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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: CREBRF (CAeditome ID:153222)

Gene summary for CREBRF

check button Gene summary
Gene informationGene symbol

CREBRF

Gene ID

153222

Gene nameCREB3 regulatory factor
SynonymsC5orf41|LRF
Cytomap

5q35.1

Type of geneprotein-coding
DescriptionCREB3 regulatory factorUPF0474 protein C5orf41adult retina proteinluman recruitment factorluman-recruiting factorluman/CREB3 recruitment factor
Modification date20210518
UniProtAcc

Q8IUR6

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
CREBRF

GO:0000977

CREB3 regulatory factor

16940180

CREBRF

GO:0001228

CREB3 regulatory factor

16940180

CREBRF

GO:0045944

CREB3 regulatory factor

16940180

CREBRF

GO:0005654

CREB3 regulatory factor

0000052


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RNA A-to-I events for CREBRF

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000164463.11

check button RNA A-to-I editing events in Cancer.
CAediting_448523(173060330, +), CAediting_448524(173060397, +), CAediting_448525(173060420, +), CAediting_448526(173060421, +), CAediting_448527(173060431, +), CAediting_448528(173060432, +), CAediting_448529(173060459, +), CAediting_448530(173060511, +), CAediting_448531(173067742, +), CAediting_448532(173068813, +), CAediting_448533(173068814, +), CAediting_448534(173068859, +), CAediting_448535(173068870, +), CAediting_448536(173068951, +), CAediting_448537(173068961, +), CAediting_448538(173069363, +), CAediting_448539(173069365, +), CAediting_448540(173069436, +), CAediting_448541(173069995, +), CAediting_448542(173070024, +), CAediting_448543(173070034, +), CAediting_448544(173070093, +), CAediting_448545(173070140, +), CAediting_448546(173072237, +), CAediting_448547(173072241, +), CAediting_448548(173072638, +), CAediting_448549(173072649, +), CAediting_448550(173074047, +), CAediting_448551(173074155, +), CAediting_448552(173075971, +), CAediting_448553(173075988, +), CAediting_448554(173075992, +), CAediting_448555(173076042, +), CAediting_448556(173076495, +), CAediting_448557(173076496, +), CAediting_448558(173076501, +), CAediting_448559(173076509, +), CAediting_448560(173076517, +), CAediting_448561(173076518, +), CAediting_448562(173076541, +), CAediting_448563(173076555, +), CAediting_448564(173076564, +), CAediting_448565(173076565, +), CAediting_448566(173076574, +), CAediting_448567(173076575, +), CAediting_448568(173076586, +), CAediting_448569(173076589, +), CAediting_448570(173076590, +), CAediting_448571(173076591, +), CAediting_448572(173076592, +), CAediting_448573(173076593, +), CAediting_448574(173076595, +), CAediting_448575(173076598, +), CAediting_448576(173076603, +), CAediting_448577(173076606, +), CAediting_448578(173076610, +), CAediting_448579(173076635, +), CAediting_448580(173076636, +), CAediting_448581(173076649, +), CAediting_448582(173076658, +), CAediting_448583(173076697, +), CAediting_448584(173076701, +), CAediting_448585(173076713, +), CAediting_448586(173077005, +), CAediting_448587(173077018, +), CAediting_448588(173077044, +), CAediting_448589(173077213, +), CAediting_448590(173077472, +), CAediting_448591(173077486, +), CAediting_448592(173077493, +), CAediting_448593(173077576, +), CAediting_448594(173077582, +), CAediting_448595(173077590, +), CAediting_448596(173077668, +), CAediting_448597(173079342, +), CAediting_448598(173079343, +), CAediting_448599(173079384, +), CAediting_448600(173079388, +), CAediting_448601(173079412, +), CAediting_448602(173081651, +), CAediting_448603(173081734, +), CAediting_448604(173081742, +), CAediting_448605(173081793, +), CAediting_448606(173081799, +), CAediting_448607(173081800, +), CAediting_448608(173081888, +), CAediting_448609(173081891, +), CAediting_448610(173081892, +), CAediting_448611(173082155, +), CAediting_448612(173082179, +), CAediting_448613(173082180, +), CAediting_448614(173082636, +), CAediting_448615(173082658, +), CAediting_448616(173082661, +), CAediting_448617(173082675, +), CAediting_448618(173082721, +), CAediting_448619(173082722, +), CAediting_448620(173082732, +), CAediting_448621(173082746, +), CAediting_448622(173082755, +), CAediting_448623(173082798, +), CAediting_448624(173082805, +), CAediting_448625(173082829, +), CAediting_448626(173082864, +), CAediting_448627(173082972, +), CAediting_448628(173083066, +), CAediting_448629(173083069, +), CAediting_448630(173083117, +), CAediting_448631(173083125, +), CAediting_448632(173083134, +), CAediting_448633(173083148, +), CAediting_448634(173083149, +), CAediting_448635(173084703, +), CAediting_448636(173084775, +), CAediting_448637(173087248, +), CAediting_448638(173088976, +), CAediting_448639(173088991, +), CAediting_448640(173089032, +), CAediting_448641(173089058, +), CAediting_448642(173089059, +), CAediting_448643(173089064, +), CAediting_448644(173089072, +), CAediting_448645(173089097, +), CAediting_448646(173089108, +), CAediting_448647(173089126, +), CAediting_448648(173091903, +), CAediting_448649(173107024, +), CAediting_448650(173112162, +), CAediting_448651(173117197, +), CAediting_448652(173117217, +), CAediting_448653(173117259, +), CAediting_448654(173118988, +), CAediting_448655(173124407, +), CAediting_448656(173124427, +), CAediting_448657(173124437, +), CAediting_448658(173124438, +), CAediting_448659(173124478, +), CAediting_448660(173124499, +), CAediting_448661(173124509, +), CAediting_448662(173124510, +), CAediting_448663(173124515, +), CAediting_448664(173125949, +), CAediting_448665(173126932, +), CAediting_448666(173126937, +), CAediting_448667(173127508, +), CAediting_448668(173129450, +), CAediting_448669(173129460, +), CAediting_448670(173129464, +), CAediting_448671(173129473, +), CAediting_448672(173129488, +), CAediting_448673(173129489, +), CAediting_448674(173129493, +), CAediting_448675(173129513, +), CAediting_448676(173129536, +), CAediting_448677(173129541, +), CAediting_448678(173129551, +), CAediting_448679(173129557, +), CAediting_448680(173129563, +), CAediting_448681(173129564, +), CAediting_448682(173129565, +), CAediting_448683(173129566, +), CAediting_448684(173129568, +), CAediting_448685(173129573, +), CAediting_448686(173129574, +), CAediting_448687(173129578, +), CAediting_448688(173129582, +), CAediting_448689(173129586, +), CAediting_448690(173129604, +), CAediting_448691(173129605, +), CAediting_448692(173129618, +), CAediting_448693(173129621, +), CAediting_448694(173129627, +), CAediting_448695(173129632, +), CAediting_448696(173129634, +), CAediting_448697(173129650, +), CAediting_448698(173129670, +), CAediting_448699(173129674, +), CAediting_448700(173129675, +), CAediting_448701(173129926, +), CAediting_448702(173130594, +), CAediting_448703(173130604, +), CAediting_448704(173130657, +),

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RNA editing positional annotations for CREBRF using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_448523chr5_173060330_+ncRNA_exonic
CAediting_448524chr5_173060397_+ncRNA_exonic
CAediting_448525chr5_173060420_+ncRNA_exonic
CAediting_448526chr5_173060421_+ncRNA_exonic
CAediting_448527chr5_173060431_+ncRNA_exonic
CAediting_448528chr5_173060432_+ncRNA_exonic
CAediting_448529chr5_173060459_+ncRNA_intronic
CAediting_448530chr5_173060511_+ncRNA_intronic
CAediting_448531chr5_173067742_+ncRNA_intronic
CAediting_448532chr5_173068813_+ncRNA_intronic
CAediting_448533chr5_173068814_+ncRNA_intronic
CAediting_448534chr5_173068859_+ncRNA_intronic
CAediting_448535chr5_173068870_+ncRNA_intronic
CAediting_448536chr5_173068951_+ncRNA_intronic
CAediting_448537chr5_173068961_+ncRNA_intronic
CAediting_448538chr5_173069363_+ncRNA_intronic
CAediting_448539chr5_173069365_+ncRNA_intronic
CAediting_448540chr5_173069436_+ncRNA_intronic
CAediting_448541chr5_173069995_+ncRNA_intronic
CAediting_448542chr5_173070024_+ncRNA_intronic
CAediting_448543chr5_173070034_+ncRNA_intronic
CAediting_448544chr5_173070093_+ncRNA_intronic
CAediting_448545chr5_173070140_+ncRNA_intronic
CAediting_448546chr5_173072237_+ncRNA_intronic
CAediting_448547chr5_173072241_+ncRNA_intronic
CAediting_448548chr5_173072638_+ncRNA_intronic
CAediting_448549chr5_173072649_+ncRNA_intronic
CAediting_448550chr5_173074047_+ncRNA_intronic
CAediting_448551chr5_173074155_+ncRNA_intronic
CAediting_448552chr5_173075971_+ncRNA_intronic
CAediting_448553chr5_173075988_+ncRNA_intronic
CAediting_448554chr5_173075992_+ncRNA_intronic
CAediting_448555chr5_173076042_+ncRNA_intronic
CAediting_448556chr5_173076495_+ncRNA_intronic
CAediting_448557chr5_173076496_+ncRNA_intronic
CAediting_448558chr5_173076501_+ncRNA_intronic
CAediting_448559chr5_173076509_+ncRNA_intronic
CAediting_448560chr5_173076517_+ncRNA_intronic
CAediting_448561chr5_173076518_+ncRNA_intronic
CAediting_448562chr5_173076541_+ncRNA_intronic
CAediting_448563chr5_173076555_+ncRNA_intronic
CAediting_448564chr5_173076564_+ncRNA_intronic
CAediting_448565chr5_173076565_+ncRNA_intronic
CAediting_448566chr5_173076574_+ncRNA_intronic
CAediting_448567chr5_173076575_+ncRNA_intronic
CAediting_448568chr5_173076586_+ncRNA_intronic
CAediting_448569chr5_173076589_+ncRNA_intronic
CAediting_448570chr5_173076590_+ncRNA_intronic
CAediting_448571chr5_173076591_+ncRNA_intronic
CAediting_448572chr5_173076592_+ncRNA_intronic
CAediting_448573chr5_173076593_+ncRNA_intronic
CAediting_448574chr5_173076595_+ncRNA_intronic
CAediting_448575chr5_173076598_+ncRNA_intronic
CAediting_448576chr5_173076603_+ncRNA_intronic
CAediting_448577chr5_173076606_+ncRNA_intronic
CAediting_448578chr5_173076610_+ncRNA_intronic
CAediting_448579chr5_173076635_+ncRNA_intronic
CAediting_448580chr5_173076636_+ncRNA_intronic
CAediting_448581chr5_173076649_+ncRNA_intronic
CAediting_448582chr5_173076658_+ncRNA_intronic
CAediting_448583chr5_173076697_+ncRNA_intronic
CAediting_448584chr5_173076701_+ncRNA_intronic
CAediting_448585chr5_173076713_+ncRNA_intronic
CAediting_448586chr5_173077005_+ncRNA_intronic
CAediting_448587chr5_173077018_+ncRNA_intronic
CAediting_448588chr5_173077044_+ncRNA_intronic
CAediting_448589chr5_173077213_+ncRNA_intronic
CAediting_448590chr5_173077472_+ncRNA_intronic
CAediting_448591chr5_173077486_+ncRNA_intronic
CAediting_448592chr5_173077493_+ncRNA_intronic
CAediting_448593chr5_173077576_+ncRNA_intronic
CAediting_448594chr5_173077582_+ncRNA_intronic
CAediting_448595chr5_173077590_+ncRNA_intronic
CAediting_448596chr5_173077668_+ncRNA_intronic
CAediting_448597chr5_173079342_+ncRNA_intronic
CAediting_448598chr5_173079343_+ncRNA_intronic
CAediting_448599chr5_173079384_+ncRNA_intronic
CAediting_448600chr5_173079388_+ncRNA_intronic
CAediting_448601chr5_173079412_+ncRNA_intronic
CAediting_448602chr5_173081651_+ncRNA_intronic
CAediting_448603chr5_173081734_+ncRNA_intronic
CAediting_448604chr5_173081742_+ncRNA_intronic
CAediting_448605chr5_173081793_+ncRNA_intronic
CAediting_448606chr5_173081799_+ncRNA_intronic
CAediting_448607chr5_173081800_+ncRNA_intronic
CAediting_448608chr5_173081888_+ncRNA_intronic
CAediting_448609chr5_173081891_+ncRNA_intronic
CAediting_448610chr5_173081892_+ncRNA_intronic
CAediting_448611chr5_173082155_+ncRNA_intronic
CAediting_448612chr5_173082179_+ncRNA_intronic
CAediting_448613chr5_173082180_+ncRNA_intronic
CAediting_448614chr5_173082636_+ncRNA_intronic
CAediting_448615chr5_173082658_+ncRNA_intronic
CAediting_448616chr5_173082661_+ncRNA_intronic
CAediting_448617chr5_173082675_+ncRNA_intronic
CAediting_448618chr5_173082721_+ncRNA_intronic
CAediting_448619chr5_173082722_+ncRNA_intronic
CAediting_448620chr5_173082732_+ncRNA_intronic
CAediting_448621chr5_173082746_+ncRNA_intronic
CAediting_448622chr5_173082755_+ncRNA_intronic
CAediting_448623chr5_173082798_+ncRNA_intronic
CAediting_448624chr5_173082805_+ncRNA_intronic
CAediting_448625chr5_173082829_+ncRNA_intronic
CAediting_448626chr5_173082864_+ncRNA_intronic
CAediting_448627chr5_173082972_+ncRNA_intronic
CAediting_448628chr5_173083066_+ncRNA_intronic
CAediting_448629chr5_173083069_+ncRNA_intronic
CAediting_448630chr5_173083117_+ncRNA_intronic
CAediting_448631chr5_173083125_+ncRNA_intronic
CAediting_448632chr5_173083134_+ncRNA_intronic
CAediting_448633chr5_173083148_+ncRNA_intronic
CAediting_448634chr5_173083149_+ncRNA_intronic
CAediting_448635chr5_173084703_+ncRNA_intronic
CAediting_448636chr5_173084775_+ncRNA_intronic
CAediting_448637chr5_173087248_+ncRNA_intronic
CAediting_448638chr5_173088976_+ncRNA_intronic
CAediting_448639chr5_173088991_+ncRNA_intronic
CAediting_448640chr5_173089032_+ncRNA_intronic
CAediting_448641chr5_173089058_+ncRNA_intronic
CAediting_448642chr5_173089059_+ncRNA_intronic
CAediting_448643chr5_173089064_+ncRNA_intronic
CAediting_448644chr5_173089072_+ncRNA_intronic
CAediting_448645chr5_173089097_+ncRNA_intronic
CAediting_448646chr5_173089108_+ncRNA_intronic
CAediting_448647chr5_173089126_+ncRNA_intronic
CAediting_448648chr5_173091903_+ncRNA_intronic
CAediting_448649chr5_173107024_+ncRNA_intronic
CAediting_448650chr5_173112162_+ncRNA_intronic
CAediting_448651chr5_173117197_+ncRNA_intronic
CAediting_448652chr5_173117217_+ncRNA_intronic
CAediting_448653chr5_173117259_+ncRNA_intronic
CAediting_448654chr5_173118988_+ncRNA_intronic
CAediting_448655chr5_173124407_+ncRNA_exonic
CAediting_448656chr5_173124427_+ncRNA_exonic
CAediting_448657chr5_173124437_+ncRNA_exonic
CAediting_448658chr5_173124438_+ncRNA_exonic
CAediting_448659chr5_173124478_+ncRNA_exonic
CAediting_448660chr5_173124499_+ncRNA_exonic
CAediting_448661chr5_173124509_+ncRNA_exonic
CAediting_448662chr5_173124510_+ncRNA_exonic
CAediting_448663chr5_173124515_+ncRNA_exonic
CAediting_448664chr5_173125949_+intronic
CAediting_448665chr5_173126932_+intronic
CAediting_448666chr5_173126937_+intronic
CAediting_448667chr5_173127508_+intronic
CAediting_448668chr5_173129450_+intronic
CAediting_448669chr5_173129460_+intronic
CAediting_448670chr5_173129464_+intronic
CAediting_448671chr5_173129473_+intronic
CAediting_448672chr5_173129488_+intronic
CAediting_448673chr5_173129489_+intronic
CAediting_448674chr5_173129493_+intronic
CAediting_448675chr5_173129513_+intronic
CAediting_448676chr5_173129536_+intronic
CAediting_448677chr5_173129541_+intronic
CAediting_448678chr5_173129551_+intronic
CAediting_448679chr5_173129557_+intronic
CAediting_448680chr5_173129563_+intronic
CAediting_448681chr5_173129564_+intronic
CAediting_448682chr5_173129565_+intronic
CAediting_448683chr5_173129566_+intronic
CAediting_448684chr5_173129568_+intronic
CAediting_448685chr5_173129573_+intronic
CAediting_448686chr5_173129574_+intronic
CAediting_448687chr5_173129578_+intronic
CAediting_448688chr5_173129582_+intronic
CAediting_448689chr5_173129586_+intronic
CAediting_448690chr5_173129604_+intronic
CAediting_448691chr5_173129605_+intronic
CAediting_448692chr5_173129618_+intronic
CAediting_448693chr5_173129621_+intronic
CAediting_448694chr5_173129627_+intronic
CAediting_448695chr5_173129632_+intronic
CAediting_448696chr5_173129634_+intronic
CAediting_448697chr5_173129650_+intronic
CAediting_448698chr5_173129670_+intronic
CAediting_448699chr5_173129674_+intronic
CAediting_448700chr5_173129675_+intronic
CAediting_448701chr5_173129926_+intronic
CAediting_448702chr5_173130594_+intronic
CAediting_448703chr5_173130604_+intronic
CAediting_448704chr5_173130657_+intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_448523chr5_173060330_+SINEAluAluSz
CAediting_448524chr5_173060397_+SINEAluAluSz
CAediting_448525chr5_173060420_+SINEAluAluSz
CAediting_448526chr5_173060421_+SINEAluAluSz
CAediting_448527chr5_173060431_+SINEAluAluSz
CAediting_448528chr5_173060432_+SINEAluAluSz
CAediting_448529chr5_173060459_+SINEAluAluSz
CAediting_448530chr5_173060511_+SINEAluAluSz
CAediting_448531chr5_173067742_+SINEAluAluY
CAediting_448532chr5_173068813_+SINEAluAluSx
CAediting_448533chr5_173068814_+SINEAluAluSx
CAediting_448534chr5_173068859_+SINEAluAluSx
CAediting_448535chr5_173068870_+SINEAluAluSx
CAediting_448536chr5_173068951_+SINEAluAluSx
CAediting_448537chr5_173068961_+SINEAluAluSx
CAediting_448538chr5_173069363_+SINEAluAluSz
CAediting_448539chr5_173069365_+SINEAluAluSz
CAediting_448540chr5_173069436_+SINEAluAluSz
CAediting_448541chr5_173069995_+SINEAluAluSz
CAediting_448542chr5_173070024_+SINEAluAluSz
CAediting_448543chr5_173070034_+SINEAluAluSz
CAediting_448544chr5_173070093_+SINEAluAluSz
CAediting_448545chr5_173070140_+SINEAluAluSz
CAediting_448546chr5_173072237_+SINEAluAluJr
CAediting_448547chr5_173072241_+SINEAluAluJr
CAediting_448548chr5_173072638_+SINEAluAluJr
CAediting_448549chr5_173072649_+SINEAluAluJr
CAediting_448550chr5_173074047_+SINEAluAluSq2
CAediting_448551chr5_173074155_+SINEAluAluSq2
CAediting_448552chr5_173075971_+SINEAluFLAM_C
CAediting_448553chr5_173075988_+SINEAluFLAM_C
CAediting_448554chr5_173075992_+SINEAluFLAM_C
CAediting_448555chr5_173076042_+SINEAluFLAM_C
CAediting_448556chr5_173076495_+SINEAluAluSx
CAediting_448557chr5_173076496_+SINEAluAluSx
CAediting_448558chr5_173076501_+SINEAluAluSx
CAediting_448559chr5_173076509_+SINEAluAluSx
CAediting_448560chr5_173076517_+SINEAluAluSx
CAediting_448561chr5_173076518_+SINEAluAluSx
CAediting_448562chr5_173076541_+SINEAluAluSx
CAediting_448563chr5_173076555_+SINEAluAluSx
CAediting_448564chr5_173076564_+SINEAluAluSx
CAediting_448565chr5_173076565_+SINEAluAluSx
CAediting_448566chr5_173076574_+SINEAluAluSx
CAediting_448567chr5_173076575_+SINEAluAluSx
CAediting_448568chr5_173076586_+SINEAluAluSx
CAediting_448569chr5_173076589_+SINEAluAluSx
CAediting_448570chr5_173076590_+SINEAluAluSx
CAediting_448571chr5_173076591_+SINEAluAluSx
CAediting_448572chr5_173076592_+SINEAluAluSx
CAediting_448573chr5_173076593_+SINEAluAluSx
CAediting_448574chr5_173076595_+SINEAluAluSx
CAediting_448575chr5_173076598_+SINEAluAluSx
CAediting_448576chr5_173076603_+SINEAluAluSx
CAediting_448577chr5_173076606_+SINEAluAluSx
CAediting_448578chr5_173076610_+SINEAluAluSx
CAediting_448579chr5_173076635_+SINEAluAluSx
CAediting_448580chr5_173076636_+SINEAluAluSx
CAediting_448581chr5_173076649_+SINEAluAluSx
CAediting_448582chr5_173076658_+SINEAluAluSx
CAediting_448583chr5_173076697_+SINEAluAluSx
CAediting_448584chr5_173076701_+SINEAluAluSx
CAediting_448585chr5_173076713_+SINEAluAluSx
CAediting_448586chr5_173077005_+SINEAluAluSx3
CAediting_448587chr5_173077018_+SINEAluAluSx3
CAediting_448588chr5_173077044_+SINEAluAluSx3
CAediting_448589chr5_173077213_+SINEAluAluSx3
CAediting_448590chr5_173077472_+SINEAluAluSz
CAediting_448591chr5_173077486_+SINEAluAluSz
CAediting_448592chr5_173077493_+SINEAluAluSz
CAediting_448593chr5_173077576_+SINEAluAluSz
CAediting_448594chr5_173077582_+SINEAluAluSz
CAediting_448595chr5_173077590_+SINEAluAluSz
CAediting_448596chr5_173077668_+SINEAluAluSz
CAediting_448597chr5_173079342_+SINEAluAluSx
CAediting_448598chr5_173079343_+SINEAluAluSx
CAediting_448599chr5_173079384_+SINEAluAluSx
CAediting_448600chr5_173079388_+SINEAluAluSx
CAediting_448601chr5_173079412_+SINEAluAluSx
CAediting_448602chr5_173081651_+SINEAluAluSg
CAediting_448603chr5_173081734_+SINEAluAluSg
CAediting_448604chr5_173081742_+SINEAluAluSg
CAediting_448605chr5_173081793_+SINEAluAluSg
CAediting_448606chr5_173081799_+SINEAluAluSg
CAediting_448607chr5_173081800_+SINEAluAluSg
CAediting_448608chr5_173081888_+SINEAluAluSg
CAediting_448609chr5_173081891_+SINEAluAluSg
CAediting_448610chr5_173081892_+SINEAluAluSg
CAediting_448611chr5_173082155_+SINEAluAluY
CAediting_448612chr5_173082179_+SINEAluAluY
CAediting_448613chr5_173082180_+SINEAluAluY
CAediting_448614chr5_173082636_+SINEAluAluSz
CAediting_448615chr5_173082658_+SINEAluAluSz
CAediting_448616chr5_173082661_+SINEAluAluSz
CAediting_448617chr5_173082675_+SINEAluAluSz
CAediting_448618chr5_173082721_+SINEAluAluSz
CAediting_448619chr5_173082722_+SINEAluAluSz
CAediting_448620chr5_173082732_+SINEAluAluSz
CAediting_448621chr5_173082746_+SINEAluAluSz
CAediting_448622chr5_173082755_+SINEAluAluSz
CAediting_448623chr5_173082798_+SINEAluAluSz
CAediting_448624chr5_173082805_+SINEAluAluSz
CAediting_448625chr5_173082829_+SINEAluAluSz
CAediting_448626chr5_173082864_+SINEAluAluSz
CAediting_448627chr5_173082972_+SINEAluAluSz
CAediting_448628chr5_173083066_+SINEAluAluSz
CAediting_448629chr5_173083069_+SINEAluAluSz
CAediting_448630chr5_173083117_+SINEAluAluSz
CAediting_448631chr5_173083125_+SINEAluAluSz
CAediting_448632chr5_173083134_+SINEAluAluSz
CAediting_448633chr5_173083148_+SINEAluAluSz
CAediting_448634chr5_173083149_+SINEAluAluSz
CAediting_448635chr5_173084703_+SINEAluAluY
CAediting_448636chr5_173084775_+SINEAluAluY
CAediting_448637chr5_173087248_+SINEAluAluSx
CAediting_448638chr5_173088976_+SINEAluAluSg7
CAediting_448639chr5_173088991_+SINEAluAluSg7
CAediting_448640chr5_173089032_+SINEAluAluSg7
CAediting_448641chr5_173089058_+SINEAluAluSg7
CAediting_448642chr5_173089059_+SINEAluAluSg7
CAediting_448643chr5_173089064_+SINEAluAluSg7
CAediting_448644chr5_173089072_+SINEAluAluSg7
CAediting_448645chr5_173089097_+SINEAluAluSg7
CAediting_448646chr5_173089108_+SINEAluAluSg7
CAediting_448647chr5_173089126_+SINEAluAluSg7
CAediting_448648chr5_173091903_+SINEAluAluSp
CAediting_448649chr5_173107024_+SINEAluAluSq2
CAediting_448650chr5_173112162_+SINEAluAluJr
CAediting_448651chr5_173117197_+SINEAluAluSq2
CAediting_448652chr5_173117217_+SINEAluAluSq2
CAediting_448653chr5_173117259_+SINEAluAluSq2
CAediting_448654chr5_173118988_+SINEAluAluJo
CAediting_448655chr5_173124407_+SINEAluAluSx1
CAediting_448656chr5_173124427_+SINEAluAluSx1
CAediting_448657chr5_173124437_+SINEAluAluSx1
CAediting_448658chr5_173124438_+SINEAluAluSx1
CAediting_448659chr5_173124478_+SINEAluAluSx1
CAediting_448660chr5_173124499_+SINEAluAluSx1
CAediting_448661chr5_173124509_+SINEAluAluSx1
CAediting_448662chr5_173124510_+SINEAluAluSx1
CAediting_448663chr5_173124515_+SINEAluAluSx1
CAediting_448664chr5_173125949_+SINEAluFLAM_A
CAediting_448665chr5_173126932_+SINEAluAluJb
CAediting_448666chr5_173126937_+SINEAluAluJb
CAediting_448667chr5_173127508_+SINEAluAluSg4
CAediting_448668chr5_173129450_+SINEAluAluJo
CAediting_448669chr5_173129460_+SINEAluAluJo
CAediting_448670chr5_173129464_+SINEAluAluJo
CAediting_448671chr5_173129473_+SINEAluAluJo
CAediting_448672chr5_173129488_+SINEAluAluJo
CAediting_448673chr5_173129489_+SINEAluAluJo
CAediting_448674chr5_173129493_+SINEAluAluJo
CAediting_448675chr5_173129513_+SINEAluAluJo
CAediting_448676chr5_173129536_+SINEAluAluJo
CAediting_448677chr5_173129541_+SINEAluAluJo
CAediting_448678chr5_173129551_+SINEAluAluJo
CAediting_448679chr5_173129557_+SINEAluAluJo
CAediting_448680chr5_173129563_+SINEAluAluJo
CAediting_448681chr5_173129564_+SINEAluAluJo
CAediting_448682chr5_173129565_+SINEAluAluJo
CAediting_448683chr5_173129566_+SINEAluAluJo
CAediting_448684chr5_173129568_+SINEAluAluJo
CAediting_448685chr5_173129573_+SINEAluAluJo
CAediting_448686chr5_173129574_+SINEAluAluJo
CAediting_448687chr5_173129578_+SINEAluAluJo
CAediting_448688chr5_173129582_+SINEAluAluJo
CAediting_448689chr5_173129586_+SINEAluAluJo
CAediting_448690chr5_173129604_+SINEAluAluJo
CAediting_448691chr5_173129605_+SINEAluAluJo
CAediting_448692chr5_173129618_+SINEAluAluJo
CAediting_448693chr5_173129621_+SINEAluAluJo
CAediting_448694chr5_173129627_+SINEAluAluJo
CAediting_448695chr5_173129632_+SINEAluAluJo
CAediting_448696chr5_173129634_+SINEAluAluJo
CAediting_448697chr5_173129650_+SINEAluAluJo
CAediting_448698chr5_173129670_+SINEAluAluJo
CAediting_448699chr5_173129674_+SINEAluAluJo
CAediting_448700chr5_173129675_+SINEAluAluJo
CAediting_448701chr5_173129926_+SINEAluAluSg
CAediting_448702chr5_173130594_+SINEAluAluJo
CAediting_448703chr5_173130604_+SINEAluAluJo
CAediting_448704chr5_173130657_+SINEAluAluJo

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RNA A-to-I editing events in the alternative splicing sites for CREBRF

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000164463.11.CREBRF.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000164463.11.CREBRF.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for CREBRF

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for CREBRF

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for CREBRF

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_980496chr14_31014685_-ENSG00000164463.11ENST00000522692hsa-miR-624-3p1730919081730919147mer-m8173091895173091915152-14.27
CAediting_393chr1_1167164_+ENSG00000164463.11ENST00000296953hsa-miR-200b-3p1731354121731354198mer-1a173135398173135419167-20.87
CAediting_393chr1_1167164_+ENSG00000164463.11ENST00000296953hsa-miR-200b-3p1731338311731338377mer-1a173133817173133837144-17.99
CAediting_1351755chr19_40282625_-ENSG00000164463.11ENST00000522692hsa-miR-6411730921271730921326mer173092109173092133143-17.24
CAediting_77128chr1_85133844_+ENSG00000164463.11ENST00000522692hsa-miR-4423-3p1730916821730916887mer-m8173091671173091689143-16.47
CAediting_1229413chr17_67471544_+ENSG00000164463.11ENST00000296953hsa-miR-548aa1731373231731373308mer-1a173137308173137330151-10.8
CAediting_1229413chr17_67471544_+ENSG00000164463.11ENST00000296953hsa-miR-548aa1731380211731380277mer-1a173138005173138027140-16.92
CAediting_1229414chr17_67471546_+ENSG00000164463.11ENST00000296953hsa-miR-548aa1731362131731362197mer-m8173136193173136220154-12.31
CAediting_1229414chr17_67471546_+ENSG00000164463.11ENST00000296953hsa-miR-548aa1731373831731373897mer-m8173137362173137390152-18.38
CAediting_1229415chr17_67471547_+ENSG00000164463.11ENST00000296953hsa-miR-548aa1731371831731371908mer-1a173137165173137190161-15.93
CAediting_1399425chr20_1392958_-ENSG00000164463.11ENST00000296953hsa-miR-6869-5p1731356021731356076mer173135587173135608141-21.72
CAediting_228905chr2_188297554_+ENSG00000164463.11ENST00000296953hsa-miR-561-3p1731343601731343678mer-1a173134342173134367142-13.39
CAediting_396018chr5_1062918_-ENSG00000164463.11ENST00000296953hsa-miR-46351731368961731369027mer-m8173136885173136903152-18.27
CAediting_524911chr7_5495852_-ENSG00000164463.11ENST00000296953hsa-miR-589-3p1731361491731361557mer-m8173136133173136156140-13.39
CAediting_524911chr7_5495852_-ENSG00000164463.11ENST00000296953hsa-miR-589-3p1731340761731340838mer-1a173134060173134083150-20.07

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_442554chr5_154685830_+ENSG00000164463.11ENST00000296953hsa-miR-13031731368041731368118mer-1a173136794173136811142-16.05
CAediting_846604chr11_93733708_-ENSG00000164463.11ENST00000296953hsa-miR-1304-3p1731384861731384916mer173138471173138492150-21.17
CAediting_117844chr1_162342605_+ENSG00000164463.11ENST00000296953hsa-miR-556-3p1731343731731343797mer-m8173134356173134380148-12.89
CAediting_524911chr7_5495852_-ENSG00000164463.11ENST00000296953hsa-miR-589-3p1731367461731367527mer-m8173136731173136753148-11.46

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for CREBRF

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.
ENST00000517882.1processed_transcriptSoverviewSoverview
ENST00000520464.1retained_intronSoverviewSoverview
ENST00000522692.4protein_codingSoverviewSoverview

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI
CAediting_448523ENST00000517882.1chr5_173060330_+-217.80-218.10-226.70
CAediting_448524ENST00000517882.1chr5_173060397_+-219.40-218.10-226.70
CAediting_448525ENST00000517882.1chr5_173060420_+-218.00-218.10-226.70
CAediting_448526ENST00000517882.1chr5_173060421_+-220.90-218.10-226.70
CAediting_448527ENST00000517882.1chr5_173060431_+-219.40-218.10-226.70
CAediting_448528ENST00000517882.1chr5_173060432_+-219.30-218.10-226.70
CAediting_448655ENST00000520464.1chr5_173124407_+-1407.60-1407.50-1415.70
CAediting_448656ENST00000520464.1chr5_173124427_+-1406.70-1407.50-1415.70
CAediting_448657ENST00000520464.1chr5_173124437_+-1407.50-1407.50-1415.70
CAediting_448658ENST00000520464.1chr5_173124438_+-1407.50-1407.50-1415.70
CAediting_448659ENST00000520464.1chr5_173124478_+-1407.50-1407.50-1415.70
CAediting_448660ENST00000520464.1chr5_173124499_+-1410.30-1407.50-1415.70
CAediting_448661ENST00000520464.1chr5_173124509_+-1407.40-1407.50-1415.70
CAediting_448662ENST00000520464.1chr5_173124510_+-1407.90-1407.50-1415.70
CAediting_448663ENST00000520464.1chr5_173124515_+-1409.90-1407.50-1415.70
CAediting_448648ENST00000522692.4chr5_173091903_+-664.00-663.90-664.00

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Relation with ADAR for CREBRF

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)

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Relation with cancer stages for CREBRF

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

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Relation with survival for CREBRF

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for CREBRF

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for CREBRF

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource