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Editing gene: ZNF610 (CAeditome ID:162963)

Gene summary for ZNF610

Gene summary

Gene information	Gene symbol	ZNF610
	Gene ID	162963
	Gene name	zinc finger protein 610
	Synonyms	-
	Cytomap	19q13.41
	Type of gene	protein-coding
	Description	zinc finger protein 610zink finger protein
	Modification date	20210518
	UniProtAcc	Q8N9Z0
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for ZNF610

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000167554.13

RNA A-to-I editing events in Cancer.

CAediting_1381213(52346829, +), CAediting_1381214(52346830, +), CAediting_1381215(52347711, +), CAediting_1381216(52347733, +), CAediting_1381217(52347745, +), CAediting_1381218(52347797, +), CAediting_1381219(52350957, +), CAediting_1381220(52357329, +), CAediting_1381221(52357468, +), CAediting_1381222(52357493, +), CAediting_1381223(52357494, +), CAediting_1381224(52357498, +), CAediting_1381225(52357524, +), CAediting_1381226(52357696, +), CAediting_1381227(52366661, +), CAediting_1381228(52366664, +), CAediting_1381229(52367179, +), CAediting_1381230(52367185, +), CAediting_1381231(52367188, +), CAediting_1381232(52367198, +), CAediting_1381233(52367203, +), CAediting_1381234(52367204, +), CAediting_1381235(52367219, +), CAediting_1381236(52367223, +), CAediting_1381237(52367224, +), CAediting_1381238(52367227, +), CAediting_1381239(52367228, +), CAediting_1381240(52367241, +), CAediting_1381241(52367263, +), CAediting_1381242(52367290, +), CAediting_1381243(52367291, +), CAediting_1381244(52367334, +), CAediting_1381245(52367345, +), CAediting_1381246(52367346, +), CAediting_1381247(52367347, +), CAediting_1381248(52367364, +), CAediting_1381249(52367368, +), CAediting_1381250(52367386, +), CAediting_1381251(52367387, +), CAediting_1381252(52367408, +),

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RNA editing positional annotations for ZNF610 using Annovar

Protein coding RNA editing(s).

CAeditome ID	Position	Variant type	ENST	NTchange	AAchange	SIFT_score	Polyphen2_HVAR_score	PROVEAN_pred
CAediting_1381227	chr19_52366661_+	nonsynonymous SNV	ENST00000321287.11	c.A1283G	p.Y428C	D	D	D
CAediting_1381227	chr19_52366661_+	nonsynonymous SNV	ENST00000327920.11	c.A1283G	p.Y428C	D	D	D
CAediting_1381227	chr19_52366661_+	nonsynonymous SNV	ENST00000403906.6	c.A1283G	p.Y428C	D	D	D
CAediting_1381227	chr19_52366661_+	nonsynonymous SNV	ENST00000601151.4	c.A1154G	p.Y385C	D	D	D
CAediting_1381227	chr19_52366661_+	nonsynonymous SNV	ENST00000613461.2	c.A1154G	p.Y385C	D	D	D
CAediting_1381227	chr19_52366661_+	nonsynonymous SNV	ENST00000616431.2	c.A1283G	p.Y428C	D	D	D
CAediting_1381228	chr19_52366664_+	nonsynonymous SNV	ENST00000321287.11	c.A1286G	p.K429R	D	B	N
CAediting_1381228	chr19_52366664_+	nonsynonymous SNV	ENST00000327920.11	c.A1286G	p.K429R	D	B	N
CAediting_1381228	chr19_52366664_+	nonsynonymous SNV	ENST00000403906.6	c.A1286G	p.K429R	D	B	N
CAediting_1381228	chr19_52366664_+	nonsynonymous SNV	ENST00000601151.4	c.A1157G	p.K386R	D	B	N
CAediting_1381228	chr19_52366664_+	nonsynonymous SNV	ENST00000613461.2	c.A1157G	p.K386R	D	B	N
CAediting_1381228	chr19_52366664_+	nonsynonymous SNV	ENST00000616431.2	c.A1286G	p.K429R	D	B	N

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1381213	chr19_52346829_+	ncRNA_intronic
CAediting_1381214	chr19_52346830_+	ncRNA_intronic
CAediting_1381215	chr19_52347711_+	ncRNA_exonic
CAediting_1381216	chr19_52347733_+	ncRNA_exonic
CAediting_1381217	chr19_52347745_+	ncRNA_exonic
CAediting_1381218	chr19_52347797_+	ncRNA_exonic
CAediting_1381219	chr19_52350957_+	intronic
CAediting_1381220	chr19_52357329_+	intronic
CAediting_1381221	chr19_52357468_+	intronic
CAediting_1381222	chr19_52357493_+	intronic
CAediting_1381223	chr19_52357494_+	intronic
CAediting_1381224	chr19_52357498_+	intronic
CAediting_1381225	chr19_52357524_+	intronic
CAediting_1381226	chr19_52357696_+	intronic
CAediting_1381227	chr19_52366661_+	exonic
CAediting_1381228	chr19_52366664_+	exonic
CAediting_1381229	chr19_52367179_+	UTR3
CAediting_1381230	chr19_52367185_+	UTR3
CAediting_1381231	chr19_52367188_+	UTR3
CAediting_1381232	chr19_52367198_+	UTR3
CAediting_1381233	chr19_52367203_+	UTR3
CAediting_1381234	chr19_52367204_+	UTR3
CAediting_1381235	chr19_52367219_+	UTR3
CAediting_1381236	chr19_52367223_+	UTR3
CAediting_1381237	chr19_52367224_+	UTR3
CAediting_1381238	chr19_52367227_+	UTR3
CAediting_1381239	chr19_52367228_+	UTR3
CAediting_1381240	chr19_52367241_+	UTR3
CAediting_1381241	chr19_52367263_+	UTR3
CAediting_1381242	chr19_52367290_+	UTR3
CAediting_1381243	chr19_52367291_+	UTR3
CAediting_1381244	chr19_52367334_+	UTR3
CAediting_1381245	chr19_52367345_+	UTR3
CAediting_1381246	chr19_52367346_+	UTR3
CAediting_1381247	chr19_52367347_+	UTR3
CAediting_1381248	chr19_52367364_+	UTR3
CAediting_1381249	chr19_52367368_+	UTR3
CAediting_1381250	chr19_52367386_+	UTR3
CAediting_1381251	chr19_52367387_+	UTR3
CAediting_1381252	chr19_52367408_+	UTR3

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1381213	chr19_52346829_+	SINE	Alu	AluSc
CAediting_1381214	chr19_52346830_+	SINE	Alu	AluSc
CAediting_1381215	chr19_52347711_+	SINE	Alu	AluJo
CAediting_1381216	chr19_52347733_+	SINE	Alu	AluJo
CAediting_1381217	chr19_52347745_+	SINE	Alu	AluJo
CAediting_1381218	chr19_52347797_+	SINE	Alu	AluJo
CAediting_1381219	chr19_52350957_+	SINE	Alu	AluSp
CAediting_1381220	chr19_52357329_+	SINE	Alu	AluJo
CAediting_1381221	chr19_52357468_+	SINE	Alu	AluY
CAediting_1381222	chr19_52357493_+	SINE	Alu	AluY
CAediting_1381223	chr19_52357494_+	SINE	Alu	AluY
CAediting_1381224	chr19_52357498_+	SINE	Alu	AluY
CAediting_1381225	chr19_52357524_+	SINE	Alu	AluY
CAediting_1381226	chr19_52357696_+	SINE	Alu	AluJo
CAediting_1381229	chr19_52367179_+	SINE	Alu	AluSz
CAediting_1381230	chr19_52367185_+	SINE	Alu	AluSz
CAediting_1381231	chr19_52367188_+	SINE	Alu	AluSz
CAediting_1381232	chr19_52367198_+	SINE	Alu	AluSz
CAediting_1381233	chr19_52367203_+	SINE	Alu	AluSz
CAediting_1381234	chr19_52367204_+	SINE	Alu	AluSz
CAediting_1381235	chr19_52367219_+	SINE	Alu	AluSz
CAediting_1381236	chr19_52367223_+	SINE	Alu	AluSz
CAediting_1381237	chr19_52367224_+	SINE	Alu	AluSz
CAediting_1381238	chr19_52367227_+	SINE	Alu	AluSz
CAediting_1381239	chr19_52367228_+	SINE	Alu	AluSz
CAediting_1381240	chr19_52367241_+	SINE	Alu	AluSz
CAediting_1381241	chr19_52367263_+	SINE	Alu	AluSz
CAediting_1381242	chr19_52367290_+	SINE	Alu	AluSz
CAediting_1381243	chr19_52367291_+	SINE	Alu	AluSz
CAediting_1381244	chr19_52367334_+	SINE	Alu	AluSz
CAediting_1381245	chr19_52367345_+	SINE	Alu	AluSz
CAediting_1381246	chr19_52367346_+	SINE	Alu	AluSz
CAediting_1381247	chr19_52367347_+	SINE	Alu	AluSz
CAediting_1381248	chr19_52367364_+	SINE	Alu	AluSz
CAediting_1381249	chr19_52367368_+	SINE	Alu	AluSz
CAediting_1381250	chr19_52367386_+	SINE	Alu	AluSz
CAediting_1381251	chr19_52367387_+	SINE	Alu	AluSz
CAediting_1381252	chr19_52367408_+	SINE	Alu	AluSz

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RNA A-to-I editing events in the alternative splicing sites for ZNF610

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000167554.13.ZNF610.

Correlation between RNA A-to-I editing and PSI for ENSG00000167554.13.ZNF610.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for ZNF610

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for ZNF610

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for ZNF610

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1381231	chr19_52367188_+	ENSG00000167554.13	ENST00000601151	hsa-miR-548ao-3p	52367186	52367191	6mer	52367172	52367192	146.00	-20.80
CAediting_1381231	chr19_52367188_+	ENSG00000167554.13	ENST00000601151	hsa-miR-591	52367183	52367189	7mer-m8	52367171	52367190	143.00	-18.78
CAediting_1381231	chr19_52367188_+	ENSG00000167554.13	ENST00000601151	hsa-miR-6502-3p	52367184	52367190	7mer-m8	52367171	52367191	147.00	-13.39
CAediting_1381231	chr19_52367188_+	ENSG00000167554.13	ENST00000601151	hsa-miR-6872-3p	52367181	52367187	7mer-m8	52367169	52367188	148.00	-20.99
CAediting_1381237	chr19_52367224_+	ENSG00000167554.13	ENST00000601151	hsa-miR-3140-5p	52367218	52367224	7mer-m8	52367205	52367225	141.00	-12.39
CAediting_1381237	chr19_52367224_+	ENSG00000167554.13	ENST00000601151	hsa-miR-5187-3p	52367217	52367223	7mer-m8	52367204	52367224	145.00	-11.49
CAediting_1381242	chr19_52367290_+	ENSG00000167554.13	ENST00000601151	hsa-miR-34a-3p	52367286	52367292	7mer-m8	52367270	52367293	146.00	-10.69
CAediting_1381244	chr19_52367334_+	ENSG00000167554.13	ENST00000601151	hsa-miR-1538	52367331	52367337	7mer-m8	52367316	52367338	147.00	-23.61
CAediting_1381244	chr19_52367334_+	ENSG00000167554.13	ENST00000601151	hsa-miR-4745-3p	52367331	52367337	7mer-m8	52367315	52367338	152.00	-27.23
CAediting_1381246	chr19_52367346_+	ENSG00000167554.13	ENST00000601151	hsa-miR-4294	52367344	52367350	7mer-m8	52367335	52367351	147.00	-18.02
CAediting_1381247	chr19_52367347_+	ENSG00000167554.13	ENST00000601151	hsa-miR-28-5p	52367345	52367351	7mer-m8	52367331	52367352	143.00	-14.84
CAediting_1381247	chr19_52367347_+	ENSG00000167554.13	ENST00000601151	hsa-miR-3139	52367345	52367351	7mer-m8	52367330	52367352	157.00	-22.48
CAediting_1381247	chr19_52367347_+	ENSG00000167554.13	ENST00000601151	hsa-miR-708-5p	52367345	52367351	7mer-m8	52367330	52367352	161.00	-22.72
CAediting_1381251	chr19_52367387_+	ENSG00000167554.13	ENST00000601151	hsa-miR-3189-3p	52367381	52367387	7mer-m8	52367369	52367388	141.00	-18.94
CAediting_1381251	chr19_52367387_+	ENSG00000167554.13	ENST00000601151	hsa-miR-6813-3p	52367382	52367388	7mer-m8	52367369	52367389	140.00	-15.09
CAediting_1381252	chr19_52367408_+	ENSG00000167554.13	ENST00000601151	hsa-miR-663b	52367406	52367413	8mer-1a	52367392	52367413	143.00	-22.63
CAediting_1381230	chr19_52367185_+	ENSG00000167554.13	ENST00000601151	hsa-miR-122-3p	52367180	52367185	6mer	52367166	52367186	140.00	-15.68
CAediting_1381234	chr19_52367204_+	ENSG00000167554.13	ENST00000601151	hsa-miR-17-3p	52367197	52367203	7mer-m8	52367184	52367204	153.00	-17.56
CAediting_1381234	chr19_52367204_+	ENSG00000167554.13	ENST00000601151	hsa-miR-3929	52367201	52367206	6mer	52367183	52367207	140.00	-25.35
CAediting_1381234	chr19_52367204_+	ENSG00000167554.13	ENST00000601151	hsa-miR-485-5p	52367201	52367207	7mer-m8	52367188	52367208	153.00	-17.86
CAediting_1381234	chr19_52367204_+	ENSG00000167554.13	ENST00000601151	hsa-miR-6884-5p	52367201	52367207	7mer-m8	52367186	52367208	146.00	-20.16
CAediting_1381239	chr19_52367228_+	ENSG00000167554.13	ENST00000601151	hsa-miR-146a-5p	52367226	52367232	7mer-m8	52367211	52367233	149.00	-19.98
CAediting_1381239	chr19_52367228_+	ENSG00000167554.13	ENST00000601151	hsa-miR-146b-5p	52367226	52367232	7mer-m8	52367207	52367233	152.00	-18.25
CAediting_1381239	chr19_52367228_+	ENSG00000167554.13	ENST00000601151	hsa-miR-7153-5p	52367226	52367232	7mer-m8	52367210	52367233	152.00	-20.93
CAediting_1381243	chr19_52367291_+	ENSG00000167554.13	ENST00000601151	hsa-miR-548ae-3p	52367289	52367295	7mer-m8	52367276	52367296	141.00	-10.65
CAediting_1381243	chr19_52367291_+	ENSG00000167554.13	ENST00000601151	hsa-miR-548ae-3p	52367289	52367295	7mer-m8	52367276	52367296	141.00	-10.65
CAediting_1381243	chr19_52367291_+	ENSG00000167554.13	ENST00000601151	hsa-miR-548ah-3p	52367289	52367295	7mer-m8	52367274	52367296	143.00	-12.84
CAediting_1381243	chr19_52367291_+	ENSG00000167554.13	ENST00000601151	hsa-miR-548aj-3p	52367289	52367295	7mer-m8	52367276	52367296	141.00	-8.54
CAediting_1381243	chr19_52367291_+	ENSG00000167554.13	ENST00000601151	hsa-miR-548aj-3p	52367289	52367295	7mer-m8	52367276	52367296	141.00	-8.54
CAediting_1381243	chr19_52367291_+	ENSG00000167554.13	ENST00000601151	hsa-miR-548am-3p	52367289	52367295	7mer-m8	52367274	52367296	143.00	-12.84
CAediting_1381243	chr19_52367291_+	ENSG00000167554.13	ENST00000601151	hsa-miR-548aq-3p	52367289	52367295	7mer-m8	52367275	52367296	141.00	-10.65
CAediting_1381243	chr19_52367291_+	ENSG00000167554.13	ENST00000601151	hsa-miR-548j-3p	52367289	52367295	7mer-m8	52367276	52367296	141.00	-10.65
CAediting_1381243	chr19_52367291_+	ENSG00000167554.13	ENST00000601151	hsa-miR-548x-3p	52367289	52367295	7mer-m8	52367277	52367296	141.00	-8.54
CAediting_1381243	chr19_52367291_+	ENSG00000167554.13	ENST00000601151	hsa-miR-548x-3p	52367289	52367295	7mer-m8	52367277	52367296	141.00	-8.54
CAediting_1381243	chr19_52367291_+	ENSG00000167554.13	ENST00000601151	hsa-miR-7844-5p	52367287	52367293	7mer-m8	52367275	52367294	153.00	-14.29
CAediting_1381248	chr19_52367364_+	ENSG00000167554.13	ENST00000601151	hsa-miR-1255b-2-3p	52367358	52367364	7mer-m8	52367344	52367365	140.00	-8.70
CAediting_1381248	chr19_52367364_+	ENSG00000167554.13	ENST00000601151	hsa-miR-4776-5p	52367361	52367367	7mer-m8	52367345	52367368	151.00	-24.89
CAediting_1381248	chr19_52367364_+	ENSG00000167554.13	ENST00000601151	hsa-miR-4776-5p	52367361	52367367	7mer-m8	52367345	52367368	151.00	-24.89
CAediting_1381248	chr19_52367364_+	ENSG00000167554.13	ENST00000601151	hsa-miR-4800-5p	52367362	52367368	7mer-m8	52367344	52367369	147.00	-26.51
CAediting_1381250	chr19_52367386_+	ENSG00000167554.13	ENST00000601151	hsa-miR-326	52367381	52367387	7mer-m8	52367369	52367388	140.00	-17.54
CAediting_1381250	chr19_52367386_+	ENSG00000167554.13	ENST00000601151	hsa-miR-330-5p	52367381	52367387	7mer-m8	52367367	52367388	140.00	-23.20
CAediting_1381250	chr19_52367386_+	ENSG00000167554.13	ENST00000601151	hsa-miR-4314	52367380	52367386	7mer-m8	52367370	52367387	140.00	-18.79
CAediting_1381250	chr19_52367386_+	ENSG00000167554.13	ENST00000601151	hsa-miR-514a-5p	52367382	52367388	7mer-m8	52367369	52367389	154.00	-20.19
CAediting_1381250	chr19_52367386_+	ENSG00000167554.13	ENST00000601151	hsa-miR-514a-5p	52367382	52367388	7mer-m8	52367369	52367389	154.00	-20.19
CAediting_1381250	chr19_52367386_+	ENSG00000167554.13	ENST00000601151	hsa-miR-514a-5p	52367382	52367388	7mer-m8	52367369	52367389	154.00	-20.19
CAediting_1381235	chr19_52367219_+	ENSG00000167554.13	ENST00000601151	hsa-miR-1247-3p	52367212	52367218	7mer-m8	52367197	52367219	154.00	-26.98

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1381244	chr19_52367334_+	ENSG00000167554.13	ENST00000601151	hsa-miR-1234-3p	52367332	52367338	7mer-m8	52367318	52367339	154	-20.76
CAediting_1381238	chr19_52367227_+	ENSG00000167554.13	ENST00000601151	hsa-miR-219b-3p	52367224	52367230	7mer-m8	52367211	52367231	148	-13.87
CAediting_1381239	chr19_52367228_+	ENSG00000167554.13	ENST00000601151	hsa-miR-219b-3p	52367224	52367230	7mer-m8	52367211	52367231	148	-13.87
CAediting_1381238	chr19_52367227_+	ENSG00000167554.13	ENST00000601151	hsa-miR-302f	52367223	52367229	7mer-m8	52367214	52367230	149	-7.49
CAediting_1381239	chr19_52367228_+	ENSG00000167554.13	ENST00000601151	hsa-miR-302f	52367223	52367229	7mer-m8	52367214	52367230	149	-7.49
CAediting_1381232	chr19_52367198_+	ENSG00000167554.13	ENST00000601151	hsa-miR-3174	52367194	52367199	6mer	52367180	52367200	142	-21.71
CAediting_1381244	chr19_52367334_+	ENSG00000167554.13	ENST00000601151	hsa-miR-3190-5p	52367328	52367334	7mer-m8	52367316	52367335	146	-17.71
CAediting_1381229	chr19_52367179_+	ENSG00000167554.13	ENST00000601151	hsa-miR-324-3p	52367176	52367182	7mer-m8	52367161	52367183	148	-24.16
CAediting_1381249	chr19_52367368_+	ENSG00000167554.13	ENST00000601151	hsa-miR-3681-5p	52367363	52367369	7mer-m8	52367349	52367370	143	-15.28
CAediting_1381233	chr19_52367203_+	ENSG00000167554.13	ENST00000601151	hsa-miR-377-5p	52367201	52367207	7mer-m8	52367187	52367208	155	-17.55
CAediting_1381234	chr19_52367204_+	ENSG00000167554.13	ENST00000601151	hsa-miR-377-5p	52367201	52367207	7mer-m8	52367187	52367208	155	-17.55
CAediting_1381229	chr19_52367179_+	ENSG00000167554.13	ENST00000601151	hsa-miR-4252	52367177	52367184	8mer-1a	52367164	52367184	149	-22.82
CAediting_1381252	chr19_52367408_+	ENSG00000167554.13	ENST00000601151	hsa-miR-4284	52367404	52367411	8mer-1a	52367394	52367411	151	-19.56
CAediting_1381240	chr19_52367241_+	ENSG00000167554.13	ENST00000601151	hsa-miR-4478	52367238	52367244	7mer-m8	52367230	52367245	149	-25.05
CAediting_1381235	chr19_52367219_+	ENSG00000167554.13	ENST00000601151	hsa-miR-4497	52367212	52367218	7mer-m8	52367204	52367219	145	-20.95
CAediting_1381240	chr19_52367241_+	ENSG00000167554.13	ENST00000601151	hsa-miR-4649-3p	52367235	52367241	7mer-m8	52367222	52367242	140	-14.11
CAediting_1381229	chr19_52367179_+	ENSG00000167554.13	ENST00000601151	hsa-miR-4793-3p	52367173	52367179	7mer-m8	52367158	52367180	153	-19.2
CAediting_1381245	chr19_52367345_+	ENSG00000167554.13	ENST00000601151	hsa-miR-510-3p	52367339	52367346	8mer-1a	52367326	52367346	145	-12.31
CAediting_1381246	chr19_52367346_+	ENSG00000167554.13	ENST00000601151	hsa-miR-510-3p	52367339	52367346	8mer-1a	52367326	52367346	145	-12.31
CAediting_1381244	chr19_52367334_+	ENSG00000167554.13	ENST00000601151	hsa-miR-548s	52367327	52367333	7mer-m8	52367312	52367334	140	-16.33
CAediting_1381233	chr19_52367203_+	ENSG00000167554.13	ENST00000601151	hsa-miR-6086	52367201	52367207	7mer-m8	52367189	52367208	148	-21.93
CAediting_1381234	chr19_52367204_+	ENSG00000167554.13	ENST00000601151	hsa-miR-6086	52367201	52367207	7mer-m8	52367189	52367208	148	-21.93
CAediting_1381233	chr19_52367203_+	ENSG00000167554.13	ENST00000601151	hsa-miR-6516-5p	52367197	52367203	7mer-m8	52367181	52367204	145	-14.12
CAediting_1381234	chr19_52367204_+	ENSG00000167554.13	ENST00000601151	hsa-miR-6516-5p	52367197	52367203	7mer-m8	52367181	52367204	145	-14.12
CAediting_1381232	chr19_52367198_+	ENSG00000167554.13	ENST00000601151	hsa-miR-6807-5p	52367191	52367197	7mer-m8	52367177	52367198	148	-19.37
CAediting_1381249	chr19_52367368_+	ENSG00000167554.13	ENST00000601151	hsa-miR-6849-5p	52367363	52367369	7mer-m8	52367348	52367370	143	-18.72
CAediting_1381240	chr19_52367241_+	ENSG00000167554.13	ENST00000601151	hsa-miR-7160-5p	52367236	52367242	7mer-m8	52367223	52367243	147	-20.02
CAediting_1381250	chr19_52367386_+	ENSG00000167554.13	ENST00000601151	hsa-miR-887-5p	52367379	52367386	8mer-1a	52367364	52367386	148	-19.39

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1160181	chr17_7017644_-	ENSG00000167554.13	ENST00000321287	hsa-miR-195-3p	52366805	52366811	7mer-m8	52366791	52366812	155	-21.55
CAediting_1160181	chr17_7017644_-	ENSG00000167554.13	ENST00000601151	hsa-miR-195-3p	52366805	52366811	7mer-m8	52366791	52366812	155	-21.55
CAediting_1399425	chr20_1392958_-	ENSG00000167554.13	ENST00000601151	hsa-miR-6869-5p	52367161	52367166	6mer	52367146	52367167	147	-21.85
CAediting_396018	chr5_1062918_-	ENSG00000167554.13	ENST00000601151	hsa-miR-4635	52367354	52367360	7mer-m8	52367341	52367361	162	-21.04
CAediting_573001	chr7_92204086_-	ENSG00000167554.13	ENST00000601151	hsa-miR-1285-5p	52367575	52367582	8mer-1a	52367562	52367582	147	-14.44
CAediting_1160181	chr17_7017644_-	ENSG00000167554.13	ENST00000327920	hsa-miR-195-3p	52366805	52366811	7mer-m8	52366791	52366812	155	-21.55
CAediting_1160181	chr17_7017644_-	ENSG00000167554.13	ENST00000613461	hsa-miR-195-3p	52366805	52366811	7mer-m8	52366791	52366812	155	-21.55
CAediting_1160181	chr17_7017644_-	ENSG00000167554.13	ENST00000616431	hsa-miR-195-3p	52366805	52366811	7mer-m8	52366791	52366812	155	-21.55

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for ZNF610

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

Top

Relation with ADAR for ZNF610

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

Top

Relation with cancer stages for ZNF610

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

Top

Relation with survival for ZNF610

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

Top

RelatedDrugs for ZNF610

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

Top

RelatedDiseases for ZNF610

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene