CAeditome Logo

Home

Download

Statistics

Examples

Help

Contact
Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: DAG1 (CAeditome ID:1605)

Gene summary for DAG1

check button Gene summary
Gene informationGene symbol

DAG1

Gene ID

1605

Gene namedystroglycan 1
Synonyms156DAG|A3a|AGRNR|DAG|LGMDR16|MDDGA9|MDDGC7|MDDGC9
Cytomap

3p21.31

Type of geneprotein-coding
Descriptiondystroglycandystroglycan 1 (dystrophin-associated glycoprotein 1)
Modification date20210518
UniProtAcc

Q14118

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
DAG1

GO:0005925

Dystroglycan

18341635

DAG1

GO:0001618

Dystroglycan

22156524

DAG1

GO:0003779

Dystroglycan

18341635

DAG1

GO:0015631

Dystroglycan

18341635

DAG1

GO:0042169

Dystroglycan

11724572

DAG1

GO:0051393

Dystroglycan

18341635

DAG1

GO:0006509

Dystroglycan

19946898

DAG1

GO:0019048

Dystroglycan

16254364

DAG1

GO:0005604

Dystroglycan

19348877

DAG1

GO:0005615

Dystroglycan

18201566

DAG1

GO:0005654

Dystroglycan

0000052

DAG1

GO:0005654

Dystroglycan

18764929

DAG1

GO:0005737

Dystroglycan

18764929

DAG1

GO:0005886

Dystroglycan

0000052

DAG1

GO:0005886

Dystroglycan

18341635

DAG1

GO:0005886

Dystroglycan

18764929

DAG1

GO:0005886

Dystroglycan

8017170

DAG1

GO:0016021

Dystroglycan

17628813

DAG1

GO:0030027

Dystroglycan

18341635

DAG1

GO:0030175

Dystroglycan

18341635

DAG1

GO:0043231

Dystroglycan

0000052

DAG1

GO:0070938

Dystroglycan

18341635

DAG1

GO:0016010

Dystroglycan

17993586


Top

RNA A-to-I events for DAG1

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000173402.10

check button RNA A-to-I editing events in Cancer.
CAediting_280050(49472534, +), CAediting_280051(49472910, +), CAediting_280052(49472955, +), CAediting_280053(49472958, +), CAediting_280054(49472963, +), CAediting_280055(49472965, +), CAediting_280056(49472968, +), CAediting_280057(49473343, +), CAediting_280058(49473683, +), CAediting_280059(49473686, +), CAediting_280060(49473764, +), CAediting_280061(49473858, +), CAediting_280062(49473991, +), CAediting_280063(49474021, +), CAediting_280064(49474446, +), CAediting_280065(49474546, +), CAediting_280066(49475717, +), CAediting_280067(49475833, +), CAediting_280068(49475895, +), CAediting_280069(49475989, +), CAediting_280070(49476318, +), CAediting_280071(49476328, +), CAediting_280072(49476404, +), CAediting_280073(49477259, +), CAediting_280074(49477330, +), CAediting_280075(49477365, +), CAediting_280076(49477433, +), CAediting_280077(49477570, +), CAediting_280078(49477700, +), CAediting_280079(49477761, +), CAediting_280080(49477815, +), CAediting_280081(49477831, +), CAediting_280082(49477841, +), CAediting_280083(49477842, +), CAediting_280084(49477847, +), CAediting_280085(49477851, +), CAediting_280086(49477867, +), CAediting_280087(49477868, +), CAediting_280088(49477883, +), CAediting_280089(49477912, +), CAediting_280090(49477925, +), CAediting_280091(49478011, +), CAediting_280092(49478012, +), CAediting_280093(49478017, +), CAediting_280094(49478065, +), CAediting_280095(49478088, +), CAediting_280096(49478090, +), CAediting_280097(49478091, +), CAediting_280098(49478102, +), CAediting_280099(49478107, +), CAediting_280100(49478114, +), CAediting_280101(49478115, +), CAediting_280102(49478120, +), CAediting_280103(49478124, +), CAediting_280104(49478146, +), CAediting_280105(49478152, +), CAediting_280106(49478156, +), CAediting_280107(49478202, +), CAediting_280108(49478206, +), CAediting_280109(49478219, +), CAediting_280110(49478224, +), CAediting_280111(49478339, +), CAediting_280112(49478340, +), CAediting_280113(49478348, +), CAediting_280114(49478361, +), CAediting_280115(49478362, +), CAediting_280116(49478375, +), CAediting_280117(49478380, +), CAediting_280118(49478381, +), CAediting_280119(49478385, +), CAediting_280120(49478409, +), CAediting_280121(49478412, +), CAediting_280122(49478495, +), CAediting_280123(49478612, +), CAediting_280124(49478746, +), CAediting_280125(49478747, +), CAediting_280126(49478913, +), CAediting_280127(49478931, +), CAediting_280128(49478943, +), CAediting_280129(49478953, +), CAediting_280130(49479005, +), CAediting_280131(49479020, +), CAediting_280132(49479409, +), CAediting_280133(49479410, +), CAediting_280134(49479452, +), CAediting_280135(49479777, +), CAediting_280136(49481260, +), CAediting_280137(49481276, +), CAediting_280138(49481286, +), CAediting_280139(49481303, +), CAediting_280140(49481317, +), CAediting_280141(49481325, +), CAediting_280142(49481329, +), CAediting_280143(49481351, +), CAediting_280144(49485875, +), CAediting_280145(49486425, +), CAediting_280146(49488677, +), CAediting_280147(49488696, +), CAediting_280148(49488703, +), CAediting_280149(49488720, +), CAediting_280150(49488729, +), CAediting_280151(49488742, +), CAediting_280152(49490142, +), CAediting_280153(49490699, +), CAediting_280154(49491036, +), CAediting_280155(49492124, +), CAediting_280156(49492503, +), CAediting_280157(49492504, +), CAediting_280158(49492526, +), CAediting_280159(49492527, +), CAediting_280160(49493205, +), CAediting_280161(49496258, +), CAediting_280162(49496266, +), CAediting_280163(49496720, +), CAediting_280164(49496744, +), CAediting_280165(49496807, +), CAediting_280166(49497113, +), CAediting_280167(49497181, +), CAediting_280168(49497182, +), CAediting_280169(49497190, +), CAediting_280170(49497212, +), CAediting_280171(49497272, +), CAediting_280172(49497275, +), CAediting_280173(49497286, +), CAediting_280174(49497303, +), CAediting_280175(49497316, +), CAediting_280176(49497322, +), CAediting_280177(49497358, +), CAediting_280178(49497518, +), CAediting_280179(49497527, +), CAediting_280180(49497532, +), CAediting_280181(49497537, +), CAediting_280182(49497551, +), CAediting_280183(49503622, +), CAediting_280184(49503665, +), CAediting_280185(49503694, +), CAediting_280186(49503725, +), CAediting_280187(49506856, +), CAediting_280188(49507361, +), CAediting_280189(49508246, +), CAediting_280190(49508499, +), CAediting_280191(49508718, +), CAediting_280192(49509223, +), CAediting_280193(49509224, +), CAediting_280194(49509251, +), CAediting_280195(49509288, +), CAediting_280196(49509352, +), CAediting_280197(49517178, +), CAediting_280198(49517200, +), CAediting_280199(49517253, +), CAediting_280200(49517255, +), CAediting_280201(49524560, +), CAediting_280202(49524606, +), CAediting_280203(49526119, +), CAediting_280204(49526437, +), CAediting_280205(49526447, +), CAediting_280206(49526580, +), CAediting_280207(49526610, +), CAediting_280208(49526620, +), CAediting_280209(49526656, +),

Top

RNA editing positional annotations for DAG1 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_280050chr3_49472534_+ncRNA_intronic
CAediting_280051chr3_49472910_+ncRNA_intronic
CAediting_280052chr3_49472955_+ncRNA_intronic
CAediting_280053chr3_49472958_+ncRNA_intronic
CAediting_280054chr3_49472963_+ncRNA_intronic
CAediting_280055chr3_49472965_+ncRNA_intronic
CAediting_280056chr3_49472968_+ncRNA_intronic
CAediting_280057chr3_49473343_+ncRNA_intronic
CAediting_280058chr3_49473683_+ncRNA_intronic
CAediting_280059chr3_49473686_+ncRNA_intronic
CAediting_280060chr3_49473764_+ncRNA_intronic
CAediting_280061chr3_49473858_+ncRNA_intronic
CAediting_280062chr3_49473991_+ncRNA_intronic
CAediting_280063chr3_49474021_+ncRNA_intronic
CAediting_280064chr3_49474446_+ncRNA_intronic
CAediting_280065chr3_49474546_+ncRNA_intronic
CAediting_280066chr3_49475717_+ncRNA_intronic
CAediting_280067chr3_49475833_+ncRNA_intronic
CAediting_280068chr3_49475895_+ncRNA_intronic
CAediting_280069chr3_49475989_+ncRNA_intronic
CAediting_280070chr3_49476318_+ncRNA_intronic
CAediting_280071chr3_49476328_+ncRNA_intronic
CAediting_280072chr3_49476404_+ncRNA_intronic
CAediting_280073chr3_49477259_+ncRNA_intronic
CAediting_280074chr3_49477330_+ncRNA_intronic
CAediting_280075chr3_49477365_+ncRNA_intronic
CAediting_280076chr3_49477433_+ncRNA_intronic
CAediting_280077chr3_49477570_+ncRNA_intronic
CAediting_280078chr3_49477700_+ncRNA_intronic
CAediting_280079chr3_49477761_+ncRNA_intronic
CAediting_280080chr3_49477815_+ncRNA_intronic
CAediting_280081chr3_49477831_+ncRNA_intronic
CAediting_280082chr3_49477841_+ncRNA_intronic
CAediting_280083chr3_49477842_+ncRNA_intronic
CAediting_280084chr3_49477847_+ncRNA_intronic
CAediting_280085chr3_49477851_+ncRNA_intronic
CAediting_280086chr3_49477867_+ncRNA_intronic
CAediting_280087chr3_49477868_+ncRNA_intronic
CAediting_280088chr3_49477883_+ncRNA_intronic
CAediting_280089chr3_49477912_+ncRNA_intronic
CAediting_280090chr3_49477925_+ncRNA_intronic
CAediting_280091chr3_49478011_+ncRNA_intronic
CAediting_280092chr3_49478012_+ncRNA_intronic
CAediting_280093chr3_49478017_+ncRNA_intronic
CAediting_280094chr3_49478065_+ncRNA_intronic
CAediting_280095chr3_49478088_+ncRNA_intronic
CAediting_280096chr3_49478090_+ncRNA_intronic
CAediting_280097chr3_49478091_+ncRNA_intronic
CAediting_280098chr3_49478102_+ncRNA_intronic
CAediting_280099chr3_49478107_+ncRNA_intronic
CAediting_280100chr3_49478114_+ncRNA_intronic
CAediting_280101chr3_49478115_+ncRNA_intronic
CAediting_280102chr3_49478120_+ncRNA_intronic
CAediting_280103chr3_49478124_+ncRNA_intronic
CAediting_280104chr3_49478146_+ncRNA_intronic
CAediting_280105chr3_49478152_+ncRNA_intronic
CAediting_280106chr3_49478156_+ncRNA_intronic
CAediting_280107chr3_49478202_+ncRNA_intronic
CAediting_280108chr3_49478206_+ncRNA_intronic
CAediting_280109chr3_49478219_+ncRNA_intronic
CAediting_280110chr3_49478224_+ncRNA_intronic
CAediting_280111chr3_49478339_+ncRNA_intronic
CAediting_280112chr3_49478340_+ncRNA_intronic
CAediting_280113chr3_49478348_+ncRNA_intronic
CAediting_280114chr3_49478361_+ncRNA_intronic
CAediting_280115chr3_49478362_+ncRNA_intronic
CAediting_280116chr3_49478375_+ncRNA_intronic
CAediting_280117chr3_49478380_+ncRNA_intronic
CAediting_280118chr3_49478381_+ncRNA_intronic
CAediting_280119chr3_49478385_+ncRNA_intronic
CAediting_280120chr3_49478409_+ncRNA_intronic
CAediting_280121chr3_49478412_+ncRNA_intronic
CAediting_280122chr3_49478495_+ncRNA_intronic
CAediting_280123chr3_49478612_+ncRNA_intronic
CAediting_280124chr3_49478746_+ncRNA_intronic
CAediting_280125chr3_49478747_+ncRNA_intronic
CAediting_280126chr3_49478913_+ncRNA_intronic
CAediting_280127chr3_49478931_+ncRNA_intronic
CAediting_280128chr3_49478943_+ncRNA_intronic
CAediting_280129chr3_49478953_+ncRNA_intronic
CAediting_280130chr3_49479005_+ncRNA_intronic
CAediting_280131chr3_49479020_+ncRNA_intronic
CAediting_280132chr3_49479409_+ncRNA_intronic
CAediting_280133chr3_49479410_+ncRNA_intronic
CAediting_280134chr3_49479452_+ncRNA_intronic
CAediting_280135chr3_49479777_+ncRNA_intronic
CAediting_280136chr3_49481260_+ncRNA_intronic
CAediting_280137chr3_49481276_+ncRNA_intronic
CAediting_280138chr3_49481286_+ncRNA_intronic
CAediting_280139chr3_49481303_+ncRNA_intronic
CAediting_280140chr3_49481317_+ncRNA_intronic
CAediting_280141chr3_49481325_+ncRNA_intronic
CAediting_280142chr3_49481329_+ncRNA_intronic
CAediting_280143chr3_49481351_+ncRNA_intronic
CAediting_280144chr3_49485875_+ncRNA_intronic
CAediting_280145chr3_49486425_+ncRNA_intronic
CAediting_280146chr3_49488677_+ncRNA_intronic
CAediting_280147chr3_49488696_+ncRNA_splicing
CAediting_280148chr3_49488703_+ncRNA_exonic
CAediting_280149chr3_49488720_+ncRNA_exonic
CAediting_280150chr3_49488729_+ncRNA_exonic
CAediting_280151chr3_49488742_+ncRNA_exonic
CAediting_280152chr3_49490142_+ncRNA_intronic
CAediting_280153chr3_49490699_+ncRNA_intronic
CAediting_280154chr3_49491036_+ncRNA_intronic
CAediting_280155chr3_49492124_+ncRNA_intronic
CAediting_280156chr3_49492503_+ncRNA_intronic
CAediting_280157chr3_49492504_+ncRNA_intronic
CAediting_280158chr3_49492526_+ncRNA_intronic
CAediting_280159chr3_49492527_+ncRNA_intronic
CAediting_280160chr3_49493205_+ncRNA_intronic
CAediting_280161chr3_49496258_+ncRNA_intronic
CAediting_280162chr3_49496266_+ncRNA_intronic
CAediting_280163chr3_49496720_+ncRNA_intronic
CAediting_280164chr3_49496744_+ncRNA_intronic
CAediting_280165chr3_49496807_+ncRNA_intronic
CAediting_280166chr3_49497113_+ncRNA_intronic
CAediting_280167chr3_49497181_+ncRNA_intronic
CAediting_280168chr3_49497182_+ncRNA_intronic
CAediting_280169chr3_49497190_+ncRNA_intronic
CAediting_280170chr3_49497212_+ncRNA_intronic
CAediting_280171chr3_49497272_+ncRNA_intronic
CAediting_280172chr3_49497275_+ncRNA_intronic
CAediting_280173chr3_49497286_+ncRNA_intronic
CAediting_280174chr3_49497303_+ncRNA_intronic
CAediting_280175chr3_49497316_+ncRNA_intronic
CAediting_280176chr3_49497322_+ncRNA_intronic
CAediting_280177chr3_49497358_+ncRNA_intronic
CAediting_280178chr3_49497518_+ncRNA_intronic
CAediting_280179chr3_49497527_+ncRNA_intronic
CAediting_280180chr3_49497532_+ncRNA_intronic
CAediting_280181chr3_49497537_+ncRNA_intronic
CAediting_280182chr3_49497551_+ncRNA_intronic
CAediting_280183chr3_49503622_+ncRNA_intronic
CAediting_280184chr3_49503665_+ncRNA_intronic
CAediting_280185chr3_49503694_+ncRNA_intronic
CAediting_280186chr3_49503725_+ncRNA_intronic
CAediting_280187chr3_49506856_+ncRNA_intronic
CAediting_280188chr3_49507361_+ncRNA_intronic
CAediting_280189chr3_49508246_+ncRNA_intronic
CAediting_280190chr3_49508499_+ncRNA_intronic
CAediting_280191chr3_49508718_+ncRNA_intronic
CAediting_280192chr3_49509223_+ncRNA_intronic
CAediting_280193chr3_49509224_+ncRNA_intronic
CAediting_280194chr3_49509251_+ncRNA_intronic
CAediting_280195chr3_49509288_+ncRNA_intronic
CAediting_280196chr3_49509352_+ncRNA_intronic
CAediting_280197chr3_49517178_+ncRNA_intronic
CAediting_280198chr3_49517200_+ncRNA_intronic
CAediting_280199chr3_49517253_+ncRNA_intronic
CAediting_280200chr3_49517255_+ncRNA_intronic
CAediting_280201chr3_49524560_+ncRNA_intronic
CAediting_280202chr3_49524606_+ncRNA_intronic
CAediting_280203chr3_49526119_+ncRNA_intronic
CAediting_280204chr3_49526437_+ncRNA_intronic
CAediting_280205chr3_49526447_+ncRNA_intronic
CAediting_280206chr3_49526580_+ncRNA_intronic
CAediting_280207chr3_49526610_+ncRNA_intronic
CAediting_280208chr3_49526620_+ncRNA_intronic
CAediting_280209chr3_49526656_+ncRNA_intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_280050chr3_49472534_+SINEAluAluY
CAediting_280051chr3_49472910_+SINEAluAluSq2
CAediting_280052chr3_49472955_+SINEAluAluSq2
CAediting_280053chr3_49472958_+SINEAluAluSq2
CAediting_280054chr3_49472963_+SINEAluAluSq2
CAediting_280055chr3_49472965_+SINEAluAluSq2
CAediting_280056chr3_49472968_+SINEAluAluSq2
CAediting_280057chr3_49473343_+SINEAluAluYk4
CAediting_280058chr3_49473683_+SINEAluAluSx1
CAediting_280059chr3_49473686_+SINEAluAluSx1
CAediting_280060chr3_49473764_+SINEAluAluSx1
CAediting_280061chr3_49473858_+SINEAluAluSx1
CAediting_280062chr3_49473991_+SINEAluAluJb
CAediting_280063chr3_49474021_+SINEAluAluJb
CAediting_280064chr3_49474446_+SINEAluAluSx
CAediting_280065chr3_49474546_+SINEAluAluSx
CAediting_280066chr3_49475717_+SINEAluAluY
CAediting_280067chr3_49475833_+SINEAluAluY
CAediting_280068chr3_49475895_+SINEAluAluY
CAediting_280069chr3_49475989_+SINEAluAluY
CAediting_280070chr3_49476318_+SINEAluAluSx
CAediting_280071chr3_49476328_+SINEAluAluSx
CAediting_280072chr3_49476404_+SINEAluAluSx
CAediting_280073chr3_49477259_+SINEAluAluSx
CAediting_280074chr3_49477330_+SINEAluAluJo
CAediting_280075chr3_49477365_+SINEAluAluJo
CAediting_280076chr3_49477433_+SINEAluAluJo
CAediting_280077chr3_49477570_+SINEAluAluJo
CAediting_280078chr3_49477700_+SINEAluAluSq2
CAediting_280079chr3_49477761_+SINEAluAluSq2
CAediting_280080chr3_49477815_+SINEAluAluSq2
CAediting_280081chr3_49477831_+SINEAluAluSq2
CAediting_280082chr3_49477841_+SINEAluAluSq2
CAediting_280083chr3_49477842_+SINEAluAluSq2
CAediting_280084chr3_49477847_+SINEAluAluSq2
CAediting_280085chr3_49477851_+SINEAluAluSq2
CAediting_280086chr3_49477867_+SINEAluAluSq2
CAediting_280087chr3_49477868_+SINEAluAluSq2
CAediting_280088chr3_49477883_+SINEAluAluSq2
CAediting_280089chr3_49477912_+SINEAluAluSq2
CAediting_280090chr3_49477925_+SINEAluAluSq2
CAediting_280091chr3_49478011_+SINEAluAluSz
CAediting_280092chr3_49478012_+SINEAluAluSz
CAediting_280093chr3_49478017_+SINEAluAluSz
CAediting_280094chr3_49478065_+SINEAluAluSz
CAediting_280095chr3_49478088_+SINEAluAluSz
CAediting_280096chr3_49478090_+SINEAluAluSz
CAediting_280097chr3_49478091_+SINEAluAluSz
CAediting_280098chr3_49478102_+SINEAluAluSz
CAediting_280099chr3_49478107_+SINEAluAluSz
CAediting_280100chr3_49478114_+SINEAluAluSz
CAediting_280101chr3_49478115_+SINEAluAluSz
CAediting_280102chr3_49478120_+SINEAluAluSz
CAediting_280103chr3_49478124_+SINEAluAluSz
CAediting_280104chr3_49478146_+SINEAluAluSz
CAediting_280105chr3_49478152_+SINEAluAluSz
CAediting_280106chr3_49478156_+SINEAluAluSz
CAediting_280107chr3_49478202_+SINEAluAluSz
CAediting_280108chr3_49478206_+SINEAluAluSz
CAediting_280109chr3_49478219_+SINEAluAluSz
CAediting_280110chr3_49478224_+SINEAluAluSz
CAediting_280111chr3_49478339_+SINEAluAluJb
CAediting_280112chr3_49478340_+SINEAluAluJb
CAediting_280113chr3_49478348_+SINEAluAluJb
CAediting_280114chr3_49478361_+SINEAluAluJb
CAediting_280115chr3_49478362_+SINEAluAluJb
CAediting_280116chr3_49478375_+SINEAluAluJb
CAediting_280117chr3_49478380_+SINEAluAluJb
CAediting_280118chr3_49478381_+SINEAluAluJb
CAediting_280119chr3_49478385_+SINEAluAluJb
CAediting_280120chr3_49478409_+SINEAluAluJb
CAediting_280121chr3_49478412_+SINEAluAluJb
CAediting_280122chr3_49478495_+SINEAluAluJb
CAediting_280123chr3_49478612_+SINEAluAluJr4
CAediting_280124chr3_49478746_+SINEAluAluJb
CAediting_280125chr3_49478747_+SINEAluAluJb
CAediting_280126chr3_49478913_+SINEAluAluSg
CAediting_280127chr3_49478931_+SINEAluAluSg
CAediting_280128chr3_49478943_+SINEAluAluSg
CAediting_280129chr3_49478953_+SINEAluAluSg
CAediting_280130chr3_49479005_+SINEAluAluSg
CAediting_280131chr3_49479020_+SINEAluAluSg
CAediting_280132chr3_49479409_+SINEAluAluSx
CAediting_280133chr3_49479410_+SINEAluAluSx
CAediting_280134chr3_49479452_+SINEAluAluSx
CAediting_280135chr3_49479777_+SINEAluAluSx3
CAediting_280136chr3_49481260_+SINEAluAluY
CAediting_280137chr3_49481276_+SINEAluAluY
CAediting_280138chr3_49481286_+SINEAluAluY
CAediting_280139chr3_49481303_+SINEAluAluY
CAediting_280140chr3_49481317_+SINEAluAluY
CAediting_280141chr3_49481325_+SINEAluAluY
CAediting_280142chr3_49481329_+SINEAluAluY
CAediting_280143chr3_49481351_+SINEAluAluY
CAediting_280144chr3_49485875_+SINEAluAluJr
CAediting_280145chr3_49486425_+SINEAluAluY
CAediting_280146chr3_49488677_+SINEAluAluSx3
CAediting_280147chr3_49488696_+SINEAluAluSx3
CAediting_280148chr3_49488703_+SINEAluAluSx3
CAediting_280149chr3_49488720_+SINEAluAluSx3
CAediting_280150chr3_49488729_+SINEAluAluSx3
CAediting_280151chr3_49488742_+SINEAluAluSx3
CAediting_280152chr3_49490142_+SINEAluAluY
CAediting_280153chr3_49490699_+SINEAluAluJb
CAediting_280154chr3_49491036_+SINEAluAluSx
CAediting_280155chr3_49492124_+SINEAluAluSg
CAediting_280156chr3_49492503_+SINEAluAluJb
CAediting_280157chr3_49492504_+SINEAluAluJb
CAediting_280158chr3_49492526_+SINEAluAluJb
CAediting_280159chr3_49492527_+SINEAluAluJb
CAediting_280160chr3_49493205_+SINEAluAluJo
CAediting_280161chr3_49496258_+SINEAluAluJb
CAediting_280162chr3_49496266_+SINEAluAluJb
CAediting_280163chr3_49496720_+SINEAluAluSc
CAediting_280164chr3_49496744_+SINEAluAluSc
CAediting_280165chr3_49496807_+SINEAluAluSc
CAediting_280166chr3_49497113_+SINEAluAluJr4
CAediting_280167chr3_49497181_+SINEAluAluSx1
CAediting_280168chr3_49497182_+SINEAluAluSx1
CAediting_280169chr3_49497190_+SINEAluAluSx1
CAediting_280170chr3_49497212_+SINEAluAluSx1
CAediting_280171chr3_49497272_+SINEAluAluSx1
CAediting_280172chr3_49497275_+SINEAluAluSx1
CAediting_280173chr3_49497286_+SINEAluAluSx1
CAediting_280174chr3_49497303_+SINEAluAluSx1
CAediting_280175chr3_49497316_+SINEAluAluSx1
CAediting_280176chr3_49497322_+SINEAluAluSx1
CAediting_280177chr3_49497358_+SINEAluAluSx1
CAediting_280178chr3_49497518_+SINEAluAluJr4
CAediting_280179chr3_49497527_+SINEAluAluJr4
CAediting_280180chr3_49497532_+SINEAluAluJr4
CAediting_280181chr3_49497537_+SINEAluAluJr4
CAediting_280182chr3_49497551_+SINEAluAluJr4
CAediting_280183chr3_49503622_+SINEAluAluJb
CAediting_280184chr3_49503665_+SINEAluAluJb
CAediting_280185chr3_49503694_+SINEAluAluJb
CAediting_280186chr3_49503725_+SINEAluAluJb
CAediting_280187chr3_49506856_+SINEAluFLAM_A
CAediting_280188chr3_49507361_+SINEAluAluSx1
CAediting_280189chr3_49508246_+SINEAluAluSq2
CAediting_280190chr3_49508499_+SINEAluAluSx3
CAediting_280191chr3_49508718_+SINEAluAluSq2
CAediting_280192chr3_49509223_+SINEAluAluJr4
CAediting_280193chr3_49509224_+SINEAluAluJr4
CAediting_280194chr3_49509251_+SINEAluAluJr4
CAediting_280195chr3_49509288_+SINEAluAluJr4
CAediting_280196chr3_49509352_+SINEAluAluJr4
CAediting_280197chr3_49517178_+SINEAluAluY
CAediting_280198chr3_49517200_+SINEAluAluY
CAediting_280199chr3_49517253_+SINEAluAluY
CAediting_280200chr3_49517255_+SINEAluAluY
CAediting_280201chr3_49524560_+SINEAluAluJr
CAediting_280202chr3_49524606_+SINEAluAluJr
CAediting_280203chr3_49526119_+SINEAluAluSq
CAediting_280204chr3_49526437_+SINEAluAluSx1
CAediting_280205chr3_49526447_+SINEAluAluSx1
CAediting_280206chr3_49526580_+SINEAluAluSx1
CAediting_280207chr3_49526610_+SINEAluAluSx1
CAediting_280208chr3_49526620_+SINEAluAluSx1
CAediting_280209chr3_49526656_+SINEAluAluSx1

Top

RNA A-to-I editing events in the alternative splicing sites for DAG1

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength
ESCAediting_280146chr3_49488677_+49488677:494886993SS0+20iACTGAAACCTTTGCTTCCCAGGG-10.96GCTGAAACCTTTGCTTCCCAGGG-12.08
MEX_2CAediting_280146chr3_49488677_+49488677:494886993SS0+20iACTGAAACCTTTGCTTCCCAGGG-10.96GCTGAAACCTTTGCTTCCCAGGG-12.08
ESCAediting_280147chr3_49488696_+49488677:494886993SS0+1iACTGAAACCTTTGCTTCCCAGGG-10.96ACTGAAACCTTTGCTTCCCGGGG-2.21
MEX_2CAediting_280147chr3_49488696_+49488677:494886993SS0+1iACTGAAACCTTTGCTTCCCAGGG-10.96ACTGAAACCTTTGCTTCCCGGGG-2.21

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000173402.10.DAG1.
boxplot

check button Correlation between RNA A-to-I editing and PSI for ENSG00000173402.10.DAG1.

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for DAG1

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

check button Correlation between RNA A-to-I editing and gene expression.

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

Top

Protein coding region RNA A-to-I editings for DAG1

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


Top

The effects of the RNA editing to the miRNA binding sites for DAG1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_524911chr7_5495852_-ENSG00000173402.10ENST00000515359hsa-miR-589-3p49533857495338648mer-1a4953384349533864147-17.68
CAediting_524911chr7_5495852_-ENSG00000173402.10ENST00000538711hsa-miR-589-3p49533857495338648mer-1a4953384349533864147-17.68
CAediting_524911chr7_5495852_-ENSG00000173402.10ENST00000539901hsa-miR-589-3p49533857495338648mer-1a4953384349533864147-17.68
CAediting_524911chr7_5495852_-ENSG00000173402.10ENST00000541308hsa-miR-589-3p49533857495338648mer-1a4953384349533864147-17.68
CAediting_524911chr7_5495852_-ENSG00000173402.10ENST00000545947hsa-miR-589-3p49533857495338648mer-1a4953384349533864147-17.68
CAediting_524911chr7_5495852_-ENSG00000173402.10ENST00000308775hsa-miR-589-3p49533857495338648mer-1a4953384349533864147-17.68
CAediting_1524209chrX_134546392_-ENSG00000173402.10ENST00000515359hsa-miR-503-5p49534939495349446mer4953492349534945145-21.72
CAediting_1524209chrX_134546392_-ENSG00000173402.10ENST00000538711hsa-miR-503-5p49534939495349446mer4953492349534945145-21.72
CAediting_1524209chrX_134546392_-ENSG00000173402.10ENST00000539901hsa-miR-503-5p49534939495349446mer4953492349534945145-21.72
CAediting_1524209chrX_134546392_-ENSG00000173402.10ENST00000541308hsa-miR-503-5p49534939495349446mer4953492349534945145-21.72
CAediting_1524209chrX_134546392_-ENSG00000173402.10ENST00000545947hsa-miR-503-5p49534939495349446mer4953492349534945145-21.72
CAediting_1524209chrX_134546392_-ENSG00000173402.10ENST00000308775hsa-miR-503-5p49534939495349446mer4953492349534945145-21.72

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for DAG1

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.
ENST00000419218.4protein_codingSoverviewSoverview
ENST00000435508.5protein_codingSoverviewSoverview
ENST00000496474.1processed_transcriptSoverviewSoverview

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI
CAediting_280146ENST00000419218.4chr3_49488677_+-245.70-246.10-252.00
CAediting_280147ENST00000419218.4chr3_49488696_+-245.40-246.10-252.00
CAediting_280148ENST00000419218.4chr3_49488703_+-245.80-246.10-252.00
CAediting_280149ENST00000419218.4chr3_49488720_+-246.80-246.10-252.00
CAediting_280150ENST00000419218.4chr3_49488729_+-246.30-246.10-252.00
CAediting_280151ENST00000419218.4chr3_49488742_+-249.20-246.10-252.00
CAediting_280146ENST00000435508.5chr3_49488677_+-289.00-289.40-293.00
CAediting_280147ENST00000435508.5chr3_49488696_+-288.70-289.40-293.00
CAediting_280148ENST00000435508.5chr3_49488703_+-289.10-289.40-293.00
CAediting_280149ENST00000435508.5chr3_49488720_+-290.10-289.40-293.00
CAediting_280150ENST00000435508.5chr3_49488729_+-289.60-289.40-293.00
CAediting_280151ENST00000435508.5chr3_49488742_+-292.50-289.40-293.00
CAediting_280148ENST00000496474.1chr3_49488703_+-200.70-197.80-203.20
CAediting_280149ENST00000496474.1chr3_49488720_+-198.00-197.80-203.20
CAediting_280150ENST00000496474.1chr3_49488729_+-197.30-197.80-203.20
CAediting_280151ENST00000496474.1chr3_49488742_+-201.20-197.80-203.20

Top

Relation with ADAR for DAG1

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)

Top

Relation with cancer stages for DAG1

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

Top

Relation with survival for DAG1

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

Top

RelatedDrugs for DAG1

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

Top

RelatedDiseases for DAG1

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource
DAG1C3151184MUSCULAR DYSTROPHY-DYSTROGLYCANOPATHY (LIMB-GIRDLE), TYPE C, 96CTD_human;GENOMICS_ENGLAND;ORPHANET;UNIPROT
DAG1C4225291MUSCULAR DYSTROPHY-DYSTROGLYCANOPATHY (CONGENITAL WITH BRAIN AND EYE ANOMALIES), TYPE A, 94GENOMICS_ENGLAND;UNIPROT
DAG1C0265221Walker-Warburg congenital muscular dystrophy3CTD_human;GENOMICS_ENGLAND;ORPHANET
DAG1C0023092Lassa Fever1CTD_human
DAG1C0033578Prostatic Neoplasms1CTD_human
DAG1C0376358Malignant neoplasm of prostate1CTD_human
DAG1C0686353Muscular Dystrophies, Limb-Girdle1GENOMICS_ENGLAND
DAG1C0699743Congenital muscular dystrophy (disorder)1GENOMICS_ENGLAND