Home

Download

Statistics

Examples

Help

Contact

Editing gene: ZNF836 (CAeditome ID:162962)

Gene summary for ZNF836

Gene summary

Gene information	Gene symbol	ZNF836
	Gene ID	162962
	Gene name	zinc finger protein 836
	Synonyms	-
	Cytomap	19q13.41
	Type of gene	protein-coding
	Description	zinc finger protein 836
	Modification date	20210518
	UniProtAcc	Q6ZNA1
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

Top

RNA A-to-I events for ZNF836

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000196267.11

RNA A-to-I editing events in Cancer.

CAediting_1380963(52154086, -), CAediting_1380964(52154088, -), CAediting_1380965(52154098, -), CAediting_1380966(52154103, -), CAediting_1380967(52154108, -), CAediting_1380968(52154116, -), CAediting_1380969(52154118, -), CAediting_1380970(52154119, -), CAediting_1380971(52154123, -), CAediting_1380972(52154127, -), CAediting_1380973(52154134, -), CAediting_1380974(52154136, -), CAediting_1380975(52154138, -), CAediting_1380976(52154140, -), CAediting_1380977(52154143, -), CAediting_1380978(52154147, -), CAediting_1380979(52154148, -), CAediting_1380980(52154153, -), CAediting_1380981(52154159, -), CAediting_1380982(52154165, -), CAediting_1380983(52154166, -), CAediting_1380984(52154179, -), CAediting_1380985(52154183, -), CAediting_1380986(52154188, -), CAediting_1380987(52154189, -), CAediting_1380988(52154197, -), CAediting_1380989(52154201, -), CAediting_1380990(52154207, -), CAediting_1380991(52154211, -), CAediting_1380992(52154215, -), CAediting_1380993(52154218, -), CAediting_1380994(52154221, -), CAediting_1380995(52154222, -), CAediting_1380996(52154224, -), CAediting_1380997(52154226, -), CAediting_1380998(52154227, -), CAediting_1380999(52154228, -), CAediting_1381000(52154229, -), CAediting_1381001(52154232, -), CAediting_1381002(52154242, -), CAediting_1381003(52154244, -), CAediting_1381004(52154245, -), CAediting_1381005(52154253, -), CAediting_1381006(52154263, -), CAediting_1381007(52154266, -), CAediting_1381008(52154267, -), CAediting_1381009(52154268, -), CAediting_1381010(52154269, -), CAediting_1381011(52154277, -), CAediting_1381012(52154287, -), CAediting_1381013(52154292, -), CAediting_1381014(52154296, -), CAediting_1381015(52154299, -), CAediting_1381016(52154306, -), CAediting_1381017(52154310, -), CAediting_1381018(52154317, -), CAediting_1381019(52154322, -), CAediting_1381020(52154323, -), CAediting_1381021(52154331, -), CAediting_1381022(52154341, -), CAediting_1381023(52154391, -), CAediting_1381024(52154404, -), CAediting_1381025(52154416, -), CAediting_1381026(52154417, -), CAediting_1381027(52154418, -), CAediting_1381028(52154439, -), CAediting_1381029(52154443, -), CAediting_1381030(52154447, -), CAediting_1381031(52154455, -), CAediting_1381032(52154479, -), CAediting_1381033(52154489, -), CAediting_1381034(52154491, -), CAediting_1381035(52154493, -), CAediting_1381036(52154496, -), CAediting_1381037(52154502, -), CAediting_1381038(52154510, -), CAediting_1381039(52154511, -), CAediting_1381040(52154521, -), CAediting_1381041(52154524, -), CAediting_1381042(52154527, -), CAediting_1381043(52154529, -), CAediting_1381044(52154537, -), CAediting_1381045(52154540, -), CAediting_1381046(52154547, -), CAediting_1381047(52154550, -), CAediting_1381048(52154573, -), CAediting_1381049(52154577, -), CAediting_1381050(52154578, -), CAediting_1381051(52154584, -), CAediting_1381052(52154597, -), CAediting_1381053(52154598, -), CAediting_1381054(52154603, -), CAediting_1381055(52154609, -), CAediting_1381056(52154613, -), CAediting_1381057(52154622, -), CAediting_1381058(52154626, -), CAediting_1381059(52154627, -), CAediting_1381060(52154634, -), CAediting_1381061(52154651, -), CAediting_1381062(52154655, -), CAediting_1381063(52154657, -), CAediting_1381064(52163607, -), CAediting_1381065(52164831, -), CAediting_1381066(52165081, -), CAediting_1381067(52169663, -), CAediting_1381068(52169670, -), CAediting_1381069(52169675, -), CAediting_1381070(52169731, -), CAediting_1381071(52169757, -), CAediting_1381072(52169762, -), CAediting_1381073(52169767, -),

Top

RNA editing positional annotations for ZNF836 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1380963	chr19_52154086_-	ncRNA_intronic
CAediting_1380964	chr19_52154088_-	ncRNA_intronic
CAediting_1380965	chr19_52154098_-	ncRNA_intronic
CAediting_1380966	chr19_52154103_-	ncRNA_intronic
CAediting_1380967	chr19_52154108_-	ncRNA_intronic
CAediting_1380968	chr19_52154116_-	ncRNA_intronic
CAediting_1380969	chr19_52154118_-	ncRNA_intronic
CAediting_1380970	chr19_52154119_-	ncRNA_intronic
CAediting_1380971	chr19_52154123_-	ncRNA_intronic
CAediting_1380972	chr19_52154127_-	ncRNA_intronic
CAediting_1380973	chr19_52154134_-	splicing
CAediting_1380974	chr19_52154136_-	ncRNA_intronic
CAediting_1380975	chr19_52154138_-	ncRNA_intronic
CAediting_1380976	chr19_52154140_-	ncRNA_intronic
CAediting_1380977	chr19_52154143_-	ncRNA_intronic
CAediting_1380978	chr19_52154147_-	ncRNA_intronic
CAediting_1380979	chr19_52154148_-	ncRNA_intronic
CAediting_1380980	chr19_52154153_-	ncRNA_intronic
CAediting_1380981	chr19_52154159_-	ncRNA_intronic
CAediting_1380982	chr19_52154165_-	ncRNA_intronic
CAediting_1380983	chr19_52154166_-	ncRNA_intronic
CAediting_1380984	chr19_52154179_-	ncRNA_intronic
CAediting_1380985	chr19_52154183_-	ncRNA_intronic
CAediting_1380986	chr19_52154188_-	ncRNA_intronic
CAediting_1380987	chr19_52154189_-	ncRNA_intronic
CAediting_1380988	chr19_52154197_-	ncRNA_intronic
CAediting_1380989	chr19_52154201_-	ncRNA_intronic
CAediting_1380990	chr19_52154207_-	ncRNA_intronic
CAediting_1380991	chr19_52154211_-	ncRNA_intronic
CAediting_1380992	chr19_52154215_-	ncRNA_intronic
CAediting_1380993	chr19_52154218_-	ncRNA_intronic
CAediting_1380994	chr19_52154221_-	ncRNA_intronic
CAediting_1380995	chr19_52154222_-	ncRNA_intronic
CAediting_1380996	chr19_52154224_-	ncRNA_intronic
CAediting_1380997	chr19_52154226_-	ncRNA_intronic
CAediting_1380998	chr19_52154227_-	ncRNA_intronic
CAediting_1380999	chr19_52154228_-	ncRNA_intronic
CAediting_1381000	chr19_52154229_-	ncRNA_intronic
CAediting_1381001	chr19_52154232_-	ncRNA_intronic
CAediting_1381002	chr19_52154242_-	ncRNA_intronic
CAediting_1381003	chr19_52154244_-	ncRNA_intronic
CAediting_1381004	chr19_52154245_-	ncRNA_intronic
CAediting_1381005	chr19_52154253_-	ncRNA_intronic
CAediting_1381006	chr19_52154263_-	ncRNA_intronic
CAediting_1381007	chr19_52154266_-	ncRNA_intronic
CAediting_1381008	chr19_52154267_-	ncRNA_intronic
CAediting_1381009	chr19_52154268_-	ncRNA_intronic
CAediting_1381010	chr19_52154269_-	ncRNA_intronic
CAediting_1381011	chr19_52154277_-	ncRNA_intronic
CAediting_1381012	chr19_52154287_-	ncRNA_intronic
CAediting_1381013	chr19_52154292_-	ncRNA_intronic
CAediting_1381014	chr19_52154296_-	ncRNA_intronic
CAediting_1381015	chr19_52154299_-	ncRNA_intronic
CAediting_1381016	chr19_52154306_-	ncRNA_intronic
CAediting_1381017	chr19_52154310_-	ncRNA_intronic
CAediting_1381018	chr19_52154317_-	ncRNA_intronic
CAediting_1381019	chr19_52154322_-	ncRNA_intronic
CAediting_1381020	chr19_52154323_-	ncRNA_intronic
CAediting_1381021	chr19_52154331_-	ncRNA_intronic
CAediting_1381022	chr19_52154341_-	ncRNA_intronic
CAediting_1381023	chr19_52154391_-	ncRNA_intronic
CAediting_1381024	chr19_52154404_-	ncRNA_intronic
CAediting_1381025	chr19_52154416_-	ncRNA_intronic
CAediting_1381026	chr19_52154417_-	ncRNA_intronic
CAediting_1381027	chr19_52154418_-	ncRNA_intronic
CAediting_1381028	chr19_52154439_-	ncRNA_intronic
CAediting_1381029	chr19_52154443_-	ncRNA_intronic
CAediting_1381030	chr19_52154447_-	ncRNA_intronic
CAediting_1381031	chr19_52154455_-	ncRNA_intronic
CAediting_1381032	chr19_52154479_-	ncRNA_intronic
CAediting_1381033	chr19_52154489_-	ncRNA_intronic
CAediting_1381034	chr19_52154491_-	ncRNA_intronic
CAediting_1381035	chr19_52154493_-	ncRNA_intronic
CAediting_1381036	chr19_52154496_-	ncRNA_intronic
CAediting_1381037	chr19_52154502_-	ncRNA_intronic
CAediting_1381038	chr19_52154510_-	ncRNA_intronic
CAediting_1381039	chr19_52154511_-	ncRNA_intronic
CAediting_1381040	chr19_52154521_-	ncRNA_intronic
CAediting_1381041	chr19_52154524_-	ncRNA_intronic
CAediting_1381042	chr19_52154527_-	ncRNA_intronic
CAediting_1381043	chr19_52154529_-	ncRNA_intronic
CAediting_1381044	chr19_52154537_-	ncRNA_intronic
CAediting_1381045	chr19_52154540_-	ncRNA_intronic
CAediting_1381046	chr19_52154547_-	ncRNA_intronic
CAediting_1381047	chr19_52154550_-	ncRNA_intronic
CAediting_1381048	chr19_52154573_-	ncRNA_intronic
CAediting_1381049	chr19_52154577_-	ncRNA_intronic
CAediting_1381050	chr19_52154578_-	ncRNA_intronic
CAediting_1381051	chr19_52154584_-	ncRNA_intronic
CAediting_1381052	chr19_52154597_-	ncRNA_intronic
CAediting_1381053	chr19_52154598_-	ncRNA_intronic
CAediting_1381054	chr19_52154603_-	ncRNA_intronic
CAediting_1381055	chr19_52154609_-	ncRNA_intronic
CAediting_1381056	chr19_52154613_-	ncRNA_intronic
CAediting_1381057	chr19_52154622_-	ncRNA_intronic
CAediting_1381058	chr19_52154626_-	ncRNA_intronic
CAediting_1381059	chr19_52154627_-	ncRNA_intronic
CAediting_1381060	chr19_52154634_-	ncRNA_intronic
CAediting_1381061	chr19_52154651_-	ncRNA_intronic
CAediting_1381062	chr19_52154655_-	ncRNA_intronic
CAediting_1381063	chr19_52154657_-	ncRNA_intronic
CAediting_1381064	chr19_52163607_-	ncRNA_intronic
CAediting_1381065	chr19_52164831_-	ncRNA_intronic
CAediting_1381066	chr19_52165081_-	ncRNA_intronic
CAediting_1381067	chr19_52169663_-	ncRNA_exonic
CAediting_1381068	chr19_52169670_-	ncRNA_exonic
CAediting_1381069	chr19_52169675_-	ncRNA_exonic
CAediting_1381070	chr19_52169731_-	ncRNA_exonic
CAediting_1381071	chr19_52169757_-	ncRNA_exonic
CAediting_1381072	chr19_52169762_-	ncRNA_exonic
CAediting_1381073	chr19_52169767_-	ncRNA_exonic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1380963	chr19_52154086_-	SINE	Alu	AluSz6
CAediting_1380964	chr19_52154088_-	SINE	Alu	AluSz6
CAediting_1380965	chr19_52154098_-	SINE	Alu	AluSz6
CAediting_1380966	chr19_52154103_-	SINE	Alu	AluSz6
CAediting_1380967	chr19_52154108_-	SINE	Alu	AluSz6
CAediting_1380968	chr19_52154116_-	SINE	Alu	AluSz6
CAediting_1380969	chr19_52154118_-	SINE	Alu	AluSz6
CAediting_1380970	chr19_52154119_-	SINE	Alu	AluSz6
CAediting_1380971	chr19_52154123_-	SINE	Alu	AluSz6
CAediting_1380972	chr19_52154127_-	SINE	Alu	AluSz6
CAediting_1380973	chr19_52154134_-	SINE	Alu	AluSz6
CAediting_1380974	chr19_52154136_-	SINE	Alu	AluSz6
CAediting_1380975	chr19_52154138_-	SINE	Alu	AluSz6
CAediting_1380976	chr19_52154140_-	SINE	Alu	AluSz6
CAediting_1380977	chr19_52154143_-	SINE	Alu	AluSz6
CAediting_1380978	chr19_52154147_-	SINE	Alu	AluSz6
CAediting_1380979	chr19_52154148_-	SINE	Alu	AluSz6
CAediting_1380980	chr19_52154153_-	SINE	Alu	AluSz6
CAediting_1380981	chr19_52154159_-	SINE	Alu	AluSz6
CAediting_1380982	chr19_52154165_-	SINE	Alu	AluSz6
CAediting_1380983	chr19_52154166_-	SINE	Alu	AluSz6
CAediting_1380984	chr19_52154179_-	SINE	Alu	AluSz6
CAediting_1380985	chr19_52154183_-	SINE	Alu	AluSz6
CAediting_1380986	chr19_52154188_-	SINE	Alu	AluSz6
CAediting_1380987	chr19_52154189_-	SINE	Alu	AluSz6
CAediting_1380988	chr19_52154197_-	SINE	Alu	AluSz6
CAediting_1380989	chr19_52154201_-	SINE	Alu	AluSz6
CAediting_1380990	chr19_52154207_-	SINE	Alu	AluSz6
CAediting_1380991	chr19_52154211_-	SINE	Alu	AluSz6
CAediting_1380992	chr19_52154215_-	SINE	Alu	AluSz6
CAediting_1380993	chr19_52154218_-	SINE	Alu	AluSz6
CAediting_1380994	chr19_52154221_-	SINE	Alu	AluSz6
CAediting_1380995	chr19_52154222_-	SINE	Alu	AluSz6
CAediting_1380996	chr19_52154224_-	SINE	Alu	AluSz6
CAediting_1380997	chr19_52154226_-	SINE	Alu	AluSz6
CAediting_1380998	chr19_52154227_-	SINE	Alu	AluSz6
CAediting_1380999	chr19_52154228_-	SINE	Alu	AluSz6
CAediting_1381000	chr19_52154229_-	SINE	Alu	AluSz6
CAediting_1381001	chr19_52154232_-	SINE	Alu	AluSz6
CAediting_1381002	chr19_52154242_-	SINE	Alu	AluSz6
CAediting_1381003	chr19_52154244_-	SINE	Alu	AluSz6
CAediting_1381004	chr19_52154245_-	SINE	Alu	AluSz6
CAediting_1381005	chr19_52154253_-	SINE	Alu	AluSz6
CAediting_1381006	chr19_52154263_-	SINE	Alu	AluSz6
CAediting_1381007	chr19_52154266_-	SINE	Alu	AluSz6
CAediting_1381008	chr19_52154267_-	SINE	Alu	AluSz6
CAediting_1381009	chr19_52154268_-	SINE	Alu	AluSz6
CAediting_1381010	chr19_52154269_-	SINE	Alu	AluSz6
CAediting_1381011	chr19_52154277_-	SINE	Alu	AluSz6
CAediting_1381012	chr19_52154287_-	SINE	Alu	AluSz6
CAediting_1381013	chr19_52154292_-	SINE	Alu	AluSz6
CAediting_1381014	chr19_52154296_-	SINE	Alu	AluSz6
CAediting_1381015	chr19_52154299_-	SINE	Alu	AluSz6
CAediting_1381016	chr19_52154306_-	SINE	Alu	AluSz6
CAediting_1381017	chr19_52154310_-	SINE	Alu	AluSz6
CAediting_1381018	chr19_52154317_-	SINE	Alu	AluSz6
CAediting_1381019	chr19_52154322_-	SINE	Alu	AluSz6
CAediting_1381020	chr19_52154323_-	SINE	Alu	AluSz6
CAediting_1381021	chr19_52154331_-	SINE	Alu	AluSz6
CAediting_1381022	chr19_52154341_-	SINE	Alu	AluSz6
CAediting_1381023	chr19_52154391_-	SINE	Alu	AluSc
CAediting_1381024	chr19_52154404_-	SINE	Alu	AluSc
CAediting_1381025	chr19_52154416_-	SINE	Alu	AluSc
CAediting_1381026	chr19_52154417_-	SINE	Alu	AluSc
CAediting_1381027	chr19_52154418_-	SINE	Alu	AluSc
CAediting_1381028	chr19_52154439_-	SINE	Alu	AluSc
CAediting_1381029	chr19_52154443_-	SINE	Alu	AluSc
CAediting_1381030	chr19_52154447_-	SINE	Alu	AluSc
CAediting_1381031	chr19_52154455_-	SINE	Alu	AluSc
CAediting_1381032	chr19_52154479_-	SINE	Alu	AluSc
CAediting_1381033	chr19_52154489_-	SINE	Alu	AluSc
CAediting_1381034	chr19_52154491_-	SINE	Alu	AluSc
CAediting_1381035	chr19_52154493_-	SINE	Alu	AluSc
CAediting_1381036	chr19_52154496_-	SINE	Alu	AluSc
CAediting_1381037	chr19_52154502_-	SINE	Alu	AluSc
CAediting_1381038	chr19_52154510_-	SINE	Alu	AluSc
CAediting_1381039	chr19_52154511_-	SINE	Alu	AluSc
CAediting_1381040	chr19_52154521_-	SINE	Alu	AluSc
CAediting_1381041	chr19_52154524_-	SINE	Alu	AluSc
CAediting_1381042	chr19_52154527_-	SINE	Alu	AluSc
CAediting_1381043	chr19_52154529_-	SINE	Alu	AluSc
CAediting_1381044	chr19_52154537_-	SINE	Alu	AluSc
CAediting_1381045	chr19_52154540_-	SINE	Alu	AluSc
CAediting_1381046	chr19_52154547_-	SINE	Alu	AluSc
CAediting_1381047	chr19_52154550_-	SINE	Alu	AluSc
CAediting_1381048	chr19_52154573_-	SINE	Alu	AluSc
CAediting_1381049	chr19_52154577_-	SINE	Alu	AluSc
CAediting_1381050	chr19_52154578_-	SINE	Alu	AluSc
CAediting_1381051	chr19_52154584_-	SINE	Alu	AluSc
CAediting_1381052	chr19_52154597_-	SINE	Alu	AluSc
CAediting_1381053	chr19_52154598_-	SINE	Alu	AluSc
CAediting_1381054	chr19_52154603_-	SINE	Alu	AluSc
CAediting_1381055	chr19_52154609_-	SINE	Alu	AluSc
CAediting_1381056	chr19_52154613_-	SINE	Alu	AluSc
CAediting_1381057	chr19_52154622_-	SINE	Alu	AluSc
CAediting_1381058	chr19_52154626_-	SINE	Alu	AluSc
CAediting_1381059	chr19_52154627_-	SINE	Alu	AluSc
CAediting_1381060	chr19_52154634_-	SINE	Alu	AluSc
CAediting_1381061	chr19_52154651_-	SINE	Alu	AluSc
CAediting_1381062	chr19_52154655_-	SINE	Alu	AluSc
CAediting_1381063	chr19_52154657_-	SINE	Alu	AluSc
CAediting_1381064	chr19_52163607_-	SINE	Alu	AluSc
CAediting_1381065	chr19_52164831_-	SINE	Alu	AluSz
CAediting_1381066	chr19_52165081_-	SINE	Alu	AluSz
CAediting_1381067	chr19_52169663_-	SINE	Alu	AluJb
CAediting_1381068	chr19_52169670_-	SINE	Alu	AluJb
CAediting_1381069	chr19_52169675_-	SINE	Alu	AluJb
CAediting_1381070	chr19_52169731_-	SINE	Alu	AluJb
CAediting_1381071	chr19_52169757_-	SINE	Alu	AluJb
CAediting_1381072	chr19_52169762_-	SINE	Alu	AluJb
CAediting_1381073	chr19_52169767_-	SINE	Alu	AluJb

Top

RNA A-to-I editing events in the alternative splicing sites for ZNF836

RNA A-to-I editing(s) in the alternative splicing sites.

AStype	CAeditomID	Editing position	AS position	AS direction	Exonic location	Wildtype sequence	Wildtype splicing strength	RNA edited sequence	RNA edited splicing strength
IR	CAediting_1380973	chr19_52154134_-	52154130:52154152	3SS	0+2i	CTTGAACCCAGGAGACAGAGGTT	-27.61	CTTGAACCCAGGAGACAGGGGTT	-35.56
IR	CAediting_1380974	chr19_52154136_-	52154130:52154152	3SS	0+4i	CTTGAACCCAGGAGACAGAGGTT	-27.61	CTTGAACCCAGGAGACGGAGGTT	-28.01
IR	CAediting_1380975	chr19_52154138_-	52154130:52154152	3SS	0+6i	CTTGAACCCAGGAGACAGAGGTT	-27.61	CTTGAACCCAGGAGGCAGAGGTT	-24.52
IR	CAediting_1380976	chr19_52154140_-	52154130:52154152	3SS	0+8i	CTTGAACCCAGGAGACAGAGGTT	-27.61	CTTGAACCCAGGGGACAGAGGTT	-21.23
IR	CAediting_1380977	chr19_52154143_-	52154130:52154152	3SS	0+11i	CTTGAACCCAGGAGACAGAGGTT	-27.61	CTTGAACCCGGGAGACAGAGGTT	-22.03
IR	CAediting_1380978	chr19_52154147_-	52154130:52154152	3SS	0+15i	CTTGAACCCAGGAGACAGAGGTT	-27.61	CTTGAGCCCAGGAGACAGAGGTT	-28.22
IR	CAediting_1380979	chr19_52154148_-	52154130:52154152	3SS	0+16i	CTTGAACCCAGGAGACAGAGGTT	-27.61	CTTGGACCCAGGAGACAGAGGTT	-26.73
IR	CAediting_1381057	chr19_52154622_-	52154615:52154623	5SS	2+0i	CAGTGGCGT	-6.42	CGGTGGCGT	-8.24

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000196267.11.ZNF836.

Correlation between RNA A-to-I editing and PSI for ENSG00000196267.11.ZNF836.

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for ZNF836

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

Top

Protein coding region RNA A-to-I editings for ZNF836

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

Top

The effects of the RNA editing to the miRNA binding sites for ZNF836

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1381058	chr19_52154626_-	ENSG00000196267.11	ENST00000599618	hsa-miR-508-5p	52154625	52154631	7mer-m8	52154624	52154647	152.00	-23.91
CAediting_1381058	chr19_52154626_-	ENSG00000196267.11	ENST00000599618	hsa-miR-766-3p	52154626	52154632	7mer-m8	52154625	52154649	150.00	-22.39
CAediting_1381058	chr19_52154626_-	ENSG00000196267.11	ENST00000599618	hsa-miR-7703	52154622	52154628	7mer-m8	52154622	52154643	162.00	-25.66
CAediting_1380964	chr19_52154088_-	ENSG00000196267.11	ENST00000599618	hsa-miR-4715-3p	52154086	52154092	7mer-m8	52154085	52154107	154.00	-20.01
CAediting_1380964	chr19_52154088_-	ENSG00000196267.11	ENST00000599618	hsa-miR-6817-5p	52154085	52154090	6mer	52154084	52154105	143.00	-28.55
CAediting_1380965	chr19_52154098_-	ENSG00000196267.11	ENST00000599618	hsa-miR-4743-5p	52154095	52154101	7mer-m8	52154094	52154116	153.00	-23.74
CAediting_1380966	chr19_52154103_-	ENSG00000196267.11	ENST00000599618	hsa-miR-106b-3p	52154103	52154109	7mer-m8	52154102	52154125	150.00	-18.43
CAediting_1381059	chr19_52154627_-	ENSG00000196267.11	ENST00000599618	hsa-miR-324-5p	52154622	52154629	8mer-1a	52154622	52154645	143.00	-21.90
CAediting_1381059	chr19_52154627_-	ENSG00000196267.11	ENST00000599618	hsa-miR-7977	52154626	52154632	7mer-m8	52154625	52154642	145.00	-18.46
CAediting_1381060	chr19_52154634_-	ENSG00000196267.11	ENST00000599618	hsa-miR-3940-3p	52154630	52154636	7mer-m8	52154629	52154649	141.00	-23.25

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1381062	chr19_52154655_-	ENSG00000196267.11	ENST00000599618	hsa-miR-340-3p	52154651	52154658	8mer-1a	52154651	52154672	146	-18.48
CAediting_1381063	chr19_52154657_-	ENSG00000196267.11	ENST00000599618	hsa-miR-340-3p	52154651	52154658	8mer-1a	52154651	52154672	146	-18.48
CAediting_1381063	chr19_52154657_-	ENSG00000196267.11	ENST00000599618	hsa-miR-371b-5p	52154655	52154662	8mer-1a	52154655	52154674	152	-13.16
CAediting_1381063	chr19_52154657_-	ENSG00000196267.11	ENST00000599618	hsa-miR-373-5p	52154655	52154662	8mer-1a	52154655	52154676	145	-9.63
CAediting_1381062	chr19_52154655_-	ENSG00000196267.11	ENST00000599618	hsa-miR-514b-5p	52154655	52154660	6mer	52154654	52154677	147	-15.79
CAediting_1381063	chr19_52154657_-	ENSG00000196267.11	ENST00000599618	hsa-miR-514b-5p	52154655	52154660	6mer	52154654	52154677	147	-15.79
CAediting_1381063	chr19_52154657_-	ENSG00000196267.11	ENST00000599618	hsa-miR-616-5p	52154655	52154662	8mer-1a	52154655	52154676	140	-6.88
CAediting_1381059	chr19_52154627_-	ENSG00000196267.11	ENST00000599618	hsa-miR-6512-3p	52154626	52154633	8mer-1a	52154626	52154647	140	-19.51
CAediting_1381059	chr19_52154627_-	ENSG00000196267.11	ENST00000599618	hsa-miR-6720-5p	52154626	52154633	8mer-1a	52154626	52154646	150	-24.88
CAediting_1381062	chr19_52154655_-	ENSG00000196267.11	ENST00000599618	hsa-miR-6827-3p	52154651	52154658	8mer-1a	52154651	52154671	140	-14.67
CAediting_1381063	chr19_52154657_-	ENSG00000196267.11	ENST00000599618	hsa-miR-6827-3p	52154651	52154658	8mer-1a	52154651	52154671	140	-14.67
CAediting_1381060	chr19_52154634_-	ENSG00000196267.11	ENST00000599618	hsa-miR-8073	52154632	52154637	6mer	52154631	52154652	144	-25.99
CAediting_1380965	chr19_52154098_-	ENSG00000196267.11	ENST00000599618	hsa-miR-3135b	52154096	52154102	7mer-m8	52154095	52154112	151	-26.81
CAediting_1380965	chr19_52154098_-	ENSG00000196267.11	ENST00000599618	hsa-miR-3652	52154095	52154101	7mer-m8	52154094	52154110	148	-17.66
CAediting_1380967	chr19_52154108_-	ENSG00000196267.11	ENST00000599618	hsa-miR-4720-5p	52154107	52154112	6mer	52154106	52154129	140	-18.37
CAediting_1380963	chr19_52154086_-	ENSG00000196267.11	ENST00000599618	hsa-miR-6773-3p	52154085	52154091	7mer-m8	52154084	52154105	142	-15.62
CAediting_1380964	chr19_52154088_-	ENSG00000196267.11	ENST00000599618	hsa-miR-6773-3p	52154085	52154091	7mer-m8	52154084	52154105	142	-15.62
CAediting_1380964	chr19_52154088_-	ENSG00000196267.11	ENST00000599618	hsa-miR-6879-3p	52154086	52154093	8mer-1a	52154086	52154108	142	-18.64

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_846604	chr11_93733708_-	ENSG00000196267.11	ENST00000599618	hsa-miR-1304-3p	52154080	52154087	8mer-1a	52154080	52154101	156	-21.66
CAediting_980496	chr14_31014685_-	ENSG00000196267.11	ENST00000599618	hsa-miR-624-3p	52154074	52154080	7mer-m8	52154073	52154093	163	-21.17

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_573001	chr7_92204086_-	ENSG00000196267.11	ENST00000599618	hsa-miR-1285-5p	52154687	52154693	7mer-m8	52154686	52154706	141	-14.41

Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for ZNF836

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

Top

Relation with ADAR for ZNF836

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
BLCA	CAediting_1380977	chr19_52154143_-	1.40652930977818e-07	0.413866334157328	0.0294228224823733	0.177882012950985	.	.
BRCA	CAediting_1380977	chr19_52154143_-	9.89881864690608e-30	0.422419639995256	.	.	.	.
CESC	CAediting_1380977	chr19_52154143_-	0.00787576896204858	0.226978856178474	.	.	.	.
LUAD	CAediting_1380977	chr19_52154143_-	0.00480214249216988	0.287013242821818	.	.	.	.
COAD	CAediting_1380977	chr19_52154143_-	0.0176867182242008	0.302814000519583	.	.	.	.
LUSC	CAediting_1380977	chr19_52154143_-	0.00398491300543073	0.303987443818501	.	.	0.0153788741349394	0.25763481774077
PRAD	CAediting_1380977	chr19_52154143_-	0.00251143306404332	0.205570136498879	0.010872679637879	0.173784331065029	.	.
STAD	CAediting_1380977	chr19_52154143_-	6.14159125999764e-05	0.319129041137471	.	.	.	.
THCA	CAediting_1380977	chr19_52154143_-	0.00312308599420705	0.17357708209306	.	.	.	.
KIRC	CAediting_1380977	chr19_52154143_-	0.00459467198371915	0.182738254726588	.	.	.	.
UCEC	CAediting_1380977	chr19_52154143_-	1.13394557700783e-14	0.448564374756748	0.00202725112370416	0.187719048509661	.	.
KIRP	CAediting_1380977	chr19_52154143_-	.	.	0.00103623673637146	0.315694559835726	.	.
ACC	CAediting_1380977	chr19_52154143_-	1.08146192989971e-05	0.559712852844736	.	.	.	.
ESCA	CAediting_1380977	chr19_52154143_-	0.0070390841529998	0.262780154373425	.	.	.	.
OV	CAediting_1380977	chr19_52154143_-	8.40337710007794e-08	0.319579030054956	0.0109169825030359	0.154975379120465	.	.
SKCM	CAediting_1380977	chr19_52154143_-	.	.	0.0113201024699399	0.283590702743702	.	.
SARC	CAediting_1380977	chr19_52154143_-	0.0146337627830192	0.299300491760661	.	.	.	.
TGCT	CAediting_1380977	chr19_52154143_-	1.36047600347961e-08	0.619770772130269	.	.	.	.
THYM	CAediting_1380977	chr19_52154143_-	.	.	.	.	0.00482350388896152	0.316022186508546
STAD	CAediting_1380978	chr19_52154147_-	0.000672066824752265	0.452366297623615	.	.	.	.
UCEC	CAediting_1380978	chr19_52154147_-	0.0034070152530842	0.363512545190366	.	.	.	.
OV	CAediting_1380978	chr19_52154147_-	0.000318521466299169	0.343034714477172	.	.	.	.
BLCA	CAediting_1380982	chr19_52154165_-	0.000766808646617103	0.392906903112714	.	.	.	.
BRCA	CAediting_1380982	chr19_52154165_-	1.04414920301653e-11	0.375932510918014	.	.	.	.
STAD	CAediting_1380982	chr19_52154165_-	0.00036995358175185	0.311151609971102	.	.	.	.
THCA	CAediting_1380982	chr19_52154165_-	0.00506685008069857	0.26665055182308	.	.	.	.
UCEC	CAediting_1380982	chr19_52154165_-	0.00588612012838823	0.17407280490931	0.0389636498316703	0.130931897339868	.	.
OV	CAediting_1380982	chr19_52154165_-	1.22269233583429e-06	0.30842641391641	.	.	.	.
BRCA	CAediting_1380983	chr19_52154166_-	0.000148898297446146	0.361855479425317	.	.	.	.
OV	CAediting_1380983	chr19_52154166_-	0.0162554800062345	0.292637672303766	.	.	.	.
KIRC	CAediting_1380986	chr19_52154188_-	0.00501237911854094	0.314708345452412	.	.	.	.
UCEC	CAediting_1380986	chr19_52154188_-	1.19932870706899e-07	0.467712709195305	.	.	0.044136647013033	0.18725433457009
ESCA	CAediting_1380986	chr19_52154188_-	.	.	.	.	0.0144974996078323	0.309121897134745
OV	CAediting_1380986	chr19_52154188_-	0.008757534220133	0.198179478758842	.	.	.	.
BLCA	CAediting_1380992	chr19_52154215_-	0.00335076112812842	0.334541380917292	.	.	.	.
BRCA	CAediting_1380992	chr19_52154215_-	3.3675478585313e-07	0.302871502778318	.	.	.	.
UCEC	CAediting_1380992	chr19_52154215_-	0.000213737591458215	0.365633979488162	.	.	0.0266205941885376	0.223974899718178
OV	CAediting_1380992	chr19_52154215_-	0.0308383425799531	0.155887473646665	.	.	.	.
TGCT	CAediting_1380992	chr19_52154215_-	0.00695618008315532	0.33419411232248	.	.	.	.
BRCA	CAediting_1380996	chr19_52154224_-	0.000100890030783174	0.411474487851058	.	.	.	.
BLCA	CAediting_1380997	chr19_52154226_-	0.0194981057400702	0.282702071872371	.	.	.	.
BRCA	CAediting_1380997	chr19_52154226_-	2.05848595129391e-13	0.388617450162504	.	.	0.0203466984404332	0.127282431641404
PRAD	CAediting_1380997	chr19_52154226_-	2.76314898949585e-05	0.516971716987024	.	.	.	.
THCA	CAediting_1380997	chr19_52154226_-	8.95228369134841e-05	0.411966574206665	.	.	.	.
UCEC	CAediting_1380997	chr19_52154226_-	9.21195039130826e-05	0.368945158431624	.	.	.	.
OV	CAediting_1380997	chr19_52154226_-	0.00749913753319802	0.209363408986583	.	.	.	.
BRCA	CAediting_1380998	chr19_52154227_-	3.00050435073022e-05	0.300916192546166	.	.	.	.
KIRC	CAediting_1380998	chr19_52154227_-	.	.	.	.	0.0350675402514235	0.243772157247469
BLCA	CAediting_1380999	chr19_52154228_-	1.16551354910765e-14	0.481901865738026	.	.	.	.
LGG	CAediting_1380999	chr19_52154228_-	9.12494095315932e-06	0.409056103389778	.	.	.	.
BRCA	CAediting_1380999	chr19_52154228_-	5.89837496975078e-26	0.367852032275145	.	.	.	.
CESC	CAediting_1380999	chr19_52154228_-	1.9397536019944e-07	0.371419713143071	.	.	.	.
LUAD	CAediting_1380999	chr19_52154228_-	0.0180395306475792	0.209578738990568	.	.	.	.
LUSC	CAediting_1380999	chr19_52154228_-	7.44483333855632e-07	0.432133773364882	.	.	0.00422734490003446	0.258314152648573
GBM	CAediting_1380999	chr19_52154228_-	0.00169549332659761	0.31624679259997	.	.	.	.
PRAD	CAediting_1380999	chr19_52154228_-	4.22735586723605e-06	0.259089442471307	.	.	.	.
HNSC	CAediting_1380999	chr19_52154228_-	0.00210285906443579	0.252546229764257	.	.	.	.
STAD	CAediting_1380999	chr19_52154228_-	0.00272341717205128	0.231916227127878	.	.	.	.
THCA	CAediting_1380999	chr19_52154228_-	1.66698076386415e-07	0.276431706559093	.	.	.	.
KIRC	CAediting_1380999	chr19_52154228_-	0.021494573528217	0.133602922116792	.	.	.	.
UCEC	CAediting_1380999	chr19_52154228_-	1.13564075720747e-17	0.427234021731342	.	.	.	.
ACC	CAediting_1380999	chr19_52154228_-	9.40645629696102e-08	0.601206625496686	.	.	.	.
OV	CAediting_1380999	chr19_52154228_-	0.000572415571609034	0.203856045900835	.	.	.	.
PAAD	CAediting_1380999	chr19_52154228_-	0.000657826724442126	0.356244841501568	.	.	.	.
PCPG	CAediting_1380999	chr19_52154228_-	0.0234979770795074	0.199377031257113	.	.	.	.
SKCM	CAediting_1380999	chr19_52154228_-	5.78086990619153e-06	0.412022098969146	.	.	.	.
SARC	CAediting_1380999	chr19_52154228_-	1.80308022075023e-05	0.398186799132852	.	.	.	.
TGCT	CAediting_1380999	chr19_52154228_-	5.14284159495845e-05	0.360867742193616	.	.	.	.
THYM	CAediting_1380999	chr19_52154228_-	0.00401793246624129	0.281144955658083	0.0193961290422228	0.230061820815198	0.00243795733228717	0.295552430173449
BLCA	CAediting_1381000	chr19_52154229_-	0.00828187564307877	0.194117473519764	0.0424899391380721	0.149733167388098	.	.
LGG	CAediting_1381000	chr19_52154229_-	0.000329469171299464	0.441376880126612	.	.	.	.
BRCA	CAediting_1381000	chr19_52154229_-	3.6757450286072e-21	0.353074977198435	.	.	.	.
CESC	CAediting_1381000	chr19_52154229_-	0.0406002974503939	0.163100056185738	.	.	0.0366594919885138	0.16639510440974
LUSC	CAediting_1381000	chr19_52154229_-	.	.	.	.	0.0324337131628783	0.225709741785948
PRAD	CAediting_1381000	chr19_52154229_-	2.19625668582144e-07	0.322501069123462	.	.	.	.
HNSC	CAediting_1381000	chr19_52154229_-	0.0480241570713648	0.180890222499742	.	.	.	.
STAD	CAediting_1381000	chr19_52154229_-	6.16033861578823e-07	0.402702388670192	.	.	.	.
KIRC	CAediting_1381000	chr19_52154229_-	0.000313076007425407	0.220142396823796	.	.	.	.
UCEC	CAediting_1381000	chr19_52154229_-	2.28336080384075e-09	0.325211555462879	0.0420320148669455	0.113381292230336	.	.
ACC	CAediting_1381000	chr19_52154229_-	0.00805397611821498	0.339023610692519	.	.	.	.
ESCA	CAediting_1381000	chr19_52154229_-	0.0331972847768388	0.219906497080851	.	.	.	.
OV	CAediting_1381000	chr19_52154229_-	0.00578701202111319	0.170708367577641	.	.	.	.
PCPG	CAediting_1381000	chr19_52154229_-	2.99712433326446e-06	0.447759200595998	.	.	.	.
SKCM	CAediting_1381000	chr19_52154229_-	0.00591727457297387	0.323548707492642	.	.	.	.
SARC	CAediting_1381000	chr19_52154229_-	0.0453162896834516	0.22306800958465	.	.	.	.
TGCT	CAediting_1381000	chr19_52154229_-	6.34628022588112e-07	0.453907871528762	.	.	.	.
THYM	CAediting_1381000	chr19_52154229_-	0.00388750559975147	0.301433323838223	.	.	0.0289257806192892	0.230379581735055
BLCA	CAediting_1381001	chr19_52154232_-	.	.	0.00830283957133527	0.195648214871538	.	.
LGG	CAediting_1381001	chr19_52154232_-	0.0337898294180757	0.294934864338284	.	.	.	.
BRCA	CAediting_1381001	chr19_52154232_-	0.0220180753618552	0.0946719075848496	.	.	.	.
PCPG	CAediting_1381001	chr19_52154232_-	0.0110665022115626	0.288073436104737	.	.	.	.
THYM	CAediting_1381001	chr19_52154232_-	.	.	.	.	0.00105497176733568	0.359536424554294
BRCA	CAediting_1381008	chr19_52154267_-	0.0246343225742153	0.230484274208444	.	.	.	.
OV	CAediting_1381008	chr19_52154267_-	0.00387251909361983	0.340955652219089	.	.	.	.
BLCA	CAediting_1381017	chr19_52154310_-	6.48728018638386e-12	0.400048848177119	0.0320203649746891	0.129816284798061	.	.
LGG	CAediting_1381017	chr19_52154310_-	0.0060549319760245	0.212845709403683	.	.	.	.
BRCA	CAediting_1381017	chr19_52154310_-	3.24534320302571e-38	0.418093312361967	.	.	.	.
LIHC	CAediting_1381017	chr19_52154310_-	0.00632760678635056	0.325628650819298	.	.	.	.
CESC	CAediting_1381017	chr19_52154310_-	1.36447410086874e-06	0.318920121702574	.	.	.	.
LUAD	CAediting_1381017	chr19_52154310_-	0.00274792994591778	0.22318987155812	.	.	.	.
COAD	CAediting_1381017	chr19_52154310_-	2.35110829445213e-05	0.356558512939315	.	.	.	.
LUSC	CAediting_1381017	chr19_52154310_-	2.31012350568753e-09	0.436904488835286	0.0482670931411679	0.151271969083673	0.0305113374075789	0.165509652537436
GBM	CAediting_1381017	chr19_52154310_-	0.000132758473486112	0.359513711862417	.	.	.	.
PRAD	CAediting_1381017	chr19_52154310_-	1.37423773373424e-11	0.328404019160323	.	.	.	.
HNSC	CAediting_1381017	chr19_52154310_-	0.0231906239301409	0.165537164645426	0.00845249995883399	0.191558896228851	.	.
STAD	CAediting_1381017	chr19_52154310_-	0.00176723626451446	0.244578013757379	.	.	.	.
THCA	CAediting_1381017	chr19_52154310_-	1.03216143547301e-07	0.256952508962461	.	.	.	.
KIRC	CAediting_1381017	chr19_52154310_-	0.0366701345652666	0.107941993382286	.	.	.	.
UCEC	CAediting_1381017	chr19_52154310_-	3.40763900623572e-18	0.413903352009946	0.0103216515598399	0.127323506937777	.	.
ACC	CAediting_1381017	chr19_52154310_-	6.32577839202025e-05	0.456400245063233	.	.	.	.
OV	CAediting_1381017	chr19_52154310_-	2.70070232464159e-11	0.374026382275777	.	.	.	.
PCPG	CAediting_1381017	chr19_52154310_-	0.000296031967121414	0.288672345889084	.	.	.	.
SKCM	CAediting_1381017	chr19_52154310_-	7.72073837924909e-07	0.393110258521189	.	.	.	.
SARC	CAediting_1381017	chr19_52154310_-	5.97969545595599e-05	0.329123732122828	.	.	.	.
TGCT	CAediting_1381017	chr19_52154310_-	7.50508368073809e-08	0.444371665236279	.	.	.	.
THYM	CAediting_1381017	chr19_52154310_-	0.0275212004230887	0.214125173594228	0.0259769131717175	0.216260504560595	0.000177807249223452	0.356298521255104
BRCA	CAediting_1381025	chr19_52154416_-	1.37081523710082e-11	0.419216560983931	.	.	.	.
UCEC	CAediting_1381025	chr19_52154416_-	0.00354228511671711	0.26754986944713	.	.	.	.
OV	CAediting_1381025	chr19_52154416_-	0.000724095499690158	0.251061789481922	.	.	.	.
BLCA	CAediting_1381035	chr19_52154493_-	0.000822421801239207	0.337541221350589	.	.	.	.
BRCA	CAediting_1381035	chr19_52154493_-	2.69781373941382e-20	0.44375350820943	.	.	.	.
CESC	CAediting_1381035	chr19_52154493_-	0.00274636719744752	0.328569983546004	.	.	.	.
PRAD	CAediting_1381035	chr19_52154493_-	0.00651678781320274	0.229736121946713	.	.	.	.
UCEC	CAediting_1381035	chr19_52154493_-	6.32655085310936e-10	0.4194407300499	.	.	.	.
ACC	CAediting_1381035	chr19_52154493_-	2.36497323848477e-05	0.559862095262715	.	.	.	.
OV	CAediting_1381035	chr19_52154493_-	1.62880129158399e-05	0.294018916766748	.	.	.	.
PCPG	CAediting_1381035	chr19_52154493_-	0.0316350762141568	0.30135580834431	.	.	.	.
TGCT	CAediting_1381035	chr19_52154493_-	8.01872145777412e-06	0.557642081949716	.	.	.	.
BRCA	CAediting_1381036	chr19_52154496_-	0.0108472588322487	0.279980689004474	.	.	.	.
BLCA	CAediting_1381049	chr19_52154577_-	0.00453699453166279	0.239383589929217	.	.	.	.
LGG	CAediting_1381049	chr19_52154577_-	0.000926254407653954	0.372327295762766	.	.	.	.
BRCA	CAediting_1381049	chr19_52154577_-	4.78161344938214e-15	0.328137098766671	.	.	.	.
CESC	CAediting_1381049	chr19_52154577_-	0.031646426936726	0.182378357147255	.	.	.	.
LUSC	CAediting_1381049	chr19_52154577_-	0.00575607543011835	0.297115462675211	.	.	.	.
GBM	CAediting_1381049	chr19_52154577_-	0.000501679295585553	0.378070591054525	.	.	.	.
PRAD	CAediting_1381049	chr19_52154577_-	1.22799607449512e-07	0.336023345748612	.	.	.	.
HNSC	CAediting_1381049	chr19_52154577_-	0.038218634513214	0.205544958825869	.	.	.	.
UCEC	CAediting_1381049	chr19_52154577_-	1.13758385899928e-06	0.31706305344146	.	.	.	.
ACC	CAediting_1381049	chr19_52154577_-	0.0283999164587625	0.295680013887034	.	.	.	.
ESCA	CAediting_1381049	chr19_52154577_-	0.029049357127512	0.302914577411259	.	.	.	.
OV	CAediting_1381049	chr19_52154577_-	0.00372083727824184	0.241949596612319	.	.	.	.
SKCM	CAediting_1381049	chr19_52154577_-	0.00503031815339046	0.360535571475867	.	.	.	.
SARC	CAediting_1381049	chr19_52154577_-	0.0361756966012622	0.262431779885229	.	.	.	.
TGCT	CAediting_1381049	chr19_52154577_-	0.000837826746991849	0.398500585182677	.	.	.	.
THYM	CAediting_1381049	chr19_52154577_-	0.00518683516527716	0.317549988271245	.	.	.	.
BLCA	CAediting_1381051	chr19_52154584_-	0.0272957188352157	0.248389673655195	.	.	.	.
BRCA	CAediting_1381051	chr19_52154584_-	1.77424761044092e-07	0.288165901972479	.	.	.	.
GBM	CAediting_1381051	chr19_52154584_-	0.0351224497036259	0.25983876348144	.	.	.	.
PRAD	CAediting_1381051	chr19_52154584_-	1.57716411969781e-05	0.381519305790538	.	.	.	.
UCEC	CAediting_1381051	chr19_52154584_-	1.15095639602443e-06	0.38138446842912	.	.	.	.
OV	CAediting_1381051	chr19_52154584_-	0.000229661629006716	0.317755968796395	.	.	.	.
BRCA	CAediting_1381055	chr19_52154609_-	4.91655368329034e-06	0.263285830960278	.	.	.	.
CESC	CAediting_1381055	chr19_52154609_-	0.010005512702062	0.33563193500129	.	.	.	.
UCEC	CAediting_1381055	chr19_52154609_-	0.000150725657638359	0.359954471351513	0.0101078146811613	0.24883408954783	.	.
OV	CAediting_1381055	chr19_52154609_-	5.36272815988429e-05	0.335641072186243	.	.	.	.
BLCA	CAediting_1381058	chr19_52154626_-	0.000637730231068326	0.466535262077226	.	.	.	.
BRCA	CAediting_1381058	chr19_52154626_-	4.18800151377282e-09	0.326428719098394	.	.	.	.
CESC	CAediting_1381058	chr19_52154626_-	0.0496577495729976	0.263589511623706	.	.	.	.
PRAD	CAediting_1381058	chr19_52154626_-	0.0030433922430907	0.395902558807038	.	.	.	.
THCA	CAediting_1381058	chr19_52154626_-	0.000937098720353546	0.367381930356485	.	.	.	.
KIRC	CAediting_1381058	chr19_52154626_-	0.0410596487223055	0.204697673640331	.	.	.	.
UCEC	CAediting_1381058	chr19_52154626_-	0.00075468674571145	0.358490951873657	.	.	.	.

Top

Relation with cancer stages for ZNF836

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
BLCA	pathologic_stage	CAediting_1381001	chr19_52154232_-	0.00788487101228694	0.197460050907895
BLCA	pathologic_stage	CAediting_1381049	chr19_52154577_-	0.0166060782222264	0.20361401546624
BLCA	pathologic_stage	CAediting_1381051	chr19_52154584_-	0.0221914555074444	0.257072670204668
BRCA	pathologic_stage	CAediting_1381058	chr19_52154626_-	0.042489065249776	0.117017077769542
ESCA	clinical_stage	CAediting_1380982	chr19_52154165_-	0.012680079346453	-0.457057371477991
ESCA	pathologic_stage	CAediting_1380977	chr19_52154143_-	0.00741304978749759	0.278959623807729
HNSC	pathologic_stage	CAediting_1381001	chr19_52154232_-	0.00527183937762349	0.290155950591359
KIRC	pathologic_stage	CAediting_1381017	chr19_52154310_-	0.00288787270200908	0.153660941052572
KIRC	pathologic_stage	CAediting_1381035	chr19_52154493_-	0.0185959633346772	0.205400155318868
KIRC	pathologic_stage	CAediting_1381051	chr19_52154584_-	0.0133139475442759	0.248022710058693
KIRP	clinical_stage	CAediting_1380977	chr19_52154143_-	0.0098809084580237	0.298137116552771
KIRP	clinical_stage	CAediting_1380999	chr19_52154228_-	0.0246612527053051	0.24360862832691
KIRP	pathologic_stage	CAediting_1380977	chr19_52154143_-	0.0450933059603774	0.207198113270578
KIRP	pathologic_stage	CAediting_1380999	chr19_52154228_-	0.00566825461038644	0.260961196322654
KIRP	pathologic_stage	CAediting_1381001	chr19_52154232_-	0.0445566401126897	0.248127475870812
LUAD	pathologic_stage	CAediting_1381000	chr19_52154229_-	0.00882957314953173	0.259313427337562
STAD	pathologic_stage	CAediting_1381058	chr19_52154626_-	0.0344298406317827	-0.258838428031502
TGCT	clinical_stage	CAediting_1381000	chr19_52154229_-	0.00999309144057937	-0.317373067997447
TGCT	pathologic_stage	CAediting_1380977	chr19_52154143_-	0.0288728802585107	-0.345742974567086
TGCT	pathologic_stage	CAediting_1380999	chr19_52154228_-	0.00887874519690439	-0.315036372181082
TGCT	pathologic_stage	CAediting_1381000	chr19_52154229_-	0.00935658131510183	-0.330177508018475
TGCT	pathologic_stage	CAediting_1381017	chr19_52154310_-	0.0143292448500697	-0.291559696653007
THCA	pathologic_stage	CAediting_1380999	chr19_52154228_-	0.0294709948626583	0.117575067346208
THCA	pathologic_stage	CAediting_1381017	chr19_52154310_-	0.0436267949831359	0.0994585117282526
THCA	pathologic_stage	CAediting_1381035	chr19_52154493_-	0.0259335189515972	0.17607864310213

Top

Relation with survival for ZNF836

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
BLCA	CAediting_1381049	chr19_52154577_-	0.0160503313674932	0.00180994	21.89
HNSC	CAediting_1380977	chr19_52154143_-	0.0117840538609039	0.0121408	0.0574797
UCEC	CAediting_1380999	chr19_52154228_-	0.00491818982382841	0.00723063	15.2664
UCEC	CAediting_1381055	chr19_52154609_-	0.0134341890389957	0.0125822	99.4247
KIRP	CAediting_1381000	chr19_52154229_-	0.0315462565714444	0.0416656	5750280

Top

RelatedDrugs for ZNF836

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

Top

RelatedDiseases for ZNF836

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene