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Editing gene: AP2A1 (CAeditome ID:160)

Gene summary for AP2A1

Gene summary

Gene information	Gene symbol	AP2A1
	Gene ID	160
	Gene name	adaptor related protein complex 2 subunit alpha 1
	Synonyms	ADTAA\|AP2-ALPHA\|CLAPA1
	Cytomap	19q13.33
	Type of gene	protein-coding
	Description	AP-2 complex subunit alpha-1100 kDa coated vesicle protein Aadapter-related protein complex 2 alpha-1 subunitadapter-related protein complex 2 subunit alpha-1adaptin, alpha Aadaptor protein complex AP-2 subunit alpha-1adaptor related protein complex
	Modification date	20210518
	UniProtAcc	O95782
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
AP2A1	GO:0072583	AP-2 complex subunit alpha-1	23676497
AP2A1	GO:1900126	AP-2 complex subunit alpha-1	24251095
AP2A1	GO:0030122	AP-2 complex subunit alpha-1	23676497

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RNA A-to-I events for AP2A1

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000196961.11

RNA A-to-I editing events in Cancer.

CAediting_1376926(49769898, +), CAediting_1376927(49769969, +), CAediting_1376928(49769972, +), CAediting_1376929(49769973, +), CAediting_1376930(49770049, +), CAediting_1376931(49770097, +), CAediting_1376932(49770871, +), CAediting_1376933(49770945, +), CAediting_1376934(49770946, +), CAediting_1376935(49770991, +), CAediting_1376936(49771061, +), CAediting_1376937(49771074, +), CAediting_1376938(49771086, +), CAediting_1376939(49771119, +), CAediting_1376940(49771212, +), CAediting_1376941(49771222, +), CAediting_1376942(49771229, +), CAediting_1376943(49771231, +), CAediting_1376944(49771239, +), CAediting_1376945(49771258, +), CAediting_1376946(49771268, +), CAediting_1376947(49771483, +), CAediting_1376948(49771502, +), CAediting_1376949(49771508, +), CAediting_1376950(49772083, +), CAediting_1376951(49775033, +), CAediting_1376952(49775148, +), CAediting_1376953(49775153, +), CAediting_1376954(49775515, +), CAediting_1376955(49775577, +), CAediting_1376956(49775608, +), CAediting_1376957(49775623, +), CAediting_1376958(49775638, +), CAediting_1376959(49775665, +), CAediting_1376960(49775677, +), CAediting_1376961(49775699, +), CAediting_1376962(49777019, +), CAediting_1376963(49777027, +), CAediting_1376964(49777029, +), CAediting_1376965(49777043, +), CAediting_1376966(49777053, +), CAediting_1376967(49777114, +), CAediting_1376968(49777115, +), CAediting_1376969(49777120, +), CAediting_1376970(49777547, +), CAediting_1376971(49777576, +), CAediting_1376972(49777641, +), CAediting_1376973(49777747, +), CAediting_1376974(49777750, +), CAediting_1376975(49777763, +), CAediting_1376976(49777766, +), CAediting_1376977(49778436, +), CAediting_1376978(49778472, +), CAediting_1376979(49778476, +), CAediting_1376980(49778498, +), CAediting_1376981(49778528, +), CAediting_1376982(49778982, +), CAediting_1376983(49779422, +), CAediting_1376984(49779431, +), CAediting_1376985(49783388, +), CAediting_1376986(49797447, +), CAediting_1376987(49797453, +), CAediting_1376988(49797492, +), CAediting_1376989(49797496, +), CAediting_1376990(49797498, +), CAediting_1376991(49797546, +), CAediting_1376992(49797554, +), CAediting_1376993(49797619, +), CAediting_1376994(49797636, +), CAediting_1376995(49797676, +), CAediting_1376996(49800739, +), CAediting_1376997(49803963, +), CAediting_1376998(49803975, +), CAediting_1376999(49803981, +), CAediting_1377000(49803982, +), CAediting_1377001(49804007, +), CAediting_1377002(49804020, +), CAediting_1377003(49804033, +), CAediting_1377004(49804034, +), CAediting_1377005(49804049, +), CAediting_1377006(49804059, +), CAediting_1377007(49804073, +), CAediting_1377008(49804088, +), CAediting_1377009(49804099, +), CAediting_1377010(49804115, +), CAediting_1377011(49804116, +), CAediting_1377012(49804121, +), CAediting_1377013(49804125, +), CAediting_1377014(49804132, +), CAediting_1377015(49804138, +), CAediting_1377016(49804145, +), CAediting_1377017(49804156, +), CAediting_1377018(49804181, +), CAediting_1377019(49804193, +), CAediting_1377020(49804199, +), CAediting_1377021(49804237, +), CAediting_1377022(49804239, +), CAediting_1377023(49804242, +), CAediting_1377024(49804268, +), CAediting_1377025(49804286, +), CAediting_1377026(49804287, +), CAediting_1377027(49804295, +), CAediting_1377028(49804301, +), CAediting_1377029(49804308, +), CAediting_1377030(49804322, +), CAediting_1377031(49804330, +), CAediting_1377032(49804354, +), CAediting_1377033(49804363, +), CAediting_1377034(49804364, +), CAediting_1377035(49804394, +), CAediting_1377036(49804420, +), CAediting_1377037(49804426, +), CAediting_1377038(49804461, +), CAediting_1377039(49804462, +), CAediting_1377040(49804466, +), CAediting_1377041(49804802, +), CAediting_1377042(49804803, +), CAediting_1377043(49804804, +), CAediting_1377044(49804842, +), CAediting_1377045(49804843, +), CAediting_1377046(49804844, +), CAediting_1377047(49804873, +), CAediting_1377048(49804930, +), CAediting_1377049(49804932, +), CAediting_1377050(49804934, +), CAediting_1377051(49804942, +), CAediting_1377052(49804946, +), CAediting_1377053(49804958, +), CAediting_1377054(49804981, +), CAediting_1377055(49804986, +), CAediting_1377056(49804993, +), CAediting_1377057(49805006, +), CAediting_1377058(49805024, +), CAediting_1377059(49805032, +), CAediting_1377060(49805033, +), CAediting_1377061(49805036, +), CAediting_1377062(49805046, +), CAediting_1377063(49805072, +), CAediting_1377064(49805083, +),

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RNA editing positional annotations for AP2A1 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1376926	chr19_49769898_+	ncRNA_intronic
CAediting_1376927	chr19_49769969_+	ncRNA_intronic
CAediting_1376928	chr19_49769972_+	ncRNA_intronic
CAediting_1376929	chr19_49769973_+	ncRNA_intronic
CAediting_1376930	chr19_49770049_+	ncRNA_intronic
CAediting_1376931	chr19_49770097_+	ncRNA_intronic
CAediting_1376932	chr19_49770871_+	ncRNA_intronic
CAediting_1376933	chr19_49770945_+	ncRNA_intronic
CAediting_1376934	chr19_49770946_+	ncRNA_intronic
CAediting_1376935	chr19_49770991_+	ncRNA_intronic
CAediting_1376936	chr19_49771061_+	ncRNA_intronic
CAediting_1376937	chr19_49771074_+	ncRNA_intronic
CAediting_1376938	chr19_49771086_+	ncRNA_intronic
CAediting_1376939	chr19_49771119_+	ncRNA_intronic
CAediting_1376940	chr19_49771212_+	ncRNA_intronic
CAediting_1376941	chr19_49771222_+	ncRNA_intronic
CAediting_1376942	chr19_49771229_+	ncRNA_intronic
CAediting_1376943	chr19_49771231_+	ncRNA_intronic
CAediting_1376944	chr19_49771239_+	ncRNA_intronic
CAediting_1376945	chr19_49771258_+	ncRNA_intronic
CAediting_1376946	chr19_49771268_+	ncRNA_intronic
CAediting_1376947	chr19_49771483_+	ncRNA_intronic
CAediting_1376948	chr19_49771502_+	ncRNA_intronic
CAediting_1376949	chr19_49771508_+	ncRNA_intronic
CAediting_1376950	chr19_49772083_+	ncRNA_intronic
CAediting_1376951	chr19_49775033_+	ncRNA_intronic
CAediting_1376952	chr19_49775148_+	ncRNA_intronic
CAediting_1376953	chr19_49775153_+	ncRNA_intronic
CAediting_1376954	chr19_49775515_+	ncRNA_intronic
CAediting_1376955	chr19_49775577_+	ncRNA_intronic
CAediting_1376956	chr19_49775608_+	ncRNA_intronic
CAediting_1376957	chr19_49775623_+	ncRNA_intronic
CAediting_1376958	chr19_49775638_+	ncRNA_intronic
CAediting_1376959	chr19_49775665_+	ncRNA_intronic
CAediting_1376960	chr19_49775677_+	ncRNA_intronic
CAediting_1376961	chr19_49775699_+	ncRNA_intronic
CAediting_1376962	chr19_49777019_+	ncRNA_intronic
CAediting_1376963	chr19_49777027_+	ncRNA_intronic
CAediting_1376964	chr19_49777029_+	ncRNA_intronic
CAediting_1376965	chr19_49777043_+	ncRNA_intronic
CAediting_1376966	chr19_49777053_+	ncRNA_intronic
CAediting_1376967	chr19_49777114_+	ncRNA_intronic
CAediting_1376968	chr19_49777115_+	ncRNA_intronic
CAediting_1376969	chr19_49777120_+	ncRNA_intronic
CAediting_1376970	chr19_49777547_+	ncRNA_intronic
CAediting_1376971	chr19_49777576_+	ncRNA_intronic
CAediting_1376972	chr19_49777641_+	ncRNA_intronic
CAediting_1376973	chr19_49777747_+	ncRNA_intronic
CAediting_1376974	chr19_49777750_+	ncRNA_intronic
CAediting_1376975	chr19_49777763_+	ncRNA_intronic
CAediting_1376976	chr19_49777766_+	ncRNA_intronic
CAediting_1376977	chr19_49778436_+	ncRNA_intronic
CAediting_1376978	chr19_49778472_+	ncRNA_intronic
CAediting_1376979	chr19_49778476_+	ncRNA_intronic
CAediting_1376980	chr19_49778498_+	ncRNA_intronic
CAediting_1376981	chr19_49778528_+	ncRNA_intronic
CAediting_1376982	chr19_49778982_+	ncRNA_intronic
CAediting_1376983	chr19_49779422_+	ncRNA_intronic
CAediting_1376984	chr19_49779431_+	ncRNA_intronic
CAediting_1376985	chr19_49783388_+	ncRNA_intronic
CAediting_1376986	chr19_49797447_+	ncRNA_exonic
CAediting_1376987	chr19_49797453_+	ncRNA_exonic
CAediting_1376988	chr19_49797492_+	ncRNA_exonic
CAediting_1376989	chr19_49797496_+	ncRNA_exonic
CAediting_1376990	chr19_49797498_+	ncRNA_exonic
CAediting_1376991	chr19_49797546_+	ncRNA_exonic
CAediting_1376992	chr19_49797554_+	ncRNA_exonic
CAediting_1376993	chr19_49797619_+	intronic
CAediting_1376994	chr19_49797636_+	intronic
CAediting_1376995	chr19_49797676_+	intronic
CAediting_1376996	chr19_49800739_+	ncRNA_exonic
CAediting_1376997	chr19_49803963_+	ncRNA_exonic
CAediting_1376998	chr19_49803975_+	ncRNA_exonic
CAediting_1376999	chr19_49803981_+	ncRNA_exonic
CAediting_1377000	chr19_49803982_+	ncRNA_exonic
CAediting_1377001	chr19_49804007_+	ncRNA_exonic
CAediting_1377002	chr19_49804020_+	ncRNA_exonic
CAediting_1377003	chr19_49804033_+	ncRNA_exonic
CAediting_1377004	chr19_49804034_+	ncRNA_exonic
CAediting_1377005	chr19_49804049_+	ncRNA_exonic
CAediting_1377006	chr19_49804059_+	ncRNA_exonic
CAediting_1377007	chr19_49804073_+	ncRNA_exonic
CAediting_1377008	chr19_49804088_+	ncRNA_exonic
CAediting_1377009	chr19_49804099_+	ncRNA_exonic
CAediting_1377010	chr19_49804115_+	ncRNA_exonic
CAediting_1377011	chr19_49804116_+	ncRNA_exonic
CAediting_1377012	chr19_49804121_+	ncRNA_exonic
CAediting_1377013	chr19_49804125_+	ncRNA_exonic
CAediting_1377014	chr19_49804132_+	ncRNA_exonic
CAediting_1377015	chr19_49804138_+	ncRNA_exonic
CAediting_1377016	chr19_49804145_+	ncRNA_exonic
CAediting_1377017	chr19_49804156_+	ncRNA_exonic
CAediting_1377018	chr19_49804181_+	ncRNA_exonic
CAediting_1377019	chr19_49804193_+	ncRNA_exonic
CAediting_1377020	chr19_49804199_+	ncRNA_exonic
CAediting_1377021	chr19_49804237_+	ncRNA_exonic
CAediting_1377022	chr19_49804239_+	ncRNA_exonic
CAediting_1377023	chr19_49804242_+	ncRNA_exonic
CAediting_1377024	chr19_49804268_+	ncRNA_exonic
CAediting_1377025	chr19_49804286_+	ncRNA_exonic
CAediting_1377026	chr19_49804287_+	ncRNA_exonic
CAediting_1377027	chr19_49804295_+	ncRNA_exonic
CAediting_1377028	chr19_49804301_+	ncRNA_exonic
CAediting_1377029	chr19_49804308_+	ncRNA_exonic
CAediting_1377030	chr19_49804322_+	ncRNA_exonic
CAediting_1377031	chr19_49804330_+	ncRNA_exonic
CAediting_1377032	chr19_49804354_+	ncRNA_exonic
CAediting_1377033	chr19_49804363_+	ncRNA_exonic
CAediting_1377034	chr19_49804364_+	ncRNA_exonic
CAediting_1377035	chr19_49804394_+	ncRNA_exonic
CAediting_1377036	chr19_49804420_+	ncRNA_exonic
CAediting_1377037	chr19_49804426_+	ncRNA_exonic
CAediting_1377038	chr19_49804461_+	ncRNA_exonic
CAediting_1377039	chr19_49804462_+	ncRNA_exonic
CAediting_1377040	chr19_49804466_+	ncRNA_exonic
CAediting_1377041	chr19_49804802_+	ncRNA_intronic
CAediting_1377042	chr19_49804803_+	ncRNA_intronic
CAediting_1377043	chr19_49804804_+	ncRNA_intronic
CAediting_1377044	chr19_49804842_+	ncRNA_intronic
CAediting_1377045	chr19_49804843_+	ncRNA_intronic
CAediting_1377046	chr19_49804844_+	ncRNA_intronic
CAediting_1377047	chr19_49804873_+	ncRNA_intronic
CAediting_1377048	chr19_49804930_+	ncRNA_exonic
CAediting_1377049	chr19_49804932_+	ncRNA_exonic
CAediting_1377050	chr19_49804934_+	ncRNA_exonic
CAediting_1377051	chr19_49804942_+	ncRNA_exonic
CAediting_1377052	chr19_49804946_+	ncRNA_exonic
CAediting_1377053	chr19_49804958_+	ncRNA_exonic
CAediting_1377054	chr19_49804981_+	ncRNA_exonic
CAediting_1377055	chr19_49804986_+	ncRNA_exonic
CAediting_1377056	chr19_49804993_+	ncRNA_exonic
CAediting_1377057	chr19_49805006_+	ncRNA_exonic
CAediting_1377058	chr19_49805024_+	ncRNA_exonic
CAediting_1377059	chr19_49805032_+	ncRNA_exonic
CAediting_1377060	chr19_49805033_+	ncRNA_exonic
CAediting_1377061	chr19_49805036_+	ncRNA_exonic
CAediting_1377062	chr19_49805046_+	ncRNA_exonic
CAediting_1377063	chr19_49805072_+	ncRNA_exonic
CAediting_1377064	chr19_49805083_+	ncRNA_exonic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1376926	chr19_49769898_+	SINE	Alu	AluSx1
CAediting_1376927	chr19_49769969_+	SINE	Alu	AluSx1
CAediting_1376928	chr19_49769972_+	SINE	Alu	AluSx1
CAediting_1376929	chr19_49769973_+	SINE	Alu	AluSx1
CAediting_1376930	chr19_49770049_+	SINE	Alu	AluSx1
CAediting_1376931	chr19_49770097_+	SINE	Alu	AluSx1
CAediting_1376932	chr19_49770871_+	SINE	Alu	AluSx
CAediting_1376933	chr19_49770945_+	SINE	Alu	AluSx
CAediting_1376934	chr19_49770946_+	SINE	Alu	AluSx
CAediting_1376935	chr19_49770991_+	SINE	Alu	AluSx
CAediting_1376936	chr19_49771061_+	SINE	Alu	AluSx
CAediting_1376937	chr19_49771074_+	SINE	Alu	AluSx
CAediting_1376938	chr19_49771086_+	SINE	Alu	AluSx
CAediting_1376939	chr19_49771119_+	SINE	Alu	AluSx
CAediting_1376940	chr19_49771212_+	SINE	Alu	FLAM_A
CAediting_1376941	chr19_49771222_+	SINE	Alu	FLAM_A
CAediting_1376942	chr19_49771229_+	SINE	Alu	FLAM_A
CAediting_1376943	chr19_49771231_+	SINE	Alu	FLAM_A
CAediting_1376944	chr19_49771239_+	SINE	Alu	FLAM_A
CAediting_1376945	chr19_49771258_+	SINE	Alu	FLAM_A
CAediting_1376946	chr19_49771268_+	SINE	Alu	FLAM_A
CAediting_1376947	chr19_49771483_+	SINE	Alu	AluSq2
CAediting_1376948	chr19_49771502_+	SINE	Alu	AluSq2
CAediting_1376949	chr19_49771508_+	SINE	Alu	AluSq2
CAediting_1376950	chr19_49772083_+	SINE	Alu	AluJo
CAediting_1376951	chr19_49775033_+	SINE	Alu	AluJr4
CAediting_1376952	chr19_49775148_+	SINE	Alu	AluJr4
CAediting_1376953	chr19_49775153_+	SINE	Alu	AluJr4
CAediting_1376954	chr19_49775515_+	SINE	Alu	AluSz
CAediting_1376955	chr19_49775577_+	SINE	Alu	AluSz
CAediting_1376956	chr19_49775608_+	SINE	Alu	AluJb
CAediting_1376957	chr19_49775623_+	SINE	Alu	AluJb
CAediting_1376958	chr19_49775638_+	SINE	Alu	AluJb
CAediting_1376959	chr19_49775665_+	SINE	Alu	AluJb
CAediting_1376960	chr19_49775677_+	SINE	Alu	AluJb
CAediting_1376961	chr19_49775699_+	SINE	Alu	AluJb
CAediting_1376962	chr19_49777019_+	SINE	Alu	AluSx1
CAediting_1376963	chr19_49777027_+	SINE	Alu	AluSx1
CAediting_1376964	chr19_49777029_+	SINE	Alu	AluSx1
CAediting_1376965	chr19_49777043_+	SINE	Alu	AluSx1
CAediting_1376966	chr19_49777053_+	SINE	Alu	AluSx1
CAediting_1376967	chr19_49777114_+	SINE	Alu	AluSx1
CAediting_1376968	chr19_49777115_+	SINE	Alu	AluSx1
CAediting_1376969	chr19_49777120_+	SINE	Alu	AluSx1
CAediting_1376970	chr19_49777547_+	SINE	Alu	AluY
CAediting_1376971	chr19_49777576_+	SINE	Alu	AluY
CAediting_1376972	chr19_49777641_+	SINE	Alu	AluY
CAediting_1376973	chr19_49777747_+	SINE	Alu	AluJb
CAediting_1376974	chr19_49777750_+	SINE	Alu	AluJb
CAediting_1376975	chr19_49777763_+	SINE	Alu	AluJb
CAediting_1376976	chr19_49777766_+	SINE	Alu	AluJb
CAediting_1376977	chr19_49778436_+	SINE	Alu	AluSq2
CAediting_1376978	chr19_49778472_+	SINE	Alu	AluSq2
CAediting_1376979	chr19_49778476_+	SINE	Alu	AluSq2
CAediting_1376980	chr19_49778498_+	SINE	Alu	AluSq2
CAediting_1376981	chr19_49778528_+	SINE	Alu	AluSq2
CAediting_1376982	chr19_49778982_+	SINE	Alu	AluSz6
CAediting_1376983	chr19_49779422_+	SINE	Alu	AluSz6
CAediting_1376984	chr19_49779431_+	SINE	Alu	AluSz6
CAediting_1376985	chr19_49783388_+	SINE	Alu	AluJb
CAediting_1376986	chr19_49797447_+	SINE	Alu	AluJb
CAediting_1376987	chr19_49797453_+	SINE	Alu	AluJb
CAediting_1376988	chr19_49797492_+	SINE	Alu	AluJb
CAediting_1376989	chr19_49797496_+	SINE	Alu	AluJb
CAediting_1376990	chr19_49797498_+	SINE	Alu	AluJb
CAediting_1376991	chr19_49797546_+	SINE	Alu	AluJb
CAediting_1376992	chr19_49797554_+	SINE	Alu	AluJb
CAediting_1376993	chr19_49797619_+	SINE	Alu	AluJb
CAediting_1376994	chr19_49797636_+	SINE	Alu	AluJb
CAediting_1376995	chr19_49797676_+	SINE	Alu	AluJb
CAediting_1376996	chr19_49800739_+	SINE	Alu	AluSx
CAediting_1376997	chr19_49803963_+	SINE	Alu	AluSz
CAediting_1376998	chr19_49803975_+	SINE	Alu	AluSz
CAediting_1376999	chr19_49803981_+	SINE	Alu	AluSz
CAediting_1377000	chr19_49803982_+	SINE	Alu	AluSz
CAediting_1377001	chr19_49804007_+	SINE	Alu	AluSz
CAediting_1377002	chr19_49804020_+	SINE	Alu	AluSz
CAediting_1377003	chr19_49804033_+	SINE	Alu	AluSz
CAediting_1377004	chr19_49804034_+	SINE	Alu	AluSz
CAediting_1377005	chr19_49804049_+	SINE	Alu	AluSz
CAediting_1377006	chr19_49804059_+	SINE	Alu	AluSz
CAediting_1377007	chr19_49804073_+	SINE	Alu	AluSz
CAediting_1377008	chr19_49804088_+	SINE	Alu	AluSz
CAediting_1377009	chr19_49804099_+	SINE	Alu	AluSz
CAediting_1377010	chr19_49804115_+	SINE	Alu	AluSz
CAediting_1377011	chr19_49804116_+	SINE	Alu	AluSz
CAediting_1377012	chr19_49804121_+	SINE	Alu	AluSz
CAediting_1377013	chr19_49804125_+	SINE	Alu	AluSz
CAediting_1377014	chr19_49804132_+	SINE	Alu	AluSz
CAediting_1377015	chr19_49804138_+	SINE	Alu	AluSz
CAediting_1377016	chr19_49804145_+	SINE	Alu	AluSz
CAediting_1377017	chr19_49804156_+	SINE	Alu	AluSz
CAediting_1377018	chr19_49804181_+	SINE	Alu	AluSz
CAediting_1377019	chr19_49804193_+	SINE	Alu	AluSz
CAediting_1377020	chr19_49804199_+	SINE	Alu	AluSz
CAediting_1377021	chr19_49804237_+	SINE	Alu	AluSz
CAediting_1377022	chr19_49804239_+	SINE	Alu	AluSz
CAediting_1377023	chr19_49804242_+	SINE	Alu	AluSz
CAediting_1377024	chr19_49804268_+	SINE	Alu	AluY
CAediting_1377025	chr19_49804286_+	SINE	Alu	AluY
CAediting_1377026	chr19_49804287_+	SINE	Alu	AluY
CAediting_1377027	chr19_49804295_+	SINE	Alu	AluY
CAediting_1377028	chr19_49804301_+	SINE	Alu	AluY
CAediting_1377029	chr19_49804308_+	SINE	Alu	AluY
CAediting_1377030	chr19_49804322_+	SINE	Alu	AluY
CAediting_1377031	chr19_49804330_+	SINE	Alu	AluY
CAediting_1377032	chr19_49804354_+	SINE	Alu	AluY
CAediting_1377033	chr19_49804363_+	SINE	Alu	AluY
CAediting_1377034	chr19_49804364_+	SINE	Alu	AluY
CAediting_1377035	chr19_49804394_+	SINE	Alu	AluY
CAediting_1377036	chr19_49804420_+	SINE	Alu	AluY
CAediting_1377037	chr19_49804426_+	SINE	Alu	AluY
CAediting_1377038	chr19_49804461_+	SINE	Alu	AluY
CAediting_1377039	chr19_49804462_+	SINE	Alu	AluY
CAediting_1377040	chr19_49804466_+	SINE	Alu	AluY
CAediting_1377041	chr19_49804802_+	SINE	Alu	FLAM_C
CAediting_1377042	chr19_49804803_+	SINE	Alu	FLAM_C
CAediting_1377043	chr19_49804804_+	SINE	Alu	FLAM_C
CAediting_1377044	chr19_49804842_+	SINE	Alu	FLAM_C
CAediting_1377045	chr19_49804843_+	SINE	Alu	FLAM_C
CAediting_1377046	chr19_49804844_+	SINE	Alu	FLAM_C
CAediting_1377047	chr19_49804873_+	SINE	Alu	FLAM_C
CAediting_1377048	chr19_49804930_+	SINE	Alu	AluJo
CAediting_1377049	chr19_49804932_+	SINE	Alu	AluJo
CAediting_1377050	chr19_49804934_+	SINE	Alu	AluJo
CAediting_1377051	chr19_49804942_+	SINE	Alu	AluJo
CAediting_1377052	chr19_49804946_+	SINE	Alu	AluJo
CAediting_1377053	chr19_49804958_+	SINE	Alu	AluJo
CAediting_1377054	chr19_49804981_+	SINE	Alu	AluJo
CAediting_1377055	chr19_49804986_+	SINE	Alu	AluJo
CAediting_1377056	chr19_49804993_+	SINE	Alu	AluJo
CAediting_1377057	chr19_49805006_+	SINE	Alu	AluJo
CAediting_1377058	chr19_49805024_+	SINE	Alu	AluJo
CAediting_1377059	chr19_49805032_+	SINE	Alu	AluJo
CAediting_1377060	chr19_49805033_+	SINE	Alu	AluJo
CAediting_1377061	chr19_49805036_+	SINE	Alu	AluJo
CAediting_1377062	chr19_49805046_+	SINE	Alu	AluJo
CAediting_1377063	chr19_49805072_+	SINE	Alu	AluJo
CAediting_1377064	chr19_49805083_+	SINE	Alu	AluJo

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RNA A-to-I editing events in the alternative splicing sites for AP2A1

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000196961.11.AP2A1.

Correlation between RNA A-to-I editing and PSI for ENSG00000196961.11.AP2A1.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for AP2A1

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for AP2A1

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for AP2A1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_980496	chr14_31014685_-	ENSG00000196961.11	ENST00000359032	hsa-miR-624-3p	49807033	49807039	7mer-m8	49807020	49807040	140	-13.97
CAediting_393	chr1_1167164_+	ENSG00000196961.11	ENST00000597774	hsa-miR-200b-3p	49798887	49798893	7mer-m8	49798872	49798894	147	-12.93
CAediting_748296	chr10_51299626_+	ENSG00000196961.11	ENST00000597774	hsa-miR-605-3p	49799485	49799492	8mer-1a	49799470	49799492	153	-15.29
CAediting_688080	chr9_63819626_+	ENSG00000196961.11	ENST00000597774	hsa-miR-4477b	49799488	49799493	6mer	49799473	49799494	144	-17.16
CAediting_846604	chr11_93733708_-	ENSG00000196961.11	ENST00000597774	hsa-miR-1304-3p	49801567	49801573	7mer-m8	49801551	49801574	152	-20.38
CAediting_1351755	chr19_40282625_-	ENSG00000196961.11	ENST00000359032	hsa-miR-641	49807011	49807017	7mer-m8	49806995	49807018	140	-14.9
CAediting_1368054	chr19_46709310_-	ENSG00000196961.11	ENST00000597774	hsa-miR-320e	49799430	49799436	7mer-m8	49799420	49799437	142	-13.81
CAediting_396018	chr5_1062918_-	ENSG00000196961.11	ENST00000597774	hsa-miR-4635	49799488	49799494	7mer-m8	49799475	49799494	147	-13.06
CAediting_468389	chr6_31355314_-	ENSG00000196961.11	ENST00000597774	hsa-miR-6891-5p	49799666	49799672	7mer-m8	49799655	49799673	140	-16.39

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for AP2A1

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for AP2A1

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
ESCA	CAediting_1377011	chr19_49804116_+	.	.	0.0100265590795871	0.305854574671241	.	.
STAD	CAediting_1377020	chr19_49804199_+	.	.	.	.	0.012976934145781	0.336051786028335
STAD	CAediting_1377026	chr19_49804287_+	.	.	0.0332774752953362	0.295750716863942	.	.

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Relation with cancer stages for AP2A1

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
BLCA	pathologic_stage	CAediting_1377050	chr19_49804934_+	0.00329820351520591	0.328725748755885
LUSC	pathologic_stage	CAediting_1377050	chr19_49804934_+	0.00876893100401048	0.300652509425267

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Relation with survival for AP2A1

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for AP2A1

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for AP2A1

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene