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Editing gene: SRFBP1 (CAeditome ID:153443)

Gene summary for SRFBP1

Gene summary

Gene information	Gene symbol	SRFBP1
	Gene ID	153443
	Gene name	serum response factor binding protein 1
	Synonyms	BUD22\|P49\|Rlb1\|STRAP\|p49/STRAP
	Cytomap	5q23.1
	Type of gene	protein-coding
	Description	serum response factor-binding protein 1BUD22 homologSRF-dependent transcription regulation-associated protein
	Modification date	20210518
	UniProtAcc	Q8NEF9
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for SRFBP1

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000151304.5

RNA A-to-I editing events in Cancer.

CAediting_423947(122003265, +), CAediting_423948(122027168, +), CAediting_423949(122027179, +), CAediting_423950(122027180, +), CAediting_423951(122027182, +), CAediting_423952(122027206, +), CAediting_423953(122027209, +), CAediting_423954(122027214, +), CAediting_423955(122027219, +), CAediting_423956(122027230, +), CAediting_423957(122027235, +), CAediting_423958(122027240, +), CAediting_423959(122027260, +), CAediting_423960(122027261, +), CAediting_423961(122027265, +), CAediting_423962(122027273, +), CAediting_423963(122027324, +), CAediting_423964(122028350, +), CAediting_423965(122028351, +), CAediting_423966(122028356, +), CAediting_423967(122028359, +), CAediting_423968(122028367, +), CAediting_423969(122028373, +), CAediting_423970(122028381, +), CAediting_423971(122028389, +), CAediting_423972(122028396, +), CAediting_423973(122028404, +), CAediting_423974(122028406, +), CAediting_423975(122028407, +), CAediting_423976(122028422, +), CAediting_423977(122028428, +), CAediting_423978(122028430, +), CAediting_423979(122028441, +), CAediting_423980(122028444, +), CAediting_423981(122028445, +), CAediting_423982(122028446, +), CAediting_423983(122028447, +), CAediting_423984(122028448, +), CAediting_423985(122028450, +), CAediting_423986(122028457, +), CAediting_423987(122028460, +), CAediting_423988(122028464, +), CAediting_423989(122028486, +), CAediting_423990(122028487, +), CAediting_423991(122028500, +), CAediting_423992(122028509, +), CAediting_423993(122028519, +), CAediting_423994(122028527, +), CAediting_423995(122028528, +), CAediting_423996(122028548, +), CAediting_423997(122028552, +), CAediting_423998(122028556, +), CAediting_423999(122028557, +), CAediting_424000(122028559, +), CAediting_424001(122028564, +), CAediting_424002(122028577, +), CAediting_424003(122028589, +), CAediting_424004(122028610, +), CAediting_424005(122030685, +), CAediting_424006(122030686, +), CAediting_424007(122030687, +), CAediting_424008(122030688, +), CAediting_424009(122030690, +), CAediting_424010(122030700, +), CAediting_424011(122030712, +), CAediting_424012(122030715, +), CAediting_424013(122030723, +), CAediting_424014(122031394, +), CAediting_424015(122031395, +), CAediting_424016(122031396, +), CAediting_424017(122031397, +), CAediting_424018(122031398, +), CAediting_424019(122031404, +), CAediting_424020(122031406, +), CAediting_424021(122031407, +), CAediting_424022(122031416, +), CAediting_424023(122031419, +), CAediting_424024(122031420, +), CAediting_424025(122031425, +), CAediting_424026(122031432, +), CAediting_424027(122031438, +), CAediting_424028(122031442, +), CAediting_424029(122031443, +), CAediting_424030(122031444, +), CAediting_424031(122031445, +), CAediting_424032(122031446, +), CAediting_424033(122031447, +), CAediting_424034(122031451, +), CAediting_424035(122033535, +), CAediting_424036(122033642, +), CAediting_424037(122036290, +), CAediting_424038(122036998, +), CAediting_424039(122036999, +), CAediting_424040(122037017, +), CAediting_424041(122037038, +), CAediting_424042(122037081, +), CAediting_424043(122037083, +), CAediting_424044(122037084, +), CAediting_424045(122037132, +), CAediting_424046(122037158, +), CAediting_424047(122037159, +), CAediting_424048(122037160, +), CAediting_424049(122037573, +), CAediting_424050(122037616, +), CAediting_424051(122037624, +), CAediting_424052(122037625, +), CAediting_424053(122037630, +), CAediting_424054(122037693, +), CAediting_424055(122037738, +), CAediting_424056(122037752, +), CAediting_424057(122037765, +), CAediting_424058(122049166, +), CAediting_424059(122049167, +), CAediting_424060(122049206, +), CAediting_424061(122049311, +), CAediting_424062(122049372, +), CAediting_424063(122049378, +), CAediting_424064(122049385, +), CAediting_424065(122049421, +), CAediting_424066(122050868, +), CAediting_424067(122050888, +), CAediting_424068(122050891, +), CAediting_424069(122050910, +), CAediting_424070(122050965, +), CAediting_424071(122050973, +), CAediting_424072(122050976, +), CAediting_424073(122051287, +), CAediting_424074(122051329, +), CAediting_424075(122051360, +), CAediting_424076(122051458, +), CAediting_424077(122051463, +), CAediting_424078(122051467, +), CAediting_424079(122051485, +), CAediting_424080(122051486, +), CAediting_424081(122051500, +),

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RNA editing positional annotations for SRFBP1 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_423947	chr5_122003265_+	intronic
CAediting_423948	chr5_122027168_+	ncRNA_intronic
CAediting_423949	chr5_122027179_+	ncRNA_intronic
CAediting_423950	chr5_122027180_+	ncRNA_intronic
CAediting_423951	chr5_122027182_+	ncRNA_intronic
CAediting_423952	chr5_122027206_+	ncRNA_intronic
CAediting_423953	chr5_122027209_+	ncRNA_intronic
CAediting_423954	chr5_122027214_+	ncRNA_intronic
CAediting_423955	chr5_122027219_+	ncRNA_intronic
CAediting_423956	chr5_122027230_+	ncRNA_intronic
CAediting_423957	chr5_122027235_+	ncRNA_intronic
CAediting_423958	chr5_122027240_+	ncRNA_intronic
CAediting_423959	chr5_122027260_+	ncRNA_intronic
CAediting_423960	chr5_122027261_+	ncRNA_intronic
CAediting_423961	chr5_122027265_+	ncRNA_intronic
CAediting_423962	chr5_122027273_+	ncRNA_intronic
CAediting_423963	chr5_122027324_+	ncRNA_intronic
CAediting_423964	chr5_122028350_+	ncRNA_intronic
CAediting_423965	chr5_122028351_+	ncRNA_intronic
CAediting_423966	chr5_122028356_+	ncRNA_intronic
CAediting_423967	chr5_122028359_+	ncRNA_intronic
CAediting_423968	chr5_122028367_+	ncRNA_intronic
CAediting_423969	chr5_122028373_+	ncRNA_intronic
CAediting_423970	chr5_122028381_+	ncRNA_intronic
CAediting_423971	chr5_122028389_+	ncRNA_intronic
CAediting_423972	chr5_122028396_+	ncRNA_intronic
CAediting_423973	chr5_122028404_+	ncRNA_intronic
CAediting_423974	chr5_122028406_+	ncRNA_intronic
CAediting_423975	chr5_122028407_+	ncRNA_intronic
CAediting_423976	chr5_122028422_+	ncRNA_intronic
CAediting_423977	chr5_122028428_+	ncRNA_intronic
CAediting_423978	chr5_122028430_+	ncRNA_intronic
CAediting_423979	chr5_122028441_+	ncRNA_intronic
CAediting_423980	chr5_122028444_+	ncRNA_intronic
CAediting_423981	chr5_122028445_+	ncRNA_intronic
CAediting_423982	chr5_122028446_+	ncRNA_intronic
CAediting_423983	chr5_122028447_+	ncRNA_intronic
CAediting_423984	chr5_122028448_+	ncRNA_intronic
CAediting_423985	chr5_122028450_+	ncRNA_intronic
CAediting_423986	chr5_122028457_+	ncRNA_intronic
CAediting_423987	chr5_122028460_+	ncRNA_intronic
CAediting_423988	chr5_122028464_+	ncRNA_intronic
CAediting_423989	chr5_122028486_+	ncRNA_intronic
CAediting_423990	chr5_122028487_+	ncRNA_intronic
CAediting_423991	chr5_122028500_+	ncRNA_intronic
CAediting_423992	chr5_122028509_+	ncRNA_intronic
CAediting_423993	chr5_122028519_+	ncRNA_intronic
CAediting_423994	chr5_122028527_+	ncRNA_intronic
CAediting_423995	chr5_122028528_+	ncRNA_intronic
CAediting_423996	chr5_122028548_+	ncRNA_intronic
CAediting_423997	chr5_122028552_+	ncRNA_intronic
CAediting_423998	chr5_122028556_+	ncRNA_intronic
CAediting_423999	chr5_122028557_+	ncRNA_intronic
CAediting_424000	chr5_122028559_+	ncRNA_intronic
CAediting_424001	chr5_122028564_+	ncRNA_intronic
CAediting_424002	chr5_122028577_+	ncRNA_intronic
CAediting_424003	chr5_122028589_+	ncRNA_intronic
CAediting_424004	chr5_122028610_+	ncRNA_intronic
CAediting_424005	chr5_122030685_+	ncRNA_intronic
CAediting_424006	chr5_122030686_+	ncRNA_intronic
CAediting_424007	chr5_122030687_+	ncRNA_intronic
CAediting_424008	chr5_122030688_+	ncRNA_intronic
CAediting_424009	chr5_122030690_+	ncRNA_intronic
CAediting_424010	chr5_122030700_+	ncRNA_intronic
CAediting_424011	chr5_122030712_+	ncRNA_intronic
CAediting_424012	chr5_122030715_+	ncRNA_intronic
CAediting_424013	chr5_122030723_+	ncRNA_intronic
CAediting_424014	chr5_122031394_+	ncRNA_intronic
CAediting_424015	chr5_122031395_+	ncRNA_intronic
CAediting_424016	chr5_122031396_+	ncRNA_intronic
CAediting_424017	chr5_122031397_+	ncRNA_intronic
CAediting_424018	chr5_122031398_+	ncRNA_intronic
CAediting_424019	chr5_122031404_+	ncRNA_intronic
CAediting_424020	chr5_122031406_+	ncRNA_intronic
CAediting_424021	chr5_122031407_+	ncRNA_intronic
CAediting_424022	chr5_122031416_+	ncRNA_intronic
CAediting_424023	chr5_122031419_+	ncRNA_intronic
CAediting_424024	chr5_122031420_+	ncRNA_intronic
CAediting_424025	chr5_122031425_+	ncRNA_intronic
CAediting_424026	chr5_122031432_+	ncRNA_intronic
CAediting_424027	chr5_122031438_+	ncRNA_intronic
CAediting_424028	chr5_122031442_+	ncRNA_intronic
CAediting_424029	chr5_122031443_+	ncRNA_intronic
CAediting_424030	chr5_122031444_+	ncRNA_intronic
CAediting_424031	chr5_122031445_+	ncRNA_intronic
CAediting_424032	chr5_122031446_+	ncRNA_intronic
CAediting_424033	chr5_122031447_+	ncRNA_intronic
CAediting_424034	chr5_122031451_+	ncRNA_intronic
CAediting_424035	chr5_122033535_+	ncRNA_intronic
CAediting_424036	chr5_122033642_+	ncRNA_intronic
CAediting_424037	chr5_122036290_+	ncRNA_intronic
CAediting_424038	chr5_122036998_+	ncRNA_intronic
CAediting_424039	chr5_122036999_+	ncRNA_intronic
CAediting_424040	chr5_122037017_+	ncRNA_intronic
CAediting_424041	chr5_122037038_+	ncRNA_intronic
CAediting_424042	chr5_122037081_+	ncRNA_intronic
CAediting_424043	chr5_122037083_+	ncRNA_intronic
CAediting_424044	chr5_122037084_+	ncRNA_intronic
CAediting_424045	chr5_122037132_+	ncRNA_intronic
CAediting_424046	chr5_122037158_+	ncRNA_intronic
CAediting_424047	chr5_122037159_+	ncRNA_intronic
CAediting_424048	chr5_122037160_+	ncRNA_intronic
CAediting_424049	chr5_122037573_+	ncRNA_intronic
CAediting_424050	chr5_122037616_+	ncRNA_intronic
CAediting_424051	chr5_122037624_+	ncRNA_intronic
CAediting_424052	chr5_122037625_+	ncRNA_intronic
CAediting_424053	chr5_122037630_+	ncRNA_intronic
CAediting_424054	chr5_122037693_+	ncRNA_intronic
CAediting_424055	chr5_122037738_+	ncRNA_intronic
CAediting_424056	chr5_122037752_+	ncRNA_intronic
CAediting_424057	chr5_122037765_+	ncRNA_intronic
CAediting_424058	chr5_122049166_+	ncRNA_intronic
CAediting_424059	chr5_122049167_+	ncRNA_intronic
CAediting_424060	chr5_122049206_+	ncRNA_intronic
CAediting_424061	chr5_122049311_+	ncRNA_intronic
CAediting_424062	chr5_122049372_+	ncRNA_intronic
CAediting_424063	chr5_122049378_+	ncRNA_intronic
CAediting_424064	chr5_122049385_+	ncRNA_intronic
CAediting_424065	chr5_122049421_+	ncRNA_intronic
CAediting_424066	chr5_122050868_+	ncRNA_intronic
CAediting_424067	chr5_122050888_+	ncRNA_intronic
CAediting_424068	chr5_122050891_+	ncRNA_intronic
CAediting_424069	chr5_122050910_+	ncRNA_intronic
CAediting_424070	chr5_122050965_+	ncRNA_intronic
CAediting_424071	chr5_122050973_+	ncRNA_intronic
CAediting_424072	chr5_122050976_+	ncRNA_intronic
CAediting_424073	chr5_122051287_+	ncRNA_intronic
CAediting_424074	chr5_122051329_+	ncRNA_intronic
CAediting_424075	chr5_122051360_+	ncRNA_intronic
CAediting_424076	chr5_122051458_+	ncRNA_intronic
CAediting_424077	chr5_122051463_+	ncRNA_intronic
CAediting_424078	chr5_122051467_+	ncRNA_intronic
CAediting_424079	chr5_122051485_+	ncRNA_intronic
CAediting_424080	chr5_122051486_+	ncRNA_intronic
CAediting_424081	chr5_122051500_+	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_423947	chr5_122003265_+	SINE	Alu	AluJb
CAediting_423949	chr5_122027179_+	SINE	Alu	AluJr
CAediting_423950	chr5_122027180_+	SINE	Alu	AluJr
CAediting_423951	chr5_122027182_+	SINE	Alu	AluJr
CAediting_423952	chr5_122027206_+	SINE	Alu	AluJr
CAediting_423953	chr5_122027209_+	SINE	Alu	AluJr
CAediting_423954	chr5_122027214_+	SINE	Alu	AluJr
CAediting_423955	chr5_122027219_+	SINE	Alu	AluJr
CAediting_423956	chr5_122027230_+	SINE	Alu	AluJr
CAediting_423957	chr5_122027235_+	SINE	Alu	AluJr
CAediting_423958	chr5_122027240_+	SINE	Alu	AluJr
CAediting_423959	chr5_122027260_+	SINE	Alu	AluJr
CAediting_423960	chr5_122027261_+	SINE	Alu	AluJr
CAediting_423961	chr5_122027265_+	SINE	Alu	AluJr
CAediting_423962	chr5_122027273_+	SINE	Alu	AluJr
CAediting_423963	chr5_122027324_+	SINE	Alu	AluJr
CAediting_423964	chr5_122028350_+	SINE	Alu	AluSx1
CAediting_423965	chr5_122028351_+	SINE	Alu	AluSx1
CAediting_423966	chr5_122028356_+	SINE	Alu	AluSx1
CAediting_423967	chr5_122028359_+	SINE	Alu	AluSx1
CAediting_423968	chr5_122028367_+	SINE	Alu	AluSx1
CAediting_423969	chr5_122028373_+	SINE	Alu	AluSx1
CAediting_423970	chr5_122028381_+	SINE	Alu	AluSx1
CAediting_423971	chr5_122028389_+	SINE	Alu	AluSx1
CAediting_423972	chr5_122028396_+	SINE	Alu	AluSx1
CAediting_423973	chr5_122028404_+	SINE	Alu	AluSx1
CAediting_423974	chr5_122028406_+	SINE	Alu	AluSx1
CAediting_423975	chr5_122028407_+	SINE	Alu	AluSx1
CAediting_423976	chr5_122028422_+	SINE	Alu	AluSx1
CAediting_423977	chr5_122028428_+	SINE	Alu	AluSx1
CAediting_423978	chr5_122028430_+	SINE	Alu	AluSx1
CAediting_423979	chr5_122028441_+	SINE	Alu	AluSx1
CAediting_423980	chr5_122028444_+	SINE	Alu	AluSx1
CAediting_423981	chr5_122028445_+	SINE	Alu	AluSx1
CAediting_423982	chr5_122028446_+	SINE	Alu	AluSx1
CAediting_423983	chr5_122028447_+	SINE	Alu	AluSx1
CAediting_423984	chr5_122028448_+	SINE	Alu	AluSx1
CAediting_423985	chr5_122028450_+	SINE	Alu	AluSx1
CAediting_423986	chr5_122028457_+	SINE	Alu	AluSx1
CAediting_423987	chr5_122028460_+	SINE	Alu	AluSx1
CAediting_423988	chr5_122028464_+	SINE	Alu	AluSx1
CAediting_423989	chr5_122028486_+	SINE	Alu	AluSx1
CAediting_423990	chr5_122028487_+	SINE	Alu	AluSx1
CAediting_423991	chr5_122028500_+	SINE	Alu	AluSx1
CAediting_423992	chr5_122028509_+	SINE	Alu	AluSx1
CAediting_423993	chr5_122028519_+	SINE	Alu	AluSx1
CAediting_423994	chr5_122028527_+	SINE	Alu	AluSx1
CAediting_423995	chr5_122028528_+	SINE	Alu	AluSx1
CAediting_423996	chr5_122028548_+	SINE	Alu	AluSx1
CAediting_423997	chr5_122028552_+	SINE	Alu	AluSx1
CAediting_423998	chr5_122028556_+	SINE	Alu	AluSx1
CAediting_423999	chr5_122028557_+	SINE	Alu	AluSx1
CAediting_424000	chr5_122028559_+	SINE	Alu	AluSx1
CAediting_424001	chr5_122028564_+	SINE	Alu	AluSx1
CAediting_424002	chr5_122028577_+	SINE	Alu	AluSx1
CAediting_424003	chr5_122028589_+	SINE	Alu	AluSx1
CAediting_424004	chr5_122028610_+	SINE	Alu	AluSx1
CAediting_424005	chr5_122030685_+	LINE	L1	L1M4
CAediting_424006	chr5_122030686_+	LINE	L1	L1M4
CAediting_424007	chr5_122030687_+	LINE	L1	L1M4
CAediting_424008	chr5_122030688_+	LINE	L1	L1M4
CAediting_424009	chr5_122030690_+	LINE	L1	L1M4
CAediting_424010	chr5_122030700_+	LINE	L1	L1M4
CAediting_424011	chr5_122030712_+	LINE	L1	L1M4
CAediting_424012	chr5_122030715_+	LINE	L1	L1M4
CAediting_424013	chr5_122030723_+	LINE	L1	L1M4
CAediting_424014	chr5_122031394_+	LINE	L1	L1MB7
CAediting_424015	chr5_122031395_+	LINE	L1	L1MB7
CAediting_424016	chr5_122031396_+	LINE	L1	L1MB7
CAediting_424017	chr5_122031397_+	LINE	L1	L1MB7
CAediting_424018	chr5_122031398_+	LINE	L1	L1MB7
CAediting_424019	chr5_122031404_+	LINE	L1	L1MB7
CAediting_424020	chr5_122031406_+	LINE	L1	L1MB7
CAediting_424021	chr5_122031407_+	LINE	L1	L1MB7
CAediting_424022	chr5_122031416_+	LINE	L1	L1MB7
CAediting_424023	chr5_122031419_+	LINE	L1	L1MB7
CAediting_424024	chr5_122031420_+	LINE	L1	L1MB7
CAediting_424025	chr5_122031425_+	LINE	L1	L1MB7
CAediting_424026	chr5_122031432_+	LINE	L1	L1MB7
CAediting_424027	chr5_122031438_+	LINE	L1	L1MB7
CAediting_424028	chr5_122031442_+	LINE	L1	L1MB7
CAediting_424029	chr5_122031443_+	LINE	L1	L1MB7
CAediting_424030	chr5_122031444_+	LINE	L1	L1MB7
CAediting_424031	chr5_122031445_+	LINE	L1	L1MB7
CAediting_424032	chr5_122031446_+	LINE	L1	L1MB7
CAediting_424033	chr5_122031447_+	LINE	L1	L1MB7
CAediting_424034	chr5_122031451_+	LINE	L1	L1MB7
CAediting_424035	chr5_122033535_+	SINE	Alu	AluSx1
CAediting_424036	chr5_122033642_+	SINE	Alu	AluSx1
CAediting_424037	chr5_122036290_+	LTR	ERVL	MER77
CAediting_424038	chr5_122036998_+	SINE	Alu	AluSp
CAediting_424039	chr5_122036999_+	SINE	Alu	AluSp
CAediting_424040	chr5_122037017_+	SINE	Alu	AluSp
CAediting_424041	chr5_122037038_+	SINE	Alu	AluSp
CAediting_424042	chr5_122037081_+	SINE	Alu	AluSp
CAediting_424043	chr5_122037083_+	SINE	Alu	AluSp
CAediting_424044	chr5_122037084_+	SINE	Alu	AluSp
CAediting_424045	chr5_122037132_+	SINE	Alu	AluSp
CAediting_424046	chr5_122037158_+	SINE	Alu	AluSp
CAediting_424047	chr5_122037159_+	SINE	Alu	AluSp
CAediting_424048	chr5_122037160_+	SINE	Alu	AluSp
CAediting_424049	chr5_122037573_+	SINE	Alu	AluJo
CAediting_424050	chr5_122037616_+	SINE	Alu	AluJo
CAediting_424051	chr5_122037624_+	SINE	Alu	AluJo
CAediting_424052	chr5_122037625_+	SINE	Alu	AluJo
CAediting_424053	chr5_122037630_+	SINE	Alu	AluJo
CAediting_424054	chr5_122037693_+	SINE	Alu	AluJo
CAediting_424055	chr5_122037738_+	SINE	Alu	AluJo
CAediting_424056	chr5_122037752_+	SINE	Alu	AluJo
CAediting_424057	chr5_122037765_+	SINE	Alu	AluJo
CAediting_424058	chr5_122049166_+	LINE	L1	L1PA4
CAediting_424059	chr5_122049167_+	LINE	L1	L1PA4
CAediting_424060	chr5_122049206_+	LINE	L1	L1PA4
CAediting_424061	chr5_122049311_+	LINE	L1	L1PA4
CAediting_424062	chr5_122049372_+	LINE	L1	L1PA4
CAediting_424063	chr5_122049378_+	LINE	L1	L1PA4
CAediting_424064	chr5_122049385_+	LINE	L1	L1PA4
CAediting_424065	chr5_122049421_+	LINE	L1	L1PA4
CAediting_424066	chr5_122050868_+	LINE	L1	L1PA15
CAediting_424067	chr5_122050888_+	LINE	L1	L1PA15
CAediting_424068	chr5_122050891_+	LINE	L1	L1PA15
CAediting_424069	chr5_122050910_+	LINE	L1	L1PA15
CAediting_424070	chr5_122050965_+	LINE	L1	L1PA15
CAediting_424071	chr5_122050973_+	LINE	L1	L1PA15
CAediting_424072	chr5_122050976_+	LINE	L1	L1PA15
CAediting_424073	chr5_122051287_+	LINE	L1	L1PA15
CAediting_424074	chr5_122051329_+	LINE	L1	L1PA15
CAediting_424075	chr5_122051360_+	LINE	L1	L1PA15
CAediting_424076	chr5_122051458_+	LINE	L1	L1PA15
CAediting_424077	chr5_122051463_+	LINE	L1	L1PA15
CAediting_424078	chr5_122051467_+	LINE	L1	L1PA15
CAediting_424079	chr5_122051485_+	LINE	L1	L1PA15
CAediting_424080	chr5_122051486_+	LINE	L1	L1PA15
CAediting_424081	chr5_122051500_+	LINE	L1	L1PA15

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RNA A-to-I editing events in the alternative splicing sites for SRFBP1

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000151304.5.SRFBP1.

Correlation between RNA A-to-I editing and PSI for ENSG00000151304.5.SRFBP1.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for SRFBP1

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

BRCA.CAediting_423949.ENSG00000151304.SRFBP1.png
Soverview

BRCA.CAediting_423950.ENSG00000151304.SRFBP1.png
Soverview

BRCA.CAediting_424019.ENSG00000151304.SRFBP1.png
Soverview

KIRP.CAediting_424019.ENSG00000151304.SRFBP1.png
Soverview

LIHC.CAediting_424017.ENSG00000151304.SRFBP1.png
Soverview

LUAD.CAediting_423949.ENSG00000151304.SRFBP1.png
Soverview

LUAD.CAediting_423950.ENSG00000151304.SRFBP1.png
Soverview

OV.CAediting_424019.ENSG00000151304.SRFBP1.png
Soverview

PRAD.CAediting_424019.ENSG00000151304.SRFBP1.png
Soverview

STAD.CAediting_424018.ENSG00000151304.SRFBP1.png
Soverview

TGCT.CAediting_424009.ENSG00000151304.SRFBP1.png
Soverview

TGCT.CAediting_424019.ENSG00000151304.SRFBP1.png
Soverview

THCA.CAediting_423950.ENSG00000151304.SRFBP1.png
Soverview

THCA.CAediting_424017.ENSG00000151304.SRFBP1.png
Soverview

THCA.CAediting_424018.ENSG00000151304.SRFBP1.png
Soverview

THCA.CAediting_424019.ENSG00000151304.SRFBP1.png
Soverview

THYM.CAediting_424019.ENSG00000151304.SRFBP1.png
Soverview

UCS.CAediting_423950.ENSG00000151304.SRFBP1.png
Soverview

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Protein coding region RNA A-to-I editings for SRFBP1

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for SRFBP1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for SRFBP1

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000339397.4	protein_coding

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_423948	ENST00000339397.4	chr5_122027168_+	-748.60	-748.50	-829.50
CAediting_423949	ENST00000339397.4	chr5_122027179_+	-754.90	-748.50	-829.50
CAediting_423950	ENST00000339397.4	chr5_122027180_+	-748.50	-748.50	-829.50
CAediting_423951	ENST00000339397.4	chr5_122027182_+	-747.90	-748.50	-829.50
CAediting_423952	ENST00000339397.4	chr5_122027206_+	-755.70	-748.50	-829.50
CAediting_423953	ENST00000339397.4	chr5_122027209_+	-755.10	-748.50	-829.50
CAediting_423954	ENST00000339397.4	chr5_122027214_+	-755.20	-748.50	-829.50
CAediting_423955	ENST00000339397.4	chr5_122027219_+	-751.20	-748.50	-829.50
CAediting_423956	ENST00000339397.4	chr5_122027230_+	-752.20	-748.50	-829.50
CAediting_423957	ENST00000339397.4	chr5_122027235_+	-748.10	-748.50	-829.50
CAediting_423958	ENST00000339397.4	chr5_122027240_+	-747.70	-748.50	-829.50
CAediting_423959	ENST00000339397.4	chr5_122027260_+	-748.60	-748.50	-829.50
CAediting_423960	ENST00000339397.4	chr5_122027261_+	-748.50	-748.50	-829.50
CAediting_423961	ENST00000339397.4	chr5_122027265_+	-747.90	-748.50	-829.50
CAediting_423962	ENST00000339397.4	chr5_122027273_+	-753.90	-748.50	-829.50
CAediting_423963	ENST00000339397.4	chr5_122027324_+	-754.70	-748.50	-829.50
CAediting_423964	ENST00000339397.4	chr5_122028350_+	-748.80	-748.50	-829.50
CAediting_423965	ENST00000339397.4	chr5_122028351_+	-754.50	-748.50	-829.50
CAediting_423966	ENST00000339397.4	chr5_122028356_+	-747.80	-748.50	-829.50
CAediting_423967	ENST00000339397.4	chr5_122028359_+	-751.20	-748.50	-829.50
CAediting_423968	ENST00000339397.4	chr5_122028367_+	-747.60	-748.50	-829.50
CAediting_423969	ENST00000339397.4	chr5_122028373_+	-747.60	-748.50	-829.50
CAediting_423970	ENST00000339397.4	chr5_122028381_+	-751.70	-748.50	-829.50
CAediting_423971	ENST00000339397.4	chr5_122028389_+	-751.40	-748.50	-829.50
CAediting_423972	ENST00000339397.4	chr5_122028396_+	-753.20	-748.50	-829.50
CAediting_423973	ENST00000339397.4	chr5_122028404_+	-748.50	-748.50	-829.50
CAediting_423974	ENST00000339397.4	chr5_122028406_+	-748.50	-748.50	-829.50
CAediting_423975	ENST00000339397.4	chr5_122028407_+	-748.80	-748.50	-829.50
CAediting_423976	ENST00000339397.4	chr5_122028422_+	-748.50	-748.50	-829.50
CAediting_423977	ENST00000339397.4	chr5_122028428_+	-751.50	-748.50	-829.50
CAediting_423978	ENST00000339397.4	chr5_122028430_+	-749.00	-748.50	-829.50
CAediting_423979	ENST00000339397.4	chr5_122028441_+	-750.70	-748.50	-829.50
CAediting_423980	ENST00000339397.4	chr5_122028444_+	-750.30	-748.50	-829.50
CAediting_423981	ENST00000339397.4	chr5_122028445_+	-750.60	-748.50	-829.50
CAediting_423982	ENST00000339397.4	chr5_122028446_+	-750.00	-748.50	-829.50
CAediting_423983	ENST00000339397.4	chr5_122028447_+	-751.70	-748.50	-829.50
CAediting_423984	ENST00000339397.4	chr5_122028448_+	-750.30	-748.50	-829.50
CAediting_423985	ENST00000339397.4	chr5_122028450_+	-748.80	-748.50	-829.50
CAediting_423986	ENST00000339397.4	chr5_122028457_+	-750.10	-748.50	-829.50
CAediting_423987	ENST00000339397.4	chr5_122028460_+	-753.00	-748.50	-829.50
CAediting_423988	ENST00000339397.4	chr5_122028464_+	-750.00	-748.50	-829.50
CAediting_423989	ENST00000339397.4	chr5_122028486_+	-750.00	-748.50	-829.50
CAediting_423990	ENST00000339397.4	chr5_122028487_+	-750.40	-748.50	-829.50
CAediting_423991	ENST00000339397.4	chr5_122028500_+	-748.50	-748.50	-829.50
CAediting_423992	ENST00000339397.4	chr5_122028509_+	-751.80	-748.50	-829.50
CAediting_423993	ENST00000339397.4	chr5_122028519_+	-748.50	-748.50	-829.50
CAediting_423994	ENST00000339397.4	chr5_122028527_+	-748.00	-748.50	-829.50
CAediting_423995	ENST00000339397.4	chr5_122028528_+	-755.20	-748.50	-829.50
CAediting_423996	ENST00000339397.4	chr5_122028548_+	-747.80	-748.50	-829.50
CAediting_423997	ENST00000339397.4	chr5_122028552_+	-747.60	-748.50	-829.50
CAediting_423998	ENST00000339397.4	chr5_122028556_+	-749.10	-748.50	-829.50
CAediting_423999	ENST00000339397.4	chr5_122028557_+	-749.30	-748.50	-829.50
CAediting_424000	ENST00000339397.4	chr5_122028559_+	-747.90	-748.50	-829.50
CAediting_424001	ENST00000339397.4	chr5_122028564_+	-747.80	-748.50	-829.50
CAediting_424002	ENST00000339397.4	chr5_122028577_+	-748.50	-748.50	-829.50
CAediting_424003	ENST00000339397.4	chr5_122028589_+	-747.80	-748.50	-829.50
CAediting_424004	ENST00000339397.4	chr5_122028610_+	-748.60	-748.50	-829.50

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Relation with ADAR for SRFBP1

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
BLCA	CAediting_423949	chr5_122027179_+	0.000213267300507497	0.251688531079389	.	.	.	.
LGG	CAediting_423949	chr5_122027179_+	.	.	.	.	0.0303930141897951	0.112420422161405
BRCA	CAediting_423949	chr5_122027179_+	2.8367360895461e-21	0.298970121369245	.	.	.	.
CESC	CAediting_423949	chr5_122027179_+	0.000992294977246995	0.225627639266019	0.00843049249700161	0.181358158916535	.	.
LUAD	CAediting_423949	chr5_122027179_+	0.0162563153487896	0.131808986041178	.	.	.	.
COAD	CAediting_423949	chr5_122027179_+	0.000165932131462254	0.235526248655797	.	.	.	.
LUSC	CAediting_423949	chr5_122027179_+	0.00122237033934608	0.163582229435165	.	.	.	.
GBM	CAediting_423949	chr5_122027179_+	1.17429966854043e-05	0.349393641975249	.	.	.	.
PRAD	CAediting_423949	chr5_122027179_+	0.00568170709412612	0.151704598710939	.	.	.	.
HNSC	CAediting_423949	chr5_122027179_+	0.0119933081993944	0.131202834155824	.	.	.	.
STAD	CAediting_423949	chr5_122027179_+	0.000306814085646646	0.194876951664589	.	.	.	.
THCA	CAediting_423949	chr5_122027179_+	0.00374323850554493	0.145549577175915	.	.	.	.
KIRC	CAediting_423949	chr5_122027179_+	0.00112198110482995	0.154127723576283	.	.	0.000634333356815175	0.161528935187765
UCEC	CAediting_423949	chr5_122027179_+	0.00597070920323753	0.222046665205697	0.00301955868459841	0.239029419719899	0.00423110751229241	0.230773743433571
KIRP	CAediting_423949	chr5_122027179_+	0.000319404476098388	0.303001396838861	.	.	.	.
ESCA	CAediting_423949	chr5_122027179_+	0.00195446238818151	0.25174257030282	.	.	.	.
OV	CAediting_423949	chr5_122027179_+	0.0106873326178046	0.137481812593468	.	.	.	.
PAAD	CAediting_423949	chr5_122027179_+	.	.	.	.	0.0473824503160079	0.196833648323805
PCPG	CAediting_423949	chr5_122027179_+	0.00250709587450799	0.366032054037424	.	.	.	.
SKCM	CAediting_423949	chr5_122027179_+	3.70475043250534e-05	0.22985480570331	.	.	.	.
BLCA	CAediting_423950	chr5_122027180_+	0.000548710310573144	0.244033812155343	.	.	.	.
LGG	CAediting_423950	chr5_122027180_+	.	.	0.0404948463286086	0.107883764654298	0.0231843729971633	0.119479853345129
BRCA	CAediting_423950	chr5_122027180_+	1.08106137384747e-19	0.290163388176405	.	.	.	.
CESC	CAediting_423950	chr5_122027180_+	0.000161051706268484	0.259337003982309	0.00806199564567889	0.183693054329184	0.0239791649194929	0.156881669116613
LUAD	CAediting_423950	chr5_122027180_+	0.0155664926276837	0.133677810385197	.	.	.	.
COAD	CAediting_423950	chr5_122027180_+	8.5672962529195e-06	0.283438945809982	.	.	.	.
LUSC	CAediting_423950	chr5_122027180_+	1.59211769632315e-05	0.22141398566294	.	.	.	.
GBM	CAediting_423950	chr5_122027180_+	0.000214172644621204	0.300776755581666	.	.	.	.
PRAD	CAediting_423950	chr5_122027180_+	0.000140015652204456	0.213613828310317	.	.	.	.
HNSC	CAediting_423950	chr5_122027180_+	0.000255798665633895	0.192114653217133	.	.	.	.
STAD	CAediting_423950	chr5_122027180_+	0.000105837848496267	0.210226404141385	0.00962095993649069	0.14127892968429	.	.
THCA	CAediting_423950	chr5_122027180_+	0.000244983454865115	0.182177440987536	.	.	.	.
KIRC	CAediting_423950	chr5_122027180_+	0.00191246711274753	0.148744130457928	.	.	.	.
UCEC	CAediting_423950	chr5_122027180_+	0.0180866247716219	0.196093583682257	0.041412213980729	0.169600138894668	.	.
KIRP	CAediting_423950	chr5_122027180_+	0.00189041684367668	0.270023303902613	.	.	.	.
ESCA	CAediting_423950	chr5_122027180_+	0.00457259256771312	0.229582828131284	.	.	.	.
LAML	CAediting_423950	chr5_122027180_+	.	.	0.0449013374538505	0.2667206712098	.	.
OV	CAediting_423950	chr5_122027180_+	4.39895630646674e-06	0.245027183810377	.	.	.	.
PCPG	CAediting_423950	chr5_122027180_+	0.0324903556395925	0.269788865700089	.	.	.	.
SKCM	CAediting_423950	chr5_122027180_+	1.7463414453369e-06	0.26597933514544	.	.	.	.
BLCA	CAediting_423953	chr5_122027209_+	0.0267204820086073	0.281392934645377	.	.	.	.
LUAD	CAediting_423953	chr5_122027209_+	.	.	5.8490912149123e-07	0.484018582272518	.	.
STAD	CAediting_423953	chr5_122027209_+	.	.	0.00277934248563252	0.22050204121091	.	.
OV	CAediting_423953	chr5_122027209_+	0.0199917353975786	0.183797574821213	.	.	.	.
STAD	CAediting_423954	chr5_122027214_+	.	.	0.0114231617060194	0.286867007432289	0.0401135643005011	0.234476308145123
OV	CAediting_423954	chr5_122027214_+	0.00623141544813412	0.364427614558204	.	.	.	.
BRCA	CAediting_424005	chr5_122030685_+	.	.	0.0257168678814256	0.266547363071821	.	.
BRCA	CAediting_424006	chr5_122030686_+	0.000529652343076604	0.205428711611	.	.	.	.
OV	CAediting_424006	chr5_122030686_+	0.0234306029660683	0.261514588868635	.	.	.	.
BRCA	CAediting_424008	chr5_122030688_+	0.00598296684128971	0.160500594008323	.	.	.	.
LUAD	CAediting_424008	chr5_122030688_+	0.0195220210500279	0.332654045319181	.	.	.	.
STAD	CAediting_424008	chr5_122030688_+	.	.	.	.	0.00504286546377595	0.383231833391133
BRCA	CAediting_424009	chr5_122030690_+	9.92198302187918e-27	0.433764343338966	.	.	.	.
LUAD	CAediting_424009	chr5_122030690_+	0.000973186415773071	0.289242935276268	.	.	.	.
STAD	CAediting_424009	chr5_122030690_+	.	.	.	.	0.000226809442541249	0.312267028931107
OV	CAediting_424009	chr5_122030690_+	0.000868454150742461	0.250222203737815	.	.	.	.
SKCM	CAediting_424009	chr5_122030690_+	0.0341244629531499	0.18817288717292	.	.	.	.
BRCA	CAediting_424012	chr5_122030715_+	3.16339605615355e-22	0.487423902322526	.	.	.	.
LUAD	CAediting_424012	chr5_122030715_+	2.10223225956288e-05	0.527394977823669	.	.	.	.
STAD	CAediting_424012	chr5_122030715_+	0.000681650550730795	0.295253938947241	.	.	.	.
ESCA	CAediting_424012	chr5_122030715_+	0.0224311155425249	0.278607049187694	.	.	.	.
OV	CAediting_424012	chr5_122030715_+	0.000114463611032018	0.304913572165448	.	.	.	.
SKCM	CAediting_424012	chr5_122030715_+	0.00039657214908507	0.461034230445756	.	.	.	.
BRCA	CAediting_424013	chr5_122030723_+	1.64937544562368e-26	0.501170816811753	.	.	.	.
LUAD	CAediting_424013	chr5_122030723_+	4.9165978694756e-06	0.483131226842151	.	.	.	.
THCA	CAediting_424013	chr5_122030723_+	.	.	.	.	0.0143544122353671	0.253147698508202
ESCA	CAediting_424013	chr5_122030723_+	0.000975656159788257	0.373170883086512	.	.	.	.
OV	CAediting_424013	chr5_122030723_+	0.000203276380529019	0.268457227898992	.	.	.	.
SKCM	CAediting_424013	chr5_122030723_+	0.000619117924691948	0.432742341505059	.	.	.	.
BLCA	CAediting_424015	chr5_122031395_+	0.000226551469403916	0.462434521390591	.	.	.	.
BRCA	CAediting_424015	chr5_122031395_+	2.25182578477163e-11	0.303020969355574	.	.	.	.
LUAD	CAediting_424015	chr5_122031395_+	0.000416374906808637	0.319745932747563	.	.	.	.
LUSC	CAediting_424015	chr5_122031395_+	0.0274858814713009	0.287079045775809	.	.	.	.
ESCA	CAediting_424015	chr5_122031395_+	0.0439772541804635	0.267839019930993	.	.	.	.
SKCM	CAediting_424015	chr5_122031395_+	0.0252465189721353	0.231991631590431	.	.	.	.
BRCA	CAediting_424016	chr5_122031396_+	3.33515101182564e-22	0.393691961500249	.	.	.	.
LIHC	CAediting_424016	chr5_122031396_+	0.00050901376640248	0.410398768670245	.	.	.	.
CESC	CAediting_424016	chr5_122031396_+	1.4582619760459e-05	0.456249404906267	.	.	.	.
LUAD	CAediting_424016	chr5_122031396_+	0.0019153863756671	0.250563750779891	.	.	.	.
COAD	CAediting_424016	chr5_122031396_+	0.0117376624401428	0.346956421677195	.	.	.	.
LUSC	CAediting_424016	chr5_122031396_+	0.0100224688196549	0.271642107157152	.	.	.	.
THCA	CAediting_424016	chr5_122031396_+	0.0141810878229776	0.201926101685249	.	.	.	.
ESCA	CAediting_424016	chr5_122031396_+	0.0259774934092483	0.247380381977798	.	.	.	.
SKCM	CAediting_424016	chr5_122031396_+	0.00713954555371928	0.224850860283951	.	.	.	.
TGCT	CAediting_424016	chr5_122031396_+	3.57290925353231e-06	0.554305639630618	.	.	.	.
BLCA	CAediting_424017	chr5_122031397_+	5.72004726264866e-09	0.408828001713698	.	.	.	.
LGG	CAediting_424017	chr5_122031397_+	3.09751224154259e-05	0.34673619175001	.	.	.	.
BRCA	CAediting_424017	chr5_122031397_+	6.4415948730572e-60	0.507863895012505	.	.	.	.
LIHC	CAediting_424017	chr5_122031397_+	2.05531039607112e-06	0.429567014337063	.	.	.	.
CESC	CAediting_424017	chr5_122031397_+	3.66170945676071e-12	0.474310618758104	.	.	.	.
LUAD	CAediting_424017	chr5_122031397_+	4.02281301250496e-10	0.349844408043208	.	.	.	.
COAD	CAediting_424017	chr5_122031397_+	1.40210659273734e-08	0.42037927923762	0.000124723069802764	0.291717590237829	.	.
LUSC	CAediting_424017	chr5_122031397_+	3.96770463524843e-08	0.346731771383189	.	.	0.0303109232453299	0.140443958232445
GBM	CAediting_424017	chr5_122031397_+	0.017049331976196	0.253760925760666	.	.	.	.
PRAD	CAediting_424017	chr5_122031397_+	1.92648361408247e-15	0.432737340364208	.	.	.	.
HNSC	CAediting_424017	chr5_122031397_+	1.10093278112453e-08	0.342620477893661	0.0404966438321795	0.126179882282957	.	.
STAD	CAediting_424017	chr5_122031397_+	3.14954639367048e-09	0.366330802743668	.	.	.	.
THCA	CAediting_424017	chr5_122031397_+	3.85796355462867e-09	0.291925996337164	.	.	.	.
KIRC	CAediting_424017	chr5_122031397_+	2.70578084684414e-05	0.211069124041414	.	.	.	.
UCEC	CAediting_424017	chr5_122031397_+	3.31948917113524e-06	0.360293157687451	.	.	.	.
KIRP	CAediting_424017	chr5_122031397_+	0.000102341114898248	0.320222540784527	.	.	.	.
ESCA	CAediting_424017	chr5_122031397_+	5.25317174754974e-06	0.370469285916017	.	.	.	.
OV	CAediting_424017	chr5_122031397_+	1.11804267086874e-08	0.335324953592856	.	.	.	.
PAAD	CAediting_424017	chr5_122031397_+	0.0269859292853592	0.234477942295536	.	.	.	.
PCPG	CAediting_424017	chr5_122031397_+	0.00506268418762134	0.372792520234842	.	.	.	.
SKCM	CAediting_424017	chr5_122031397_+	6.54293642396002e-18	0.470240748098754	.	.	.	.
MESO	CAediting_424017	chr5_122031397_+	0.00611482893629219	0.371841858766271	.	.	.	.
READ	CAediting_424017	chr5_122031397_+	6.68562866284153e-05	0.499017171445969	.	.	.	.
SARC	CAediting_424017	chr5_122031397_+	6.83679831272432e-05	0.361067819739749	.	.	.	.
TGCT	CAediting_424017	chr5_122031397_+	4.68198238646034e-08	0.529972973249156	.	.	.	.
THYM	CAediting_424017	chr5_122031397_+	6.533176127428e-06	0.516457743785894	.	.	.	.
BLCA	CAediting_424018	chr5_122031398_+	0.000221233137622009	0.290700536589191	.	.	.	.
BRCA	CAediting_424018	chr5_122031398_+	3.31272278210347e-35	0.409415699576427	.	.	.	.
LIHC	CAediting_424018	chr5_122031398_+	2.36807504984454e-05	0.407287400728665	.	.	.	.
CESC	CAediting_424018	chr5_122031398_+	8.90239787140175e-09	0.41986535902508	.	.	.	.
LUAD	CAediting_424018	chr5_122031398_+	2.67172020173963e-05	0.254920603920234	.	.	.	.
COAD	CAediting_424018	chr5_122031398_+	1.01254005877679e-06	0.40768350762534	0.0224464940999824	0.197105440289873	.	.
LUSC	CAediting_424018	chr5_122031398_+	3.71153945947432e-06	0.315262835586078	.	.	0.0406840294854089	0.142394525072759
PRAD	CAediting_424018	chr5_122031398_+	3.95768821503137e-09	0.356743207900203	.	.	.	.
HNSC	CAediting_424018	chr5_122031398_+	0.0112699867009035	0.166837312978977	0.0297276926572165	0.143369391371175	.	.
STAD	CAediting_424018	chr5_122031398_+	8.52264346581774e-06	0.297724570702812	.	.	.	.
THCA	CAediting_424018	chr5_122031398_+	4.55528830544855e-05	0.218605504356056	.	.	.	.
KIRC	CAediting_424018	chr5_122031398_+	0.0024282692466691	0.160676352609051	.	.	.	.
UCEC	CAediting_424018	chr5_122031398_+	0.00116362664122464	0.272684899247058	.	.	.	.
ESCA	CAediting_424018	chr5_122031398_+	0.0105961593120012	0.221780748532599	.	.	.	.
SKCM	CAediting_424018	chr5_122031398_+	4.50578192293172e-12	0.40695480418109	.	.	.	.
TGCT	CAediting_424018	chr5_122031398_+	7.85432286454942e-06	0.451732587050991	.	.	.	.
BLCA	CAediting_424019	chr5_122031404_+	4.49847523475346e-16	0.492572580183384	.	.	.	.
LGG	CAediting_424019	chr5_122031404_+	5.48706024168881e-05	0.288310173746417	.	.	.	.
BRCA	CAediting_424019	chr5_122031404_+	7.16443975698402e-72	0.537536727758086	.	.	.	.
LIHC	CAediting_424019	chr5_122031404_+	1.74452263897401e-05	0.400535885209124	.	.	.	.
CESC	CAediting_424019	chr5_122031404_+	1.67305357951149e-16	0.503415272020679	.	.	.	.
LUAD	CAediting_424019	chr5_122031404_+	2.19931873907399e-14	0.415106183814569	.	.	.	.
COAD	CAediting_424019	chr5_122031404_+	9.30808867835737e-16	0.49803399938482	0.00135064740937442	0.210564755180315	.	.
LUSC	CAediting_424019	chr5_122031404_+	1.27803940772541e-13	0.406727005023105	.	.	0.0243340060306418	0.128718509604996
GBM	CAediting_424019	chr5_122031404_+	0.0246920532409616	0.212201961341431	.	.	.	.
PRAD	CAediting_424019	chr5_122031404_+	1.14377007813802e-22	0.473874169221172	.	.	.	.
HNSC	CAediting_424019	chr5_122031404_+	2.11072286738393e-16	0.436381209431966	0.0107335909044755	0.142006884322103	.	.
STAD	CAediting_424019	chr5_122031404_+	2.38252181561713e-06	0.284094587176604	.	.	.	.
THCA	CAediting_424019	chr5_122031404_+	5.82419999311326e-15	0.355383373527256	.	.	.	.
KIRC	CAediting_424019	chr5_122031404_+	7.64425287517335e-10	0.286938992616582	.	.	.	.
UCEC	CAediting_424019	chr5_122031404_+	3.62472190118236e-12	0.465841344114706	.	.	.	.
KIRP	CAediting_424019	chr5_122031404_+	1.66069310617362e-05	0.314953889374712	.	.	.	.
ESCA	CAediting_424019	chr5_122031404_+	4.47102343200109e-06	0.368190325532182	.	.	.	.
OV	CAediting_424019	chr5_122031404_+	2.53158573848844e-11	0.372765597651788	.	.	.	.
PCPG	CAediting_424019	chr5_122031404_+	0.000208538381951004	0.476053931180522	0.0393583330723965	0.276183965371543	.	.
SKCM	CAediting_424019	chr5_122031404_+	6.01300169803837e-27	0.534426391788335	.	.	.	.
MESO	CAediting_424019	chr5_122031404_+	3.55218872772805e-05	0.518844321882035	.	.	.	.
READ	CAediting_424019	chr5_122031404_+	5.17307048598945e-06	0.482145649218675	.	.	.	.
SARC	CAediting_424019	chr5_122031404_+	2.34941939812862e-07	0.409595930127566	.	.	.	.
TGCT	CAediting_424019	chr5_122031404_+	1.06468772507259e-07	0.490799965997466	.	.	.	.
THYM	CAediting_424019	chr5_122031404_+	6.8817283432503e-10	0.622825476065198	.	.	0.00485199111477753	0.311927724443598
BLCA	CAediting_424021	chr5_122031407_+	0.00236452102583652	0.300726770797894	.	.	.	.
BRCA	CAediting_424021	chr5_122031407_+	7.2533225183956e-35	0.457055506881259	.	.	.	.
LIHC	CAediting_424021	chr5_122031407_+	0.00441435241617504	0.321052586198369	.	.	.	.
CESC	CAediting_424021	chr5_122031407_+	0.000235256051001054	0.324575062047091	.	.	.	.
LUAD	CAediting_424021	chr5_122031407_+	1.89622918046716e-08	0.41462207238115	.	.	.	.
COAD	CAediting_424021	chr5_122031407_+	0.0312854877721968	0.218826414787781	.	.	.	.
LUSC	CAediting_424021	chr5_122031407_+	0.0339353159097436	0.183374052448408	.	.	.	.
PRAD	CAediting_424021	chr5_122031407_+	0.0139756577133431	0.212689195322932	.	.	.	.
HNSC	CAediting_424021	chr5_122031407_+	0.000143262814116287	0.288398206477749	0.0071392218770385	0.206245507756991	.	.
STAD	CAediting_424021	chr5_122031407_+	3.92738486057575e-06	0.332757434504406	.	.	.	.
THCA	CAediting_424021	chr5_122031407_+	0.0017690221443838	0.208699432731479	.	.	.	.
KIRC	CAediting_424021	chr5_122031407_+	0.00954160142923289	0.174405678300264	.	.	.	.
ESCA	CAediting_424021	chr5_122031407_+	0.000199314625827126	0.352159844871632	.	.	.	.
OV	CAediting_424021	chr5_122031407_+	0.0044539519482235	0.200320111027824	.	.	.	.
SKCM	CAediting_424021	chr5_122031407_+	4.82513364605249e-12	0.476410198027945	.	.	.	.
SARC	CAediting_424021	chr5_122031407_+	0.000455906621461616	0.442069318926471	.	.	.	.
TGCT	CAediting_424021	chr5_122031407_+	0.000212577709774921	0.447077674867536	.	.	.	.
BRCA	CAediting_424027	chr5_122031438_+	3.3575232200251e-11	0.30017750687031	.	.	.	.
CESC	CAediting_424027	chr5_122031438_+	0.0123103468213376	0.268862907811581	.	.	.	.
STAD	CAediting_424027	chr5_122031438_+	0.00744037676085108	0.248371178400736	.	.	8.67451491830263e-05	0.357724264609922
OV	CAediting_424027	chr5_122031438_+	0.0151963724787463	0.191049700750449	.	.	.	.
SKCM	CAediting_424027	chr5_122031438_+	2.35811456674688e-06	0.39895907656228	.	.	.	.
TGCT	CAediting_424027	chr5_122031438_+	2.21692200260244e-06	0.51247387537262	.	.	.	.
BRCA	CAediting_424029	chr5_122031443_+	.	.	.	.	0.0258512467443619	0.278507515610867
BLCA	CAediting_424030	chr5_122031444_+	0.000774763669535063	0.340844962274949	.	.	.	.
BRCA	CAediting_424030	chr5_122031444_+	2.32369375193237e-11	0.2784691453672	.	.	.	.
LIHC	CAediting_424030	chr5_122031444_+	0.0242395795923164	0.216762435145686	.	.	.	.
CESC	CAediting_424030	chr5_122031444_+	0.0452234795153493	0.185519068627779	.	.	.	.
LUAD	CAediting_424030	chr5_122031444_+	1.93507631893107e-06	0.34617574045855	.	.	.	.
LUSC	CAediting_424030	chr5_122031444_+	0.000488526358769096	0.325588251157354	.	.	.	.
STAD	CAediting_424030	chr5_122031444_+	.	.	.	.	0.0330980539001849	0.180231591764429
THCA	CAediting_424030	chr5_122031444_+	0.00419190007188993	0.239744469057327	.	.	.	.
ESCA	CAediting_424030	chr5_122031444_+	0.0182205056519486	0.261820497385229	.	.	.	.
OV	CAediting_424030	chr5_122031444_+	0.000353851779461996	0.251375526738962	.	.	.	.
SKCM	CAediting_424030	chr5_122031444_+	1.8248128954994e-08	0.456533173213262	.	.	.	.
TGCT	CAediting_424030	chr5_122031444_+	9.51851076890781e-08	0.551479588061891	.	.	.	.
BLCA	CAediting_424031	chr5_122031445_+	7.61433317724924e-08	0.371587896618344	0.0362449478383794	0.149316099789627	.	.
LGG	CAediting_424031	chr5_122031445_+	3.69616371851559e-07	0.429869879125316	.	.	.	.
BRCA	CAediting_424031	chr5_122031445_+	2.79098126434827e-53	0.485692507558197	.	.	.	.
LIHC	CAediting_424031	chr5_122031445_+	0.000967201088769895	0.25383179489905	.	.	.	.
CESC	CAediting_424031	chr5_122031445_+	1.16736519264834e-07	0.356529696395721	.	.	.	.
LUAD	CAediting_424031	chr5_122031445_+	3.15622553797388e-11	0.361088005158051	.	.	.	.
COAD	CAediting_424031	chr5_122031445_+	0.000143229259832752	0.311663639974983	.	.	.	.
LUSC	CAediting_424031	chr5_122031445_+	7.15883104710574e-08	0.320641450097322	.	.	.	.
GBM	CAediting_424031	chr5_122031445_+	0.0121954276629417	0.280774354442799	0.0221894589417456	0.257076385752583	.	.
PRAD	CAediting_424031	chr5_122031445_+	3.51993340414911e-08	0.332469295468132	.	.	.	.
HNSC	CAediting_424031	chr5_122031445_+	1.71408300026398e-08	0.325168293793146	0.00389808331738153	0.169873894116343	.	.
STAD	CAediting_424031	chr5_122031445_+	5.23806312596102e-07	0.314626202353254	.	.	.	.
THCA	CAediting_424031	chr5_122031445_+	2.54510059974545e-07	0.265480620134936	.	.	.	.
KIRC	CAediting_424031	chr5_122031445_+	0.00039305953652356	0.181643581328734	.	.	.	.
UCEC	CAediting_424031	chr5_122031445_+	1.00305847309624e-10	0.496824581463373	.	.	.	.
ESCA	CAediting_424031	chr5_122031445_+	0.000589848789435215	0.293046810013931	.	.	.	.
OV	CAediting_424031	chr5_122031445_+	1.05138828659084e-10	0.371152543226737	.	.	.	.
PAAD	CAediting_424031	chr5_122031445_+	0.000608469338263665	0.391790101387771	.	.	.	.
SKCM	CAediting_424031	chr5_122031445_+	3.64582832348812e-21	0.514075384023201	.	.	.	.
MESO	CAediting_424031	chr5_122031445_+	8.37219812317961e-08	0.635471866171724	.	.	.	.
SARC	CAediting_424031	chr5_122031445_+	0.000174509843891529	0.332156111280624	.	.	.	.
TGCT	CAediting_424031	chr5_122031445_+	1.15844867591907e-10	0.561803366308643	.	.	.	.
THYM	CAediting_424031	chr5_122031445_+	0.00015446085696952	0.446127129359115	.	.	0.042463810631415	0.248646815510449
BLCA	CAediting_424032	chr5_122031446_+	0.0102932617484102	0.281903366669756	.	.	.	.
BRCA	CAediting_424032	chr5_122031446_+	3.78530523887217e-09	0.262229482710352	.	.	.	.
LUAD	CAediting_424032	chr5_122031446_+	3.51969225442215e-07	0.399113752962047	.	.	.	.
ESCA	CAediting_424032	chr5_122031446_+	0.0159158433314646	0.283232822837283	.	.	.	.
SKCM	CAediting_424032	chr5_122031446_+	0.00368817910407318	0.257894734293633	.	.	.	.
TGCT	CAediting_424032	chr5_122031446_+	1.16850999377314e-05	0.488383118945599	.	.	.	.
BLCA	CAediting_424033	chr5_122031447_+	0.045202499636131	0.183964928023891	.	.	.	.
BRCA	CAediting_424033	chr5_122031447_+	1.6407703184171e-18	0.327930855770419	.	.	.	.
CESC	CAediting_424033	chr5_122031447_+	0.000100335634156448	0.327330497824705	.	.	.	.
LUSC	CAediting_424033	chr5_122031447_+	0.0352972378589402	0.17202268576475	.	.	.	.
STAD	CAediting_424033	chr5_122031447_+	.	.	.	.	0.00229627566133324	0.234400946927097
SKCM	CAediting_424033	chr5_122031447_+	1.69834702698856e-07	0.366588940346842	.	.	.	.
TGCT	CAediting_424033	chr5_122031447_+	0.000284159042447341	0.397691499621993	.	.	.	.

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Relation with cancer stages for SRFBP1

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
BLCA	pathologic_stage	CAediting_423949	chr5_122027179_+	0.018769525497764	0.161680525231149
BLCA	pathologic_stage	CAediting_423950	chr5_122027180_+	0.049799775729803	0.140323478100887
BLCA	pathologic_stage	CAediting_424032	chr5_122031446_+	0.0109703307699211	0.281268128755766
BLCA	pathologic_stage	CAediting_424033	chr5_122031447_+	0.00794369605428006	0.243269484898246
BRCA	pathologic_stage	CAediting_424012	chr5_122030715_+	0.00751859359307028	0.14494305223237
BRCA	pathologic_stage	CAediting_424013	chr5_122030723_+	0.0328661235708906	0.108775023535457
BRCA	pathologic_stage	CAediting_424016	chr5_122031396_+	0.0361420244817696	0.0894508832110769
BRCA	pathologic_stage	CAediting_424017	chr5_122031397_+	0.0216097532568773	0.0776075105502173
CESC	clinical_stage	CAediting_423949	chr5_122027179_+	0.0227191002339863	0.158299542643901
CESC	clinical_stage	CAediting_423950	chr5_122027180_+	0.00412438945453885	0.199545220055509
COAD	pathologic_stage	CAediting_424033	chr5_122031447_+	0.0055383302069606	-0.319407500600452
ESCA	clinical_stage	CAediting_424016	chr5_122031396_+	0.0141001919550124	0.458634552242499
ESCA	pathologic_stage	CAediting_424012	chr5_122030715_+	0.0121375012843536	0.309422367956261
ESCA	pathologic_stage	CAediting_424015	chr5_122031395_+	0.0322783907243066	0.300280239971651
HNSC	clinical_stage	CAediting_423949	chr5_122027179_+	0.0164604658517762	0.126346705707731
HNSC	clinical_stage	CAediting_423950	chr5_122027180_+	0.0124697645107336	0.133243604959845
HNSC	clinical_stage	CAediting_424032	chr5_122031446_+	0.0172303398465235	-0.211047021815657
HNSC	pathologic_stage	CAediting_424032	chr5_122031446_+	0.00997074990965225	-0.235374628337088
KIRC	pathologic_stage	CAediting_424017	chr5_122031397_+	0.00310919232558031	0.149933612603038
KIRC	pathologic_stage	CAediting_424018	chr5_122031398_+	0.031506171239123	0.114495401877841
KIRC	pathologic_stage	CAediting_424019	chr5_122031404_+	0.00753745471214789	0.126944504631918
KIRC	pathologic_stage	CAediting_424033	chr5_122031447_+	0.0122646014981748	0.159143974970476
KIRP	clinical_stage	CAediting_424017	chr5_122031397_+	0.0209466671568018	0.236649983816954
KIRP	clinical_stage	CAediting_424019	chr5_122031404_+	0.0360797022304524	0.189213693978906
KIRP	pathologic_stage	CAediting_424019	chr5_122031404_+	0.000281887210021874	0.280848166328888
LIHC	pathologic_stage	CAediting_423950	chr5_122027180_+	0.0395809221237577	0.175431376361307
LUSC	pathologic_stage	CAediting_423950	chr5_122027180_+	0.0459236491187852	0.10384267299306
LUSC	pathologic_stage	CAediting_424018	chr5_122031398_+	0.0170491414783618	-0.166070523250508
LUSC	pathologic_stage	CAediting_424033	chr5_122031447_+	0.0187736341103497	0.192337852015251
SKCM	pathologic_stage	CAediting_424012	chr5_122030715_+	0.0221504853475175	-0.316740342001061
TGCT	clinical_stage	CAediting_424019	chr5_122031404_+	0.0382744093025078	-0.270475823070914
TGCT	pathologic_stage	CAediting_424017	chr5_122031397_+	0.00422753780900434	-0.397779399512315
TGCT	pathologic_stage	CAediting_424019	chr5_122031404_+	0.00969908600019383	-0.336948638195539
TGCT	pathologic_stage	CAediting_424021	chr5_122031407_+	0.0022622852250153	-0.513089609712688
TGCT	pathologic_stage	CAediting_424031	chr5_122031445_+	0.0295826229578444	-0.283470720415553
UCEC	clinical_stage	CAediting_424016	chr5_122031396_+	0.0423509100796743	0.26297834468135

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Relation with survival for SRFBP1

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
LIHC	CAediting_424031	chr5_122031445_+	0.0248362762878122	0.0115887	0.112586
LUAD	CAediting_424017	chr5_122031397_+	0.0146121215764778	0.0426212	3.65993
LUSC	CAediting_424031	chr5_122031445_+	0.0161182598428797	0.0460143	5.0975
STAD	CAediting_424008	chr5_122030688_+	0.0310906963632034	0.0222538	4926.9
UCEC	CAediting_424019	chr5_122031404_+	0.0128659705153925	0.0323721	7.10205
KIRP	CAediting_424017	chr5_122031397_+	0.029219874622052	0.0192235	652.617

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RelatedDrugs for SRFBP1

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for SRFBP1

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene