediting_1351452chr19_40037053_-intronic
CAediting_1351453chr19_40037079_-intronic
CAediting_1351454chr19_40037083_-intronic
CAediting_1351455chr19_40037084_-intronic
CAediting_1351456chr19_40037088_-intronic
CAediting_1351457chr19_40037092_-intronic
CAediting_1351458chr19_40037093_-intronic
CAediting_1351459chr19_40037094_-intronic
CAediting_1351460chr19_40037108_-intronic
CAediting_1351461chr19_40037118_-intronic
CAediting_1351462chr19_40037119_-intronic
CAediting_1351463chr19_40037194_-intronic
CAediting_1351464chr19_40037248_-intronic
CAediting_1351465chr19_40037256_-intronic
CAediting_1351466chr19_40037258_-intronic
CAediting_1351467chr19_40037359_-intronic
CAediting_1351468chr19_40037375_-intronic
CAediting_1351469chr19_40037379_-intronic
CAediting_1351470chr19_40037388_-intronic
CAediting_1351471chr19_40037406_-intronic
CAediting_1351472chr19_40037427_-intronic
CAediting_1351473chr19_40037494_-intronic
CAediting_1351474chr19_40037495_-intronic
CAediting_1351475chr19_40037522_-intronic
CAediting_1351476chr19_40037526_-intronic
CAediting_1351477chr19_40037527_-intronic
CAediting_1351478chr19_40037530_-intronic
CAediting_1351479chr19_40045361_-intronic
CAediting_1351480chr19_40045381_-intronic
CAediting_1351481chr19_40045382_-intronic
CAediting_1351482chr19_40045415_-intronic
CAediting_1351483chr19_40045416_-intronic
CAediting_1351484chr19_40045418_-intronic
CAediting_1351485chr19_40045427_-intronic
CAediting_1351486chr19_40045439_-intronic
CAediting_1351487chr19_40045444_-intronic
CAediting_1351488chr19_40045463_-intronic
CAediting_1351489chr19_40045473_-intronic
CAediting_1351490chr19_40045527_-intronic
CAediting_1351491chr19_40045538_-intronic
CAediting_1351492chr19_40045539_-intronic
CAediting_1351493chr19_40045541_-intronic
CAediting_1351494chr19_40045548_-intronic
CAediting_1351495chr19_40045570_-intronic
CAediting_1351496chr19_40045610_-intronic
CAediting_1351497chr19_40045620_-intronic
CAediting_1351498chr19_40045625_-intronic
CAediting_1351499chr19_40045628_-intronic
CAediting_1351500chr19_40045743_-intronic
CAediting_1351501chr19_40045776_-intronic
CAediting_1351502chr19_40045784_-intronic
CAediting_1351503chr19_40045816_-intronic
CAediting_1351504chr19_40045822_-intronic
CAediting_1351505chr19_40045824_-intronic
CAediting_1351506chr19_40045902_-intronic
CAediting_1351507chr19_40046980_-intronic
CAediting_1351508chr19_40046982_-intronic
CAediting_1351509chr19_40046992_-intronic
CAediting_1351510chr19_40046995_-intronic
CAediting_1351511chr19_40047021_-intronic
CAediting_1351512chr19_40047073_-intronic
CAediting_1351513chr19_40047074_-intronic
CAediting_1351514chr19_40047372_-ncRNA_exonic
CAediting_1351515chr19_40047433_-exonic
CAediting_1351516chr19_40047436_-exonic
CAediting_1351517chr19_40047441_-exonic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_1351322chr19_40029999_-DNATcMar-TiggerTigger5b
CAediting_1351323chr19_40030030_-DNATcMar-TiggerTigger5b
CAediting_1351324chr19_40030031_-DNATcMar-TiggerTigger5b
CAediting_1351325chr19_40030042_-DNATcMar-TiggerTigger5b
CAediting_1351326chr19_40030043_-DNATcMar-TiggerTigger5b
CAediting_1351327chr19_40030044_-DNATcMar-TiggerTigger5b
CAediting_1351328chr19_40030052_-DNATcMar-TiggerTigger5b
CAediting_1351329chr19_40030054_-DNATcMar-TiggerTigger5b
CAediting_1351330chr19_40030069_-DNATcMar-TiggerTigger5b
CAediting_1351332chr19_40031251_-SINEAluAluSx
CAediting_1351333chr19_40031255_-SINEAluAluSx
CAediting_1351334chr19_40031256_-SINEAluAluSx
CAediting_1351335chr19_40031257_-SINEAluAluSx
CAediting_1351336chr19_40031259_-SINEAluAluSx
CAediting_1351337chr19_40031269_-SINEAluAluSx
CAediting_1351338chr19_40031274_-SINEAluAluSx
CAediting_1351339chr19_40031279_-SINEAluAluSx
CAediting_1351340chr19_40031289_-SINEAluAluSx
CAediting_1351341chr19_40031290_-SINEAluAluSx
CAediting_1351342chr19_40031294_-SINEAluAluSx
CAediting_1351343chr19_40031298_-SINEAluAluSx
CAediting_1351344chr19_40031305_-SINEAluAluSx
CAediting_1351345chr19_40031311_-SINEAluAluSx
CAediting_1351346chr19_40031312_-SINEAluAluSx
CAediting_1351347chr19_40031319_-SINEAluAluSx
CAediting_1351348chr19_40031324_-SINEAluAluSx
CAediting_1351349chr19_40031333_-SINEAluAluSx
CAediting_1351350chr19_40031343_-SINEAluAluSx
CAediting_1351351chr19_40031350_-SINEAluAluSx
CAediting_1351352chr19_40031354_-SINEAluAluSx
CAediting_1351353chr19_40031359_-SINEAluAluSx
CAediting_1351354chr19_40031360_-SINEAluAluSx
CAediting_1351355chr19_40031368_-SINEAluAluSx
CAediting_1351356chr19_40031386_-SINEAluAluSx
CAediting_1351357chr19_40031389_-SINEAluAluSx
CAediting_1351358chr19_40031390_-SINEAluAluSx
CAediting_1351359chr19_40031391_-SINEAluAluSx
CAediting_1351360chr19_40031392_-SINEAluAluSx
CAediting_1351361chr19_40031393_-SINEAluAluSx
CAediting_1351362chr19_40031394_-SINEAluAluSx
CAediting_1351363chr19_40031395_-SINEAluAluSx
CAediting_1351364chr19_40031397_-SINEAluAluSx
CAediting_1351365chr19_40031398_-SINEAluAluSx
CAediting_1351366chr19_40031399_-SINEAluAluSx
CAediting_1351367chr19_40031400_-SINEAluAluSx
CAediting_1351368chr19_40031401_-SINEAluAluSx
CAediting_1351369chr19_40031410_-SINEAluAluSx
CAediting_1351370chr19_40031415_-SINEAluAluSx
CAediting_1351371chr19_40031416_-SINEAluAluSx
CAediting_1351372chr19_40031417_-SINEAluAluSx
CAediting_1351373chr19_40031418_-SINEAluAluSx
CAediting_1351374chr19_40031423_-SINEAluAluSx
CAediting_1351375chr19_40031425_-SINEAluAluSx
CAediting_1351376chr19_40031426_-SINEAluAluSx
CAediting_1351377chr19_40031434_-SINEAluAluSx
CAediting_1351378chr19_40031435_-SINEAluAluSx
CAediting_1351379chr19_40031438_-SINEAluAluSx
CAediting_1351380chr19_40031440_-SINEAluAluSx
CAediting_1351381chr19_40031446_-SINEAluAluSx
CAediting_1351382chr19_40031449_-SINEAluAluSx
CAediting_1351383chr19_40031454_-SINEAluAluSx
CAediting_1351384chr19_40031464_-SINEAluAluSx
CAediting_1351385chr19_40031472_-SINEAluAluSx
CAediting_1351386chr19_40031473_-SINEAluAluSx
CAediting_1351387chr19_40031478_-SINEAluAluSx
CAediting_1351388chr19_40031486_-SINEAluAluSx
CAediting_1351389chr19_40031489_-SINEAluAluSx
CAediting_1351390chr19_40031494_-SINEAluAluSx
CAediting_1351391chr19_40031495_-SINEAluAluSx
CAediting_1351392chr19_40031503_-SINEAluAluSx
CAediting_1351393chr19_40031512_-SINEAluAluSx
CAediting_1351395chr19_40032453_-SINEAluAluY
CAediting_1351396chr19_40032462_-SINEAluAluY
CAediting_1351397chr19_40032475_-SINEAluAluY
CAediting_1351398chr19_40032476_-SINEAluAluY
CAediting_1351399chr19_40032493_-SINEAluAluY
CAediting_1351400chr19_40032525_-SINEAluAluY
CAediting_1351401chr19_40032529_-SINEAluAluY
CAediting_1351402chr19_40032537_-SINEAluAluY
CAediting_1351403chr19_40032545_-SINEAluAluY
CAediting_1351404chr19_40032554_-SINEAluAluY
CAediting_1351405chr19_40032560_-SINEAluAluY
CAediting_1351406chr19_40032570_-SINEAluAluY
CAediting_1351407chr19_40032574_-SINEAluAluY
CAediting_1351408chr19_40032594_-SINEAluAluY
CAediting_1351409chr19_40032596_-SINEAluAluY
CAediting_1351410chr19_40032599_-SINEAluAluY
CAediting_1351411chr19_40032606_-SINEAluAluY
CAediting_1351412chr19_40032618_-SINEAluAluY
CAediting_1351413chr19_40032631_-SINEAluAluY
CAediting_1351414chr19_40032636_-SINEAluAluY
CAediting_1351415chr19_40032655_-SINEAluAluY
CAediting_1351416chr19_40032661_-SINEAluAluY
CAediting_1351417chr19_40032671_-SINEAluAluY
CAediting_1351418chr19_40032680_-SINEAluAluY
CAediting_1351419chr19_40032685_-SINEAluAluY
CAediting_1351420chr19_40032692_-SINEAluAluY
CAediting_1351447chr19_40036936_-SINEAluAluSq2
CAediting_1351448chr19_40036994_-SINEAluAluSq2
CAediting_1351449chr19_40037030_-SINEAluAluSq2
CAediting_1351450chr19_40037047_-SINEAluAluSq2
CAediting_1351451chr19_40037052_-SINEAluAluSq2
CAediting_1351452chr19_40037053_-SINEAluAluSq2
CAediting_1351453chr19_40037079_-SINEAluAluSq2
CAediting_1351454chr19_40037083_-SINEAluAluSq2
CAediting_1351455chr19_40037084_-SINEAluAluSq2
CAediting_1351456chr19_40037088_-SINEAluAluSq2
CAediting_1351457chr19_40037092_-SINEAluAluSq2
CAediting_1351458chr19_40037093_-SINEAluAluSq2
CAediting_1351459chr19_40037094_-SINEAluAluSq2
CAediting_1351460chr19_40037108_-SINEAluAluSq2
CAediting_1351461chr19_40037118_-SINEAluAluSq2
CAediting_1351462chr19_40037119_-SINEAluAluSq2
CAediting_1351463chr19_40037194_-SINEAluAluSq2
CAediting_1351464chr19_40037248_-SINEAluAluJr
CAediting_1351465chr19_40037256_-SINEAluAluJr
CAediting_1351466chr19_40037258_-SINEAluAluJr
CAediting_1351467chr19_40037359_-SINEAluAluJr
CAediting_1351468chr19_40037375_-SINEAluAluJr
CAediting_1351469chr19_40037379_-SINEAluAluJr
CAediting_1351470chr19_40037388_-SINEAluAluJr
CAediting_1351471chr19_40037406_-SINEAluAluJr
CAediting_1351472chr19_40037427_-SINEAluAluJr
CAediting_1351473chr19_40037494_-SINEAluAluJr
CAediting_1351474chr19_40037495_-SINEAluAluJr
CAediting_1351475chr19_40037522_-SINEAluAluJr
CAediting_1351476chr19_40037526_-SINEAluAluJr
CAediting_1351477chr19_40037527_-SINEAluAluJr
CAediting_1351478chr19_40037530_-SINEAluAluJr
CAediting_1351479chr19_40045361_-LINEL1L1MA4A
CAediting_1351480chr19_40045381_-LINEL1L1MA4A
CAediting_1351481chr19_40045382_-LINEL1L1MA4A
CAediting_1351482chr19_40045415_-LINEL1L1MA4A
CAediting_1351483chr19_40045416_-LINEL1L1MA4A
CAediting_1351484chr19_40045418_-LINEL1L1MA4A
CAediting_1351485chr19_40045427_-LINEL1L1MA4A
CAediting_1351486chr19_40045439_-LINEL1L1MA4A
CAediting_1351487chr19_40045444_-LINEL1L1MA4A
CAediting_1351488chr19_40045463_-LINEL1L1MA4A
CAediting_1351489chr19_40045473_-LINEL1L1MA4A
CAediting_1351490chr19_40045527_-LINEL1L1MA4A
CAediting_1351491chr19_40045538_-LINEL1L1MA4A
CAediting_1351492chr19_40045539_-LINEL1L1MA4A
CAediting_1351493chr19_40045541_-LINEL1L1MA4A
CAediting_1351494chr19_40045548_-LINEL1L1MA4A
CAediting_1351495chr19_40045570_-LINEL1L1MA4A
CAediting_1351496chr19_40045610_-LINEL1L1MA4A
CAediting_1351497chr19_40045620_-LINEL1L1MA4A
CAediting_1351498chr19_40045625_-LINEL1L1MA4A
CAediting_1351499chr19_40045628_-LINEL1L1MA4A
CAediting_1351500chr19_40045743_-SINEAluAluSq2
CAediting_1351501chr19_40045776_-SINEAluAluSq2
CAediting_1351502chr19_40045784_-SINEAluAluSq2
CAediting_1351503chr19_40045816_-SINEAluAluSq2
CAediting_1351504chr19_40045822_-SINEAluAluSq2
CAediting_1351505chr19_40045824_-SINEAluAluSq2
CAediting_1351506chr19_40045902_-SINEAluAluSq2
CAediting_1351507chr19_40046980_-SINEAluFLAM_A
CAediting_1351508chr19_40046982_-SINEAluFLAM_A
CAediting_1351509chr19_40046992_-SINEAluFLAM_A
CAediting_1351510chr19_40046995_-SINEAluFLAM_A
CAediting_1351511chr19_40047021_-SINEAluFLAM_A
CAediting_1351512chr19_40047073_-SINEAluFLAM_A
CAediting_1351513chr19_40047074_-SINEAluFLAM_A

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RNA A-to-I editing events in the alternative splicing sites for ZNF780B

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength
ESCAediting_1351514chr19_40047372_-40047368:400473765SS0+2iAGGTAAGTG-15.78AGGTGAGTG-15.24

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000128000.14.ZNF780B.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000128000.14.ZNF780B.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for ZNF780B

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.
PAAD.CAediting_1351340.ENSG00000128000.ZNF780B.png
Soverview
THYM.CAediting_1351340.ENSG00000128000.ZNF780B.png
Soverview
THYM.CAediting_1351353.ENSG00000128000.ZNF780B.png
Soverview
THYM.CAediting_1351369.ENSG00000128000.ZNF780B.png
Soverview
UCEC.CAediting_1351334.ENSG00000128000.ZNF780B.png
Soverview
UCEC.CAediting_1351340.ENSG00000128000.ZNF780B.png
Soverview

Top

Protein coding region RNA A-to-I editings for ZNF780B

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.
all structure


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The effects of the RNA editing to the miRNA binding sites for ZNF780B

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1351328chr19_40030052_-ENSG00000128000.14ENST00000434248hsa-miR-103b40030052400300587mer-m84003005140030073152.00-16.41
CAediting_1351328chr19_40030052_-ENSG00000128000.14ENST00000434248hsa-miR-103b40030052400300587mer-m84003005140030073152.00-16.41
CAediting_1351328chr19_40030052_-ENSG00000128000.14ENST00000434248hsa-miR-430540030046400300538mer-1a4003004640030065147.00-15.83
CAediting_1351333chr19_40031255_-ENSG00000128000.14ENST00000434248hsa-miR-365540031255400312617mer-m84003125440031272155.00-23.38
CAediting_1351334chr19_40031256_-ENSG00000128000.14ENST00000434248hsa-miR-3664-5p40031253400312597mer-m84003125240031274151.00-18.82
CAediting_1351334chr19_40031256_-ENSG00000128000.14ENST00000434248hsa-miR-6794-3p40031251400312577mer-m84003125040031267150.00-19.86
CAediting_1351335chr19_40031257_-ENSG00000128000.14ENST00000434248hsa-miR-118140031256400312638mer-1a4003125640031276142.00-17.32
CAediting_1351340chr19_40031289_-ENSG00000128000.14ENST00000434248hsa-miR-149-5p40031289400312957mer-m84003128840031310156.00-27.67
CAediting_1351341chr19_40031290_-ENSG00000128000.14ENST00000434248hsa-miR-4638-5p40031287400312948mer-1a4003128740031306144.00-19.42
CAediting_1351342chr19_40031294_-ENSG00000128000.14ENST00000434248hsa-miR-324-3p40031294400313007mer-m84003129340031315147.00-24.97
CAediting_1351343chr19_40031298_-ENSG00000128000.14ENST00000434248hsa-miR-6511a-3p40031293400312986mer4003129240031313144.00-25.88
CAediting_1351343chr19_40031298_-ENSG00000128000.14ENST00000434248hsa-miR-6511a-3p40031293400312986mer4003129240031313144.00-25.88
CAediting_1351343chr19_40031298_-ENSG00000128000.14ENST00000434248hsa-miR-6511a-3p40031293400312986mer4003129240031313144.00-25.88
CAediting_1351343chr19_40031298_-ENSG00000128000.14ENST00000434248hsa-miR-6511a-3p40031293400312986mer4003129240031313144.00-25.88
CAediting_1351343chr19_40031298_-ENSG00000128000.14ENST00000434248hsa-miR-6511b-3p40031293400312986mer4003129240031314148.00-28.18
CAediting_1351343chr19_40031298_-ENSG00000128000.14ENST00000434248hsa-miR-6511b-3p40031293400312986mer4003129240031314148.00-28.18
CAediting_1351345chr19_40031311_-ENSG00000128000.14ENST00000434248hsa-miR-6865-3p40031307400313137mer-m84003130640031329143.00-14.91
CAediting_1351351chr19_40031350_-ENSG00000128000.14ENST00000434248hsa-miR-1207-3p40031350400313567mer-m84003134940031366140.00-12.56
CAediting_1351351chr19_40031350_-ENSG00000128000.14ENST00000434248hsa-miR-64640031348400313547mer-m84003134740031365145.00-16.24
CAediting_1351353chr19_40031359_-ENSG00000128000.14ENST00000434248hsa-miR-805240031354400313607mer-1a4003135440031376147.00-22.00
CAediting_1351354chr19_40031360_-ENSG00000128000.14ENST00000434248hsa-miR-513a-5p40031359400313657mer-m84003135840031375156.00-19.76
CAediting_1351354chr19_40031360_-ENSG00000128000.14ENST00000434248hsa-miR-513a-5p40031359400313657mer-m84003135840031375156.00-19.76
CAediting_1351354chr19_40031360_-ENSG00000128000.14ENST00000434248hsa-miR-63840031354400313607mer-1a4003135440031378147.00-28.03
CAediting_1351362chr19_40031394_-ENSG00000128000.14ENST00000434248hsa-miR-4482-3p40031391400313988mer-1a4003139140031411157.00-12.45
CAediting_1351363chr19_40031395_-ENSG00000128000.14ENST00000434248hsa-miR-153-5p40031394400314018mer-1a4003139440031416155.00-11.62
CAediting_1351363chr19_40031395_-ENSG00000128000.14ENST00000434248hsa-miR-335-3p40031390400313978mer-1a4003139040031411153.00-7.95
CAediting_1351368chr19_40031401_-ENSG00000128000.14ENST00000434248hsa-miR-4768-3p40031400400314078mer-1a4003140040031419143.00-14.86
CAediting_1351370chr19_40031415_-ENSG00000128000.14ENST00000434248hsa-miR-1251-3p40031414400314207mer-m84003141340031433141.00-14.19
CAediting_1351370chr19_40031415_-ENSG00000128000.14ENST00000434248hsa-miR-6874-5p40031410400314167mer-m84003140940031431140.00-21.46
CAediting_1351372chr19_40031417_-ENSG00000128000.14ENST00000434248hsa-miR-148b-5p40031413400314197mer-m84003141240031433152.00-17.06
CAediting_1351372chr19_40031417_-ENSG00000128000.14ENST00000434248hsa-miR-4727-5p40031415400314228mer-1a4003141540031436152.00-16.20
CAediting_1351372chr19_40031417_-ENSG00000128000.14ENST00000434248hsa-miR-4769-3p40031416400314238mer-1a4003141640031437140.00-13.31
CAediting_1351372chr19_40031417_-ENSG00000128000.14ENST00000434248hsa-miR-5584-3p40031413400314186mer4003141240031434143.00-14.34
CAediting_1351372chr19_40031417_-ENSG00000128000.14ENST00000434248hsa-miR-6738-3p40031415400314217mer-m84003141440031438141.00-13.97
CAediting_1351372chr19_40031417_-ENSG00000128000.14ENST00000434248hsa-miR-6817-5p40031416400314238mer-1a4003141640031442147.00-21.30
CAediting_1351372chr19_40031417_-ENSG00000128000.14ENST00000434248hsa-miR-6874-3p40031413400314197mer-m84003141240031434159.00-16.00
CAediting_1351375chr19_40031425_-ENSG00000128000.14ENST00000434248hsa-miR-3190-5p40031425400314317mer-m84003142440031443154.00-17.13
CAediting_1351375chr19_40031425_-ENSG00000128000.14ENST00000434248hsa-miR-9851-5p40031423400314297mer-1a4003142340031444140.00-21.68
CAediting_1351377chr19_40031434_-ENSG00000128000.14ENST00000434248hsa-miR-320e40031431400314377mer-m84003143040031447151.00-12.57
CAediting_1351377chr19_40031434_-ENSG00000128000.14ENST00000434248hsa-miR-3663-5p40031434400314407mer-m84003143340031452144.00-20.26
CAediting_1351377chr19_40031434_-ENSG00000128000.14ENST00000434248hsa-miR-613140031433400314397mer-m84003143240031450140.00-13.79
CAediting_1351381chr19_40031446_-ENSG00000128000.14ENST00000434248hsa-miR-4732-3p40031446400314527mer-m84003144540031465155.00-23.59
CAediting_1351381chr19_40031446_-ENSG00000128000.14ENST00000434248hsa-miR-6771-3p40031442400314487mer-m84003144140031461155.00-26.23
CAediting_1351383chr19_40031454_-ENSG00000128000.14ENST00000434248hsa-miR-4726-3p40031453400314597mer-m84003145240031471149.00-27.37
CAediting_1351388chr19_40031486_-ENSG00000128000.14ENST00000434248hsa-miR-518a-3p40031482400314887mer-m84003148140031502145.00-17.15
CAediting_1351388chr19_40031486_-ENSG00000128000.14ENST00000434248hsa-miR-518a-3p40031482400314887mer-m84003148140031502145.00-17.15
CAediting_1351388chr19_40031486_-ENSG00000128000.14ENST00000434248hsa-miR-518b40031482400314887mer-m84003148140031501146.00-21.79
CAediting_1351388chr19_40031486_-ENSG00000128000.14ENST00000434248hsa-miR-518c-3p40031482400314887mer-m84003148140031502146.00-18.08
CAediting_1351388chr19_40031486_-ENSG00000128000.14ENST00000434248hsa-miR-518d-3p40031482400314887mer-m84003148140031501145.00-17.84
CAediting_1351388chr19_40031486_-ENSG00000128000.14ENST00000434248hsa-miR-518e-3p40031483400314897mer-m84003148240031503144.00-14.43
CAediting_1351388chr19_40031486_-ENSG00000128000.14ENST00000434248hsa-miR-518f-3p40031482400314887mer-m84003148140031501145.00-17.48
CAediting_1351388chr19_40031486_-ENSG00000128000.14ENST00000434248hsa-miR-526a-3p40031482400314887mer-m84003148140031501146.00-17.71
CAediting_1351390chr19_40031494_-ENSG00000128000.14ENST00000434248hsa-miR-805240031489400314957mer-1a4003148940031507148.00-27.62
CAediting_1351391chr19_40031495_-ENSG00000128000.14ENST00000434248hsa-miR-513a-5p40031494400315007mer-m84003149340031510148.00-17.62
CAediting_1351391chr19_40031495_-ENSG00000128000.14ENST00000434248hsa-miR-513a-5p40031494400315007mer-m84003149340031510148.00-17.62
CAediting_1351391chr19_40031495_-ENSG00000128000.14ENST00000434248hsa-miR-63840031489400314957mer-1a4003148940031513163.00-35.08
CAediting_1351392chr19_40031503_-ENSG00000128000.14ENST00000434248hsa-miR-3622a-5p40031498400315047mer-m84003149740031518151.00-26.77
CAediting_1351396chr19_40032462_-ENSG00000128000.14ENST00000434248hsa-miR-106a-3p40032460400324656mer4003245940032480141.00-21.13
CAediting_1351397chr19_40032475_-ENSG00000128000.14ENST00000434248hsa-miR-32640032473400324797mer-m84003247240032491140.00-14.14
CAediting_1351397chr19_40032475_-ENSG00000128000.14ENST00000434248hsa-miR-330-5p40032473400324797mer-m84003247240032493140.00-22.24
CAediting_1351397chr19_40032475_-ENSG00000128000.14ENST00000434248hsa-miR-431440032474400324807mer-m84003247340032490140.00-18.79
CAediting_1351397chr19_40032475_-ENSG00000128000.14ENST00000434248hsa-miR-514a-5p40032472400324787mer-m84003247140032491154.00-19.80
CAediting_1351397chr19_40032475_-ENSG00000128000.14ENST00000434248hsa-miR-514a-5p40032472400324787mer-m84003247140032491154.00-19.80
CAediting_1351397chr19_40032475_-ENSG00000128000.14ENST00000434248hsa-miR-514a-5p40032472400324787mer-m84003247140032491154.00-19.80
CAediting_1351401chr19_40032529_-ENSG00000128000.14ENST00000434248hsa-miR-3190-5p40032524400325307mer-m84003252340032542147.00-18.36
CAediting_1351401chr19_40032529_-ENSG00000128000.14ENST00000434248hsa-miR-548s40032525400325317mer-m84003252440032548146.00-17.42
CAediting_1351409chr19_40032596_-ENSG00000128000.14ENST00000434248hsa-miR-3925-3p40032593400325997mer-m84003259240032613165.00-24.91
CAediting_1351411chr19_40032606_-ENSG00000128000.14ENST00000434248hsa-miR-4691-3p40032602400326087mer-m84003260140032627152.00-29.86
CAediting_1351415chr19_40032655_-ENSG00000128000.14ENST00000434248hsa-miR-17-3p40032655400326617mer-m84003265440032675151.00-19.17
CAediting_1351415chr19_40032655_-ENSG00000128000.14ENST00000434248hsa-miR-59640032652400326587mer-m84003265140032671143.00-19.42
CAediting_1351325chr19_40030042_-ENSG00000128000.14ENST00000434248hsa-miR-27a-5p40030038400300458mer-1a4003003840030059154.00-18.30
CAediting_1351329chr19_40030054_-ENSG00000128000.14ENST00000434248hsa-miR-6856-3p40030052400300598mer-1a4003005240030073147.00-16.86
CAediting_1351332chr19_40031251_-ENSG00000128000.14ENST00000434248hsa-miR-3156-3p40031249400312557mer-m84003124840031268145.00-17.24
CAediting_1351332chr19_40031251_-ENSG00000128000.14ENST00000434248hsa-miR-3156-3p40031249400312557mer-m84003124840031268145.00-17.24
CAediting_1351332chr19_40031251_-ENSG00000128000.14ENST00000434248hsa-miR-4433a-5p40031248400312547mer-m84003124740031267140.00-16.13
CAediting_1351332chr19_40031251_-ENSG00000128000.14ENST00000434248hsa-miR-5588-3p40031247400312537mer-m84003124640031264150.00-23.90
CAediting_1351336chr19_40031259_-ENSG00000128000.14ENST00000434248hsa-miR-4632-3p40031257400312648mer-1a4003125740031276141.00-23.59
CAediting_1351337chr19_40031269_-ENSG00000128000.14ENST00000434248hsa-miR-4743-5p40031266400312727mer-m84003126540031284147.00-26.03
CAediting_1351346chr19_40031312_-ENSG00000128000.14ENST00000434248hsa-miR-150-5p40031310400313167mer-m84003130940031330140.00-17.08
CAediting_1351350chr19_40031343_-ENSG00000128000.14ENST00000434248hsa-miR-394340031339400313457mer-m84003133840031358146.00-22.28
CAediting_1351355chr19_40031368_-ENSG00000128000.14ENST00000434248hsa-miR-52140031367400313726mer4003136640031387140.00-17.54
CAediting_1351355chr19_40031368_-ENSG00000128000.14ENST00000434248hsa-miR-52140031367400313726mer4003136640031387140.00-17.54
CAediting_1351371chr19_40031416_-ENSG00000128000.14ENST00000434248hsa-miR-429440031410400314178mer-1a4003141040031426140.00-13.71
CAediting_1351371chr19_40031416_-ENSG00000128000.14ENST00000434248hsa-miR-431-5p40031414400314207mer-m84003141340031435141.00-17.49
CAediting_1351371chr19_40031416_-ENSG00000128000.14ENST00000434248hsa-miR-92440031412400314187mer-m84003141140031430163.00-20.25
CAediting_1351374chr19_40031423_-ENSG00000128000.14ENST00000434248hsa-miR-1212140031417400314248mer-1a4003141740031437140.00-18.52
CAediting_1351374chr19_40031423_-ENSG00000128000.14ENST00000434248hsa-miR-1306-3p40031423400314297mer-m84003142240031439152.00-21.14
CAediting_1351379chr19_40031438_-ENSG00000128000.14ENST00000434248hsa-miR-6878-3p40031434400314418mer-1a4003143440031456150.00-20.20
CAediting_1351385chr19_40031472_-ENSG00000128000.14ENST00000434248hsa-miR-317640031472400314787mer-m84003147140031489140.00-15.24
CAediting_1351385chr19_40031472_-ENSG00000128000.14ENST00000434248hsa-miR-3620-3p40031468400314747mer-m84003146740031489156.00-24.24
CAediting_1351385chr19_40031472_-ENSG00000128000.14ENST00000434248hsa-miR-3922-3p40031472400314787mer-m84003147140031492141.00-19.73
CAediting_1351389chr19_40031489_-ENSG00000128000.14ENST00000434248hsa-miR-371a-3p40031484400314907mer-m84003148340031505144.00-15.05
CAediting_1351398chr19_40032476_-ENSG00000128000.14ENST00000434248hsa-miR-6771-5p40032474400324818mer-1a4003247440032495159.00-28.55
CAediting_1351399chr19_40032493_-ENSG00000128000.14ENST00000434248hsa-miR-476740032488400324947mer-m84003248740032510142.00-17.99
CAediting_1351403chr19_40032545_-ENSG00000128000.14ENST00000434248hsa-miR-340-3p40032544400325507mer-m84003254340032564149.00-17.74
CAediting_1351403chr19_40032545_-ENSG00000128000.14ENST00000434248hsa-miR-6827-3p40032544400325507mer-m84003254340032563153.00-17.53
CAediting_1351405chr19_40032560_-ENSG00000128000.14ENST00000434248hsa-miR-480140032559400325646mer4003255840032581142.00-12.43
CAediting_1351406chr19_40032570_-ENSG00000128000.14ENST00000434248hsa-miR-1207-3p40032569400325768mer-1a4003256940032586144.00-14.68
CAediting_1351406chr19_40032570_-ENSG00000128000.14ENST00000434248hsa-miR-34a-3p40032567400325737mer-m84003256640032588147.00-10.17
CAediting_1351410chr19_40032599_-ENSG00000128000.14ENST00000434248hsa-miR-1287-3p40032594400326007mer-m84003259340032614160.00-24.25
CAediting_1351410chr19_40032599_-ENSG00000128000.14ENST00000434248hsa-miR-432340032596400326038mer-1a4003259640032613148.00-20.43
CAediting_1351414chr19_40032636_-ENSG00000128000.14ENST00000434248hsa-miR-463440032631400326388mer-1a4003263140032647146.00-27.51
CAediting_1351422chr19_40033544_-ENSG00000128000.14ENST00000434248hsa-miR-466340033542400335498mer-1a4003354240033568151.00-23.26
CAediting_1351422chr19_40033544_-ENSG00000128000.14ENST00000434248hsa-miR-4728-3p40033541400335477mer-m84003354040033564150.00-17.43
CAediting_1351423chr19_40033629_-ENSG00000128000.14ENST00000434248hsa-miR-807740033627400336348mer-1a4003362740033648154.00-17.54
CAediting_1351423chr19_40033629_-ENSG00000128000.14ENST00000221355hsa-miR-807740033627400336348mer-1a4003362740033648154.00-17.54
CAediting_1351426chr19_40034091_-ENSG00000128000.14ENST00000434248hsa-miR-670-3p40034086400340927mer-m84003408540034105171.00-23.61
CAediting_1351426chr19_40034091_-ENSG00000128000.14ENST00000221355hsa-miR-670-3p40034086400340927mer-m84003408540034105171.00-23.61
CAediting_1351427chr19_40034099_-ENSG00000128000.14ENST00000434248hsa-miR-513a-5p40034095400341028mer-1a4003409540034112145.00-20.55
CAediting_1351427chr19_40034099_-ENSG00000128000.14ENST00000434248hsa-miR-513a-5p40034095400341028mer-1a4003409540034112145.00-20.55
CAediting_1351427chr19_40034099_-ENSG00000128000.14ENST00000434248hsa-miR-6823-5p40034099400341057mer-m84003409840034120141.00-16.28
CAediting_1351427chr19_40034099_-ENSG00000128000.14ENST00000221355hsa-miR-513a-5p40034095400341028mer-1a4003409540034112145.00-20.55
CAediting_1351427chr19_40034099_-ENSG00000128000.14ENST00000221355hsa-miR-513a-5p40034095400341028mer-1a4003409540034112145.00-20.55
CAediting_1351427chr19_40034099_-ENSG00000128000.14ENST00000221355hsa-miR-6823-5p40034099400341057mer-m84003409840034120141.00-16.28
CAediting_1351395chr19_40032453_-ENSG00000128000.14ENST00000434248hsa-miR-464140032451400324577mer-m84003245040032474156.00-19.50
CAediting_1351395chr19_40032453_-ENSG00000128000.14ENST00000434248hsa-miR-6872-3p40032453400324597mer-m84003245240032472147.00-25.39

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1351390chr19_40031494_-ENSG00000128000.14ENST00000434248hsa-miR-10399-5p40031493400314997mer-m84003149240031512140-9.2
CAediting_1351391chr19_40031495_-ENSG00000128000.14ENST00000434248hsa-miR-10399-5p40031493400314997mer-m84003149240031512140-9.2
CAediting_1351353chr19_40031359_-ENSG00000128000.14ENST00000434248hsa-miR-10399-5p40031358400313647mer-m84003135740031378152-10.96
CAediting_1351354chr19_40031360_-ENSG00000128000.14ENST00000434248hsa-miR-10399-5p40031358400313647mer-m84003135740031378152-10.96
CAediting_1351403chr19_40032545_-ENSG00000128000.14ENST00000434248hsa-miR-10a-5p40032541400325477mer-m84003254040032562145-13.67
CAediting_1351403chr19_40032545_-ENSG00000128000.14ENST00000434248hsa-miR-10b-5p40032541400325477mer-m84003254040032562140-13.05
CAediting_1351332chr19_40031251_-ENSG00000128000.14ENST00000434248hsa-miR-126440031246400312516mer4003124540031267145-17.01
CAediting_1351407chr19_40032574_-ENSG00000128000.14ENST00000434248hsa-miR-1285-3p40032573400325797mer-m84003257240032593140-15.49
CAediting_1351407chr19_40032574_-ENSG00000128000.14ENST00000434248hsa-miR-1285-3p40032573400325797mer-m84003257240032593140-15.49
CAediting_1351387chr19_40031478_-ENSG00000128000.14ENST00000434248hsa-miR-150-5p40031477400314837mer-m84003147640031497140-15.8
CAediting_1351350chr19_40031343_-ENSG00000128000.14ENST00000434248hsa-miR-150-5p40031342400313487mer-m84003134140031362140-13.49
CAediting_1351349chr19_40031333_-ENSG00000128000.14ENST00000434248hsa-miR-197640031328400313358mer-1a4003132840031348149-21.37
CAediting_1351370chr19_40031415_-ENSG00000128000.14ENST00000434248hsa-miR-19a-5p40031414400314207mer-m84003141340031434153-13.92
CAediting_1351371chr19_40031416_-ENSG00000128000.14ENST00000434248hsa-miR-19a-5p40031414400314207mer-m84003141340031434153-13.92
CAediting_1351372chr19_40031417_-ENSG00000128000.14ENST00000434248hsa-miR-19a-5p40031414400314207mer-m84003141340031434153-13.92
CAediting_1351373chr19_40031418_-ENSG00000128000.14ENST00000434248hsa-miR-19a-5p40031414400314207mer-m84003141340031434153-13.92
CAediting_1351370chr19_40031415_-ENSG00000128000.14ENST00000434248hsa-miR-19b-1-5p40031414400314207mer-m84003141340031436155-15.05
CAediting_1351371chr19_40031416_-ENSG00000128000.14ENST00000434248hsa-miR-19b-1-5p40031414400314207mer-m84003141340031436155-15.05
CAediting_1351372chr19_40031417_-ENSG00000128000.14ENST00000434248hsa-miR-19b-1-5p40031414400314207mer-m84003141340031436155-15.05
CAediting_1351373chr19_40031418_-ENSG00000128000.14ENST00000434248hsa-miR-19b-1-5p40031414400314207mer-m84003141340031436155-15.05
CAediting_1351370chr19_40031415_-ENSG00000128000.14ENST00000434248hsa-miR-19b-2-5p40031414400314207mer-m84003141340031435155-14.56
CAediting_1351371chr19_40031416_-ENSG00000128000.14ENST00000434248hsa-miR-19b-2-5p40031414400314207mer-m84003141340031435155-14.56
CAediting_1351372chr19_40031417_-ENSG00000128000.14ENST00000434248hsa-miR-19b-2-5p40031414400314207mer-m84003141340031435155-14.56
CAediting_1351373chr19_40031418_-ENSG00000128000.14ENST00000434248hsa-miR-19b-2-5p40031414400314207mer-m84003141340031435155-14.56
CAediting_1351388chr19_40031486_-ENSG00000128000.14ENST00000434248hsa-miR-302a-3p40031483400314897mer-m84003148240031503143-11.02
CAediting_1351388chr19_40031486_-ENSG00000128000.14ENST00000434248hsa-miR-302b-3p40031483400314897mer-m84003148240031504141-9.54
CAediting_1351388chr19_40031486_-ENSG00000128000.14ENST00000434248hsa-miR-302c-3p40031483400314897mer-m84003148240031502145-11.96
CAediting_1351388chr19_40031486_-ENSG00000128000.14ENST00000434248hsa-miR-302d-3p40031483400314897mer-m84003148240031509147-13.36
CAediting_1351388chr19_40031486_-ENSG00000128000.14ENST00000434248hsa-miR-302e40031483400314897mer-m84003148240031498141-8.62
CAediting_1351398chr19_40032476_-ENSG00000128000.14ENST00000434248hsa-miR-30b-3p40032475400324828mer-1a4003247540032496147-15.96
CAediting_1351399chr19_40032493_-ENSG00000128000.14ENST00000434248hsa-miR-316540032491400324977mer-m84003249040032512148-14.49
CAediting_1351418chr19_40032680_-ENSG00000128000.14ENST00000434248hsa-miR-324-3p40032676400326827mer-m84003267540032697152-26.26
CAediting_1351403chr19_40032545_-ENSG00000128000.14ENST00000434248hsa-miR-339-5p40032542400325487mer-m84003254140032565151-18.58
CAediting_1351388chr19_40031486_-ENSG00000128000.14ENST00000434248hsa-miR-360940031482400314876mer4003148140031503140-17.98
CAediting_1351329chr19_40030054_-ENSG00000128000.14ENST00000434248hsa-miR-365140030052400300598mer-1a4003005240030075143-15.46
CAediting_1351337chr19_40031269_-ENSG00000128000.14ENST00000434248hsa-miR-365240031266400312727mer-m84003126540031284148-20.61
CAediting_1351398chr19_40032476_-ENSG00000128000.14ENST00000434248hsa-miR-3689a-3p40032475400324828mer-1a4003247540032496141-19.53
CAediting_1351398chr19_40032476_-ENSG00000128000.14ENST00000434248hsa-miR-3689b-3p40032475400324828mer-1a4003247540032496141-19.58
CAediting_1351398chr19_40032476_-ENSG00000128000.14ENST00000434248hsa-miR-3689c40032475400324828mer-1a4003247540032496141-19.58
CAediting_1351380chr19_40031440_-ENSG00000128000.14ENST00000434248hsa-miR-371a-5p40031438400314458mer-1a4003143840031457146-15.86
CAediting_1351388chr19_40031486_-ENSG00000128000.14ENST00000434248hsa-miR-372-3p40031483400314897mer-m84003148240031502153-16.03
CAediting_1351419chr19_40032685_-ENSG00000128000.14ENST00000434248hsa-miR-3925-3p40032684400326907mer-m84003268340032703146-15.43
CAediting_1351393chr19_40031512_-ENSG00000128000.14ENST00000434248hsa-miR-425240031507400315137mer-m84003150640031524142-21.88
CAediting_1351342chr19_40031294_-ENSG00000128000.14ENST00000434248hsa-miR-428440031290400312978mer-1a4003129040031308151-25.17
CAediting_1351425chr19_40034037_-ENSG00000128000.14ENST00000434248hsa-miR-432040034034400340407mer-m84003403340034049144-11.15
CAediting_1351415chr19_40032655_-ENSG00000128000.14ENST00000434248hsa-miR-432740032653400326597mer-m84003265240032671147-19.04
CAediting_1351403chr19_40032545_-ENSG00000128000.14ENST00000434248hsa-miR-442140032543400325497mer-m84003254240032563154-16.19
CAediting_1351412chr19_40032618_-ENSG00000128000.14ENST00000434248hsa-miR-447840032614400326207mer-m84003261340032629151-27.88
CAediting_1351420chr19_40032692_-ENSG00000128000.14ENST00000434248hsa-miR-448640032690400326978mer-1a4003269040032706145-19.23
CAediting_1351369chr19_40031410_-ENSG00000128000.14ENST00000434248hsa-miR-453440031408400314147mer-m84003140740031423140-15.17
CAediting_1351412chr19_40032618_-ENSG00000128000.14ENST00000434248hsa-miR-4649-3p40032617400326237mer-m84003261640032636140-13.09
CAediting_1351373chr19_40031418_-ENSG00000128000.14ENST00000434248hsa-miR-4659a-5p40031417400314248mer-1a4003141740031441149-16.39
CAediting_1351374chr19_40031423_-ENSG00000128000.14ENST00000434248hsa-miR-4659a-5p40031417400314248mer-1a4003141740031441149-16.39
CAediting_1351373chr19_40031418_-ENSG00000128000.14ENST00000434248hsa-miR-4659b-5p40031417400314248mer-1a4003141740031438149-18.5
CAediting_1351374chr19_40031423_-ENSG00000128000.14ENST00000434248hsa-miR-4659b-5p40031417400314248mer-1a4003141740031438149-18.5
CAediting_1351421chr19_40033539_-ENSG00000128000.14ENST00000434248hsa-miR-4714-5p40033534400335418mer-1a4003353440033555140-11.69
CAediting_1351343chr19_40031298_-ENSG00000128000.14ENST00000434248hsa-miR-4715-3p40031298400313047mer-m84003129740031319154-24.54
CAediting_1351374chr19_40031423_-ENSG00000128000.14ENST00000434248hsa-miR-4716-5p40031420400314267mer-m84003141940031440140-10.69
CAediting_1351375chr19_40031425_-ENSG00000128000.14ENST00000434248hsa-miR-4716-5p40031420400314267mer-m84003141940031440140-10.69
CAediting_1351352chr19_40031354_-ENSG00000128000.14ENST00000434248hsa-miR-4731-5p40031352400313576mer4003135140031371142-22.87
CAediting_1351356chr19_40031386_-ENSG00000128000.14ENST00000434248hsa-miR-4735-5p40031385400313917mer-m84003138440031405140-4.92
CAediting_1351357chr19_40031389_-ENSG00000128000.14ENST00000434248hsa-miR-4735-5p40031385400313917mer-m84003138440031405140-4.92
CAediting_1351358chr19_40031390_-ENSG00000128000.14ENST00000434248hsa-miR-4735-5p40031385400313917mer-m84003138440031405140-4.92
CAediting_1351348chr19_40031324_-ENSG00000128000.14ENST00000434248hsa-miR-476540031321400313277mer-m84003132040031341145-13.79
CAediting_1351343chr19_40031298_-ENSG00000128000.14ENST00000434248hsa-miR-4769-3p40031297400313026mer4003129640031318145-24.2
CAediting_1351374chr19_40031423_-ENSG00000128000.14ENST00000434248hsa-miR-4781-3p40031422400314287mer-m84003142140031442140-13.08
CAediting_1351375chr19_40031425_-ENSG00000128000.14ENST00000434248hsa-miR-4781-3p40031422400314287mer-m84003142140031442140-13.08
CAediting_1351376chr19_40031426_-ENSG00000128000.14ENST00000434248hsa-miR-4781-3p40031422400314287mer-m84003142140031442140-13.08
CAediting_1351418chr19_40032680_-ENSG00000128000.14ENST00000434248hsa-miR-4793-3p40032679400326857mer-m84003267840032700154-23.41
CAediting_1351400chr19_40032525_-ENSG00000128000.14ENST00000434248hsa-miR-479440032524400325307mer-m84003252340032545151-18.66
CAediting_1351401chr19_40032529_-ENSG00000128000.14ENST00000434248hsa-miR-479440032524400325307mer-m84003252340032545151-18.66
CAediting_1351331chr19_40031213_-ENSG00000128000.14ENST00000434248hsa-miR-4798-5p40031209400312157mer-m84003120840031230151-16.3
CAediting_1351355chr19_40031368_-ENSG00000128000.14ENST00000434248hsa-miR-501-3p40031367400313737mer-m84003136640031392141-13.78
CAediting_1351355chr19_40031368_-ENSG00000128000.14ENST00000434248hsa-miR-502-3p40031367400313737mer-m84003136640031387140-13.13
CAediting_1351389chr19_40031489_-ENSG00000128000.14ENST00000434248hsa-miR-5089-5p40031489400314957mer-m84003148840031507146-12.26
CAediting_1351390chr19_40031494_-ENSG00000128000.14ENST00000434248hsa-miR-5089-5p40031489400314957mer-m84003148840031507146-12.26
CAediting_1351352chr19_40031354_-ENSG00000128000.14ENST00000434248hsa-miR-5089-5p40031354400313607mer-m84003135340031373152-18.45
CAediting_1351353chr19_40031359_-ENSG00000128000.14ENST00000434248hsa-miR-5089-5p40031354400313607mer-m84003135340031373152-18.45
CAediting_1351388chr19_40031486_-ENSG00000128000.14ENST00000434248hsa-miR-512-3p40031484400314907mer-m84003148340031509153-24.18
CAediting_1351389chr19_40031489_-ENSG00000128000.14ENST00000434248hsa-miR-512-3p40031484400314907mer-m84003148340031509153-24.18
CAediting_1351388chr19_40031486_-ENSG00000128000.14ENST00000434248hsa-miR-512-3p40031484400314907mer-m84003148340031509153-24.18
CAediting_1351389chr19_40031489_-ENSG00000128000.14ENST00000434248hsa-miR-512-3p40031484400314907mer-m84003148340031509153-24.18
CAediting_1351407chr19_40032574_-ENSG00000128000.14ENST00000434248hsa-miR-5189-5p40032573400325797mer-m84003257240032597153-25.53
CAediting_1351388chr19_40031486_-ENSG00000128000.14ENST00000434248hsa-miR-519d-3p40031482400314887mer-m84003148140031501146-14.53
CAediting_1351388chr19_40031486_-ENSG00000128000.14ENST00000434248hsa-miR-520a-3p40031483400314897mer-m84003148240031503140-11.03
CAediting_1351388chr19_40031486_-ENSG00000128000.14ENST00000434248hsa-miR-520b-3p40031483400314897mer-m84003148240031501141-16.52
CAediting_1351388chr19_40031486_-ENSG00000128000.14ENST00000434248hsa-miR-520c-3p40031483400314897mer-m84003148240031502146-16.52
CAediting_1351388chr19_40031486_-ENSG00000128000.14ENST00000434248hsa-miR-520d-3p40031483400314897mer-m84003148240031503140-13.09
CAediting_1351388chr19_40031486_-ENSG00000128000.14ENST00000434248hsa-miR-520e-3p40031483400314897mer-m84003148240031502140-13.32
CAediting_1351388chr19_40031486_-ENSG00000128000.14ENST00000434248hsa-miR-520g-3p40031481400314877mer-m84003148040031502151-15.87
CAediting_1351388chr19_40031486_-ENSG00000128000.14ENST00000434248hsa-miR-520h40031481400314877mer-m84003148040031501150-15.08
CAediting_1351388chr19_40031486_-ENSG00000128000.14ENST00000434248hsa-miR-526b-3p40031482400314887mer-m84003148140031501146-16.66
CAediting_1351376chr19_40031426_-ENSG00000128000.14ENST00000434248hsa-miR-548s40031425400314328mer-1a4003142540031447140-10.52
CAediting_1351409chr19_40032596_-ENSG00000128000.14ENST00000434248hsa-miR-55440032594400326018mer-1a4003259440032617155-22.37
CAediting_1351410chr19_40032599_-ENSG00000128000.14ENST00000434248hsa-miR-55440032594400326018mer-1a4003259440032617155-22.37
CAediting_1351402chr19_40032537_-ENSG00000128000.14ENST00000434248hsa-miR-5586-3p40032533400325397mer-m84003253240032553154-18.47
CAediting_1351410chr19_40032599_-ENSG00000128000.14ENST00000434248hsa-miR-5588-3p40032596400326038mer-1a4003259640032615148-17.06
CAediting_1351351chr19_40031350_-ENSG00000128000.14ENST00000434248hsa-miR-56240031347400313537mer-m84003134640031365150-12.74
CAediting_1351411chr19_40032606_-ENSG00000128000.14ENST00000434248hsa-miR-569040032602400326087mer-m84003260140032621145-17.72
CAediting_1351339chr19_40031279_-ENSG00000128000.14ENST00000434248hsa-miR-569340031276400312827mer-m84003127540031295143-19.62
CAediting_1351351chr19_40031350_-ENSG00000128000.14ENST00000434248hsa-miR-569740031346400313527mer-m84003134540031367149-17.81
CAediting_1351403chr19_40032545_-ENSG00000128000.14ENST00000434248hsa-miR-5699-3p40032543400325497mer-m84003254240032563153-17.34
CAediting_1351337chr19_40031269_-ENSG00000128000.14ENST00000434248hsa-miR-578740031266400312716mer4003126540031284144-27.69
CAediting_1351407chr19_40032574_-ENSG00000128000.14ENST00000434248hsa-miR-61240032573400325797mer-m84003257240032595149-24.82
CAediting_1351420chr19_40032692_-ENSG00000128000.14ENST00000434248hsa-miR-62240032687400326937mer-m84003268640032706140-17.25
CAediting_1351325chr19_40030042_-ENSG00000128000.14ENST00000434248hsa-miR-629-5p40030038400300458mer-1a4003003840030058146-16.1
CAediting_1351326chr19_40030043_-ENSG00000128000.14ENST00000434248hsa-miR-629-5p40030038400300458mer-1a4003003840030058146-16.1
CAediting_1351327chr19_40030044_-ENSG00000128000.14ENST00000434248hsa-miR-629-5p40030038400300458mer-1a4003003840030058146-16.1
CAediting_1351390chr19_40031494_-ENSG00000128000.14ENST00000434248hsa-miR-6504-3p40031493400314997mer-m84003149240031514151-14.23
CAediting_1351391chr19_40031495_-ENSG00000128000.14ENST00000434248hsa-miR-6504-3p40031493400314997mer-m84003149240031514151-14.23
CAediting_1351353chr19_40031359_-ENSG00000128000.14ENST00000434248hsa-miR-6504-3p40031358400313647mer-m84003135740031381148-13.8
CAediting_1351354chr19_40031360_-ENSG00000128000.14ENST00000434248hsa-miR-6504-3p40031358400313647mer-m84003135740031381148-13.8
CAediting_1351389chr19_40031489_-ENSG00000128000.14ENST00000434248hsa-miR-6506-5p40031488400314947mer-m84003148740031509144-16.21
CAediting_1351352chr19_40031354_-ENSG00000128000.14ENST00000434248hsa-miR-6506-5p40031353400313597mer-m84003135240031373152-15.26
CAediting_1351369chr19_40031410_-ENSG00000128000.14ENST00000434248hsa-miR-6514-5p40031409400314157mer-m84003140840031430140-17.66
CAediting_1351415chr19_40032655_-ENSG00000128000.14ENST00000434248hsa-miR-6516-5p40032655400326617mer-m84003265440032678146-17.94
CAediting_1351400chr19_40032525_-ENSG00000128000.14ENST00000434248hsa-miR-664a-5p40032524400325307mer-m84003252340032545148-15.24
CAediting_1351401chr19_40032529_-ENSG00000128000.14ENST00000434248hsa-miR-664a-5p40032524400325307mer-m84003252340032545148-15.24
CAediting_1351349chr19_40031333_-ENSG00000128000.14ENST00000434248hsa-miR-6747-3p40031330400313378mer-1a4003133040031351150-24.11
CAediting_1351399chr19_40032493_-ENSG00000128000.14ENST00000434248hsa-miR-6756-5p40032490400324956mer4003248940032511153-29.06
CAediting_1351393chr19_40031512_-ENSG00000128000.14ENST00000434248hsa-miR-6772-3p40031512400315176mer4003151140031533141-19.71
CAediting_1351387chr19_40031478_-ENSG00000128000.14ENST00000434248hsa-miR-6778-3p40031475400314817mer-m84003147440031494143-13.97
CAediting_1351350chr19_40031343_-ENSG00000128000.14ENST00000434248hsa-miR-6778-3p40031340400313467mer-m84003133940031359140-14.56
CAediting_1351398chr19_40032476_-ENSG00000128000.14ENST00000434248hsa-miR-6779-5p40032475400324828mer-1a4003247540032498147-25.77
CAediting_1351403chr19_40032545_-ENSG00000128000.14ENST00000434248hsa-miR-6818-3p40032545400325517mer-m84003254440032565140-12.56
CAediting_1351325chr19_40030042_-ENSG00000128000.14ENST00000434248hsa-miR-6839-3p40030038400300447mer-m84003003740030059146-12.24
CAediting_1351326chr19_40030043_-ENSG00000128000.14ENST00000434248hsa-miR-6839-3p40030038400300447mer-m84003003740030059146-12.24
CAediting_1351378chr19_40031435_-ENSG00000128000.14ENST00000434248hsa-miR-6843-3p40031434400314418mer-1a4003143440031453152-20.27
CAediting_1351379chr19_40031438_-ENSG00000128000.14ENST00000434248hsa-miR-6843-3p40031434400314418mer-1a4003143440031453152-20.27
CAediting_1351380chr19_40031440_-ENSG00000128000.14ENST00000434248hsa-miR-6843-3p40031434400314418mer-1a4003143440031453152-20.27
CAediting_1351395chr19_40032453_-ENSG00000128000.14ENST00000434248hsa-miR-6847-3p40032451400324577mer-m84003245040032472153-22.19
CAediting_1351378chr19_40031435_-ENSG00000128000.14ENST00000434248hsa-miR-6848-3p40031434400314418mer-1a4003143440031451142-15.89
CAediting_1351379chr19_40031438_-ENSG00000128000.14ENST00000434248hsa-miR-6848-3p40031434400314418mer-1a4003143440031451142-15.89
CAediting_1351380chr19_40031440_-ENSG00000128000.14ENST00000434248hsa-miR-6848-3p40031434400314418mer-1a4003143440031451142-15.89
CAediting_1351386chr19_40031473_-ENSG00000128000.14ENST00000434248hsa-miR-6878-3p40031472400314798mer-1a4003147240031492142-14.14
CAediting_1351387chr19_40031478_-ENSG00000128000.14ENST00000434248hsa-miR-6878-3p40031472400314798mer-1a4003147240031492142-14.14
CAediting_1351412chr19_40032618_-ENSG00000128000.14ENST00000434248hsa-miR-6884-5p40032613400326197mer-m84003261240032632155-21.75
CAediting_1351343chr19_40031298_-ENSG00000128000.14ENST00000434248hsa-miR-6890-3p40031294400313018mer-1a4003129440031311150-21.99
CAediting_1351391chr19_40031495_-ENSG00000128000.14ENST00000434248hsa-miR-7151-3p40031494400315018mer-1a4003149440031514144-16.98
CAediting_1351412chr19_40032618_-ENSG00000128000.14ENST00000434248hsa-miR-7160-5p40032616400326227mer-m84003261540032634149-21.49
CAediting_1351402chr19_40032537_-ENSG00000128000.14ENST00000434248hsa-miR-75940032532400325387mer-m84003253140032551153-17.2
CAediting_1351418chr19_40032680_-ENSG00000128000.14ENST00000434248hsa-miR-770340032680400326867mer-m84003267940032701154-19.4
CAediting_1351419chr19_40032685_-ENSG00000128000.14ENST00000434248hsa-miR-770340032680400326867mer-m84003267940032701154-19.4
CAediting_1351410chr19_40032599_-ENSG00000128000.14ENST00000434248hsa-miR-797740032599400326057mer-m84003259840032614145-12.78
CAediting_1351348chr19_40031324_-ENSG00000128000.14ENST00000434248hsa-miR-806240031322400313287mer-m84003132140031341141-11.25
CAediting_1351369chr19_40031410_-ENSG00000128000.14ENST00000434248hsa-miR-808240031408400314147mer-m84003140740031428142-13.26
CAediting_1351397chr19_40032475_-ENSG00000128000.14ENST00000434248hsa-miR-887-5p40032474400324818mer-1a4003247440032494147-13.95
CAediting_1351398chr19_40032476_-ENSG00000128000.14ENST00000434248hsa-miR-887-5p40032474400324818mer-1a4003247440032494147-13.95
CAediting_1351425chr19_40034037_-ENSG00000128000.14ENST00000221355hsa-miR-432040034034400340407mer-m84003403340034049144-11.15

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_980496chr14_31014685_-ENSG00000128000.14ENST00000434248hsa-miR-624-3p40034014400340207mer-m84003401340034035154-20.4
CAediting_980496chr14_31014685_-ENSG00000128000.14ENST00000434248hsa-miR-624-3p40029780400297867mer-m84002977940029797151-12.48
CAediting_980496chr14_31014685_-ENSG00000128000.14ENST00000434248hsa-miR-624-3p40033848400338547mer-m84003384740033872145-20.67
CAediting_393chr1_1167164_+ENSG00000128000.14ENST00000434248hsa-miR-200b-3p40031622400316287mer-m84003162140031642151-8.97
CAediting_980496chr14_31014685_-ENSG00000128000.14ENST00000221355hsa-miR-624-3p40034014400340207mer-m84003401340034035154-20.4
CAediting_980496chr14_31014685_-ENSG00000128000.14ENST00000221355hsa-miR-624-3p40033848400338547mer-m84003384740033872145-20.67
CAediting_1229415chr17_67471547_+ENSG00000128000.14ENST00000434248hsa-miR-548aa40030912400309187mer-m84003091140030932145-7.43
CAediting_86358chr1_109598906_+ENSG00000128000.14ENST00000434248hsa-miR-197-5p40032490400324967mer-m84003248940032514158-32.96
CAediting_228905chr2_188297554_+ENSG00000128000.14ENST00000434248hsa-miR-561-3p40030720400307278mer-1a4003072040030741142-10.57
CAediting_442554chr5_154685830_+ENSG00000128000.14ENST00000434248hsa-miR-130340028936400289427mer-m84002893540028956140-14.67
CAediting_524911chr7_5495852_-ENSG00000128000.14ENST00000434248hsa-miR-589-3p40029375400293828mer-1a4002937540029399146-17.75

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1160181chr17_7017644_-ENSG00000128000.14ENST00000434248hsa-miR-195-3p40030018400300247mer-m84003001740030038142-4.81
CAediting_1160181chr17_7017644_-ENSG00000128000.14ENST00000434248hsa-miR-195-3p40029818400298247mer-m84002981740029837141-4.78
CAediting_1306323chr19_13836462_-ENSG00000128000.14ENST00000434248hsa-miR-27a-3p40029643400296486mer4002964240029662149-17.99
CAediting_1306323chr19_13836462_-ENSG00000128000.14ENST00000434248hsa-miR-27a-3p40033729400337368mer-1a4003372940033751149-16.49
CAediting_228905chr2_188297554_+ENSG00000128000.14ENST00000434248hsa-miR-561-3p40030847400308526mer4003084640030867147-10.38
CAediting_228905chr2_188297554_+ENSG00000128000.14ENST00000434248hsa-miR-561-3p40033989400339957mer-m84003398840034011150-5.33
CAediting_524911chr7_5495852_-ENSG00000128000.14ENST00000434248hsa-miR-589-3p40028534400285407mer-m84002853340028556142-9.6
CAediting_980496chr14_31014685_-ENSG00000128000.14ENST00000434248hsa-miR-624-3p40032079400320846mer4003207840032100141-14.58

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for ZNF780B

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for ZNF780B

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
BLCACAediting_1351333chr19_40031255_-0.01586388869622730.255036939739057....
LGGCAediting_1351333chr19_40031255_-0.01747428964796110.140202966510305....
BRCACAediting_1351333chr19_40031255_-0.01454794795831770.135226943305841....
GBMCAediting_1351333chr19_40031255_-0.005403287547542670.26967002256871....
THCACAediting_1351333chr19_40031255_-0.000219664417980690.1991262424042....
UCECCAediting_1351333chr19_40031255_-0.04729043161388730.186213382302402....
KIRPCAediting_1351333chr19_40031255_-0.0008110803768968260.420930471621113....
ESCACAediting_1351333chr19_40031255_-0.02555074893218340.263107785787866....
OVCAediting_1351333chr19_40031255_-0.0221644097514830.154180799715854....
PCPGCAediting_1351333chr19_40031255_-1.14992150654569e-080.45775719270745....
SKCMCAediting_1351333chr19_40031255_-0.0004341127771022250.331256248244544....
SARCCAediting_1351333chr19_40031255_-0.000466968598833340.379994777537959....
TGCTCAediting_1351333chr19_40031255_-0.00138282602673710.394368202242831....
THYMCAediting_1351333chr19_40031255_-0.0005885692340642790.390203541332287....
BLCACAediting_1351334chr19_40031256_-0.003175791319046560.221817984763297....
BRCACAediting_1351334chr19_40031256_-0.04240213214410390.0952974203756892....
LUADCAediting_1351334chr19_40031256_-0.02394906233771570.201900581294689....
KIRPCAediting_1351334chr19_40031256_-0.04252057757702920.187868481037857....
OVCAediting_1351334chr19_40031256_-0.007200619125152010.16694637279339....
PAADCAediting_1351334chr19_40031256_-....0.04414603350923640.236299898253567
PCPGCAediting_1351334chr19_40031256_-1.94830267760541e-070.410828780114024....
SKCMCAediting_1351334chr19_40031256_-0.0006046252896670790.245943902902726....
SARCCAediting_1351334chr19_40031256_-0.02337406620192960.21707088079204....
TGCTCAediting_1351334chr19_40031256_-0.0009447455185535670.330519688185262....
THYMCAediting_1351334chr19_40031256_-0.02390614392992750.220341284111457..0.0006733664431984250.326587326541464
LGGCAediting_1351335chr19_40031257_-0.01457976058706720.24008051400983....
BRCACAediting_1351335chr19_40031257_-8.40592279794843e-060.328738731474125....
GBMCAediting_1351335chr19_40031257_-0.03566385589364360.265219330259291....
PRADCAediting_1351335chr19_40031257_-0.0001427735706217930.384323658784158....
THCACAediting_1351335chr19_40031257_-0.0002993909661962840.26867131362985....
PCPGCAediting_1351335chr19_40031257_-3.47038320934175e-050.377476999671243....
LGGCAediting_1351339chr19_40031279_-..0.01940218572364260.24337414432534..
STADCAediting_1351339chr19_40031279_-..0.0104589783631630.339558113685506..
THCACAediting_1351339chr19_40031279_-..0.01411036080951260.22082501217025..
PCPGCAediting_1351339chr19_40031279_-..0.0005211620029145440.4097180572428810.02051626368319670.280484579073979
SKCMCAediting_1351339chr19_40031279_-..0.03214716209057730.286738950108323..
COADCAediting_1351340chr19_40031289_-0.009969323493356860.242566655760537....
PCPGCAediting_1351340chr19_40031289_-0.01669770555037690.212883489296889....
SKCMCAediting_1351340chr19_40031289_-0.0154077568990450.175089849675041....
TGCTCAediting_1351340chr19_40031289_-....0.03578752743787570.196001975578929
THYMCAediting_1351340chr19_40031289_-..0.04135045086230720.2108591101009962.81107312866928e-070.500397882514062
LGGCAediting_1351349chr19_40031333_-....0.03528274688138630.107185457752432
LUSCCAediting_1351349chr19_40031333_-0.01921179741439120.187305844790471....
PCPGCAediting_1351349chr19_40031333_-0.04762985336339090.153974211436152....
SKCMCAediting_1351349chr19_40031333_-0.000130573679614840.297863922438668....
TGCTCAediting_1351349chr19_40031333_-0.009257926416958270.260329095463626..0.03528017311492230.211856036768571
THYMCAediting_1351349chr19_40031333_-..0.01390008417865930.2360887633036360.01158555981477850.242113913380967
LUADCAediting_1351351chr19_40031350_-0.04691003998630750.189043966065699....
KIRPCAediting_1351351chr19_40031350_-0.03718178311063160.1962950417715....
PCPGCAediting_1351351chr19_40031350_-8.69551753741147e-060.3455891358174380.03592900401765020.167038429325985..
SKCMCAediting_1351351chr19_40031350_-0.01134422725488060.208310832101025....
TGCTCAediting_1351351chr19_40031350_-0.0007300904723081870.317339825637091....
THYMCAediting_1351351chr19_40031350_-0.000701394171367770.322613387893320.005828712463678920.2648871450038516.18578789707345e-050.377258221157
BLCACAediting_1351352chr19_40031354_-0.04304156928687460.23589006835823....
LGGCAediting_1351352chr19_40031354_-0.02318876713423420.146827146695806....
KIRPCAediting_1351352chr19_40031354_-0.01080292061930260.350703784694953....
PCPGCAediting_1351352chr19_40031354_-0.006244172602432290.232557685801818....
TGCTCAediting_1351352chr19_40031354_-0.01195001392491050.325253151679802....
THYMCAediting_1351352chr19_40031354_-0.02206620677233120.243823164078381..0.008340072968131230.279576147428865
PCPGCAediting_1351353chr19_40031359_-0.02291702446904250.207566765148496....
TGCTCAediting_1351353chr19_40031359_-0.01586093758754560.256481001793439..0.01127563538464640.268977337538127
THYMCAediting_1351353chr19_40031359_-....0.008343520032134620.279561892454295
BRCACAediting_1351358chr19_40031390_-0.001269508728516560.377626632156473....
LUADCAediting_1351365chr19_40031398_-0.004728166937353650.343640942461602....
PRADCAediting_1351365chr19_40031398_-0.04077238744449340.131348659350625....
THCACAediting_1351365chr19_40031398_-0.004807273350325570.153032485306716....
KIRPCAediting_1351365chr19_40031398_-0.04717168558911770.22546676957935....
PCPGCAediting_1351365chr19_40031398_-0.02081994990401450.212591175874989....
TGCTCAediting_1351365chr19_40031398_-....0.0009908112277215840.368040765456754
THYMCAediting_1351365chr19_40031398_-0.02583951742199080.229852549364549....
SKCMCAediting_1351366chr19_40031399_-0.03324904927744480.189835651947566....
BRCACAediting_1351367chr19_40031400_-0.001245779129574950.146474097590867....
PCPGCAediting_1351367chr19_40031400_-6.41044501225216e-050.323531422521229....
SKCMCAediting_1351367chr19_40031400_-0.0003745838350536410.26898081308211....
SARCCAediting_1351367chr19_40031400_-....0.04519987389529620.186340304330605
BRCACAediting_1351368chr19_40031401_-....0.0279342554749190.106140228925271
PCPGCAediting_1351368chr19_40031401_-0.01989207862089370.200222986921795....
THYMCAediting_1351368chr19_40031401_-....0.04812616678761010.193352967186082
LGGCAediting_1351369chr19_40031410_-..0.0149209747230250.2018189435078890.0001128374823417450.315170512631054
PRADCAediting_1351369chr19_40031410_-..0.0001471505654150070.246159664918111..
PCPGCAediting_1351369chr19_40031410_-..0.04439417871673990.187845870209513..
SKCMCAediting_1351369chr19_40031410_-..0.01678844495437110.277231276307192..
THYMCAediting_1351369chr19_40031410_-..0.003688086265234240.352598817223154..
THCACAediting_1351376chr19_40031426_-0.01467446750951510.204426056117236....
BRCACAediting_1351382chr19_40031449_-0.02326829224834010.302878750157213....
STADCAediting_1351383chr19_40031454_-0.02620094564024170.305330358096734....
THCACAediting_1351383chr19_40031454_-....0.001179513238131750.296305506580701
GBMCAediting_1351384chr19_40031464_-0.01374098398463620.308980616333947....
PCPGCAediting_1351390chr19_40031494_-0.0003622281375558030.432181506188694....
BLCACAediting_1351391chr19_40031495_-0.01408021205453140.315462987201398....
LGGCAediting_1351391chr19_40031495_-0.01852985819024770.308344466528238....
BRCACAediting_1351391chr19_40031495_-4.9999952705703e-070.295497574761279....
LUADCAediting_1351391chr19_40031495_-0.006302014431865850.346033184124569....
PRADCAediting_1351391chr19_40031495_-8.31664886291919e-050.345911558732958....
THCACAediting_1351391chr19_40031495_-2.64748645540755e-060.343652837042633....
PCPGCAediting_1351391chr19_40031495_-0.000378599696265210.346957948853678....
SKCMCAediting_1351391chr19_40031495_-0.003492883160605820.371287287660066....
SARCCAediting_1351391chr19_40031495_-0.004596901720262260.352568040250056....
TGCTCAediting_1351391chr19_40031495_-0.04092068646184060.287319803803233....
THYMCAediting_1351391chr19_40031495_-0.000292440169111020.448155992946978..8.80904997688319e-060.535259643059741
SKCMCAediting_1351409chr19_40032596_-0.01288309089454630.231285603875088....

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Relation with cancer stages for ZNF780B

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.
BLCApathologic_stageCAediting_1351334chr19_40031256_-0.02716017765892090.167501869457079
BLCApathologic_stageCAediting_1351368chr19_40031401_-0.005456541301466330.218729370076499
BRCApathologic_stageCAediting_1351367chr19_40031400_-0.02210881632226680.105211218020876
BRCApathologic_stageCAediting_1351369chr19_40031410_-0.01019315737225240.183598471349539
COADpathologic_stageCAediting_1351349chr19_40031333_-0.03012811559591210.231315084839403
COADpathologic_stageCAediting_1351366chr19_40031399_-0.0364565558550725-0.256094686998822
ESCApathologic_stageCAediting_1351349chr19_40031333_-0.0482143765263780.256148603204496
HNSCpathologic_stageCAediting_1351351chr19_40031350_-0.008317807698631360.411620631419366
KIRPclinical_stageCAediting_1351334chr19_40031256_-0.008436374598023770.294450155879482
KIRPclinical_stageCAediting_1351352chr19_40031354_-0.04627042859850310.34937432871745
KIRPclinical_stageCAediting_1351367chr19_40031400_-0.04121777679337040.237931241323412
KIRPpathologic_stageCAediting_1351334chr19_40031256_-0.03431459555609540.205793029347117
KIRPpathologic_stageCAediting_1351352chr19_40031354_-0.04058539156700970.306494005501108
LIHCpathologic_stageCAediting_1351334chr19_40031256_-0.0233845503237424-0.30536670287649
LUSCpathologic_stageCAediting_1351353chr19_40031359_-0.004606268213727880.27707216062306
OVclinical_stageCAediting_1351335chr19_40031257_-0.0245855805320788-0.167063019160932
PAADpathologic_stageCAediting_1351351chr19_40031350_-0.0481436914531662-0.254100625736927
SKCMpathologic_stageCAediting_1351409chr19_40032596_-0.0279959736399791-0.219803059143994
STADpathologic_stageCAediting_1351365chr19_40031398_-0.02688440213190590.283395992471769
STADpathologic_stageCAediting_1351367chr19_40031400_-0.0295364762019760.224592258399312
STADpathologic_stageCAediting_1351368chr19_40031401_-0.004234398521610690.324530479337274
TGCTpathologic_stageCAediting_1351365chr19_40031398_-0.0354112822359109-0.333596180943713
THCApathologic_stageCAediting_1351367chr19_40031400_-0.008067420972460270.134490893748811

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Relation with survival for ZNF780B

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR
LGGCAediting_1351352chr19_40031354_-0.0220035185842830.000596199134.01
STADCAediting_1351335chr19_40031257_-0.04011777853117360.02821590.00776869
ESCACAediting_1351353chr19_40031359_-0.003008191263737640.000499546159.019
ESCACAediting_1351366chr19_40031399_-0.0001602906450671740.00113888653.814
OVCAediting_1351334chr19_40031256_-0.001904487189600010.008203143.94918
OVCAediting_1351335chr19_40031257_-0.007273639330194760.0051184513.8762
OVCAediting_1351351chr19_40031350_-0.03082453499767050.006102424.77541
OVCAediting_1351368chr19_40031401_-0.01005024260675010.01249814.68806
SKCMCAediting_1351409chr19_40032596_-0.01251123580348030.04988220.126791

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RelatedDrugs for ZNF780B

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for ZNF780B

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource