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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: DTX3L (CAeditome ID:151636)

Gene summary for DTX3L

check button Gene summary
Gene informationGene symbol

DTX3L

Gene ID

151636

Gene namedeltex E3 ubiquitin ligase 3L
SynonymsBBAP|RNF143
Cytomap

3q21.1

Type of geneprotein-coding
DescriptionE3 ubiquitin-protein ligase DTX3LB-lymphoma- and BAL-associated proteinRING-type E3 ubiquitin transferase DTX3Ldeltex 3 like, E3 ubiquitin ligasedeltex 3-likerhysin-2rhysin2
Modification date20210518
UniProtAcc

Q8TDB6

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
DTX3L

GO:0005634

E3 ubiquitin-protein ligase DTX3L

26479788

DTX3L

GO:0005769

E3 ubiquitin-protein ligase DTX3L

24790097

DTX3L

GO:0004842

E3 ubiquitin-protein ligase DTX3L

19818714

DTX3L

GO:0004842

E3 ubiquitin-protein ligase DTX3L

28525742

DTX3L

GO:0008047

E3 ubiquitin-protein ligase DTX3L

28525742

DTX3L

GO:0042393

E3 ubiquitin-protein ligase DTX3L

19818714

DTX3L

GO:0010390

E3 ubiquitin-protein ligase DTX3L

19818714

DTX3L

GO:0010390

E3 ubiquitin-protein ligase DTX3L

28525742

DTX3L

GO:0070936

E3 ubiquitin-protein ligase DTX3L

26479788

DTX3L

GO:1901666

E3 ubiquitin-protein ligase DTX3L

28525742

DTX3L

GO:0005634

E3 ubiquitin-protein ligase DTX3L

16809771

DTX3L

GO:0005654

E3 ubiquitin-protein ligase DTX3L

0000052

DTX3L

GO:0005737

E3 ubiquitin-protein ligase DTX3L

16809771

DTX3L

GO:0005737

E3 ubiquitin-protein ligase DTX3L

24790097

DTX3L

GO:0005737

E3 ubiquitin-protein ligase DTX3L

26479788

DTX3L

GO:0005764

E3 ubiquitin-protein ligase DTX3L

24790097

DTX3L

GO:0005829

E3 ubiquitin-protein ligase DTX3L

0000052

DTX3L

GO:0032991

E3 ubiquitin-protein ligase DTX3L

24790097

DTX3L

GO:0032991

E3 ubiquitin-protein ligase DTX3L

26479788


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RNA A-to-I events for DTX3L

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000163840.8
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_303738(122565292, +), CAediting_303739(122565326, +), CAediting_303740(122565385, +), CAediting_303741(122565392, +), CAediting_303742(122565397, +), CAediting_303743(122566390, +), CAediting_303744(122566417, +), CAediting_303745(122566420, +), CAediting_303746(122566479, +), CAediting_303747(122566484, +), CAediting_303748(122566496, +), CAediting_303749(122566500, +), CAediting_303750(122566508, +), CAediting_303751(122570846, +), CAediting_303752(122570862, +), CAediting_303753(122570868, +), CAediting_303754(122570876, +), CAediting_303755(122570880, +), CAediting_303756(122570881, +), CAediting_303757(122570892, +), CAediting_303758(122570893, +), CAediting_303759(122570894, +), CAediting_303760(122570897, +), CAediting_303761(122570899, +), CAediting_303762(122570912, +), CAediting_303763(122570922, +), CAediting_303764(122570925, +), CAediting_303765(122570933, +), CAediting_303766(122570942, +), CAediting_303767(122570943, +), CAediting_303768(122571337, +), CAediting_303769(122571351, +), CAediting_303770(122571352, +), CAediting_303771(122571353, +), CAediting_303772(122571356, +), CAediting_303773(122571357, +), CAediting_303774(122571358, +), CAediting_303775(122571362, +), CAediting_303776(122571369, +), CAediting_303777(122571376, +), CAediting_303778(122571389, +), CAediting_303779(122571390, +), CAediting_303780(122571391, +), CAediting_303781(122571406, +), CAediting_303782(122571422, +), CAediting_303783(122571424, +), CAediting_303784(122571435, +), CAediting_303785(122571437, +), CAediting_303786(122571494, +), CAediting_303787(122571507, +), CAediting_303788(122571964, +), CAediting_303789(122571983, +), CAediting_303790(122571988, +), CAediting_303791(122571989, +), CAediting_303792(122572021, +), CAediting_303793(122572026, +), CAediting_303794(122572038, +), CAediting_303795(122572048, +), CAediting_303796(122572098, +), CAediting_303797(122572120, +), CAediting_303798(122572174, +), CAediting_303799(122572175, +), CAediting_303800(122572187, +), CAediting_303801(122572597, +), CAediting_303802(122572609, +), CAediting_303803(122572629, +), CAediting_303804(122572707, +), CAediting_303805(122572717, +), CAediting_303806(122572719, +), CAediting_303807(122572744, +), CAediting_303808(122572753, +), CAediting_303809(122572762, +), CAediting_303810(122572788, +), CAediting_303811(122572849, +), CAediting_303812(122573487, +), CAediting_303813(122573495, +), CAediting_303814(122573522, +), CAediting_303815(122573523, +), CAediting_303816(122573861, +), CAediting_303817(122573869, +), CAediting_303818(122573888, +), CAediting_303819(122573923, +), CAediting_303820(122573924, +), CAediting_303821(122573964, +), CAediting_303822(122574059, +),

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RNA editing positional annotations for DTX3L using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_303738chr3_122565292_+intronic
CAediting_303739chr3_122565326_+intronic
CAediting_303740chr3_122565385_+intronic
CAediting_303741chr3_122565392_+intronic
CAediting_303742chr3_122565397_+intronic
CAediting_303743chr3_122566390_+intronic
CAediting_303744chr3_122566417_+intronic
CAediting_303745chr3_122566420_+intronic
CAediting_303746chr3_122566479_+intronic
CAediting_303747chr3_122566484_+intronic
CAediting_303748chr3_122566496_+intronic
CAediting_303749chr3_122566500_+intronic
CAediting_303750chr3_122566508_+intronic
CAediting_303751chr3_122570846_+intronic
CAediting_303752chr3_122570862_+intronic
CAediting_303753chr3_122570868_+intronic
CAediting_303754chr3_122570876_+intronic
CAediting_303755chr3_122570880_+intronic
CAediting_303756chr3_122570881_+intronic
CAediting_303757chr3_122570892_+intronic
CAediting_303758chr3_122570893_+intronic
CAediting_303759chr3_122570894_+intronic
CAediting_303760chr3_122570897_+intronic
CAediting_303761chr3_122570899_+intronic
CAediting_303762chr3_122570912_+intronic
CAediting_303763chr3_122570922_+intronic
CAediting_303764chr3_122570925_+intronic
CAediting_303765chr3_122570933_+intronic
CAediting_303766chr3_122570942_+intronic
CAediting_303767chr3_122570943_+intronic
CAediting_303768chr3_122571337_+intronic
CAediting_303769chr3_122571351_+intronic
CAediting_303770chr3_122571352_+intronic
CAediting_303771chr3_122571353_+intronic
CAediting_303772chr3_122571356_+intronic
CAediting_303773chr3_122571357_+intronic
CAediting_303774chr3_122571358_+intronic
CAediting_303775chr3_122571362_+intronic
CAediting_303776chr3_122571369_+intronic
CAediting_303777chr3_122571376_+intronic
CAediting_303778chr3_122571389_+intronic
CAediting_303779chr3_122571390_+intronic
CAediting_303780chr3_122571391_+intronic
CAediting_303781chr3_122571406_+intronic
CAediting_303782chr3_122571422_+intronic
CAediting_303783chr3_122571424_+intronic
CAediting_303784chr3_122571435_+intronic
CAediting_303785chr3_122571437_+intronic
CAediting_303786chr3_122571494_+intronic
CAediting_303787chr3_122571507_+intronic
CAediting_303788chr3_122571964_+UTR3
CAediting_303789chr3_122571983_+UTR3
CAediting_303790chr3_122571988_+UTR3
CAediting_303791chr3_122571989_+UTR3
CAediting_303792chr3_122572021_+UTR3
CAediting_303793chr3_122572026_+UTR3
CAediting_303794chr3_122572038_+UTR3
CAediting_303795chr3_122572048_+UTR3
CAediting_303796chr3_122572098_+UTR3
CAediting_303797chr3_122572120_+UTR3
CAediting_303798chr3_122572174_+UTR3
CAediting_303799chr3_122572175_+UTR3
CAediting_303800chr3_122572187_+UTR3
CAediting_303801chr3_122572597_+UTR3
CAediting_303802chr3_122572609_+UTR3
CAediting_303803chr3_122572629_+UTR3
CAediting_303804chr3_122572707_+UTR3
CAediting_303805chr3_122572717_+UTR3
CAediting_303806chr3_122572719_+UTR3
CAediting_303807chr3_122572744_+UTR3
CAediting_303808chr3_122572753_+UTR3
CAediting_303809chr3_122572762_+UTR3
CAediting_303810chr3_122572788_+UTR3
CAediting_303811chr3_122572849_+UTR3
CAediting_303812chr3_122573487_+UTR3
CAediting_303813chr3_122573495_+UTR3
CAediting_303814chr3_122573522_+UTR3
CAediting_303815chr3_122573523_+UTR3
CAediting_303816chr3_122573861_+UTR3
CAediting_303817chr3_122573869_+UTR3
CAediting_303818chr3_122573888_+UTR3
CAediting_303819chr3_122573923_+UTR3
CAediting_303820chr3_122573924_+UTR3
CAediting_303821chr3_122573964_+UTR3
CAediting_303822chr3_122574059_+UTR3

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_303738chr3_122565292_+SINEAluAluSx
CAediting_303739chr3_122565326_+SINEAluAluSx
CAediting_303740chr3_122565385_+SINEAluAluSx
CAediting_303741chr3_122565392_+SINEAluAluSx
CAediting_303742chr3_122565397_+SINEAluAluSx
CAediting_303743chr3_122566390_+SINEAluAluJo
CAediting_303744chr3_122566417_+SINEAluAluJo
CAediting_303745chr3_122566420_+SINEAluAluJo
CAediting_303746chr3_122566479_+SINEAluAluJo
CAediting_303747chr3_122566484_+SINEAluAluJo
CAediting_303748chr3_122566496_+SINEAluAluJo
CAediting_303749chr3_122566500_+SINEAluAluJo
CAediting_303750chr3_122566508_+SINEAluAluJo
CAediting_303786chr3_122571494_+DNATcMar-TiggerTigger12c
CAediting_303787chr3_122571507_+DNATcMar-TiggerTigger12c
CAediting_303788chr3_122571964_+SINEAluAluY
CAediting_303789chr3_122571983_+SINEAluAluY
CAediting_303790chr3_122571988_+SINEAluAluY
CAediting_303791chr3_122571989_+SINEAluAluY
CAediting_303792chr3_122572021_+SINEAluAluY
CAediting_303793chr3_122572026_+SINEAluAluY
CAediting_303794chr3_122572038_+SINEAluAluY
CAediting_303795chr3_122572048_+SINEAluAluY
CAediting_303796chr3_122572098_+SINEAluAluY
CAediting_303797chr3_122572120_+SINEAluAluY
CAediting_303798chr3_122572174_+SINEAluAluY
CAediting_303799chr3_122572175_+SINEAluAluY
CAediting_303800chr3_122572187_+SINEAluAluY
CAediting_303801chr3_122572597_+SINEAluAluSz
CAediting_303802chr3_122572609_+SINEAluAluSz
CAediting_303803chr3_122572629_+SINEAluAluSz
CAediting_303804chr3_122572707_+SINEAluAluSz
CAediting_303805chr3_122572717_+SINEAluAluSz
CAediting_303806chr3_122572719_+SINEAluAluSz
CAediting_303807chr3_122572744_+SINEAluAluSz
CAediting_303808chr3_122572753_+SINEAluAluSz
CAediting_303809chr3_122572762_+SINEAluAluSz
CAediting_303810chr3_122572788_+SINEAluAluSz
CAediting_303811chr3_122572849_+SINEAluAluSz
CAediting_303816chr3_122573861_+SINEAluAluJb
CAediting_303817chr3_122573869_+SINEAluAluJb
CAediting_303818chr3_122573888_+SINEAluAluJb
CAediting_303819chr3_122573923_+SINEAluAluJb
CAediting_303820chr3_122573924_+SINEAluAluJb
CAediting_303821chr3_122573964_+SINEAluAluJb
CAediting_303822chr3_122574059_+SINEAluAluJb

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RNA A-to-I editing events in the alternative splicing sites for DTX3L

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000163840.8.DTX3L.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000163840.8.DTX3L.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for DTX3L

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.
BRCA.CAediting_303784.ENSG00000163840.DTX3L.png
Soverview

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Protein coding region RNA A-to-I editings for DTX3L

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for DTX3L

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_303798chr3_122572174_+ENSG00000163840.8ENST00000296161hsa-miR-12991225721681225721747mer-m8122572155122572175154.00-23.20
CAediting_303798chr3_122572174_+ENSG00000163840.8ENST00000296161hsa-miR-514a-5p1225721701225721767mer-m8122572154122572177154.00-18.63
CAediting_303798chr3_122572174_+ENSG00000163840.8ENST00000296161hsa-miR-514a-5p1225721701225721767mer-m8122572154122572177154.00-18.63
CAediting_303798chr3_122572174_+ENSG00000163840.8ENST00000296161hsa-miR-514a-5p1225721701225721767mer-m8122572154122572177154.00-18.63
CAediting_303798chr3_122572174_+ENSG00000163840.8ENST00000296161hsa-miR-518c-5p1225721691225721757mer-m8122572154122572176151.00-20.46
CAediting_303799chr3_122572175_+ENSG00000163840.8ENST00000296161hsa-miR-6813-3p1225721701225721767mer-m8122572157122572177140.00-11.15
CAediting_303812chr3_122573487_+ENSG00000163840.8ENST00000296161hsa-miR-513c-5p1225734831225734897mer-m8122573468122573490146.00-14.99
CAediting_303812chr3_122573487_+ENSG00000163840.8ENST00000296161hsa-miR-514b-5p1225734831225734897mer-m8122573468122573490166.00-22.09
CAediting_303791chr3_122571989_+ENSG00000163840.8ENST00000296161hsa-miR-17-3p1225719821225719887mer-m8122571968122571989150.00-16.23
CAediting_303791chr3_122571989_+ENSG00000163840.8ENST00000296161hsa-miR-5961225719851225719917mer-m8122571972122571992140.00-18.43
CAediting_303792chr3_122572021_+ENSG00000163840.8ENST00000296161hsa-miR-18271225720181225720258mer-1a122572008122572025159.00-19.12
CAediting_303792chr3_122572021_+ENSG00000163840.8ENST00000296161hsa-miR-4722-5p1225720151225720217mer-m8122571996122572022154.00-27.12
CAediting_303792chr3_122572021_+ENSG00000163840.8ENST00000296161hsa-miR-4763-3p1225720171225720226mer122572000122572023142.00-25.57
CAediting_303792chr3_122572021_+ENSG00000163840.8ENST00000296161hsa-miR-4768-3p1225720141225720207mer-m8122572002122572021140.00-13.40
CAediting_303792chr3_122572021_+ENSG00000163840.8ENST00000296161hsa-miR-6765-5p1225720201225720256mer122572005122572026147.00-25.76
CAediting_303792chr3_122572021_+ENSG00000163840.8ENST00000296161hsa-miR-6808-5p1225720171225720237mer-m8122572003122572024157.00-24.64
CAediting_303792chr3_122572021_+ENSG00000163840.8ENST00000296161hsa-miR-6893-5p1225720171225720237mer-m8122572003122572024154.00-22.49
CAediting_303792chr3_122572021_+ENSG00000163840.8ENST00000296161hsa-miR-9401225720171225720237mer-m8122572004122572024141.00-14.36
CAediting_303794chr3_122572038_+ENSG00000163840.8ENST00000296161hsa-miR-4691-3p1225720351225720417mer-m8122572016122572042152.00-28.24
CAediting_303795chr3_122572048_+ENSG00000163840.8ENST00000296161hsa-miR-17-3p1225720441225720507mer-m8122572029122572051154.00-20.36
CAediting_303797chr3_122572120_+ENSG00000163840.8ENST00000296161hsa-miR-3190-5p1225721181225721247mer-m8122572107122572125148.00-20.60
CAediting_303797chr3_122572120_+ENSG00000163840.8ENST00000296161hsa-miR-548s1225721171225721237mer-m8122572100122572124151.00-16.53
CAediting_303801chr3_122572597_+ENSG00000163840.8ENST00000296161hsa-miR-4733-5p1225725931225725997mer-m8122572578122572600145.00-9.42
CAediting_303803chr3_122572629_+ENSG00000163840.8ENST00000296161hsa-miR-4793-3p1225726271225726337mer-m8122572612122572634157.00-22.82
CAediting_303803chr3_122572629_+ENSG00000163840.8ENST00000296161hsa-miR-508-5p1225726231225726297mer-m8122572608122572630150.00-20.08
CAediting_303803chr3_122572629_+ENSG00000163840.8ENST00000296161hsa-miR-766-3p1225726221225726287mer-m8122572608122572629145.00-20.72
CAediting_303803chr3_122572629_+ENSG00000163840.8ENST00000296161hsa-miR-77031225726261225726327mer-m8122572611122572633162.00-25.89
CAediting_303807chr3_122572744_+ENSG00000163840.8ENST00000296161hsa-miR-548ae-3p1225727421225727487mer-m8122572729122572749141.00-6.23
CAediting_303807chr3_122572744_+ENSG00000163840.8ENST00000296161hsa-miR-548ae-3p1225727421225727487mer-m8122572729122572749141.00-6.23
CAediting_303807chr3_122572744_+ENSG00000163840.8ENST00000296161hsa-miR-548ah-3p1225727421225727487mer-m8122572727122572749143.00-6.35
CAediting_303807chr3_122572744_+ENSG00000163840.8ENST00000296161hsa-miR-548aj-3p1225727421225727487mer-m8122572729122572749141.00-7.13
CAediting_303807chr3_122572744_+ENSG00000163840.8ENST00000296161hsa-miR-548aj-3p1225727421225727487mer-m8122572729122572749141.00-7.13
CAediting_303807chr3_122572744_+ENSG00000163840.8ENST00000296161hsa-miR-548am-3p1225727421225727487mer-m8122572727122572749143.00-6.23
CAediting_303807chr3_122572744_+ENSG00000163840.8ENST00000296161hsa-miR-548aq-3p1225727421225727487mer-m8122572728122572749141.00-6.23
CAediting_303807chr3_122572744_+ENSG00000163840.8ENST00000296161hsa-miR-548j-3p1225727421225727487mer-m8122572729122572749141.00-6.23
CAediting_303807chr3_122572744_+ENSG00000163840.8ENST00000296161hsa-miR-548x-3p1225727421225727487mer-m8122572730122572749141.00-7.13
CAediting_303807chr3_122572744_+ENSG00000163840.8ENST00000296161hsa-miR-548x-3p1225727421225727487mer-m8122572730122572749141.00-7.13
CAediting_303807chr3_122572744_+ENSG00000163840.8ENST00000296161hsa-miR-7844-5p1225727401225727467mer-m8122572726122572747160.00-18.78
CAediting_303810chr3_122572788_+ENSG00000163840.8ENST00000296161hsa-miR-3940-3p1225727851225727917mer-m8122572774122572792144.00-24.53
CAediting_303815chr3_122573523_+ENSG00000163840.8ENST00000296161hsa-miR-125a-5p1225735181225735247mer-m8122573502122573525145.00-16.15
CAediting_303815chr3_122573523_+ENSG00000163840.8ENST00000296161hsa-miR-125b-5p1225735181225735247mer-m8122573504122573525145.00-16.42
CAediting_303815chr3_122573523_+ENSG00000163840.8ENST00000296161hsa-miR-125b-5p1225735181225735247mer-m8122573504122573525145.00-16.42
CAediting_303815chr3_122573523_+ENSG00000163840.8ENST00000296161hsa-miR-43191225735181225735247mer-m8122573509122573525140.00-15.83
CAediting_303815chr3_122573523_+ENSG00000163840.8ENST00000296161hsa-miR-43241225735171225735237mer-m8122573505122573524140.00-15.10
CAediting_303815chr3_122573523_+ENSG00000163840.8ENST00000296161hsa-miR-6761-5p1225735161225735227mer-m8122573501122573523148.00-20.66
CAediting_303816chr3_122573861_+ENSG00000163840.8ENST00000296161hsa-miR-340-3p1225738551225738617mer-m8122573841122573862146.00-22.09
CAediting_303816chr3_122573861_+ENSG00000163840.8ENST00000296161hsa-miR-6827-3p1225738551225738617mer-m8122573842122573862140.00-14.58
CAediting_303820chr3_122573924_+ENSG00000163840.8ENST00000296161hsa-miR-4649-3p1225739171225739237mer-m8122573905122573924146.00-16.06
CAediting_303820chr3_122573924_+ENSG00000163840.8ENST00000296161hsa-miR-7160-5p1225739181225739247mer-m8122573904122573925145.00-19.40
CAediting_303821chr3_122573964_+ENSG00000163840.8ENST00000296161hsa-miR-3622a-3p1225739601225739667mer-m8122573946122573967140.00-13.46
CAediting_303821chr3_122573964_+ENSG00000163840.8ENST00000296161hsa-miR-3622b-3p1225739601225739667mer-m8122573947122573967145.00-17.98
CAediting_303821chr3_122573964_+ENSG00000163840.8ENST00000296161hsa-miR-43241225739581225739647mer-m8122573946122573965146.00-11.39
CAediting_303821chr3_122573964_+ENSG00000163840.8ENST00000296161hsa-miR-6761-5p1225739571225739637mer-m8122573944122573964151.00-22.42
CAediting_303804chr3_122572707_+ENSG00000163840.8ENST00000296161hsa-miR-4691-3p1225727041225727107mer-m8122572684122572711150.00-26.36
CAediting_303806chr3_122572719_+ENSG00000163840.8ENST00000296161hsa-miR-100-5p1225727151225727217mer-m8122572702122572722160.00-20.88
CAediting_303806chr3_122572719_+ENSG00000163840.8ENST00000296161hsa-miR-99a-5p1225727151225727217mer-m8122572702122572722160.00-19.76
CAediting_303806chr3_122572719_+ENSG00000163840.8ENST00000296161hsa-miR-99b-5p1225727151225727217mer-m8122572702122572722152.00-24.40
CAediting_303811chr3_122572849_+ENSG00000163840.8ENST00000296161hsa-miR-79771225728431225728497mer-m8122572833122572850140.00-13.07
CAediting_303813chr3_122573495_+ENSG00000163840.8ENST00000296161hsa-miR-44211225734891225734957mer-m8122573472122573496159.00-21.81
CAediting_303813chr3_122573495_+ENSG00000163840.8ENST00000296161hsa-miR-4921225734921225734987mer-m8122573477122573499140.00-17.98
CAediting_303813chr3_122573495_+ENSG00000163840.8ENST00000296161hsa-miR-5699-3p1225734891225734957mer-m8122573478122573496148.00-20.68

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_303792chr3_122572021_+ENSG00000163840.8ENST00000296161hsa-let-7g-5p1225720181225720258mer-1a122572004122572025151-17.31
CAediting_303792chr3_122572021_+ENSG00000163840.8ENST00000296161hsa-let-7i-5p1225720181225720258mer-1a122572004122572025153-21.05
CAediting_303816chr3_122573861_+ENSG00000163840.8ENST00000296161hsa-miR-10a-5p1225738581225738647mer-m8122573845122573865143-13.68
CAediting_303816chr3_122573861_+ENSG00000163840.8ENST00000296161hsa-miR-10b-5p1225738581225738647mer-m8122573840122573865144-13.63
CAediting_303803chr3_122572629_+ENSG00000163840.8ENST00000296161hsa-miR-20a-3p1225726271225726337mer-m8122572615122572634145-14.88
CAediting_303795chr3_122572048_+ENSG00000163840.8ENST00000296161hsa-miR-20b-3p1225720441225720507mer-m8122572029122572051153-18.18
CAediting_303817chr3_122573869_+ENSG00000163840.8ENST00000296161hsa-miR-216a-3p1225738671225738737mer-m8122573852122573874154-21.79
CAediting_303797chr3_122572120_+ENSG00000163840.8ENST00000296161hsa-miR-3064-5p1225721191225721246mer122572105122572125140-20.99
CAediting_303789chr3_122571983_+ENSG00000163840.8ENST00000296161hsa-miR-31741225719791225719846mer122571965122571985142-24.12
CAediting_303810chr3_122572788_+ENSG00000163840.8ENST00000296161hsa-miR-3190-5p1225727821225727887mer-m8122572770122572789146-17.92
CAediting_303788chr3_122571964_+ENSG00000163840.8ENST00000296161hsa-miR-324-3p1225719611225719677mer-m8122571945122571968152-25.69
CAediting_303816chr3_122573861_+ENSG00000163840.8ENST00000296161hsa-miR-339-5p1225738571225738637mer-m8122573842122573864147-18.75
CAediting_303801chr3_122572597_+ENSG00000163840.8ENST00000296161hsa-miR-36711225725901225725967mer-m8122572577122572597155-6.43
CAediting_303817chr3_122573869_+ENSG00000163840.8ENST00000296161hsa-miR-36721225738631225738686mer122573845122573869150-17.01
CAediting_303817chr3_122573869_+ENSG00000163840.8ENST00000296161hsa-miR-3681-3p1225738671225738737mer-m8122573853122573874140-16.62
CAediting_303801chr3_122572597_+ENSG00000163840.8ENST00000296161hsa-miR-372-5p1225725911225725988mer-1a122572574122572598147-7.65
CAediting_303819chr3_122573923_+ENSG00000163840.8ENST00000296161hsa-miR-377-5p1225739211225739277mer-m8122573905122573928151-15.31
CAediting_303820chr3_122573924_+ENSG00000163840.8ENST00000296161hsa-miR-377-5p1225739211225739277mer-m8122573905122573928151-15.31
CAediting_303788chr3_122571964_+ENSG00000163840.8ENST00000296161hsa-miR-42521225719621225719698mer-1a122571949122571969151-21.92
CAediting_303790chr3_122571988_+ENSG00000163840.8ENST00000296161hsa-miR-43271225719841225719907mer-m8122571972122571991147-17.64
CAediting_303791chr3_122571989_+ENSG00000163840.8ENST00000296161hsa-miR-43271225719841225719907mer-m8122571972122571991147-17.64
CAediting_303816chr3_122573861_+ENSG00000163840.8ENST00000296161hsa-miR-44211225738561225738627mer-m8122573842122573863152-14.89
CAediting_303792chr3_122572021_+ENSG00000163840.8ENST00000296161hsa-miR-44581225720181225720258mer-1a122572005122572025151-20.51
CAediting_303793chr3_122572026_+ENSG00000163840.8ENST00000296161hsa-miR-44781225720231225720297mer-m8122572015122572030153-26.03
CAediting_303792chr3_122572021_+ENSG00000163840.8ENST00000296161hsa-miR-45001225720181225720258mer-1a122572009122572025147-15.01
CAediting_303790chr3_122571988_+ENSG00000163840.8ENST00000296161hsa-miR-45381225719861225719916mer122571970122571992143-27.8
CAediting_303791chr3_122571989_+ENSG00000163840.8ENST00000296161hsa-miR-45381225719861225719916mer122571970122571992143-27.8
CAediting_303816chr3_122573861_+ENSG00000163840.8ENST00000296161hsa-miR-4725-5p1225738591225738657mer-m8122573846122573866140-15.96
CAediting_303814chr3_122573522_+ENSG00000163840.8ENST00000296161hsa-miR-47801225735191225735268mer-1a122573505122573526145-15.32
CAediting_303815chr3_122573523_+ENSG00000163840.8ENST00000296161hsa-miR-47801225735191225735268mer-1a122573505122573526145-15.32
CAediting_303788chr3_122571964_+ENSG00000163840.8ENST00000296161hsa-miR-4793-3p1225719581225719647mer-m8122571942122571965145-20.91
CAediting_303793chr3_122572026_+ENSG00000163840.8ENST00000296161hsa-miR-485-5p1225720241225720307mer-m8122572010122572031149-17.51
CAediting_303815chr3_122573523_+ENSG00000163840.8ENST00000296161hsa-miR-5006-3p1225735211225735277mer-m8122573508122573528142-17.08
CAediting_303816chr3_122573861_+ENSG00000163840.8ENST00000296161hsa-miR-504-5p1225738591225738657mer-m8122573847122573866147-18.15
CAediting_303818chr3_122573888_+ENSG00000163840.8ENST00000296161hsa-miR-508-5p1225738831225738897mer-m8122573866122573890153-23.42
CAediting_303810chr3_122572788_+ENSG00000163840.8ENST00000296161hsa-miR-548s1225727811225727877mer-m8122572766122572788152-15.87
CAediting_303802chr3_122572609_+ENSG00000163840.8ENST00000296161hsa-miR-5586-3p1225726061225726127mer-m8122572592122572613148-14.57
CAediting_303794chr3_122572038_+ENSG00000163840.8ENST00000296161hsa-miR-56901225720351225720417mer-m8122572022122572042145-16.75
CAediting_303804chr3_122572707_+ENSG00000163840.8ENST00000296161hsa-miR-56901225727041225727107mer-m8122572691122572711145-17.72
CAediting_303816chr3_122573861_+ENSG00000163840.8ENST00000296161hsa-miR-5699-3p1225738561225738627mer-m8122573842122573863141-16.39
CAediting_303809chr3_122572762_+ENSG00000163840.8ENST00000296161hsa-miR-593-3p1225727611225727666mer122572749122572767140-18.96
CAediting_303796chr3_122572098_+ENSG00000163840.8ENST00000296161hsa-miR-593-3p1225720971225721037mer-1a122572085122572103140-19.02
CAediting_303819chr3_122573923_+ENSG00000163840.8ENST00000296161hsa-miR-60861225739211225739277mer-m8122573910122573928148-26.01
CAediting_303820chr3_122573924_+ENSG00000163840.8ENST00000296161hsa-miR-60861225739211225739277mer-m8122573910122573928148-26.01
CAediting_303814chr3_122573522_+ENSG00000163840.8ENST00000296161hsa-miR-6231225735201225735278mer-1a122573506122573527155-25.98
CAediting_303815chr3_122573523_+ENSG00000163840.8ENST00000296161hsa-miR-6231225735201225735278mer-1a122573506122573527155-25.98
CAediting_303818chr3_122573888_+ENSG00000163840.8ENST00000296161hsa-miR-6512-3p1225738811225738877mer-m8122573867122573888140-17.21
CAediting_303790chr3_122571988_+ENSG00000163840.8ENST00000296161hsa-miR-6516-5p1225719821225719887mer-m8122571967122571989146-16.25
CAediting_303791chr3_122571989_+ENSG00000163840.8ENST00000296161hsa-miR-6516-5p1225719821225719887mer-m8122571967122571989146-16.25
CAediting_303797chr3_122572120_+ENSG00000163840.8ENST00000296161hsa-miR-664a-5p1225721181225721247mer-m8122572103122572125148-14.11
CAediting_303788chr3_122571964_+ENSG00000163840.8ENST00000296161hsa-miR-6807-3p1225719601225719656mer122571944122571966152-27.13
CAediting_303812chr3_122573487_+ENSG00000163840.8ENST00000296161hsa-miR-6892-5p1225734801225734878mer-1a122573470122573487147-16.12
CAediting_303793chr3_122572026_+ENSG00000163840.8ENST00000296161hsa-miR-7160-5p1225720211225720277mer-m8122572008122572028150-19.41
CAediting_303793chr3_122572026_+ENSG00000163840.8ENST00000296161hsa-miR-7162-3p1225720201225720267mer-m8122572009122572027151-15.35
CAediting_303802chr3_122572609_+ENSG00000163840.8ENST00000296161hsa-miR-7591225726071225726137mer-m8122572592122572614147-13.06
CAediting_303818chr3_122573888_+ENSG00000163840.8ENST00000296161hsa-miR-766-3p1225738821225738887mer-m8122573868122573889145-23.46
CAediting_303788chr3_122571964_+ENSG00000163840.8ENST00000296161hsa-miR-77031225719571225719637mer-m8122571942122571964152-20.66
CAediting_303813chr3_122573495_+ENSG00000163840.8ENST00000296161hsa-miR-80831225734931225734997mer-m8122573480122573500147-12.83

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_980496chr14_31014685_-ENSG00000163840.8ENST00000296161hsa-miR-624-3p1225735101225735156mer122573497122573516140-15.35
CAediting_1054808chr15_66496985_-ENSG00000163840.8ENST00000296161hsa-miR-45121225736681225736747mer-m8122573654122573675140-16.04
CAediting_1229413chr17_67471544_+ENSG00000163840.8ENST00000296161hsa-miR-548aa1225750401225750467mer-m8122575027122575047159-20.05
CAediting_1229414chr17_67471546_+ENSG00000163840.8ENST00000296161hsa-miR-548aa1225740501225740567mer-m8122574033122574057140-10.72
CAediting_1229415chr17_67471547_+ENSG00000163840.8ENST00000296161hsa-miR-548aa1225739971225740037mer-m8122573980122574004151-15.53
CAediting_228905chr2_188297554_+ENSG00000163840.8ENST00000296161hsa-miR-561-3p1225736581225736636mer122573643122573664143-18.14
CAediting_442554chr5_154685830_+ENSG00000163840.8ENST00000296161hsa-miR-13031225744241225744318mer-1a122574410122574431150-18.56
CAediting_580943chr7_100356700_+ENSG00000163840.8ENST00000296161hsa-miR-6840-3p1225726661225726727mer-m8122572652122572673143-28
CAediting_524911chr7_5495852_-ENSG00000163840.8ENST00000296161hsa-miR-589-3p1225719381225719447mer-m8122571922122571945163-20.47

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_396018chr5_1062918_-ENSG00000163840.8ENST00000296161hsa-miR-46351225743661225743727mer-m8122574353122574373140-13.51
CAediting_1229413chr17_67471544_+ENSG00000163840.8ENST00000296161hsa-miR-548aa1225723991225724057mer-m8122572383122572406152-14.05
CAediting_1229414chr17_67471546_+ENSG00000163840.8ENST00000296161hsa-miR-548aa1225723991225724057mer-m8122572383122572406152-14.05
CAediting_1229415chr17_67471547_+ENSG00000163840.8ENST00000296161hsa-miR-548aa1225723991225724057mer-m8122572383122572406152-14.05
CAediting_1351755chr19_40282625_-ENSG00000163840.8ENST00000296161hsa-miR-6411225717621225717698mer-1a122571747122571769145-13.05
CAediting_1351755chr19_40282625_-ENSG00000163840.8ENST00000296161hsa-miR-6411225744471225744537mer-m8122574431122574454140-9.57
CAediting_580943chr7_100356700_+ENSG00000163840.8ENST00000296161hsa-miR-6840-3p1225735501225735567mer-m8122573534122573557153-22.8
CAediting_580943chr7_100356700_+ENSG00000163840.8ENST00000296161hsa-miR-6840-3p1225739261225739327mer-m8122573912122573933151-21.49

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for DTX3L

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.
ENST00000296161.7protein_codingSoverviewSoverview

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI
CAediting_303788ENST00000296161.7chr3_122571964_+-1770.30-1771.00-1834.10
CAediting_303789ENST00000296161.7chr3_122571983_+-1770.60-1771.00-1834.10
CAediting_303790ENST00000296161.7chr3_122571988_+-1771.00-1771.00-1834.10
CAediting_303791ENST00000296161.7chr3_122571989_+-1771.80-1771.00-1834.10
CAediting_303792ENST00000296161.7chr3_122572021_+-1771.00-1771.00-1834.10
CAediting_303793ENST00000296161.7chr3_122572026_+-1775.80-1771.00-1834.10
CAediting_303794ENST00000296161.7chr3_122572038_+-1772.60-1771.00-1834.10
CAediting_303795ENST00000296161.7chr3_122572048_+-1773.20-1771.00-1834.10
CAediting_303796ENST00000296161.7chr3_122572098_+-1769.70-1771.00-1834.10
CAediting_303797ENST00000296161.7chr3_122572120_+-1772.20-1771.00-1834.10
CAediting_303798ENST00000296161.7chr3_122572174_+-1773.40-1771.00-1834.10
CAediting_303799ENST00000296161.7chr3_122572175_+-1773.40-1771.00-1834.10
CAediting_303800ENST00000296161.7chr3_122572187_+-1771.00-1771.00-1834.10
CAediting_303801ENST00000296161.7chr3_122572597_+-1772.70-1771.00-1834.10
CAediting_303802ENST00000296161.7chr3_122572609_+-1776.40-1771.00-1834.10
CAediting_303803ENST00000296161.7chr3_122572629_+-1773.50-1771.00-1834.10
CAediting_303804ENST00000296161.7chr3_122572707_+-1772.40-1771.00-1834.10
CAediting_303805ENST00000296161.7chr3_122572717_+-1774.20-1771.00-1834.10
CAediting_303806ENST00000296161.7chr3_122572719_+-1771.80-1771.00-1834.10
CAediting_303807ENST00000296161.7chr3_122572744_+-1771.00-1771.00-1834.10
CAediting_303808ENST00000296161.7chr3_122572753_+-1770.70-1771.00-1834.10
CAediting_303809ENST00000296161.7chr3_122572762_+-1771.50-1771.00-1834.10
CAediting_303810ENST00000296161.7chr3_122572788_+-1770.30-1771.00-1834.10
CAediting_303811ENST00000296161.7chr3_122572849_+-1771.40-1771.00-1834.10
CAediting_303812ENST00000296161.7chr3_122573487_+-1777.40-1771.00-1834.10
CAediting_303813ENST00000296161.7chr3_122573495_+-1777.20-1771.00-1834.10
CAediting_303814ENST00000296161.7chr3_122573522_+-1771.40-1771.00-1834.10
CAediting_303815ENST00000296161.7chr3_122573523_+-1770.70-1771.00-1834.10
CAediting_303816ENST00000296161.7chr3_122573861_+-1772.50-1771.00-1834.10
CAediting_303817ENST00000296161.7chr3_122573869_+-1770.90-1771.00-1834.10
CAediting_303818ENST00000296161.7chr3_122573888_+-1775.20-1771.00-1834.10
CAediting_303819ENST00000296161.7chr3_122573923_+-1771.50-1771.00-1834.10
CAediting_303820ENST00000296161.7chr3_122573924_+-1774.70-1771.00-1834.10
CAediting_303821ENST00000296161.7chr3_122573964_+-1771.00-1771.00-1834.10
CAediting_303822ENST00000296161.7chr3_122574059_+-1774.20-1771.00-1834.10

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Relation with ADAR for DTX3L

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)

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Relation with cancer stages for DTX3L

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.
ESCApathologic_stageCAediting_303780chr3_122571391_+0.03199625109621990.270533530182232
STADpathologic_stageCAediting_303771chr3_122571353_+0.02261350773043680.266594565785339

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Relation with survival for DTX3L

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for DTX3L

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for DTX3L

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource