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Editing gene: NXNL2 (CAeditome ID:158046)

Gene summary for NXNL2

Gene summary

Gene information	Gene symbol	NXNL2
	Gene ID	158046
	Gene name	nucleoredoxin like 2
	Synonyms	C9orf121\|RDCVF2\|RdCVF2L
	Cytomap	9q22.1
	Type of gene	protein-coding
	Description	nucleoredoxin-like protein 2rod-derived cone viability factor 2
	Modification date	20210518
	UniProtAcc	Q5VZ03
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for NXNL2

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000130045.14

RNA A-to-I editing events in Cancer.

CAediting_693640(88539744, +), CAediting_693641(88539757, +), CAediting_693642(88539787, +), CAediting_693643(88539788, +), CAediting_693644(88539805, +), CAediting_693645(88539817, +), CAediting_693646(88539829, +), CAediting_693647(88539833, +), CAediting_693648(88539845, +), CAediting_693649(88539853, +), CAediting_693650(88539854, +), CAediting_693651(88539862, +), CAediting_693652(88539905, +), CAediting_693653(88539922, +), CAediting_693654(88539926, +), CAediting_693655(88539944, +), CAediting_693656(88539945, +), CAediting_693657(88539951, +), CAediting_693658(88539957, +), CAediting_693659(88539959, +), CAediting_693660(88540077, +), CAediting_693661(88540078, +), CAediting_693662(88540083, +), CAediting_693663(88540155, +), CAediting_693664(88540175, +), CAediting_693665(88540185, +), CAediting_693666(88540221, +), CAediting_693667(88540238, +), CAediting_693668(88540252, +), CAediting_693669(88540277, +), CAediting_693670(88540282, +), CAediting_693671(88540302, +), CAediting_693672(88540314, +), CAediting_693673(88541015, +), CAediting_693674(88541046, +), CAediting_693675(88541284, +), CAediting_693676(88541330, +), CAediting_693677(88541360, +), CAediting_693678(88541361, +), CAediting_693679(88541365, +), CAediting_693680(88541378, +), CAediting_693681(88541387, +), CAediting_693682(88541402, +), CAediting_693683(88541450, +), CAediting_693684(88541514, +), CAediting_693685(88541521, +), CAediting_693686(88541522, +), CAediting_693687(88541523, +), CAediting_693688(88541535, +), CAediting_693689(88541544, +), CAediting_693690(88541975, +), CAediting_693691(88541976, +), CAediting_693692(88542002, +), CAediting_693693(88542178, +), CAediting_693694(88542198, +), CAediting_693695(88542220, +), CAediting_693696(88542221, +), CAediting_693697(88542228, +), CAediting_693698(88542300, +), CAediting_693699(88542320, +), CAediting_693700(88542328, +), CAediting_693701(88542363, +), CAediting_693702(88542368, +), CAediting_693703(88542388, +), CAediting_693704(88542389, +), CAediting_693705(88542392, +), CAediting_693706(88542393, +), CAediting_693707(88542414, +), CAediting_693708(88542428, +), CAediting_693709(88542430, +), CAediting_693710(88542431, +), CAediting_693711(88542432, +), CAediting_693712(88542454, +), CAediting_693713(88542464, +), CAediting_693714(88542470, +), CAediting_693715(88542473, +), CAediting_693716(88542475, +), CAediting_693717(88542479, +), CAediting_693718(88542510, +), CAediting_693719(88542512, +), CAediting_693720(88542524, +), CAediting_693721(88542527, +), CAediting_693722(88542540, +), CAediting_693723(88542548, +), CAediting_693724(88542549, +), CAediting_693725(88542550, +), CAediting_693726(88542562, +), CAediting_693727(88543290, +), CAediting_693728(88543293, +), CAediting_693729(88543294, +), CAediting_693730(88543318, +), CAediting_693731(88543324, +), CAediting_693732(88543328, +), CAediting_693733(88543331, +), CAediting_693734(88543332, +), CAediting_693735(88543346, +), CAediting_693736(88543353, +), CAediting_693737(88543366, +), CAediting_693738(88543367, +), CAediting_693739(88543371, +), CAediting_693740(88543379, +), CAediting_693741(88543384, +), CAediting_693742(88543396, +), CAediting_693743(88543406, +), CAediting_693744(88543408, +), CAediting_693745(88543414, +), CAediting_693746(88543449, +), CAediting_693747(88543451, +), CAediting_693748(88543456, +), CAediting_693749(88543463, +), CAediting_693750(88543475, +), CAediting_693751(88543487, +), CAediting_693752(88543488, +), CAediting_693753(88543501, +), CAediting_693754(88543513, +), CAediting_693755(88543518, +), CAediting_693756(88543528, +), CAediting_693757(88543558, +), CAediting_693758(88543905, +), CAediting_693759(88543915, +), CAediting_693760(88543936, +), CAediting_693761(88543937, +), CAediting_693762(88543945, +), CAediting_693763(88543950, +), CAediting_693764(88543993, +), CAediting_693765(88543994, +), CAediting_693766(88543999, +), CAediting_693767(88544005, +), CAediting_693768(88544008, +), CAediting_693769(88544009, +), CAediting_693770(88544011, +), CAediting_693771(88544012, +), CAediting_693772(88544014, +), CAediting_693773(88544019, +), CAediting_693774(88544020, +), CAediting_693775(88544021, +), CAediting_693776(88544024, +), CAediting_693777(88544042, +), CAediting_693778(88544044, +), CAediting_693779(88544051, +), CAediting_693780(88544056, +), CAediting_693781(88544060, +), CAediting_693782(88544073, +), CAediting_693783(88544077, +), CAediting_693784(88544082, +), CAediting_693785(88544083, +), CAediting_693786(88544091, +), CAediting_693787(88544092, +), CAediting_693788(88544099, +), CAediting_693789(88544121, +), CAediting_693790(88544153, +), CAediting_693791(88544154, +), CAediting_693792(88544157, +), CAediting_693793(88544162, +), CAediting_693794(88546595, +), CAediting_693795(88547870, +), CAediting_693796(88547874, +), CAediting_693797(88547890, +), CAediting_693798(88547906, +), CAediting_693799(88547923, +), CAediting_693800(88547929, +), CAediting_693801(88547941, +), CAediting_693802(88548100, +), CAediting_693803(88548288, +), CAediting_693804(88548430, +), CAediting_693805(88548567, +), CAediting_693806(88553225, +), CAediting_693807(88553226, +), CAediting_693808(88553267, +), CAediting_693809(88554318, +), CAediting_693810(88556889, +), CAediting_693811(88556890, +), CAediting_693812(88556900, +), CAediting_693813(88556934, +), CAediting_693814(88556950, +), CAediting_693815(88556974, +), CAediting_693816(88562606, +), CAediting_693817(88562631, +), CAediting_693818(88562632, +), CAediting_693819(88573206, +), CAediting_693820(88573213, +), CAediting_693821(88573223, +), CAediting_693822(88573243, +), CAediting_693823(88575507, +), CAediting_693824(88580423, +), CAediting_693825(88581507, +), CAediting_693826(88582730, +), CAediting_693827(88582743, +), CAediting_693828(88582833, +), CAediting_693829(88582848, +), CAediting_693830(88582853, +), CAediting_693831(88582930, +), CAediting_693832(88582942, +),

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RNA editing positional annotations for NXNL2 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_693640	chr9_88539744_+	exonic
CAediting_693641	chr9_88539757_+	exonic
CAediting_693642	chr9_88539787_+	exonic
CAediting_693643	chr9_88539788_+	exonic
CAediting_693644	chr9_88539805_+	exonic
CAediting_693645	chr9_88539817_+	ncRNA_intronic
CAediting_693646	chr9_88539829_+	ncRNA_intronic
CAediting_693647	chr9_88539833_+	ncRNA_intronic
CAediting_693648	chr9_88539845_+	ncRNA_intronic
CAediting_693649	chr9_88539853_+	ncRNA_intronic
CAediting_693650	chr9_88539854_+	ncRNA_intronic
CAediting_693651	chr9_88539862_+	ncRNA_intronic
CAediting_693652	chr9_88539905_+	ncRNA_intronic
CAediting_693653	chr9_88539922_+	ncRNA_intronic
CAediting_693654	chr9_88539926_+	ncRNA_intronic
CAediting_693655	chr9_88539944_+	ncRNA_intronic
CAediting_693656	chr9_88539945_+	ncRNA_intronic
CAediting_693657	chr9_88539951_+	ncRNA_intronic
CAediting_693658	chr9_88539957_+	ncRNA_intronic
CAediting_693659	chr9_88539959_+	ncRNA_intronic
CAediting_693660	chr9_88540077_+	ncRNA_intronic
CAediting_693661	chr9_88540078_+	ncRNA_intronic
CAediting_693662	chr9_88540083_+	ncRNA_intronic
CAediting_693663	chr9_88540155_+	ncRNA_intronic
CAediting_693664	chr9_88540175_+	ncRNA_intronic
CAediting_693665	chr9_88540185_+	ncRNA_intronic
CAediting_693666	chr9_88540221_+	ncRNA_intronic
CAediting_693667	chr9_88540238_+	ncRNA_intronic
CAediting_693668	chr9_88540252_+	ncRNA_intronic
CAediting_693669	chr9_88540277_+	ncRNA_intronic
CAediting_693670	chr9_88540282_+	ncRNA_intronic
CAediting_693671	chr9_88540302_+	ncRNA_intronic
CAediting_693672	chr9_88540314_+	ncRNA_intronic
CAediting_693673	chr9_88541015_+	ncRNA_intronic
CAediting_693674	chr9_88541046_+	ncRNA_intronic
CAediting_693675	chr9_88541284_+	ncRNA_intronic
CAediting_693676	chr9_88541330_+	ncRNA_intronic
CAediting_693677	chr9_88541360_+	ncRNA_intronic
CAediting_693678	chr9_88541361_+	ncRNA_intronic
CAediting_693679	chr9_88541365_+	ncRNA_intronic
CAediting_693680	chr9_88541378_+	ncRNA_intronic
CAediting_693681	chr9_88541387_+	ncRNA_intronic
CAediting_693682	chr9_88541402_+	ncRNA_intronic
CAediting_693683	chr9_88541450_+	ncRNA_intronic
CAediting_693684	chr9_88541514_+	ncRNA_intronic
CAediting_693685	chr9_88541521_+	ncRNA_intronic
CAediting_693686	chr9_88541522_+	ncRNA_intronic
CAediting_693687	chr9_88541523_+	ncRNA_intronic
CAediting_693688	chr9_88541535_+	ncRNA_intronic
CAediting_693689	chr9_88541544_+	ncRNA_intronic
CAediting_693690	chr9_88541975_+	ncRNA_intronic
CAediting_693691	chr9_88541976_+	ncRNA_intronic
CAediting_693692	chr9_88542002_+	ncRNA_intronic
CAediting_693693	chr9_88542178_+	ncRNA_intronic
CAediting_693694	chr9_88542198_+	ncRNA_intronic
CAediting_693695	chr9_88542220_+	ncRNA_intronic
CAediting_693696	chr9_88542221_+	ncRNA_intronic
CAediting_693697	chr9_88542228_+	ncRNA_intronic
CAediting_693698	chr9_88542300_+	ncRNA_intronic
CAediting_693699	chr9_88542320_+	ncRNA_intronic
CAediting_693700	chr9_88542328_+	ncRNA_intronic
CAediting_693701	chr9_88542363_+	ncRNA_intronic
CAediting_693702	chr9_88542368_+	ncRNA_intronic
CAediting_693703	chr9_88542388_+	ncRNA_intronic
CAediting_693704	chr9_88542389_+	ncRNA_intronic
CAediting_693705	chr9_88542392_+	ncRNA_intronic
CAediting_693706	chr9_88542393_+	ncRNA_intronic
CAediting_693707	chr9_88542414_+	ncRNA_intronic
CAediting_693708	chr9_88542428_+	ncRNA_intronic
CAediting_693709	chr9_88542430_+	ncRNA_intronic
CAediting_693710	chr9_88542431_+	ncRNA_intronic
CAediting_693711	chr9_88542432_+	ncRNA_intronic
CAediting_693712	chr9_88542454_+	ncRNA_intronic
CAediting_693713	chr9_88542464_+	ncRNA_intronic
CAediting_693714	chr9_88542470_+	ncRNA_intronic
CAediting_693715	chr9_88542473_+	ncRNA_intronic
CAediting_693716	chr9_88542475_+	ncRNA_intronic
CAediting_693717	chr9_88542479_+	ncRNA_intronic
CAediting_693718	chr9_88542510_+	ncRNA_intronic
CAediting_693719	chr9_88542512_+	ncRNA_intronic
CAediting_693720	chr9_88542524_+	ncRNA_intronic
CAediting_693721	chr9_88542527_+	ncRNA_intronic
CAediting_693722	chr9_88542540_+	ncRNA_intronic
CAediting_693723	chr9_88542548_+	ncRNA_intronic
CAediting_693724	chr9_88542549_+	ncRNA_intronic
CAediting_693725	chr9_88542550_+	ncRNA_intronic
CAediting_693726	chr9_88542562_+	ncRNA_intronic
CAediting_693727	chr9_88543290_+	ncRNA_intronic
CAediting_693728	chr9_88543293_+	ncRNA_intronic
CAediting_693729	chr9_88543294_+	ncRNA_intronic
CAediting_693730	chr9_88543318_+	ncRNA_intronic
CAediting_693731	chr9_88543324_+	ncRNA_intronic
CAediting_693732	chr9_88543328_+	ncRNA_intronic
CAediting_693733	chr9_88543331_+	ncRNA_intronic
CAediting_693734	chr9_88543332_+	ncRNA_intronic
CAediting_693735	chr9_88543346_+	ncRNA_intronic
CAediting_693736	chr9_88543353_+	ncRNA_intronic
CAediting_693737	chr9_88543366_+	ncRNA_intronic
CAediting_693738	chr9_88543367_+	ncRNA_intronic
CAediting_693739	chr9_88543371_+	ncRNA_intronic
CAediting_693740	chr9_88543379_+	ncRNA_intronic
CAediting_693741	chr9_88543384_+	ncRNA_intronic
CAediting_693742	chr9_88543396_+	ncRNA_intronic
CAediting_693743	chr9_88543406_+	ncRNA_intronic
CAediting_693744	chr9_88543408_+	ncRNA_intronic
CAediting_693745	chr9_88543414_+	ncRNA_intronic
CAediting_693746	chr9_88543449_+	ncRNA_intronic
CAediting_693747	chr9_88543451_+	ncRNA_intronic
CAediting_693748	chr9_88543456_+	ncRNA_intronic
CAediting_693749	chr9_88543463_+	ncRNA_intronic
CAediting_693750	chr9_88543475_+	ncRNA_intronic
CAediting_693751	chr9_88543487_+	ncRNA_intronic
CAediting_693752	chr9_88543488_+	ncRNA_intronic
CAediting_693753	chr9_88543501_+	ncRNA_intronic
CAediting_693754	chr9_88543513_+	ncRNA_intronic
CAediting_693755	chr9_88543518_+	ncRNA_intronic
CAediting_693756	chr9_88543528_+	ncRNA_intronic
CAediting_693757	chr9_88543558_+	ncRNA_intronic
CAediting_693758	chr9_88543905_+	ncRNA_intronic
CAediting_693759	chr9_88543915_+	ncRNA_intronic
CAediting_693760	chr9_88543936_+	ncRNA_intronic
CAediting_693761	chr9_88543937_+	ncRNA_intronic
CAediting_693762	chr9_88543945_+	ncRNA_intronic
CAediting_693763	chr9_88543950_+	ncRNA_intronic
CAediting_693764	chr9_88543993_+	ncRNA_intronic
CAediting_693765	chr9_88543994_+	ncRNA_intronic
CAediting_693766	chr9_88543999_+	ncRNA_intronic
CAediting_693767	chr9_88544005_+	ncRNA_intronic
CAediting_693768	chr9_88544008_+	ncRNA_intronic
CAediting_693769	chr9_88544009_+	ncRNA_intronic
CAediting_693770	chr9_88544011_+	ncRNA_intronic
CAediting_693771	chr9_88544012_+	ncRNA_intronic
CAediting_693772	chr9_88544014_+	ncRNA_intronic
CAediting_693773	chr9_88544019_+	ncRNA_intronic
CAediting_693774	chr9_88544020_+	ncRNA_intronic
CAediting_693775	chr9_88544021_+	ncRNA_intronic
CAediting_693776	chr9_88544024_+	ncRNA_intronic
CAediting_693777	chr9_88544042_+	ncRNA_intronic
CAediting_693778	chr9_88544044_+	ncRNA_intronic
CAediting_693779	chr9_88544051_+	ncRNA_intronic
CAediting_693780	chr9_88544056_+	ncRNA_intronic
CAediting_693781	chr9_88544060_+	ncRNA_intronic
CAediting_693782	chr9_88544073_+	ncRNA_intronic
CAediting_693783	chr9_88544077_+	ncRNA_intronic
CAediting_693784	chr9_88544082_+	ncRNA_intronic
CAediting_693785	chr9_88544083_+	ncRNA_intronic
CAediting_693786	chr9_88544091_+	ncRNA_intronic
CAediting_693787	chr9_88544092_+	ncRNA_intronic
CAediting_693788	chr9_88544099_+	ncRNA_intronic
CAediting_693789	chr9_88544121_+	ncRNA_intronic
CAediting_693790	chr9_88544153_+	ncRNA_intronic
CAediting_693791	chr9_88544154_+	ncRNA_intronic
CAediting_693792	chr9_88544157_+	ncRNA_intronic
CAediting_693793	chr9_88544162_+	ncRNA_intronic
CAediting_693794	chr9_88546595_+	ncRNA_intronic
CAediting_693795	chr9_88547870_+	ncRNA_intronic
CAediting_693796	chr9_88547874_+	ncRNA_intronic
CAediting_693797	chr9_88547890_+	ncRNA_intronic
CAediting_693798	chr9_88547906_+	ncRNA_intronic
CAediting_693799	chr9_88547923_+	ncRNA_intronic
CAediting_693800	chr9_88547929_+	ncRNA_intronic
CAediting_693801	chr9_88547941_+	ncRNA_intronic
CAediting_693802	chr9_88548100_+	ncRNA_intronic
CAediting_693803	chr9_88548288_+	ncRNA_intronic
CAediting_693804	chr9_88548430_+	ncRNA_intronic
CAediting_693805	chr9_88548567_+	ncRNA_intronic
CAediting_693806	chr9_88553225_+	ncRNA_intronic
CAediting_693807	chr9_88553226_+	ncRNA_intronic
CAediting_693808	chr9_88553267_+	ncRNA_intronic
CAediting_693809	chr9_88554318_+	ncRNA_intronic
CAediting_693810	chr9_88556889_+	ncRNA_intronic
CAediting_693811	chr9_88556890_+	ncRNA_intronic
CAediting_693812	chr9_88556900_+	ncRNA_intronic
CAediting_693813	chr9_88556934_+	ncRNA_intronic
CAediting_693814	chr9_88556950_+	ncRNA_intronic
CAediting_693815	chr9_88556974_+	ncRNA_intronic
CAediting_693816	chr9_88562606_+	ncRNA_intronic
CAediting_693817	chr9_88562631_+	ncRNA_intronic
CAediting_693818	chr9_88562632_+	ncRNA_intronic
CAediting_693819	chr9_88573206_+	ncRNA_intronic
CAediting_693820	chr9_88573213_+	ncRNA_intronic
CAediting_693821	chr9_88573223_+	ncRNA_intronic
CAediting_693822	chr9_88573243_+	ncRNA_intronic
CAediting_693823	chr9_88575507_+	ncRNA_intronic
CAediting_693824	chr9_88580423_+	ncRNA_intronic
CAediting_693825	chr9_88581507_+	ncRNA_intronic
CAediting_693826	chr9_88582730_+	ncRNA_intronic
CAediting_693827	chr9_88582743_+	ncRNA_intronic
CAediting_693828	chr9_88582833_+	ncRNA_intronic
CAediting_693829	chr9_88582848_+	ncRNA_intronic
CAediting_693830	chr9_88582853_+	ncRNA_intronic
CAediting_693831	chr9_88582930_+	ncRNA_intronic
CAediting_693832	chr9_88582942_+	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_693640	chr9_88539744_+	SINE	Alu	AluSq2
CAediting_693641	chr9_88539757_+	SINE	Alu	AluSq2
CAediting_693642	chr9_88539787_+	SINE	Alu	AluSq2
CAediting_693643	chr9_88539788_+	SINE	Alu	AluSq2
CAediting_693644	chr9_88539805_+	SINE	Alu	AluSq2
CAediting_693645	chr9_88539817_+	SINE	Alu	AluSq2
CAediting_693646	chr9_88539829_+	SINE	Alu	AluSq2
CAediting_693647	chr9_88539833_+	SINE	Alu	AluSq2
CAediting_693648	chr9_88539845_+	SINE	Alu	AluSq2
CAediting_693649	chr9_88539853_+	SINE	Alu	AluSq2
CAediting_693650	chr9_88539854_+	SINE	Alu	AluSq2
CAediting_693651	chr9_88539862_+	SINE	Alu	AluSq2
CAediting_693652	chr9_88539905_+	SINE	Alu	AluSq2
CAediting_693653	chr9_88539922_+	SINE	Alu	AluSq2
CAediting_693654	chr9_88539926_+	SINE	Alu	AluSq2
CAediting_693655	chr9_88539944_+	SINE	Alu	AluSq2
CAediting_693656	chr9_88539945_+	SINE	Alu	AluSq2
CAediting_693657	chr9_88539951_+	SINE	Alu	AluSq2
CAediting_693658	chr9_88539957_+	SINE	Alu	AluSq2
CAediting_693659	chr9_88539959_+	SINE	Alu	AluSq2
CAediting_693660	chr9_88540077_+	SINE	Alu	AluY
CAediting_693661	chr9_88540078_+	SINE	Alu	AluY
CAediting_693662	chr9_88540083_+	SINE	Alu	AluY
CAediting_693663	chr9_88540155_+	SINE	Alu	AluY
CAediting_693664	chr9_88540175_+	SINE	Alu	AluY
CAediting_693665	chr9_88540185_+	SINE	Alu	AluY
CAediting_693666	chr9_88540221_+	SINE	Alu	AluY
CAediting_693667	chr9_88540238_+	SINE	Alu	AluY
CAediting_693668	chr9_88540252_+	SINE	Alu	AluY
CAediting_693669	chr9_88540277_+	SINE	Alu	AluY
CAediting_693670	chr9_88540282_+	SINE	Alu	AluY
CAediting_693671	chr9_88540302_+	SINE	Alu	AluY
CAediting_693672	chr9_88540314_+	SINE	Alu	AluY
CAediting_693673	chr9_88541015_+	SINE	Alu	AluJo
CAediting_693674	chr9_88541046_+	SINE	Alu	AluJo
CAediting_693675	chr9_88541284_+	SINE	Alu	AluJo
CAediting_693676	chr9_88541330_+	SINE	Alu	AluJo
CAediting_693677	chr9_88541360_+	SINE	Alu	AluJo
CAediting_693678	chr9_88541361_+	SINE	Alu	AluJo
CAediting_693679	chr9_88541365_+	SINE	Alu	AluJo
CAediting_693680	chr9_88541378_+	SINE	Alu	AluJo
CAediting_693681	chr9_88541387_+	SINE	Alu	AluJo
CAediting_693682	chr9_88541402_+	SINE	Alu	AluJo
CAediting_693683	chr9_88541450_+	SINE	Alu	AluJo
CAediting_693684	chr9_88541514_+	SINE	Alu	AluJo
CAediting_693685	chr9_88541521_+	SINE	Alu	AluJo
CAediting_693686	chr9_88541522_+	SINE	Alu	AluJo
CAediting_693687	chr9_88541523_+	SINE	Alu	AluJo
CAediting_693688	chr9_88541535_+	SINE	Alu	AluJo
CAediting_693689	chr9_88541544_+	SINE	Alu	AluJo
CAediting_693690	chr9_88541975_+	SINE	Alu	AluY
CAediting_693691	chr9_88541976_+	SINE	Alu	AluY
CAediting_693692	chr9_88542002_+	SINE	Alu	AluY
CAediting_693693	chr9_88542178_+	SINE	Alu	AluY
CAediting_693694	chr9_88542198_+	SINE	Alu	AluY
CAediting_693695	chr9_88542220_+	SINE	Alu	AluY
CAediting_693696	chr9_88542221_+	SINE	Alu	AluY
CAediting_693697	chr9_88542228_+	SINE	Alu	AluY
CAediting_693698	chr9_88542300_+	SINE	Alu	AluSx3
CAediting_693699	chr9_88542320_+	SINE	Alu	AluSx3
CAediting_693700	chr9_88542328_+	SINE	Alu	AluSx3
CAediting_693701	chr9_88542363_+	SINE	Alu	AluSx3
CAediting_693702	chr9_88542368_+	SINE	Alu	AluSx3
CAediting_693703	chr9_88542388_+	SINE	Alu	AluSx3
CAediting_693704	chr9_88542389_+	SINE	Alu	AluSx3
CAediting_693705	chr9_88542392_+	SINE	Alu	AluSx3
CAediting_693706	chr9_88542393_+	SINE	Alu	AluSx3
CAediting_693707	chr9_88542414_+	SINE	Alu	AluSx3
CAediting_693708	chr9_88542428_+	SINE	Alu	AluSx3
CAediting_693709	chr9_88542430_+	SINE	Alu	AluSx3
CAediting_693710	chr9_88542431_+	SINE	Alu	AluSx3
CAediting_693711	chr9_88542432_+	SINE	Alu	AluSx3
CAediting_693712	chr9_88542454_+	SINE	Alu	AluSx3
CAediting_693713	chr9_88542464_+	SINE	Alu	AluSx3
CAediting_693714	chr9_88542470_+	SINE	Alu	AluSx3
CAediting_693715	chr9_88542473_+	SINE	Alu	AluSx3
CAediting_693716	chr9_88542475_+	SINE	Alu	AluSx3
CAediting_693717	chr9_88542479_+	SINE	Alu	AluSx3
CAediting_693718	chr9_88542510_+	SINE	Alu	AluSx3
CAediting_693719	chr9_88542512_+	SINE	Alu	AluSx3
CAediting_693720	chr9_88542524_+	SINE	Alu	AluSx3
CAediting_693721	chr9_88542527_+	SINE	Alu	AluSx3
CAediting_693722	chr9_88542540_+	SINE	Alu	AluSx3
CAediting_693723	chr9_88542548_+	SINE	Alu	AluSx3
CAediting_693724	chr9_88542549_+	SINE	Alu	AluSx3
CAediting_693725	chr9_88542550_+	SINE	Alu	AluSx3
CAediting_693726	chr9_88542562_+	SINE	Alu	AluSx3
CAediting_693727	chr9_88543290_+	SINE	Alu	AluJb
CAediting_693728	chr9_88543293_+	SINE	Alu	AluJb
CAediting_693729	chr9_88543294_+	SINE	Alu	AluJb
CAediting_693730	chr9_88543318_+	SINE	Alu	AluJb
CAediting_693731	chr9_88543324_+	SINE	Alu	AluJb
CAediting_693732	chr9_88543328_+	SINE	Alu	AluJb
CAediting_693733	chr9_88543331_+	SINE	Alu	AluJb
CAediting_693734	chr9_88543332_+	SINE	Alu	AluJb
CAediting_693735	chr9_88543346_+	SINE	Alu	AluJb
CAediting_693736	chr9_88543353_+	SINE	Alu	AluJb
CAediting_693737	chr9_88543366_+	SINE	Alu	AluJb
CAediting_693738	chr9_88543367_+	SINE	Alu	AluJb
CAediting_693739	chr9_88543371_+	SINE	Alu	AluJb
CAediting_693740	chr9_88543379_+	SINE	Alu	AluJb
CAediting_693741	chr9_88543384_+	SINE	Alu	AluJb
CAediting_693742	chr9_88543396_+	SINE	Alu	AluJb
CAediting_693743	chr9_88543406_+	SINE	Alu	AluJb
CAediting_693744	chr9_88543408_+	SINE	Alu	AluJb
CAediting_693745	chr9_88543414_+	SINE	Alu	AluJb
CAediting_693746	chr9_88543449_+	SINE	Alu	AluJb
CAediting_693747	chr9_88543451_+	SINE	Alu	AluJb
CAediting_693748	chr9_88543456_+	SINE	Alu	AluJb
CAediting_693749	chr9_88543463_+	SINE	Alu	AluJb
CAediting_693750	chr9_88543475_+	SINE	Alu	AluJb
CAediting_693751	chr9_88543487_+	SINE	Alu	AluJb
CAediting_693752	chr9_88543488_+	SINE	Alu	AluJb
CAediting_693753	chr9_88543501_+	SINE	Alu	AluJb
CAediting_693754	chr9_88543513_+	SINE	Alu	AluJb
CAediting_693755	chr9_88543518_+	SINE	Alu	AluJb
CAediting_693756	chr9_88543528_+	SINE	Alu	AluJb
CAediting_693757	chr9_88543558_+	SINE	Alu	AluJb
CAediting_693758	chr9_88543905_+	SINE	Alu	AluSq2
CAediting_693759	chr9_88543915_+	SINE	Alu	AluSq2
CAediting_693760	chr9_88543936_+	SINE	Alu	AluSq2
CAediting_693761	chr9_88543937_+	SINE	Alu	AluSq2
CAediting_693762	chr9_88543945_+	SINE	Alu	AluSq2
CAediting_693763	chr9_88543950_+	SINE	Alu	AluSq2
CAediting_693764	chr9_88543993_+	SINE	Alu	AluSq2
CAediting_693765	chr9_88543994_+	SINE	Alu	AluSq2
CAediting_693766	chr9_88543999_+	SINE	Alu	AluSq2
CAediting_693767	chr9_88544005_+	SINE	Alu	AluSq2
CAediting_693768	chr9_88544008_+	SINE	Alu	AluSq2
CAediting_693769	chr9_88544009_+	SINE	Alu	AluSq2
CAediting_693770	chr9_88544011_+	SINE	Alu	AluSq2
CAediting_693771	chr9_88544012_+	SINE	Alu	AluSq2
CAediting_693772	chr9_88544014_+	SINE	Alu	AluSq2
CAediting_693773	chr9_88544019_+	SINE	Alu	AluSq2
CAediting_693774	chr9_88544020_+	SINE	Alu	AluSq2
CAediting_693775	chr9_88544021_+	SINE	Alu	AluSq2
CAediting_693776	chr9_88544024_+	SINE	Alu	AluSq2
CAediting_693777	chr9_88544042_+	SINE	Alu	AluSq2
CAediting_693778	chr9_88544044_+	SINE	Alu	AluSq2
CAediting_693779	chr9_88544051_+	SINE	Alu	AluSq2
CAediting_693780	chr9_88544056_+	SINE	Alu	AluSq2
CAediting_693781	chr9_88544060_+	SINE	Alu	AluSq2
CAediting_693782	chr9_88544073_+	SINE	Alu	AluSq2
CAediting_693783	chr9_88544077_+	SINE	Alu	AluSq2
CAediting_693784	chr9_88544082_+	SINE	Alu	AluSq2
CAediting_693785	chr9_88544083_+	SINE	Alu	AluSq2
CAediting_693786	chr9_88544091_+	SINE	Alu	AluSq2
CAediting_693787	chr9_88544092_+	SINE	Alu	AluSq2
CAediting_693788	chr9_88544099_+	SINE	Alu	AluSq2
CAediting_693789	chr9_88544121_+	SINE	Alu	AluSq2
CAediting_693790	chr9_88544153_+	SINE	Alu	AluSq2
CAediting_693791	chr9_88544154_+	SINE	Alu	AluSq2
CAediting_693792	chr9_88544157_+	SINE	Alu	AluSq2
CAediting_693793	chr9_88544162_+	SINE	Alu	AluSq2
CAediting_693794	chr9_88546595_+	SINE	Alu	AluSx1
CAediting_693795	chr9_88547870_+	SINE	Alu	AluSq
CAediting_693796	chr9_88547874_+	SINE	Alu	AluSq
CAediting_693797	chr9_88547890_+	SINE	Alu	AluSq
CAediting_693798	chr9_88547906_+	SINE	Alu	AluSq
CAediting_693799	chr9_88547923_+	SINE	Alu	AluSq
CAediting_693800	chr9_88547929_+	SINE	Alu	AluSq
CAediting_693801	chr9_88547941_+	SINE	Alu	AluSq
CAediting_693802	chr9_88548100_+	SINE	Alu	AluSq2
CAediting_693803	chr9_88548288_+	SINE	Alu	AluSq2
CAediting_693804	chr9_88548430_+	SINE	Alu	AluY
CAediting_693805	chr9_88548567_+	SINE	Alu	AluY
CAediting_693806	chr9_88553225_+	SINE	Alu	AluSq2
CAediting_693807	chr9_88553226_+	SINE	Alu	AluSq2
CAediting_693808	chr9_88553267_+	SINE	Alu	AluSq2
CAediting_693809	chr9_88554318_+	SINE	Alu	AluSz
CAediting_693810	chr9_88556889_+	SINE	Alu	AluSc8
CAediting_693811	chr9_88556890_+	SINE	Alu	AluSc8
CAediting_693812	chr9_88556900_+	SINE	Alu	AluSc8
CAediting_693813	chr9_88556934_+	SINE	Alu	AluSc8
CAediting_693814	chr9_88556950_+	SINE	Alu	AluSc8
CAediting_693815	chr9_88556974_+	SINE	Alu	AluSc8
CAediting_693816	chr9_88562606_+	SINE	Alu	AluSz
CAediting_693817	chr9_88562631_+	SINE	Alu	AluSz
CAediting_693818	chr9_88562632_+	SINE	Alu	AluSz
CAediting_693819	chr9_88573206_+	SINE	Alu	AluJb
CAediting_693820	chr9_88573213_+	SINE	Alu	AluJb
CAediting_693821	chr9_88573223_+	SINE	Alu	AluJb
CAediting_693822	chr9_88573243_+	SINE	Alu	AluJb
CAediting_693823	chr9_88575507_+	LINE	L1	L1MA2
CAediting_693824	chr9_88580423_+	SINE	Alu	AluSq
CAediting_693825	chr9_88581507_+	SINE	Alu	AluSp
CAediting_693826	chr9_88582730_+	SINE	Alu	AluSz6
CAediting_693827	chr9_88582743_+	SINE	Alu	AluSz6
CAediting_693828	chr9_88582833_+	SINE	Alu	AluSz6
CAediting_693829	chr9_88582848_+	SINE	Alu	AluSz6
CAediting_693830	chr9_88582853_+	SINE	Alu	AluSz6
CAediting_693831	chr9_88582930_+	SINE	Alu	AluSz6
CAediting_693832	chr9_88582942_+	SINE	Alu	AluSz6

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RNA A-to-I editing events in the alternative splicing sites for NXNL2

RNA A-to-I editing(s) in the alternative splicing sites.

AStype	CAeditomID	Editing position	AS position	AS direction	Exonic location	Wildtype sequence	Wildtype splicing strength	RNA edited sequence	RNA edited splicing strength
ES	CAediting_693727	chr9_88543290_+	88543271:88543293	3SS	0+1i	TTTTTTTTTTTTTTTCCTTAGAA	-5.45	TTTTTTTTTTTTTTTCCTTGGAA	3.3
MEX_2	CAediting_693727	chr9_88543290_+	88543271:88543293	3SS	0+1i	TTTTTTTTTTTTTTTCCTTAGAA	-5.45	TTTTTTTTTTTTTTTCCTTGGAA	3.3
ES	CAediting_693728	chr9_88543293_+	88543271:88543293	3SS	3+0i	TTTTTTTTTTTTTTTCCTTAGAA	-5.45	TTTTTTTTTTTTTTTCCTTAGAG	-6.06
MEX_2	CAediting_693728	chr9_88543293_+	88543271:88543293	3SS	3+0i	TTTTTTTTTTTTTTTCCTTAGAA	-5.45	TTTTTTTTTTTTTTTCCTTAGAG	-6.06
ES	CAediting_693744	chr9_88543408_+	88543407:88543415	5SS	2+0i	TAGGTGCAT	0.81	TGGGTGCAT	-2.84
IR	CAediting_693744	chr9_88543408_+	88543407:88543415	5SS	2+0i	TAGGTGCAT	0.81	TGGGTGCAT	-2.84
MEX_2	CAediting_693744	chr9_88543408_+	88543407:88543415	5SS	2+0i	TAGGTGCAT	0.81	TGGGTGCAT	-2.84
ES	CAediting_693745	chr9_88543414_+	88543407:88543415	5SS	0+5i	TAGGTGCAT	0.81	TAGGTGCGT	6.6
IR	CAediting_693745	chr9_88543414_+	88543407:88543415	5SS	0+5i	TAGGTGCAT	0.81	TAGGTGCGT	6.6
MEX_2	CAediting_693745	chr9_88543414_+	88543407:88543415	5SS	0+5i	TAGGTGCAT	0.81	TAGGTGCGT	6.6

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000130045.14.NXNL2.

Correlation between RNA A-to-I editing and PSI for ENSG00000130045.14.NXNL2.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for NXNL2

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

OV.CAediting_693783.ENSG00000130045.NXNL2.png
Soverview

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Protein coding region RNA A-to-I editings for NXNL2

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for NXNL2

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_693823	chr9_88575507_+	ENSG00000130045.14	ENST00000375855	hsa-miR-1237-3p	88575501	88575508	8mer-1a	88575488	88575508	144.00	-15.52
CAediting_693823	chr9_88575507_+	ENSG00000130045.14	ENST00000375855	hsa-miR-2355-3p	88575505	88575512	8mer-1a	88575490	88575512	159.00	-21.17
CAediting_693823	chr9_88575507_+	ENSG00000130045.14	ENST00000375855	hsa-miR-3182	88575500	88575506	7mer-m8	88575492	88575507	141.00	-10.13
CAediting_693823	chr9_88575507_+	ENSG00000130045.14	ENST00000375855	hsa-miR-6868-3p	88575502	88575508	7mer-m8	88575491	88575509	163.00	-24.59

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_693823	chr9_88575507_+	ENSG00000130045.14	ENST00000375855	hsa-miR-511-5p	88575504	88575511	8mer-1a	88575493	88575511	149	-13.67

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for NXNL2

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for NXNL2

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
BRCA	CAediting_693735	chr9_88543346_+	0.0249023664427968	0.307902931506885	.	.	.	.

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Relation with cancer stages for NXNL2

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
BRCA	pathologic_stage	CAediting_693735	chr9_88543346_+	0.0275288946484834	0.30280788317497
KIRP	clinical_stage	CAediting_693732	chr9_88543328_+	0.0316653477053135	0.317290974756665
KIRP	pathologic_stage	CAediting_693732	chr9_88543328_+	0.021246944243815	0.292086249325954
OV	clinical_stage	CAediting_693735	chr9_88543346_+	0.0107502843114844	0.329783819674406

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Relation with survival for NXNL2

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for NXNL2

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for NXNL2

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene