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![]() | Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples |
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![]() | The effects of the RNA editing to the stability of the RNA structures |
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Editing gene: CAMSAP1 (CAeditome ID:157922) |
Gene summary for CAMSAP1 |
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Gene information | Gene symbol | CAMSAP1 | Gene ID | 157922 |
Gene name | calmodulin regulated spectrin associated protein 1 | |
Synonyms | - | |
Cytomap | 9q34.3 | |
Type of gene | protein-coding | |
Description | calmodulin-regulated spectrin-associated protein 1epididymis secretory sperm binding protein | |
Modification date | 20210518 | |
UniProtAcc | Q5T5Y3 | |
Context |
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Gene | GO ID | GO term | PubMed ID |
CAMSAP1 | GO:0036449 | Calmodulin-regulated spectrin-associated protein 1 | 24486153 |
CAMSAP1 | GO:0036449 | Calmodulin-regulated spectrin-associated protein 1 | 24706919 |
CAMSAP1 | GO:0008017 | Calmodulin-regulated spectrin-associated protein 1 | 19508979 |
CAMSAP1 | GO:0030507 | Calmodulin-regulated spectrin-associated protein 1 | 24117850 |
CAMSAP1 | GO:0051011 | Calmodulin-regulated spectrin-associated protein 1 | 24486153 |
CAMSAP1 | GO:0051011 | Calmodulin-regulated spectrin-associated protein 1 | 24706919 |
CAMSAP1 | GO:0000226 | Calmodulin-regulated spectrin-associated protein 1 | 24486153 |
CAMSAP1 | GO:0000226 | Calmodulin-regulated spectrin-associated protein 1 | 24706919 |
CAMSAP1 | GO:0031113 | Calmodulin-regulated spectrin-associated protein 1 | 24486153 |
CAMSAP1 | GO:0031113 | Calmodulin-regulated spectrin-associated protein 1 | 24706919 |
CAMSAP1 | GO:0005874 | Calmodulin-regulated spectrin-associated protein 1 | 19508979 |
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RNA A-to-I events for CAMSAP1 |
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CAediting_722325(135822318, -), CAediting_722326(135855619, -), CAediting_722327(135860476, -), CAediting_722328(135868755, -), CAediting_722329(135868781, -), CAediting_722330(135868784, -), CAediting_722331(135868785, -), CAediting_722332(135868791, -), CAediting_722333(135868794, -), CAediting_722334(135868795, -), CAediting_722335(135868796, -), CAediting_722336(135868797, -), CAediting_722337(135868821, -), CAediting_722338(135868883, -), CAediting_722339(135868888, -), CAediting_722340(135868889, -), CAediting_722341(135868897, -), CAediting_722342(135871372, -), CAediting_722343(135871387, -), CAediting_722344(135871406, -), CAediting_722345(135871407, -), CAediting_722346(135872002, -), |
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RNA editing positional annotations for CAMSAP1 using Annovar |
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CAeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
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CAeditome ID | Position | Variant type |
CAediting_722325 | chr9_135822318_- | exonic |
CAediting_722326 | chr9_135855619_- | ncRNA_intronic |
CAediting_722327 | chr9_135860476_- | ncRNA_intronic |
CAediting_722328 | chr9_135868755_- | ncRNA_intronic |
CAediting_722329 | chr9_135868781_- | ncRNA_intronic |
CAediting_722330 | chr9_135868784_- | ncRNA_intronic |
CAediting_722331 | chr9_135868785_- | ncRNA_intronic |
CAediting_722332 | chr9_135868791_- | ncRNA_intronic |
CAediting_722333 | chr9_135868794_- | ncRNA_intronic |
CAediting_722334 | chr9_135868795_- | ncRNA_intronic |
CAediting_722335 | chr9_135868796_- | ncRNA_intronic |
CAediting_722336 | chr9_135868797_- | ncRNA_intronic |
CAediting_722337 | chr9_135868821_- | ncRNA_intronic |
CAediting_722338 | chr9_135868883_- | ncRNA_intronic |
CAediting_722339 | chr9_135868888_- | ncRNA_intronic |
CAediting_722340 | chr9_135868889_- | ncRNA_intronic |
CAediting_722341 | chr9_135868897_- | ncRNA_intronic |
CAediting_722342 | chr9_135871372_- | ncRNA_intronic |
CAediting_722343 | chr9_135871387_- | ncRNA_intronic |
CAediting_722344 | chr9_135871406_- | ncRNA_intronic |
CAediting_722345 | chr9_135871407_- | ncRNA_intronic |
CAediting_722346 | chr9_135872002_- | ncRNA_intronic |
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CAeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
CAediting_722325 | chr9_135822318_- | Simple_repeat | Simple_repeat | (TCATCT)n |
CAediting_722326 | chr9_135855619_- | SINE | Alu | AluSx |
CAediting_722327 | chr9_135860476_- | SINE | Alu | AluSx1 |
CAediting_722328 | chr9_135868755_- | SINE | Alu | AluY |
CAediting_722329 | chr9_135868781_- | SINE | Alu | AluY |
CAediting_722330 | chr9_135868784_- | SINE | Alu | AluY |
CAediting_722331 | chr9_135868785_- | SINE | Alu | AluY |
CAediting_722332 | chr9_135868791_- | SINE | Alu | AluY |
CAediting_722333 | chr9_135868794_- | SINE | Alu | AluY |
CAediting_722334 | chr9_135868795_- | SINE | Alu | AluY |
CAediting_722335 | chr9_135868796_- | SINE | Alu | AluY |
CAediting_722336 | chr9_135868797_- | SINE | Alu | AluY |
CAediting_722337 | chr9_135868821_- | SINE | Alu | AluY |
CAediting_722338 | chr9_135868883_- | SINE | Alu | AluY |
CAediting_722339 | chr9_135868888_- | SINE | Alu | AluY |
CAediting_722340 | chr9_135868889_- | SINE | Alu | AluY |
CAediting_722341 | chr9_135868897_- | SINE | Alu | AluY |
CAediting_722342 | chr9_135871372_- | SINE | Alu | AluJb |
CAediting_722343 | chr9_135871387_- | SINE | Alu | AluJb |
CAediting_722344 | chr9_135871406_- | SINE | Alu | AluJb |
CAediting_722345 | chr9_135871407_- | SINE | Alu | AluJb |
CAediting_722346 | chr9_135872002_- | SINE | Alu | AluSp |
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RNA A-to-I editing events in the alternative splicing sites for CAMSAP1 |
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AStype | CAeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for CAMSAP1 |
![]() * The grey color means N/A. |
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Protein coding region RNA A-to-I editings for CAMSAP1 |
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The effects of the RNA editing to the miRNA binding sites for CAMSAP1 |
**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page. |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_1229414 | chr17_67471546_+ | ENSG00000130559.17 | ENST00000389532 | hsa-miR-548aa | 135809849 | 135809855 | 7mer-1a | 135809849 | 135809874 | 140 | -15.67 |
CAediting_1229415 | chr17_67471547_+ | ENSG00000130559.17 | ENST00000389532 | hsa-miR-548aa | 135810184 | 135810190 | 7mer-m8 | 135810183 | 135810209 | 164 | -13.95 |
CAediting_1351755 | chr19_40282625_- | ENSG00000130559.17 | ENST00000389532 | hsa-miR-641 | 135809046 | 135809052 | 7mer-m8 | 135809045 | 135809071 | 159 | -18.72 |
CAediting_1399425 | chr20_1392958_- | ENSG00000130559.17 | ENST00000389532 | hsa-miR-6869-5p | 135808920 | 135808926 | 7mer-m8 | 135808919 | 135808940 | 147 | -19.16 |
CAediting_1399425 | chr20_1392958_- | ENSG00000130559.17 | ENST00000389532 | hsa-miR-6869-5p | 135808745 | 135808751 | 7mer-m8 | 135808744 | 135808765 | 145 | -23.06 |
CAediting_580943 | chr7_100356700_+ | ENSG00000130559.17 | ENST00000389532 | hsa-miR-6840-3p | 135810991 | 135810997 | 7mer-m8 | 135810990 | 135811012 | 158 | -30.72 |
CAediting_1229414 | chr17_67471546_+ | ENSG00000130559.17 | ENST00000312405 | hsa-miR-548aa | 135809849 | 135809855 | 7mer-1a | 135809849 | 135809874 | 140 | -15.67 |
CAediting_1229415 | chr17_67471547_+ | ENSG00000130559.17 | ENST00000312405 | hsa-miR-548aa | 135810184 | 135810190 | 7mer-m8 | 135810183 | 135810209 | 164 | -13.95 |
CAediting_580943 | chr7_100356700_+ | ENSG00000130559.17 | ENST00000312405 | hsa-miR-6840-3p | 135810991 | 135810997 | 7mer-m8 | 135810990 | 135811012 | 158 | -30.72 |
CAediting_580943 | chr7_100356700_+ | ENSG00000130559.17 | ENST00000409386 | hsa-miR-6840-3p | 135810991 | 135810997 | 7mer-m8 | 135810990 | 135811012 | 158 | -30.72 |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_1229413 | chr17_67471544_+ | ENSG00000130559.17 | ENST00000389532 | hsa-miR-548aa | 135810353 | 135810359 | 7mer-m8 | 135810352 | 135810379 | 146 | -11.07 |
CAediting_1229414 | chr17_67471546_+ | ENSG00000130559.17 | ENST00000389532 | hsa-miR-548aa | 135810353 | 135810359 | 7mer-m8 | 135810352 | 135810379 | 146 | -11.07 |
CAediting_1229415 | chr17_67471547_+ | ENSG00000130559.17 | ENST00000389532 | hsa-miR-548aa | 135810353 | 135810359 | 7mer-m8 | 135810352 | 135810379 | 146 | -11.07 |
CAediting_980496 | chr14_31014685_- | ENSG00000130559.17 | ENST00000389532 | hsa-miR-624-3p | 135808945 | 135808951 | 7mer-m8 | 135808944 | 135808962 | 150 | -9.7 |
CAediting_1229413 | chr17_67471544_+ | ENSG00000130559.17 | ENST00000312405 | hsa-miR-548aa | 135810353 | 135810359 | 7mer-m8 | 135810352 | 135810379 | 146 | -11.07 |
CAediting_1229414 | chr17_67471546_+ | ENSG00000130559.17 | ENST00000312405 | hsa-miR-548aa | 135810353 | 135810359 | 7mer-m8 | 135810352 | 135810379 | 146 | -11.07 |
CAediting_1229415 | chr17_67471547_+ | ENSG00000130559.17 | ENST00000312405 | hsa-miR-548aa | 135810353 | 135810359 | 7mer-m8 | 135810352 | 135810379 | 146 | -11.07 |
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The effects of the RNA editing to the stability of the RNA structures for CAMSAP1 |
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ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
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CAeditom_ID | ENST | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for CAMSAP1 |
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Cancer | CAeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
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Relation with cancer stages for CAMSAP1 |
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Cancer | Stage_type | CAeditomID | position | P-val | Coeff. |
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Relation with survival for CAMSAP1 |
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Cancer | CAeditomID | position | KMpvalue | Coxpvalue | CoxHR |
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RelatedDrugs for CAMSAP1 |
![]() (DrugBank Version 5.1.8 2021-01-03) |
Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for CAMSAP1 |
![]() (DisGeNet 7.0) |
Gene | Disease ID | Disease name | # pubmeds | Source |
CAMSAP1 | C0087031 | Juvenile-Onset Still Disease | 1 | CTD_human |
CAMSAP1 | C3495559 | Juvenile arthritis | 1 | CTD_human |
CAMSAP1 | C3714758 | Juvenile psoriatic arthritis | 1 | CTD_human |
CAMSAP1 | C4552091 | Polyarthritis, Juvenile, Rheumatoid Factor Negative | 1 | CTD_human |
CAMSAP1 | C4704862 | Polyarthritis, Juvenile, Rheumatoid Factor Positive | 1 | CTD_human |