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Editing gene: VPS13B (CAeditome ID:157680)

Gene summary for VPS13B

Gene summary

Gene information	Gene symbol	VPS13B
	Gene ID	157680
	Gene name	vacuolar protein sorting 13 homolog B
	Synonyms	CHS1\|COH1
	Cytomap	8q22.2
	Type of gene	protein-coding
	Description	vacuolar protein sorting-associated protein 13B
	Modification date	20210518
	UniProtAcc	Q7Z7G8
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

Top

RNA A-to-I events for VPS13B

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000132549.17

RNA A-to-I editing events in Cancer.

CAediting_652713(99015711, +), CAediting_652714(99021656, +), CAediting_652715(99021718, +), CAediting_652716(99021724, +), CAediting_652717(99021725, +), CAediting_652718(99041649, +), CAediting_652719(99056182, +), CAediting_652720(99056183, +), CAediting_652721(99056186, +), CAediting_652722(99059262, +), CAediting_652723(99059894, +), CAediting_652724(99059933, +), CAediting_652725(99060530, +), CAediting_652726(99065211, +), CAediting_652727(99065212, +), CAediting_652728(99065277, +), CAediting_652729(99065281, +), CAediting_652730(99067538, +), CAediting_652731(99067587, +), CAediting_652732(99069303, +), CAediting_652733(99069306, +), CAediting_652734(99069313, +), CAediting_652735(99069340, +), CAediting_652736(99069973, +), CAediting_652737(99070054, +), CAediting_652738(99106314, +), CAediting_652739(99106315, +), CAediting_652740(99121932, +), CAediting_652741(99122127, +), CAediting_652742(99122849, +), CAediting_652743(99122857, +), CAediting_652744(99122858, +), CAediting_652745(99122863, +), CAediting_652746(99122907, +), CAediting_652747(99122912, +), CAediting_652748(99122917, +), CAediting_652749(99122923, +), CAediting_652750(99122926, +), CAediting_652751(99122927, +), CAediting_652752(99122929, +), CAediting_652753(99122937, +), CAediting_652754(99122974, +), CAediting_652755(99123000, +), CAediting_652756(99123001, +), CAediting_652757(99123006, +), CAediting_652758(99123010, +), CAediting_652759(99123022, +), CAediting_652760(99123027, +), CAediting_652761(99123032, +), CAediting_652762(99123042, +), CAediting_652763(99123071, +), CAediting_652764(99123086, +), CAediting_652765(99124632, +), CAediting_652766(99124708, +), CAediting_652767(99124755, +), CAediting_652768(99124761, +), CAediting_652769(99124762, +), CAediting_652770(99124771, +), CAediting_652771(99126836, +), CAediting_652772(99126838, +), CAediting_652773(99126844, +), CAediting_652774(99126852, +), CAediting_652775(99126874, +), CAediting_652776(99126893, +), CAediting_652777(99126918, +), CAediting_652778(99126929, +), CAediting_652779(99126934, +), CAediting_652780(99126935, +), CAediting_652781(99126936, +), CAediting_652782(99126939, +), CAediting_652783(99126944, +), CAediting_652784(99126945, +), CAediting_652785(99126948, +), CAediting_652786(99126952, +), CAediting_652787(99126953, +), CAediting_652788(99126956, +), CAediting_652789(99126974, +), CAediting_652790(99126984, +), CAediting_652791(99126988, +), CAediting_652792(99127029, +), CAediting_652793(99127050, +), CAediting_652794(99127119, +), CAediting_652795(99128127, +), CAediting_652796(99128136, +), CAediting_652797(99128171, +), CAediting_652798(99128179, +), CAediting_652799(99128193, +), CAediting_652800(99128203, +), CAediting_652801(99128210, +), CAediting_652802(99128211, +), CAediting_652803(99128222, +), CAediting_652804(99128226, +), CAediting_652805(99128227, +), CAediting_652806(99128228, +), CAediting_652807(99128231, +), CAediting_652808(99128233, +), CAediting_652809(99128236, +), CAediting_652810(99128237, +), CAediting_652811(99128240, +), CAediting_652812(99128256, +), CAediting_652813(99128266, +), CAediting_652814(99128267, +), CAediting_652815(99128276, +), CAediting_652816(99128290, +), CAediting_652817(99128299, +), CAediting_652818(99128307, +), CAediting_652819(99128308, +), CAediting_652820(99128369, +), CAediting_652821(99128375, +), CAediting_652822(99128951, +), CAediting_652823(99129421, +), CAediting_652824(99129424, +), CAediting_652825(99129447, +), CAediting_652826(99129461, +), CAediting_652827(99129471, +), CAediting_652828(99129488, +), CAediting_652829(99129524, +), CAediting_652830(99129554, +), CAediting_652831(99129873, +), CAediting_652832(99129882, +), CAediting_652833(99129895, +), CAediting_652834(99129919, +), CAediting_652835(99130004, +), CAediting_652836(99130419, +), CAediting_652837(99130492, +), CAediting_652838(99130527, +), CAediting_652839(99130529, +), CAediting_652840(99131916, +), CAediting_652841(99131971, +), CAediting_652842(99131976, +), CAediting_652843(99131977, +), CAediting_652844(99131997, +), CAediting_652845(99132026, +), CAediting_652846(99132062, +), CAediting_652847(99132063, +), CAediting_652848(99132106, +), CAediting_652849(99132117, +), CAediting_652850(99132140, +), CAediting_652851(99132159, +), CAediting_652852(99132171, +), CAediting_652853(99132173, +), CAediting_652854(99139491, +), CAediting_652855(99139644, +), CAediting_652856(99140111, +), CAediting_652857(99140142, +), CAediting_652858(99140155, +), CAediting_652859(99140234, +), CAediting_652860(99140245, +), CAediting_652861(99140286, +), CAediting_652862(99141932, +), CAediting_652863(99148257, +), CAediting_652864(99148266, +), CAediting_652865(99148284, +), CAediting_652866(99148310, +), CAediting_652867(99148313, +), CAediting_652868(99148327, +), CAediting_652869(99151767, +), CAediting_652870(99158426, +), CAediting_652871(99159844, +), CAediting_652872(99159941, +), CAediting_652873(99160395, +), CAediting_652874(99160404, +), CAediting_652875(99160418, +), CAediting_652876(99160483, +), CAediting_652877(99160494, +), CAediting_652878(99160497, +), CAediting_652879(99160498, +), CAediting_652880(99160499, +), CAediting_652881(99160503, +), CAediting_652882(99160507, +), CAediting_652883(99160512, +), CAediting_652884(99160558, +), CAediting_652885(99160571, +), CAediting_652886(99160576, +), CAediting_652887(99160621, +), CAediting_652888(99160626, +), CAediting_652889(99160630, +), CAediting_652890(99191517, +), CAediting_652891(99191525, +), CAediting_652892(99209158, +), CAediting_652893(99209228, +), CAediting_652894(99209659, +), CAediting_652895(99210707, +), CAediting_652896(99210708, +), CAediting_652897(99210718, +), CAediting_652898(99210731, +), CAediting_652899(99211600, +), CAediting_652900(99211615, +), CAediting_652901(99211617, +), CAediting_652902(99211619, +), CAediting_652903(99211630, +), CAediting_652904(99211656, +), CAediting_652905(99211667, +), CAediting_652906(99212010, +), CAediting_652907(99245764, +), CAediting_652908(99246684, +), CAediting_652909(99267544, +), CAediting_652910(99267593, +), CAediting_652911(99267647, +), CAediting_652912(99267672, +), CAediting_652913(99269098, +), CAediting_652914(99271589, +), CAediting_652915(99279101, +), CAediting_652916(99279118, +), CAediting_652917(99279171, +), CAediting_652918(99279188, +), CAediting_652919(99279189, +), CAediting_652920(99279194, +), CAediting_652921(99279292, +), CAediting_652922(99280031, +), CAediting_652923(99288915, +), CAediting_652924(99288928, +), CAediting_652925(99288942, +), CAediting_652926(99288950, +), CAediting_652927(99288958, +), CAediting_652928(99288977, +), CAediting_652929(99298354, +), CAediting_652930(99299314, +), CAediting_652931(99299656, +), CAediting_652932(99301094, +), CAediting_652933(99301130, +), CAediting_652934(99301135, +), CAediting_652935(99301156, +), CAediting_652936(99301373, +), CAediting_652937(99302590, +), CAediting_652938(99302609, +), CAediting_652939(99302610, +), CAediting_652940(99302613, +), CAediting_652941(99302635, +), CAediting_652942(99302649, +), CAediting_652943(99302666, +), CAediting_652944(99302772, +), CAediting_652945(99303025, +), CAediting_652946(99303026, +), CAediting_652947(99303031, +), CAediting_652948(99303080, +), CAediting_652949(99303093, +), CAediting_652950(99303095, +), CAediting_652951(99303114, +), CAediting_652952(99303118, +), CAediting_652953(99303120, +), CAediting_652954(99303121, +), CAediting_652955(99303123, +), CAediting_652956(99303128, +), CAediting_652957(99303129, +), CAediting_652958(99303130, +), CAediting_652959(99303159, +), CAediting_652960(99303160, +), CAediting_652961(99303165, +), CAediting_652962(99303176, +), CAediting_652963(99303186, +), CAediting_652964(99303200, +), CAediting_652965(99303201, +), CAediting_652966(99303608, +), CAediting_652967(99303618, +), CAediting_652968(99303623, +), CAediting_652969(99303630, +), CAediting_652970(99303641, +), CAediting_652971(99303649, +), CAediting_652972(99303650, +), CAediting_652973(99303670, +), CAediting_652974(99303674, +), CAediting_652975(99303681, +), CAediting_652976(99353167, +), CAediting_652977(99353274, +), CAediting_652978(99387406, +), CAediting_652979(99387420, +), CAediting_652980(99387425, +), CAediting_652981(99387451, +), CAediting_652982(99387475, +), CAediting_652983(99388939, +), CAediting_652984(99401745, +), CAediting_652985(99403438, +), CAediting_652986(99403442, +), CAediting_652987(99403446, +), CAediting_652988(99403461, +), CAediting_652989(99437463, +), CAediting_652990(99444404, +), CAediting_652991(99444413, +), CAediting_652992(99444414, +), CAediting_652993(99444417, +), CAediting_652994(99444444, +), CAediting_652995(99444474, +), CAediting_652996(99444478, +), CAediting_652997(99444480, +), CAediting_652998(99444744, +), CAediting_652999(99445727, +), CAediting_653000(99449840, +), CAediting_653001(99449904, +), CAediting_653002(99449908, +), CAediting_653003(99449939, +), CAediting_653004(99449966, +), CAediting_653005(99449971, +), CAediting_653006(99449979, +), CAediting_653007(99449985, +), CAediting_653008(99449992, +), CAediting_653009(99450014, +), CAediting_653010(99450046, +), CAediting_653011(99450490, +), CAediting_653012(99450497, +), CAediting_653013(99450566, +), CAediting_653014(99454240, +), CAediting_653015(99493523, +), CAediting_653016(99493634, +), CAediting_653017(99493697, +), CAediting_653018(99502034, +), CAediting_653019(99502102, +), CAediting_653020(99539490, +), CAediting_653021(99539512, +), CAediting_653022(99539617, +), CAediting_653023(99541469, +), CAediting_653024(99562533, +), CAediting_653025(99562941, +), CAediting_653026(99562954, +), CAediting_653027(99562964, +), CAediting_653028(99563016, +), CAediting_653029(99563082, +), CAediting_653030(99563112, +), CAediting_653031(99569306, +), CAediting_653032(99569308, +), CAediting_653033(99569349, +), CAediting_653034(99569354, +), CAediting_653035(99579754, +), CAediting_653036(99579950, +), CAediting_653037(99580663, +), CAediting_653038(99580668, +), CAediting_653039(99580731, +), CAediting_653040(99580767, +), CAediting_653041(99580778, +), CAediting_653042(99580786, +), CAediting_653043(99580966, +), CAediting_653044(99581089, +), CAediting_653045(99581098, +), CAediting_653046(99581132, +), CAediting_653047(99581133, +), CAediting_653048(99581138, +), CAediting_653049(99581165, +), CAediting_653050(99586734, +), CAediting_653051(99592616, +), CAediting_653052(99592620, +), CAediting_653053(99592622, +), CAediting_653054(99592671, +), CAediting_653055(99592676, +), CAediting_653056(99592750, +), CAediting_653057(99592809, +), CAediting_653058(99592906, +), CAediting_653059(99592982, +), CAediting_653060(99593007, +), CAediting_653061(99593008, +), CAediting_653062(99593051, +), CAediting_653063(99593079, +), CAediting_653064(99593740, +), CAediting_653065(99606483, +), CAediting_653066(99606511, +), CAediting_653067(99606514, +), CAediting_653068(99614884, +), CAediting_653069(99614974, +), CAediting_653070(99615032, +), CAediting_653071(99620856, +), CAediting_653072(99620879, +), CAediting_653073(99620888, +), CAediting_653074(99620895, +), CAediting_653075(99620897, +), CAediting_653076(99620907, +), CAediting_653077(99625511, +), CAediting_653078(99625787, +), CAediting_653079(99639756, +), CAediting_653080(99639761, +), CAediting_653081(99639764, +), CAediting_653082(99639775, +), CAediting_653083(99639785, +), CAediting_653084(99639806, +), CAediting_653085(99639813, +), CAediting_653086(99639818, +), CAediting_653087(99639819, +), CAediting_653088(99639821, +), CAediting_653089(99639823, +), CAediting_653090(99639850, +), CAediting_653091(99639851, +), CAediting_653092(99639874, +), CAediting_653093(99639934, +), CAediting_653094(99640338, +), CAediting_653095(99640384, +), CAediting_653096(99640406, +), CAediting_653097(99640432, +), CAediting_653098(99640458, +), CAediting_653099(99640468, +), CAediting_653100(99640506, +), CAediting_653101(99662486, +), CAediting_653102(99662576, +), CAediting_653103(99662586, +), CAediting_653104(99662937, +), CAediting_653105(99731784, +), CAediting_653106(99746426, +), CAediting_653107(99746448, +), CAediting_653108(99746462, +), CAediting_653109(99746463, +), CAediting_653110(99746479, +), CAediting_653111(99746500, +), CAediting_653112(99746507, +), CAediting_653113(99746508, +), CAediting_653114(99746534, +), CAediting_653115(99746535, +), CAediting_653116(99746542, +), CAediting_653117(99746571, +), CAediting_653118(99748842, +), CAediting_653119(99748873, +), CAediting_653120(99748874, +), CAediting_653121(99748880, +), CAediting_653122(99748959, +), CAediting_653123(99762874, +), CAediting_653124(99762876, +), CAediting_653125(99762991, +), CAediting_653126(99762995, +), CAediting_653127(99762999, +), CAediting_653128(99763038, +), CAediting_653129(99763039, +), CAediting_653130(99763066, +), CAediting_653131(99763069, +), CAediting_653132(99763070, +), CAediting_653133(99763088, +), CAediting_653134(99763091, +), CAediting_653135(99763093, +), CAediting_653136(99763096, +), CAediting_653137(99816534, +), CAediting_653138(99816537, +), CAediting_653139(99816542, +), CAediting_653140(99816550, +), CAediting_653141(99816615, +), CAediting_653142(99842351, +), CAediting_653143(99842352, +), CAediting_653144(99842508, +), CAediting_653145(99842516, +), CAediting_653146(99842517, +), CAediting_653147(99842924, +), CAediting_653148(99842928, +), CAediting_653149(99844638, +),

Top

RNA editing positional annotations for VPS13B using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_652713	chr8_99015711_+	intronic
CAediting_652714	chr8_99021656_+	intronic
CAediting_652715	chr8_99021718_+	intronic
CAediting_652716	chr8_99021724_+	intronic
CAediting_652717	chr8_99021725_+	intronic
CAediting_652718	chr8_99041649_+	intronic
CAediting_652719	chr8_99056182_+	intronic
CAediting_652720	chr8_99056183_+	intronic
CAediting_652721	chr8_99056186_+	intronic
CAediting_652722	chr8_99059262_+	intronic
CAediting_652723	chr8_99059894_+	intronic
CAediting_652724	chr8_99059933_+	intronic
CAediting_652725	chr8_99060530_+	intronic
CAediting_652726	chr8_99065211_+	intronic
CAediting_652727	chr8_99065212_+	intronic
CAediting_652728	chr8_99065277_+	intronic
CAediting_652729	chr8_99065281_+	intronic
CAediting_652730	chr8_99067538_+	intronic
CAediting_652731	chr8_99067587_+	intronic
CAediting_652732	chr8_99069303_+	intronic
CAediting_652733	chr8_99069306_+	intronic
CAediting_652734	chr8_99069313_+	intronic
CAediting_652735	chr8_99069340_+	intronic
CAediting_652736	chr8_99069973_+	intronic
CAediting_652737	chr8_99070054_+	intronic
CAediting_652738	chr8_99106314_+	ncRNA_intronic
CAediting_652739	chr8_99106315_+	ncRNA_intronic
CAediting_652740	chr8_99121932_+	intronic
CAediting_652741	chr8_99122127_+	intronic
CAediting_652742	chr8_99122849_+	intronic
CAediting_652743	chr8_99122857_+	intronic
CAediting_652744	chr8_99122858_+	intronic
CAediting_652745	chr8_99122863_+	intronic
CAediting_652746	chr8_99122907_+	intronic
CAediting_652747	chr8_99122912_+	intronic
CAediting_652748	chr8_99122917_+	intronic
CAediting_652749	chr8_99122923_+	intronic
CAediting_652750	chr8_99122926_+	intronic
CAediting_652751	chr8_99122927_+	intronic
CAediting_652752	chr8_99122929_+	intronic
CAediting_652753	chr8_99122937_+	intronic
CAediting_652754	chr8_99122974_+	intronic
CAediting_652755	chr8_99123000_+	intronic
CAediting_652756	chr8_99123001_+	intronic
CAediting_652757	chr8_99123006_+	intronic
CAediting_652758	chr8_99123010_+	intronic
CAediting_652759	chr8_99123022_+	intronic
CAediting_652760	chr8_99123027_+	intronic
CAediting_652761	chr8_99123032_+	intronic
CAediting_652762	chr8_99123042_+	intronic
CAediting_652763	chr8_99123071_+	intronic
CAediting_652764	chr8_99123086_+	intronic
CAediting_652765	chr8_99124632_+	intronic
CAediting_652766	chr8_99124708_+	intronic
CAediting_652767	chr8_99124755_+	intronic
CAediting_652768	chr8_99124761_+	intronic
CAediting_652769	chr8_99124762_+	intronic
CAediting_652770	chr8_99124771_+	intronic
CAediting_652771	chr8_99126836_+	intronic
CAediting_652772	chr8_99126838_+	intronic
CAediting_652773	chr8_99126844_+	intronic
CAediting_652774	chr8_99126852_+	intronic
CAediting_652775	chr8_99126874_+	intronic
CAediting_652776	chr8_99126893_+	intronic
CAediting_652777	chr8_99126918_+	intronic
CAediting_652778	chr8_99126929_+	intronic
CAediting_652779	chr8_99126934_+	intronic
CAediting_652780	chr8_99126935_+	intronic
CAediting_652781	chr8_99126936_+	intronic
CAediting_652782	chr8_99126939_+	intronic
CAediting_652783	chr8_99126944_+	intronic
CAediting_652784	chr8_99126945_+	intronic
CAediting_652785	chr8_99126948_+	intronic
CAediting_652786	chr8_99126952_+	intronic
CAediting_652787	chr8_99126953_+	intronic
CAediting_652788	chr8_99126956_+	intronic
CAediting_652789	chr8_99126974_+	intronic
CAediting_652790	chr8_99126984_+	intronic
CAediting_652791	chr8_99126988_+	intronic
CAediting_652792	chr8_99127029_+	intronic
CAediting_652793	chr8_99127050_+	intronic
CAediting_652794	chr8_99127119_+	intronic
CAediting_652795	chr8_99128127_+	intronic
CAediting_652796	chr8_99128136_+	intronic
CAediting_652797	chr8_99128171_+	intronic
CAediting_652798	chr8_99128179_+	intronic
CAediting_652799	chr8_99128193_+	intronic
CAediting_652800	chr8_99128203_+	intronic
CAediting_652801	chr8_99128210_+	intronic
CAediting_652802	chr8_99128211_+	intronic
CAediting_652803	chr8_99128222_+	intronic
CAediting_652804	chr8_99128226_+	intronic
CAediting_652805	chr8_99128227_+	intronic
CAediting_652806	chr8_99128228_+	intronic
CAediting_652807	chr8_99128231_+	intronic
CAediting_652808	chr8_99128233_+	intronic
CAediting_652809	chr8_99128236_+	intronic
CAediting_652810	chr8_99128237_+	intronic
CAediting_652811	chr8_99128240_+	intronic
CAediting_652812	chr8_99128256_+	intronic
CAediting_652813	chr8_99128266_+	intronic
CAediting_652814	chr8_99128267_+	intronic
CAediting_652815	chr8_99128276_+	intronic
CAediting_652816	chr8_99128290_+	intronic
CAediting_652817	chr8_99128299_+	intronic
CAediting_652818	chr8_99128307_+	intronic
CAediting_652819	chr8_99128308_+	intronic
CAediting_652820	chr8_99128369_+	intronic
CAediting_652821	chr8_99128375_+	intronic
CAediting_652822	chr8_99128951_+	intronic
CAediting_652823	chr8_99129421_+	intronic
CAediting_652824	chr8_99129424_+	intronic
CAediting_652825	chr8_99129447_+	intronic
CAediting_652826	chr8_99129461_+	intronic
CAediting_652827	chr8_99129471_+	intronic
CAediting_652828	chr8_99129488_+	intronic
CAediting_652829	chr8_99129524_+	intronic
CAediting_652830	chr8_99129554_+	intronic
CAediting_652831	chr8_99129873_+	intronic
CAediting_652832	chr8_99129882_+	intronic
CAediting_652833	chr8_99129895_+	intronic
CAediting_652834	chr8_99129919_+	intronic
CAediting_652835	chr8_99130004_+	intronic
CAediting_652836	chr8_99130419_+	intronic
CAediting_652837	chr8_99130492_+	intronic
CAediting_652838	chr8_99130527_+	intronic
CAediting_652839	chr8_99130529_+	intronic
CAediting_652840	chr8_99131916_+	intronic
CAediting_652841	chr8_99131971_+	intronic
CAediting_652842	chr8_99131976_+	intronic
CAediting_652843	chr8_99131977_+	intronic
CAediting_652844	chr8_99131997_+	intronic
CAediting_652845	chr8_99132026_+	intronic
CAediting_652846	chr8_99132062_+	intronic
CAediting_652847	chr8_99132063_+	intronic
CAediting_652848	chr8_99132106_+	intronic
CAediting_652849	chr8_99132117_+	intronic
CAediting_652850	chr8_99132140_+	intronic
CAediting_652851	chr8_99132159_+	intronic
CAediting_652852	chr8_99132171_+	intronic
CAediting_652853	chr8_99132173_+	intronic
CAediting_652854	chr8_99139491_+	intronic
CAediting_652855	chr8_99139644_+	intronic
CAediting_652856	chr8_99140111_+	intronic
CAediting_652857	chr8_99140142_+	intronic
CAediting_652858	chr8_99140155_+	intronic
CAediting_652859	chr8_99140234_+	intronic
CAediting_652860	chr8_99140245_+	intronic
CAediting_652861	chr8_99140286_+	intronic
CAediting_652862	chr8_99141932_+	intronic
CAediting_652863	chr8_99148257_+	intronic
CAediting_652864	chr8_99148266_+	intronic
CAediting_652865	chr8_99148284_+	intronic
CAediting_652866	chr8_99148310_+	intronic
CAediting_652867	chr8_99148313_+	intronic
CAediting_652868	chr8_99148327_+	intronic
CAediting_652869	chr8_99151767_+	intronic
CAediting_652870	chr8_99158426_+	ncRNA_intronic
CAediting_652871	chr8_99159844_+	ncRNA_intronic
CAediting_652872	chr8_99159941_+	ncRNA_intronic
CAediting_652873	chr8_99160395_+	ncRNA_intronic
CAediting_652874	chr8_99160404_+	ncRNA_intronic
CAediting_652875	chr8_99160418_+	ncRNA_intronic
CAediting_652876	chr8_99160483_+	ncRNA_intronic
CAediting_652877	chr8_99160494_+	ncRNA_intronic
CAediting_652878	chr8_99160497_+	ncRNA_intronic
CAediting_652879	chr8_99160498_+	ncRNA_intronic
CAediting_652880	chr8_99160499_+	ncRNA_intronic
CAediting_652881	chr8_99160503_+	ncRNA_intronic
CAediting_652882	chr8_99160507_+	ncRNA_intronic
CAediting_652883	chr8_99160512_+	ncRNA_intronic
CAediting_652884	chr8_99160558_+	ncRNA_intronic
CAediting_652885	chr8_99160571_+	ncRNA_intronic
CAediting_652886	chr8_99160576_+	ncRNA_intronic
CAediting_652887	chr8_99160621_+	ncRNA_intronic
CAediting_652888	chr8_99160626_+	ncRNA_intronic
CAediting_652889	chr8_99160630_+	ncRNA_intronic
CAediting_652890	chr8_99191517_+	ncRNA_intronic
CAediting_652891	chr8_99191525_+	ncRNA_intronic
CAediting_652892	chr8_99209158_+	ncRNA_intronic
CAediting_652893	chr8_99209228_+	ncRNA_intronic
CAediting_652894	chr8_99209659_+	exonic
CAediting_652895	chr8_99210707_+	ncRNA_intronic
CAediting_652896	chr8_99210708_+	ncRNA_intronic
CAediting_652897	chr8_99210718_+	ncRNA_intronic
CAediting_652898	chr8_99210731_+	ncRNA_intronic
CAediting_652899	chr8_99211600_+	ncRNA_intronic
CAediting_652900	chr8_99211615_+	ncRNA_intronic
CAediting_652901	chr8_99211617_+	ncRNA_intronic
CAediting_652902	chr8_99211619_+	ncRNA_intronic
CAediting_652903	chr8_99211630_+	ncRNA_intronic
CAediting_652904	chr8_99211656_+	ncRNA_intronic
CAediting_652905	chr8_99211667_+	ncRNA_intronic
CAediting_652906	chr8_99212010_+	ncRNA_intronic
CAediting_652907	chr8_99245764_+	intronic
CAediting_652908	chr8_99246684_+	intronic
CAediting_652909	chr8_99267544_+	intronic
CAediting_652910	chr8_99267593_+	intronic
CAediting_652911	chr8_99267647_+	intronic
CAediting_652912	chr8_99267672_+	intronic
CAediting_652913	chr8_99269098_+	intronic
CAediting_652914	chr8_99271589_+	intronic
CAediting_652915	chr8_99279101_+	ncRNA_intronic
CAediting_652916	chr8_99279118_+	ncRNA_intronic
CAediting_652917	chr8_99279171_+	ncRNA_intronic
CAediting_652918	chr8_99279188_+	ncRNA_intronic
CAediting_652919	chr8_99279189_+	ncRNA_intronic
CAediting_652920	chr8_99279194_+	ncRNA_intronic
CAediting_652921	chr8_99279292_+	ncRNA_intronic
CAediting_652922	chr8_99280031_+	ncRNA_intronic
CAediting_652923	chr8_99288915_+	ncRNA_intronic
CAediting_652924	chr8_99288928_+	ncRNA_intronic
CAediting_652925	chr8_99288942_+	ncRNA_intronic
CAediting_652926	chr8_99288950_+	ncRNA_intronic
CAediting_652927	chr8_99288958_+	ncRNA_intronic
CAediting_652928	chr8_99288977_+	ncRNA_intronic
CAediting_652929	chr8_99298354_+	ncRNA_intronic
CAediting_652930	chr8_99299314_+	ncRNA_intronic
CAediting_652931	chr8_99299656_+	ncRNA_intronic
CAediting_652932	chr8_99301094_+	ncRNA_intronic
CAediting_652933	chr8_99301130_+	ncRNA_intronic
CAediting_652934	chr8_99301135_+	ncRNA_intronic
CAediting_652935	chr8_99301156_+	ncRNA_intronic
CAediting_652936	chr8_99301373_+	ncRNA_intronic
CAediting_652937	chr8_99302590_+	ncRNA_intronic
CAediting_652938	chr8_99302609_+	ncRNA_intronic
CAediting_652939	chr8_99302610_+	ncRNA_intronic
CAediting_652940	chr8_99302613_+	ncRNA_intronic
CAediting_652941	chr8_99302635_+	ncRNA_intronic
CAediting_652942	chr8_99302649_+	ncRNA_intronic
CAediting_652943	chr8_99302666_+	ncRNA_intronic
CAediting_652944	chr8_99302772_+	ncRNA_intronic
CAediting_652945	chr8_99303025_+	ncRNA_intronic
CAediting_652946	chr8_99303026_+	ncRNA_intronic
CAediting_652947	chr8_99303031_+	ncRNA_intronic
CAediting_652948	chr8_99303080_+	ncRNA_intronic
CAediting_652949	chr8_99303093_+	ncRNA_intronic
CAediting_652950	chr8_99303095_+	ncRNA_intronic
CAediting_652951	chr8_99303114_+	ncRNA_intronic
CAediting_652952	chr8_99303118_+	ncRNA_intronic
CAediting_652953	chr8_99303120_+	ncRNA_intronic
CAediting_652954	chr8_99303121_+	ncRNA_intronic
CAediting_652955	chr8_99303123_+	ncRNA_intronic
CAediting_652956	chr8_99303128_+	ncRNA_intronic
CAediting_652957	chr8_99303129_+	ncRNA_intronic
CAediting_652958	chr8_99303130_+	ncRNA_intronic
CAediting_652959	chr8_99303159_+	ncRNA_intronic
CAediting_652960	chr8_99303160_+	ncRNA_intronic
CAediting_652961	chr8_99303165_+	ncRNA_intronic
CAediting_652962	chr8_99303176_+	ncRNA_intronic
CAediting_652963	chr8_99303186_+	ncRNA_intronic
CAediting_652964	chr8_99303200_+	ncRNA_intronic
CAediting_652965	chr8_99303201_+	ncRNA_intronic
CAediting_652966	chr8_99303608_+	ncRNA_intronic
CAediting_652967	chr8_99303618_+	ncRNA_intronic
CAediting_652968	chr8_99303623_+	ncRNA_intronic
CAediting_652969	chr8_99303630_+	ncRNA_intronic
CAediting_652970	chr8_99303641_+	ncRNA_intronic
CAediting_652971	chr8_99303649_+	ncRNA_intronic
CAediting_652972	chr8_99303650_+	ncRNA_intronic
CAediting_652973	chr8_99303670_+	ncRNA_intronic
CAediting_652974	chr8_99303674_+	ncRNA_intronic
CAediting_652975	chr8_99303681_+	ncRNA_intronic
CAediting_652976	chr8_99353167_+	ncRNA_intronic
CAediting_652977	chr8_99353274_+	ncRNA_intronic
CAediting_652978	chr8_99387406_+	ncRNA_intronic
CAediting_652979	chr8_99387420_+	ncRNA_intronic
CAediting_652980	chr8_99387425_+	ncRNA_intronic
CAediting_652981	chr8_99387451_+	ncRNA_intronic
CAediting_652982	chr8_99387475_+	ncRNA_intronic
CAediting_652983	chr8_99388939_+	ncRNA_intronic
CAediting_652984	chr8_99401745_+	ncRNA_intronic
CAediting_652985	chr8_99403438_+	ncRNA_intronic
CAediting_652986	chr8_99403442_+	ncRNA_intronic
CAediting_652987	chr8_99403446_+	ncRNA_intronic
CAediting_652988	chr8_99403461_+	ncRNA_intronic
CAediting_652989	chr8_99437463_+	ncRNA_intronic
CAediting_652990	chr8_99444404_+	intronic
CAediting_652991	chr8_99444413_+	intronic
CAediting_652992	chr8_99444414_+	intronic
CAediting_652993	chr8_99444417_+	intronic
CAediting_652994	chr8_99444444_+	intronic
CAediting_652995	chr8_99444474_+	intronic
CAediting_652996	chr8_99444478_+	intronic
CAediting_652997	chr8_99444480_+	intronic
CAediting_652998	chr8_99444744_+	intronic
CAediting_652999	chr8_99445727_+	intronic
CAediting_653000	chr8_99449840_+	intronic
CAediting_653001	chr8_99449904_+	intronic
CAediting_653002	chr8_99449908_+	intronic
CAediting_653003	chr8_99449939_+	intronic
CAediting_653004	chr8_99449966_+	intronic
CAediting_653005	chr8_99449971_+	intronic
CAediting_653006	chr8_99449979_+	intronic
CAediting_653007	chr8_99449985_+	intronic
CAediting_653008	chr8_99449992_+	intronic
CAediting_653009	chr8_99450014_+	intronic
CAediting_653010	chr8_99450046_+	intronic
CAediting_653011	chr8_99450490_+	intronic
CAediting_653012	chr8_99450497_+	intronic
CAediting_653013	chr8_99450566_+	intronic
CAediting_653014	chr8_99454240_+	intronic
CAediting_653015	chr8_99493523_+	intronic
CAediting_653016	chr8_99493634_+	intronic
CAediting_653017	chr8_99493697_+	intronic
CAediting_653018	chr8_99502034_+	intronic
CAediting_653019	chr8_99502102_+	intronic
CAediting_653020	chr8_99539490_+	intronic
CAediting_653021	chr8_99539512_+	intronic
CAediting_653022	chr8_99539617_+	intronic
CAediting_653023	chr8_99541469_+	intronic
CAediting_653024	chr8_99562533_+	intronic
CAediting_653025	chr8_99562941_+	intronic
CAediting_653026	chr8_99562954_+	intronic
CAediting_653027	chr8_99562964_+	intronic
CAediting_653028	chr8_99563016_+	intronic
CAediting_653029	chr8_99563082_+	intronic
CAediting_653030	chr8_99563112_+	intronic
CAediting_653031	chr8_99569306_+	intronic
CAediting_653032	chr8_99569308_+	intronic
CAediting_653033	chr8_99569349_+	intronic
CAediting_653034	chr8_99569354_+	intronic
CAediting_653035	chr8_99579754_+	intronic
CAediting_653036	chr8_99579950_+	intronic
CAediting_653037	chr8_99580663_+	intronic
CAediting_653038	chr8_99580668_+	intronic
CAediting_653039	chr8_99580731_+	intronic
CAediting_653040	chr8_99580767_+	intronic
CAediting_653041	chr8_99580778_+	intronic
CAediting_653042	chr8_99580786_+	intronic
CAediting_653043	chr8_99580966_+	intronic
CAediting_653044	chr8_99581089_+	intronic
CAediting_653045	chr8_99581098_+	intronic
CAediting_653046	chr8_99581132_+	intronic
CAediting_653047	chr8_99581133_+	intronic
CAediting_653048	chr8_99581138_+	intronic
CAediting_653049	chr8_99581165_+	intronic
CAediting_653050	chr8_99586734_+	intronic
CAediting_653051	chr8_99592616_+	intronic
CAediting_653052	chr8_99592620_+	intronic
CAediting_653053	chr8_99592622_+	intronic
CAediting_653054	chr8_99592671_+	intronic
CAediting_653055	chr8_99592676_+	intronic
CAediting_653056	chr8_99592750_+	intronic
CAediting_653057	chr8_99592809_+	intronic
CAediting_653058	chr8_99592906_+	intronic
CAediting_653059	chr8_99592982_+	intronic
CAediting_653060	chr8_99593007_+	intronic
CAediting_653061	chr8_99593008_+	intronic
CAediting_653062	chr8_99593051_+	intronic
CAediting_653063	chr8_99593079_+	intronic
CAediting_653064	chr8_99593740_+	intronic
CAediting_653065	chr8_99606483_+	intronic
CAediting_653066	chr8_99606511_+	intronic
CAediting_653067	chr8_99606514_+	intronic
CAediting_653068	chr8_99614884_+	intronic
CAediting_653069	chr8_99614974_+	intronic
CAediting_653070	chr8_99615032_+	intronic
CAediting_653071	chr8_99620856_+	intronic
CAediting_653072	chr8_99620879_+	intronic
CAediting_653073	chr8_99620888_+	intronic
CAediting_653074	chr8_99620895_+	intronic
CAediting_653075	chr8_99620897_+	intronic
CAediting_653076	chr8_99620907_+	intronic
CAediting_653077	chr8_99625511_+	intronic
CAediting_653078	chr8_99625787_+	intronic
CAediting_653079	chr8_99639756_+	intronic
CAediting_653080	chr8_99639761_+	intronic
CAediting_653081	chr8_99639764_+	intronic
CAediting_653082	chr8_99639775_+	intronic
CAediting_653083	chr8_99639785_+	intronic
CAediting_653084	chr8_99639806_+	intronic
CAediting_653085	chr8_99639813_+	intronic
CAediting_653086	chr8_99639818_+	intronic
CAediting_653087	chr8_99639819_+	intronic
CAediting_653088	chr8_99639821_+	intronic
CAediting_653089	chr8_99639823_+	intronic
CAediting_653090	chr8_99639850_+	intronic
CAediting_653091	chr8_99639851_+	intronic
CAediting_653092	chr8_99639874_+	intronic
CAediting_653093	chr8_99639934_+	intronic
CAediting_653094	chr8_99640338_+	intronic
CAediting_653095	chr8_99640384_+	intronic
CAediting_653096	chr8_99640406_+	intronic
CAediting_653097	chr8_99640432_+	intronic
CAediting_653098	chr8_99640458_+	intronic
CAediting_653099	chr8_99640468_+	intronic
CAediting_653100	chr8_99640506_+	intronic
CAediting_653101	chr8_99662486_+	intronic
CAediting_653102	chr8_99662576_+	intronic
CAediting_653103	chr8_99662586_+	intronic
CAediting_653104	chr8_99662937_+	intronic
CAediting_653105	chr8_99731784_+	ncRNA_intronic
CAediting_653106	chr8_99746426_+	ncRNA_intronic
CAediting_653107	chr8_99746448_+	ncRNA_intronic
CAediting_653108	chr8_99746462_+	ncRNA_intronic
CAediting_653109	chr8_99746463_+	ncRNA_intronic
CAediting_653110	chr8_99746479_+	ncRNA_intronic
CAediting_653111	chr8_99746500_+	ncRNA_intronic
CAediting_653112	chr8_99746507_+	ncRNA_intronic
CAediting_653113	chr8_99746508_+	ncRNA_intronic
CAediting_653114	chr8_99746534_+	ncRNA_intronic
CAediting_653115	chr8_99746535_+	ncRNA_intronic
CAediting_653116	chr8_99746542_+	ncRNA_intronic
CAediting_653117	chr8_99746571_+	ncRNA_intronic
CAediting_653118	chr8_99748842_+	ncRNA_intronic
CAediting_653119	chr8_99748873_+	ncRNA_intronic
CAediting_653120	chr8_99748874_+	ncRNA_intronic
CAediting_653121	chr8_99748880_+	ncRNA_intronic
CAediting_653122	chr8_99748959_+	ncRNA_intronic
CAediting_653123	chr8_99762874_+	ncRNA_intronic
CAediting_653124	chr8_99762876_+	ncRNA_intronic
CAediting_653125	chr8_99762991_+	ncRNA_intronic
CAediting_653126	chr8_99762995_+	ncRNA_intronic
CAediting_653127	chr8_99762999_+	ncRNA_intronic
CAediting_653128	chr8_99763038_+	ncRNA_intronic
CAediting_653129	chr8_99763039_+	ncRNA_intronic
CAediting_653130	chr8_99763066_+	ncRNA_intronic
CAediting_653131	chr8_99763069_+	ncRNA_intronic
CAediting_653132	chr8_99763070_+	ncRNA_intronic
CAediting_653133	chr8_99763088_+	ncRNA_intronic
CAediting_653134	chr8_99763091_+	ncRNA_intronic
CAediting_653135	chr8_99763093_+	ncRNA_intronic
CAediting_653136	chr8_99763096_+	ncRNA_intronic
CAediting_653137	chr8_99816534_+	intronic
CAediting_653138	chr8_99816537_+	intronic
CAediting_653139	chr8_99816542_+	intronic
CAediting_653140	chr8_99816550_+	intronic
CAediting_653141	chr8_99816615_+	intronic
CAediting_653142	chr8_99842351_+	intronic
CAediting_653143	chr8_99842352_+	intronic
CAediting_653144	chr8_99842508_+	intronic
CAediting_653145	chr8_99842516_+	intronic
CAediting_653146	chr8_99842517_+	intronic
CAediting_653147	chr8_99842924_+	intronic
CAediting_653148	chr8_99842928_+	intronic
CAediting_653149	chr8_99844638_+	intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_652713	chr8_99015711_+	SINE	Alu	AluSx3
CAediting_652714	chr8_99021656_+	SINE	Alu	AluJb
CAediting_652715	chr8_99021718_+	SINE	Alu	AluJb
CAediting_652716	chr8_99021724_+	SINE	Alu	AluJb
CAediting_652717	chr8_99021725_+	SINE	Alu	AluJb
CAediting_652718	chr8_99041649_+	SINE	Alu	AluY
CAediting_652719	chr8_99056182_+	SINE	Alu	AluJb
CAediting_652720	chr8_99056183_+	SINE	Alu	AluJb
CAediting_652721	chr8_99056186_+	SINE	Alu	AluJb
CAediting_652722	chr8_99059262_+	SINE	Alu	AluSx3
CAediting_652723	chr8_99059894_+	SINE	Alu	AluSx
CAediting_652724	chr8_99059933_+	SINE	Alu	AluSx
CAediting_652725	chr8_99060530_+	SINE	Alu	AluSx1
CAediting_652726	chr8_99065211_+	LINE	L1	L1PA6
CAediting_652727	chr8_99065212_+	LINE	L1	L1PA6
CAediting_652728	chr8_99065277_+	LINE	L1	L1PA6
CAediting_652729	chr8_99065281_+	LINE	L1	L1PA6
CAediting_652730	chr8_99067538_+	LINE	L1	L1PA6
CAediting_652731	chr8_99067587_+	LINE	L1	L1PA6
CAediting_652732	chr8_99069303_+	SINE	Alu	AluJb
CAediting_652733	chr8_99069306_+	SINE	Alu	AluJb
CAediting_652734	chr8_99069313_+	SINE	Alu	AluJb
CAediting_652735	chr8_99069340_+	SINE	Alu	AluJb
CAediting_652736	chr8_99069973_+	SINE	Alu	AluJo
CAediting_652737	chr8_99070054_+	SINE	Alu	AluJo
CAediting_652738	chr8_99106314_+	SINE	Alu	AluSx1
CAediting_652739	chr8_99106315_+	SINE	Alu	AluSx1
CAediting_652740	chr8_99121932_+	SINE	Alu	AluJb
CAediting_652741	chr8_99122127_+	SINE	Alu	AluJb
CAediting_652742	chr8_99122849_+	SINE	Alu	AluSp
CAediting_652743	chr8_99122857_+	SINE	Alu	AluSp
CAediting_652744	chr8_99122858_+	SINE	Alu	AluSp
CAediting_652745	chr8_99122863_+	SINE	Alu	AluSp
CAediting_652746	chr8_99122907_+	SINE	Alu	AluSp
CAediting_652747	chr8_99122912_+	SINE	Alu	AluSp
CAediting_652748	chr8_99122917_+	SINE	Alu	AluSp
CAediting_652749	chr8_99122923_+	SINE	Alu	AluSp
CAediting_652750	chr8_99122926_+	SINE	Alu	AluSp
CAediting_652751	chr8_99122927_+	SINE	Alu	AluSp
CAediting_652752	chr8_99122929_+	SINE	Alu	AluSp
CAediting_652753	chr8_99122937_+	SINE	Alu	AluSp
CAediting_652754	chr8_99122974_+	SINE	Alu	AluSp
CAediting_652755	chr8_99123000_+	SINE	Alu	AluSp
CAediting_652756	chr8_99123001_+	SINE	Alu	AluSp
CAediting_652757	chr8_99123006_+	SINE	Alu	AluSp
CAediting_652758	chr8_99123010_+	SINE	Alu	AluSp
CAediting_652759	chr8_99123022_+	SINE	Alu	AluSp
CAediting_652760	chr8_99123027_+	SINE	Alu	AluSp
CAediting_652761	chr8_99123032_+	SINE	Alu	AluSp
CAediting_652762	chr8_99123042_+	SINE	Alu	AluSp
CAediting_652763	chr8_99123071_+	SINE	Alu	AluSp
CAediting_652764	chr8_99123086_+	SINE	Alu	AluSp
CAediting_652765	chr8_99124632_+	SINE	Alu	AluSq2
CAediting_652766	chr8_99124708_+	SINE	Alu	AluSq2
CAediting_652767	chr8_99124755_+	SINE	Alu	AluSq2
CAediting_652768	chr8_99124761_+	SINE	Alu	AluSq2
CAediting_652769	chr8_99124762_+	SINE	Alu	AluSq2
CAediting_652770	chr8_99124771_+	SINE	Alu	AluSq2
CAediting_652771	chr8_99126836_+	SINE	Alu	AluJb
CAediting_652772	chr8_99126838_+	SINE	Alu	AluJb
CAediting_652773	chr8_99126844_+	SINE	Alu	AluJb
CAediting_652774	chr8_99126852_+	SINE	Alu	AluJb
CAediting_652775	chr8_99126874_+	SINE	Alu	AluJb
CAediting_652776	chr8_99126893_+	SINE	Alu	AluJb
CAediting_652777	chr8_99126918_+	SINE	Alu	AluJb
CAediting_652778	chr8_99126929_+	SINE	Alu	AluJb
CAediting_652779	chr8_99126934_+	SINE	Alu	AluJb
CAediting_652780	chr8_99126935_+	SINE	Alu	AluJb
CAediting_652781	chr8_99126936_+	SINE	Alu	AluJb
CAediting_652782	chr8_99126939_+	SINE	Alu	AluJb
CAediting_652783	chr8_99126944_+	SINE	Alu	AluJb
CAediting_652784	chr8_99126945_+	SINE	Alu	AluJb
CAediting_652785	chr8_99126948_+	SINE	Alu	AluJb
CAediting_652786	chr8_99126952_+	SINE	Alu	AluJb
CAediting_652787	chr8_99126953_+	SINE	Alu	AluJb
CAediting_652788	chr8_99126956_+	SINE	Alu	AluJb
CAediting_652789	chr8_99126974_+	SINE	Alu	AluJb
CAediting_652790	chr8_99126984_+	SINE	Alu	AluJb
CAediting_652791	chr8_99126988_+	SINE	Alu	AluJb
CAediting_652792	chr8_99127029_+	SINE	Alu	AluJb
CAediting_652793	chr8_99127050_+	SINE	Alu	AluJb
CAediting_652794	chr8_99127119_+	SINE	Alu	AluJb
CAediting_652795	chr8_99128127_+	SINE	Alu	AluSx1
CAediting_652796	chr8_99128136_+	SINE	Alu	AluSx1
CAediting_652797	chr8_99128171_+	SINE	Alu	AluSx1
CAediting_652798	chr8_99128179_+	SINE	Alu	AluSx1
CAediting_652799	chr8_99128193_+	SINE	Alu	AluSx1
CAediting_652800	chr8_99128203_+	SINE	Alu	AluSx1
CAediting_652801	chr8_99128210_+	SINE	Alu	AluSx1
CAediting_652802	chr8_99128211_+	SINE	Alu	AluSx1
CAediting_652803	chr8_99128222_+	SINE	Alu	AluSx1
CAediting_652804	chr8_99128226_+	SINE	Alu	AluSx1
CAediting_652805	chr8_99128227_+	SINE	Alu	AluSx1
CAediting_652806	chr8_99128228_+	SINE	Alu	AluSx1
CAediting_652807	chr8_99128231_+	SINE	Alu	AluSx1
CAediting_652808	chr8_99128233_+	SINE	Alu	AluSx1
CAediting_652809	chr8_99128236_+	SINE	Alu	AluSx1
CAediting_652810	chr8_99128237_+	SINE	Alu	AluSx1
CAediting_652811	chr8_99128240_+	SINE	Alu	AluSx1
CAediting_652812	chr8_99128256_+	SINE	Alu	AluSx1
CAediting_652813	chr8_99128266_+	SINE	Alu	AluSx1
CAediting_652814	chr8_99128267_+	SINE	Alu	AluSx1
CAediting_652815	chr8_99128276_+	SINE	Alu	AluSx1
CAediting_652816	chr8_99128290_+	SINE	Alu	AluSx1
CAediting_652817	chr8_99128299_+	SINE	Alu	AluSx1
CAediting_652818	chr8_99128307_+	SINE	Alu	AluSx1
CAediting_652819	chr8_99128308_+	SINE	Alu	AluSx1
CAediting_652820	chr8_99128369_+	SINE	Alu	AluSx1
CAediting_652821	chr8_99128375_+	SINE	Alu	AluSx1
CAediting_652822	chr8_99128951_+	SINE	Alu	AluSx4
CAediting_652823	chr8_99129421_+	SINE	Alu	AluJr
CAediting_652824	chr8_99129424_+	SINE	Alu	AluJr
CAediting_652825	chr8_99129447_+	SINE	Alu	AluJr
CAediting_652826	chr8_99129461_+	SINE	Alu	AluJr
CAediting_652827	chr8_99129471_+	SINE	Alu	AluJr
CAediting_652828	chr8_99129488_+	SINE	Alu	AluJr
CAediting_652829	chr8_99129524_+	SINE	Alu	AluJr
CAediting_652830	chr8_99129554_+	SINE	Alu	AluJr
CAediting_652831	chr8_99129873_+	SINE	Alu	AluJr
CAediting_652832	chr8_99129882_+	SINE	Alu	AluJr
CAediting_652833	chr8_99129895_+	SINE	Alu	AluJr
CAediting_652834	chr8_99129919_+	SINE	Alu	AluJr
CAediting_652835	chr8_99130004_+	SINE	Alu	AluJr
CAediting_652836	chr8_99130419_+	SINE	Alu	AluY
CAediting_652837	chr8_99130492_+	SINE	Alu	AluY
CAediting_652838	chr8_99130527_+	SINE	Alu	AluY
CAediting_652839	chr8_99130529_+	SINE	Alu	AluY
CAediting_652840	chr8_99131916_+	SINE	Alu	AluSz6
CAediting_652841	chr8_99131971_+	SINE	Alu	AluSz6
CAediting_652842	chr8_99131976_+	SINE	Alu	AluSz6
CAediting_652843	chr8_99131977_+	SINE	Alu	AluSz6
CAediting_652844	chr8_99131997_+	SINE	Alu	AluSz6
CAediting_652845	chr8_99132026_+	SINE	Alu	AluSz6
CAediting_652846	chr8_99132062_+	SINE	Alu	AluSz6
CAediting_652847	chr8_99132063_+	SINE	Alu	AluSz6
CAediting_652848	chr8_99132106_+	SINE	Alu	AluSz6
CAediting_652849	chr8_99132117_+	SINE	Alu	AluSz6
CAediting_652850	chr8_99132140_+	SINE	Alu	AluSz6
CAediting_652851	chr8_99132159_+	SINE	Alu	AluSz6
CAediting_652852	chr8_99132171_+	SINE	Alu	AluSz6
CAediting_652853	chr8_99132173_+	SINE	Alu	AluSz6
CAediting_652854	chr8_99139491_+	SINE	Alu	AluY
CAediting_652855	chr8_99139644_+	SINE	Alu	AluY
CAediting_652856	chr8_99140111_+	SINE	Alu	AluSq4
CAediting_652857	chr8_99140142_+	SINE	Alu	AluSq4
CAediting_652858	chr8_99140155_+	SINE	Alu	AluSq4
CAediting_652859	chr8_99140234_+	SINE	Alu	AluSq4
CAediting_652860	chr8_99140245_+	SINE	Alu	AluSq4
CAediting_652861	chr8_99140286_+	SINE	Alu	AluSq4
CAediting_652862	chr8_99141932_+	SINE	Alu	AluY
CAediting_652863	chr8_99148257_+	SINE	Alu	AluJr
CAediting_652864	chr8_99148266_+	SINE	Alu	AluJr
CAediting_652865	chr8_99148284_+	SINE	Alu	AluJr
CAediting_652866	chr8_99148310_+	SINE	Alu	AluJr
CAediting_652867	chr8_99148313_+	SINE	Alu	AluJr
CAediting_652868	chr8_99148327_+	SINE	Alu	AluJr
CAediting_652869	chr8_99151767_+	SINE	Alu	AluSp
CAediting_652870	chr8_99158426_+	SINE	Alu	AluSx3
CAediting_652871	chr8_99159844_+	SINE	Alu	AluSx3
CAediting_652872	chr8_99159941_+	SINE	Alu	AluSx3
CAediting_652873	chr8_99160395_+	SINE	Alu	AluJb
CAediting_652874	chr8_99160404_+	SINE	Alu	AluJb
CAediting_652875	chr8_99160418_+	SINE	Alu	AluJb
CAediting_652876	chr8_99160483_+	SINE	Alu	AluJb
CAediting_652877	chr8_99160494_+	SINE	Alu	AluJb
CAediting_652878	chr8_99160497_+	SINE	Alu	AluJb
CAediting_652879	chr8_99160498_+	SINE	Alu	AluJb
CAediting_652880	chr8_99160499_+	SINE	Alu	AluJb
CAediting_652881	chr8_99160503_+	SINE	Alu	AluJb
CAediting_652882	chr8_99160507_+	SINE	Alu	AluJb
CAediting_652883	chr8_99160512_+	SINE	Alu	AluJb
CAediting_652884	chr8_99160558_+	SINE	Alu	AluJb
CAediting_652885	chr8_99160571_+	SINE	Alu	AluJb
CAediting_652886	chr8_99160576_+	SINE	Alu	AluJb
CAediting_652887	chr8_99160621_+	SINE	Alu	AluJb
CAediting_652888	chr8_99160626_+	SINE	Alu	AluJb
CAediting_652889	chr8_99160630_+	SINE	Alu	AluJb
CAediting_652890	chr8_99191517_+	SINE	Alu	AluSg
CAediting_652891	chr8_99191525_+	SINE	Alu	AluSg
CAediting_652892	chr8_99209158_+	SINE	Alu	AluSc
CAediting_652893	chr8_99209228_+	SINE	Alu	AluSc
CAediting_652894	chr8_99209659_+	SINE	Alu	FLAM_C
CAediting_652895	chr8_99210707_+	SINE	Alu	AluJb
CAediting_652896	chr8_99210708_+	SINE	Alu	AluJb
CAediting_652897	chr8_99210718_+	SINE	Alu	AluJb
CAediting_652898	chr8_99210731_+	SINE	Alu	AluJb
CAediting_652899	chr8_99211600_+	SINE	Alu	AluSc
CAediting_652900	chr8_99211615_+	SINE	Alu	AluSc
CAediting_652901	chr8_99211617_+	SINE	Alu	AluSc
CAediting_652902	chr8_99211619_+	SINE	Alu	AluSc
CAediting_652903	chr8_99211630_+	SINE	Alu	AluSc
CAediting_652904	chr8_99211656_+	SINE	Alu	AluSc
CAediting_652905	chr8_99211667_+	SINE	Alu	AluSc
CAediting_652906	chr8_99212010_+	SINE	Alu	AluSx1
CAediting_652907	chr8_99245764_+	SINE	Alu	AluSz6
CAediting_652908	chr8_99246684_+	SINE	Alu	AluSg
CAediting_652909	chr8_99267544_+	SINE	Alu	AluSc5
CAediting_652910	chr8_99267593_+	SINE	Alu	AluSc5
CAediting_652911	chr8_99267647_+	SINE	Alu	AluSc5
CAediting_652912	chr8_99267672_+	SINE	Alu	AluSc5
CAediting_652913	chr8_99269098_+	LTR	ERVL-MaLR	THE1C
CAediting_652914	chr8_99271589_+	LTR	ERVL-MaLR	THE1D
CAediting_652915	chr8_99279101_+	SINE	Alu	AluSx
CAediting_652916	chr8_99279118_+	SINE	Alu	AluSx
CAediting_652917	chr8_99279171_+	SINE	Alu	AluSx
CAediting_652918	chr8_99279188_+	SINE	Alu	AluSx
CAediting_652919	chr8_99279189_+	SINE	Alu	AluSx
CAediting_652920	chr8_99279194_+	SINE	Alu	AluSx
CAediting_652922	chr8_99280031_+	SINE	Alu	AluY
CAediting_652924	chr8_99288928_+	SINE	Alu	AluJo
CAediting_652925	chr8_99288942_+	SINE	Alu	AluJo
CAediting_652926	chr8_99288950_+	SINE	Alu	AluJo
CAediting_652927	chr8_99288958_+	SINE	Alu	AluJo
CAediting_652928	chr8_99288977_+	SINE	Alu	AluJo
CAediting_652929	chr8_99298354_+	SINE	Alu	AluSp
CAediting_652930	chr8_99299314_+	SINE	Alu	AluSq2
CAediting_652931	chr8_99299656_+	SINE	Alu	AluSx1
CAediting_652932	chr8_99301094_+	SINE	Alu	AluJb
CAediting_652933	chr8_99301130_+	SINE	Alu	AluJb
CAediting_652934	chr8_99301135_+	SINE	Alu	AluJb
CAediting_652935	chr8_99301156_+	SINE	Alu	AluJb
CAediting_652936	chr8_99301373_+	SINE	Alu	AluSp
CAediting_652937	chr8_99302590_+	SINE	Alu	AluSx
CAediting_652938	chr8_99302609_+	SINE	Alu	AluSx
CAediting_652939	chr8_99302610_+	SINE	Alu	AluSx
CAediting_652940	chr8_99302613_+	SINE	Alu	AluSx
CAediting_652941	chr8_99302635_+	SINE	Alu	AluSx
CAediting_652942	chr8_99302649_+	SINE	Alu	AluSx
CAediting_652943	chr8_99302666_+	SINE	Alu	AluSx
CAediting_652944	chr8_99302772_+	SINE	Alu	AluSx
CAediting_652945	chr8_99303025_+	SINE	Alu	AluSc8
CAediting_652946	chr8_99303026_+	SINE	Alu	AluSc8
CAediting_652947	chr8_99303031_+	SINE	Alu	AluSc8
CAediting_652948	chr8_99303080_+	SINE	Alu	AluSc8
CAediting_652949	chr8_99303093_+	SINE	Alu	AluSc8
CAediting_652950	chr8_99303095_+	SINE	Alu	AluSc8
CAediting_652951	chr8_99303114_+	SINE	Alu	AluSc8
CAediting_652952	chr8_99303118_+	SINE	Alu	AluSc8
CAediting_652953	chr8_99303120_+	SINE	Alu	AluSc8
CAediting_652954	chr8_99303121_+	SINE	Alu	AluSc8
CAediting_652955	chr8_99303123_+	SINE	Alu	AluSc8
CAediting_652956	chr8_99303128_+	SINE	Alu	AluSc8
CAediting_652957	chr8_99303129_+	SINE	Alu	AluSc8
CAediting_652958	chr8_99303130_+	SINE	Alu	AluSc8
CAediting_652959	chr8_99303159_+	SINE	Alu	AluSc8
CAediting_652960	chr8_99303160_+	SINE	Alu	AluSc8
CAediting_652961	chr8_99303165_+	SINE	Alu	AluSc8
CAediting_652962	chr8_99303176_+	SINE	Alu	AluSc8
CAediting_652963	chr8_99303186_+	SINE	Alu	AluSc8
CAediting_652964	chr8_99303200_+	SINE	Alu	AluSc8
CAediting_652965	chr8_99303201_+	SINE	Alu	AluSc8
CAediting_652966	chr8_99303608_+	SINE	Alu	AluSx3
CAediting_652967	chr8_99303618_+	SINE	Alu	AluSx3
CAediting_652968	chr8_99303623_+	SINE	Alu	AluSx3
CAediting_652969	chr8_99303630_+	SINE	Alu	AluSx3
CAediting_652970	chr8_99303641_+	SINE	Alu	AluSx3
CAediting_652971	chr8_99303649_+	SINE	Alu	AluSx3
CAediting_652972	chr8_99303650_+	SINE	Alu	AluSx3
CAediting_652973	chr8_99303670_+	SINE	Alu	AluSx3
CAediting_652974	chr8_99303674_+	SINE	Alu	AluSx3
CAediting_652975	chr8_99303681_+	SINE	Alu	AluSx3
CAediting_652976	chr8_99353167_+	SINE	Alu	AluSz6
CAediting_652977	chr8_99353274_+	SINE	Alu	AluSz6
CAediting_652978	chr8_99387406_+	SINE	Alu	AluJb
CAediting_652979	chr8_99387420_+	SINE	Alu	AluJb
CAediting_652980	chr8_99387425_+	SINE	Alu	AluJb
CAediting_652981	chr8_99387451_+	SINE	Alu	AluJb
CAediting_652982	chr8_99387475_+	SINE	Alu	AluJb
CAediting_652983	chr8_99388939_+	SINE	Alu	AluSg4
CAediting_652984	chr8_99401745_+	SINE	Alu	AluSx
CAediting_652985	chr8_99403438_+	SINE	Alu	AluSx
CAediting_652986	chr8_99403442_+	SINE	Alu	AluSx
CAediting_652987	chr8_99403446_+	SINE	Alu	AluSx
CAediting_652988	chr8_99403461_+	SINE	Alu	AluSx
CAediting_652989	chr8_99437463_+	SINE	Alu	AluSz
CAediting_652998	chr8_99444744_+	SINE	Alu	AluJb
CAediting_652999	chr8_99445727_+	LINE	L1	L1MB8
CAediting_653000	chr8_99449840_+	SINE	Alu	AluSc
CAediting_653001	chr8_99449904_+	SINE	Alu	AluSc
CAediting_653002	chr8_99449908_+	SINE	Alu	AluSc
CAediting_653003	chr8_99449939_+	SINE	Alu	AluSc
CAediting_653004	chr8_99449966_+	SINE	Alu	AluSc
CAediting_653005	chr8_99449971_+	SINE	Alu	AluSc
CAediting_653006	chr8_99449979_+	SINE	Alu	AluSc
CAediting_653007	chr8_99449985_+	SINE	Alu	AluSc
CAediting_653008	chr8_99449992_+	SINE	Alu	AluSc
CAediting_653009	chr8_99450014_+	SINE	Alu	AluSc
CAediting_653010	chr8_99450046_+	SINE	Alu	AluSc
CAediting_653011	chr8_99450490_+	SINE	Alu	AluSc
CAediting_653012	chr8_99450497_+	SINE	Alu	AluSc
CAediting_653013	chr8_99450566_+	SINE	Alu	AluSc
CAediting_653014	chr8_99454240_+	SINE	Alu	AluJo
CAediting_653015	chr8_99493523_+	SINE	Alu	AluSx
CAediting_653016	chr8_99493634_+	SINE	Alu	AluSx
CAediting_653017	chr8_99493697_+	SINE	Alu	AluSx
CAediting_653018	chr8_99502034_+	SINE	Alu	AluSp
CAediting_653019	chr8_99502102_+	SINE	Alu	AluSp
CAediting_653020	chr8_99539490_+	SINE	Alu	AluJr
CAediting_653021	chr8_99539512_+	SINE	Alu	AluJr
CAediting_653022	chr8_99539617_+	SINE	Alu	AluJr
CAediting_653023	chr8_99541469_+	LINE	L1	L1PA8
CAediting_653024	chr8_99562533_+	SINE	Alu	AluSx1
CAediting_653025	chr8_99562941_+	SINE	Alu	AluJo
CAediting_653026	chr8_99562954_+	SINE	Alu	AluJo
CAediting_653027	chr8_99562964_+	SINE	Alu	AluJo
CAediting_653028	chr8_99563016_+	SINE	Alu	AluJo
CAediting_653029	chr8_99563082_+	SINE	Alu	AluJo
CAediting_653030	chr8_99563112_+	SINE	Alu	AluJo
CAediting_653031	chr8_99569306_+	SINE	Alu	AluJb
CAediting_653032	chr8_99569308_+	SINE	Alu	AluJb
CAediting_653033	chr8_99569349_+	SINE	Alu	AluJb
CAediting_653034	chr8_99569354_+	SINE	Alu	AluJb
CAediting_653035	chr8_99579754_+	SINE	Alu	AluSx
CAediting_653036	chr8_99579950_+	SINE	Alu	AluSx
CAediting_653037	chr8_99580663_+	SINE	Alu	AluJr
CAediting_653038	chr8_99580668_+	SINE	Alu	AluJr
CAediting_653039	chr8_99580731_+	SINE	Alu	AluJr
CAediting_653040	chr8_99580767_+	SINE	Alu	AluJr
CAediting_653041	chr8_99580778_+	SINE	Alu	AluJr
CAediting_653042	chr8_99580786_+	SINE	Alu	AluJr
CAediting_653043	chr8_99580966_+	SINE	Alu	AluJb
CAediting_653044	chr8_99581089_+	SINE	Alu	AluJb
CAediting_653045	chr8_99581098_+	SINE	Alu	AluJb
CAediting_653046	chr8_99581132_+	SINE	Alu	AluJb
CAediting_653047	chr8_99581133_+	SINE	Alu	AluJb
CAediting_653048	chr8_99581138_+	SINE	Alu	AluJb
CAediting_653049	chr8_99581165_+	SINE	Alu	AluJb
CAediting_653050	chr8_99586734_+	LINE	L1	L1PA11
CAediting_653051	chr8_99592616_+	LINE	L1	L1PA11
CAediting_653052	chr8_99592620_+	LINE	L1	L1PA11
CAediting_653053	chr8_99592622_+	LINE	L1	L1PA11
CAediting_653054	chr8_99592671_+	LINE	L1	L1PA11
CAediting_653055	chr8_99592676_+	LINE	L1	L1PA11
CAediting_653056	chr8_99592750_+	LINE	L1	L1PA11
CAediting_653057	chr8_99592809_+	LINE	L1	L1PA11
CAediting_653058	chr8_99592906_+	LINE	L1	L1PA11
CAediting_653059	chr8_99592982_+	LINE	L1	L1PA11
CAediting_653060	chr8_99593007_+	LINE	L1	L1PA11
CAediting_653061	chr8_99593008_+	LINE	L1	L1PA11
CAediting_653062	chr8_99593051_+	LINE	L1	L1PA11
CAediting_653063	chr8_99593079_+	LINE	L1	L1PA11
CAediting_653064	chr8_99593740_+	LINE	L1	L1PA11
CAediting_653065	chr8_99606483_+	SINE	Alu	AluYm1
CAediting_653066	chr8_99606511_+	SINE	Alu	AluYm1
CAediting_653068	chr8_99614884_+	SINE	Alu	AluSp
CAediting_653069	chr8_99614974_+	SINE	Alu	AluSp
CAediting_653070	chr8_99615032_+	SINE	Alu	AluSp
CAediting_653071	chr8_99620856_+	SINE	Alu	AluSq
CAediting_653072	chr8_99620879_+	SINE	Alu	AluSq
CAediting_653073	chr8_99620888_+	SINE	Alu	AluSq
CAediting_653074	chr8_99620895_+	SINE	Alu	AluSq
CAediting_653075	chr8_99620897_+	SINE	Alu	AluSq
CAediting_653076	chr8_99620907_+	SINE	Alu	AluSq
CAediting_653077	chr8_99625511_+	SINE	Alu	AluJo
CAediting_653078	chr8_99625787_+	SINE	Alu	AluJb
CAediting_653079	chr8_99639756_+	SINE	Alu	AluJr
CAediting_653080	chr8_99639761_+	SINE	Alu	AluJr
CAediting_653081	chr8_99639764_+	SINE	Alu	AluJr
CAediting_653082	chr8_99639775_+	SINE	Alu	AluJr
CAediting_653083	chr8_99639785_+	SINE	Alu	AluJr
CAediting_653084	chr8_99639806_+	SINE	Alu	AluJr
CAediting_653085	chr8_99639813_+	SINE	Alu	AluJr
CAediting_653086	chr8_99639818_+	SINE	Alu	AluJr
CAediting_653087	chr8_99639819_+	SINE	Alu	AluJr
CAediting_653088	chr8_99639821_+	SINE	Alu	AluJr
CAediting_653089	chr8_99639823_+	SINE	Alu	AluJr
CAediting_653090	chr8_99639850_+	SINE	Alu	AluJr
CAediting_653091	chr8_99639851_+	SINE	Alu	AluJr
CAediting_653092	chr8_99639874_+	SINE	Alu	AluJr
CAediting_653093	chr8_99639934_+	SINE	Alu	AluJr
CAediting_653094	chr8_99640338_+	SINE	Alu	AluJb
CAediting_653095	chr8_99640384_+	SINE	Alu	AluJb
CAediting_653096	chr8_99640406_+	SINE	Alu	AluJb
CAediting_653097	chr8_99640432_+	SINE	Alu	AluJb
CAediting_653098	chr8_99640458_+	SINE	Alu	AluJb
CAediting_653099	chr8_99640468_+	SINE	Alu	AluJb
CAediting_653100	chr8_99640506_+	SINE	Alu	AluJb
CAediting_653101	chr8_99662486_+	SINE	Alu	AluJo
CAediting_653102	chr8_99662576_+	SINE	Alu	AluJo
CAediting_653103	chr8_99662586_+	SINE	Alu	AluJo
CAediting_653104	chr8_99662937_+	SINE	Alu	AluSz6
CAediting_653111	chr8_99746500_+	SINE	MIR	MIRb
CAediting_653112	chr8_99746507_+	SINE	MIR	MIRb
CAediting_653113	chr8_99746508_+	SINE	MIR	MIRb
CAediting_653114	chr8_99746534_+	SINE	MIR	MIRb
CAediting_653115	chr8_99746535_+	SINE	MIR	MIRb
CAediting_653116	chr8_99746542_+	SINE	MIR	MIRb
CAediting_653117	chr8_99746571_+	SINE	MIR	MIRb
CAediting_653118	chr8_99748842_+	SINE	MIR	MIRb
CAediting_653119	chr8_99748873_+	SINE	MIR	MIRb
CAediting_653120	chr8_99748874_+	SINE	MIR	MIRb
CAediting_653121	chr8_99748880_+	SINE	MIR	MIRb
CAediting_653123	chr8_99762874_+	SINE	Alu	AluJo
CAediting_653124	chr8_99762876_+	SINE	Alu	AluJo
CAediting_653125	chr8_99762991_+	SINE	Alu	AluJo
CAediting_653126	chr8_99762995_+	SINE	Alu	AluJo
CAediting_653127	chr8_99762999_+	SINE	Alu	AluJo
CAediting_653128	chr8_99763038_+	SINE	Alu	AluJo
CAediting_653129	chr8_99763039_+	SINE	Alu	AluJo
CAediting_653130	chr8_99763066_+	SINE	Alu	AluJo
CAediting_653131	chr8_99763069_+	SINE	Alu	AluJo
CAediting_653132	chr8_99763070_+	SINE	Alu	AluJo
CAediting_653133	chr8_99763088_+	SINE	Alu	AluJo
CAediting_653134	chr8_99763091_+	SINE	Alu	AluJo
CAediting_653135	chr8_99763093_+	SINE	Alu	AluJo
CAediting_653136	chr8_99763096_+	SINE	Alu	AluJo
CAediting_653137	chr8_99816534_+	SINE	Alu	AluJb
CAediting_653138	chr8_99816537_+	SINE	Alu	AluJb
CAediting_653139	chr8_99816542_+	SINE	Alu	AluJb
CAediting_653140	chr8_99816550_+	SINE	Alu	AluJb
CAediting_653141	chr8_99816615_+	SINE	Alu	AluJb
CAediting_653142	chr8_99842351_+	SINE	Alu	AluJr
CAediting_653143	chr8_99842352_+	SINE	Alu	AluJr
CAediting_653144	chr8_99842508_+	SINE	Alu	AluJr
CAediting_653145	chr8_99842516_+	SINE	Alu	AluJr
CAediting_653146	chr8_99842517_+	SINE	Alu	AluJr
CAediting_653147	chr8_99842924_+	SINE	Alu	AluJb
CAediting_653148	chr8_99842928_+	SINE	Alu	AluJb
CAediting_653149	chr8_99844638_+	SINE	Alu	AluSq

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RNA A-to-I editing events in the alternative splicing sites for VPS13B

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000132549.17.VPS13B.

Correlation between RNA A-to-I editing and PSI for ENSG00000132549.17.VPS13B.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for VPS13B

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for VPS13B

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for VPS13B

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_524911	chr7_5495852_-	ENSG00000132549.17	ENST00000496144	hsa-miR-589-3p	99507890	99507896	7mer-m8	99507874	99507897	156	-19.24
CAediting_1351755	chr19_40282625_-	ENSG00000132549.17	ENST00000357162	hsa-miR-641	99877256	99877262	7mer-m8	99877240	99877263	156	-17.03
CAediting_228905	chr2_188297554_+	ENSG00000132549.17	ENST00000357162	hsa-miR-561-3p	99877173	99877178	6mer	99877158	99877179	142	-16.07
CAediting_1351755	chr19_40282625_-	ENSG00000132549.17	ENST00000358544	hsa-miR-641	99877256	99877262	7mer-m8	99877240	99877263	156	-17.03
CAediting_228905	chr2_188297554_+	ENSG00000132549.17	ENST00000358544	hsa-miR-561-3p	99877173	99877178	6mer	99877158	99877179	142	-16.07

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_604450	chr7_133034877_-	ENSG00000132549.17	ENST00000357162	hsa-miR-3654	99876741	99876748	8mer-1a	99876732	99876748	141	-15.25
CAediting_396018	chr5_1062918_-	ENSG00000132549.17	ENST00000357162	hsa-miR-4635	99876160	99876166	7mer-m8	99876147	99876167	153	-12.88
CAediting_1229413	chr17_67471544_+	ENSG00000132549.17	ENST00000357162	hsa-miR-548aa	99876851	99876858	8mer-1a	99876829	99876858	153	-10.47
CAediting_1229415	chr17_67471547_+	ENSG00000132549.17	ENST00000357162	hsa-miR-548aa	99876851	99876858	8mer-1a	99876829	99876858	153	-10.47
CAediting_228905	chr2_188297554_+	ENSG00000132549.17	ENST00000357162	hsa-miR-561-3p	99876435	99876441	7mer-m8	99876423	99876442	141	-7.75
CAediting_1351755	chr19_40282625_-	ENSG00000132549.17	ENST00000357162	hsa-miR-641	99876707	99876714	8mer-1a	99876691	99876714	141	-14.63
CAediting_604450	chr7_133034877_-	ENSG00000132549.17	ENST00000358544	hsa-miR-3654	99876741	99876748	8mer-1a	99876732	99876748	141	-15.25
CAediting_396018	chr5_1062918_-	ENSG00000132549.17	ENST00000358544	hsa-miR-4635	99876160	99876166	7mer-m8	99876147	99876167	153	-12.88
CAediting_1229413	chr17_67471544_+	ENSG00000132549.17	ENST00000358544	hsa-miR-548aa	99876851	99876858	8mer-1a	99876829	99876858	153	-10.47
CAediting_1229415	chr17_67471547_+	ENSG00000132549.17	ENST00000358544	hsa-miR-548aa	99876851	99876858	8mer-1a	99876829	99876858	153	-10.47
CAediting_228905	chr2_188297554_+	ENSG00000132549.17	ENST00000358544	hsa-miR-561-3p	99876435	99876441	7mer-m8	99876423	99876442	141	-7.75
CAediting_1351755	chr19_40282625_-	ENSG00000132549.17	ENST00000358544	hsa-miR-641	99876707	99876714	8mer-1a	99876691	99876714	141	-14.63

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for VPS13B

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000355155.4	protein_coding

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_652894	ENST00000355155.4	chr8_99209659_+	-749.90	-750.60	-749.90

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Relation with ADAR for VPS13B

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

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Relation with cancer stages for VPS13B

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for VPS13B

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for VPS13B

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for VPS13B

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
VPS13B	C0265223	Cohen syndrome	10	CTD_human;GENOMICS_ENGLAND;ORPHANET;UNIPROT
VPS13B	C1854061	Cutis Verticis Gyrata, Retinitis Pigmentosa, and Sensorineural Deafness	8	CLINGEN

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene