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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: NBPF12 (CAeditome ID:149013)

Gene summary for NBPF12

check button Gene summary
Gene informationGene symbol

NBPF12

Gene ID

149013

Gene nameNBPF member 12
SynonymsCOAS1|KIAA1245
Cytomap

1q21.1

Type of geneprotein-coding
Descriptionneuroblastoma breakpoint family member 12chomosome one amplified sequence 1 cyclophilinchromosome 1 amplified sequence 1
Modification date20210518
UniProtAcc

Q5TAG4

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID

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RNA A-to-I events for NBPF12

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000268043.6
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_93003(146939742, +), CAediting_93004(146939743, +), CAediting_93005(146939796, +), CAediting_93006(146939826, +), CAediting_93007(146939836, +), CAediting_93008(146939852, +), CAediting_93009(146940335, +), CAediting_93010(146940371, +), CAediting_93011(146940426, +), CAediting_93012(146940442, +), CAediting_93013(146940443, +), CAediting_93014(146940445, +), CAediting_93015(146940452, +), CAediting_93016(146940454, +), CAediting_93017(146940457, +), CAediting_93018(146941108, +), CAediting_93019(146941115, +), CAediting_93020(146941147, +), CAediting_93021(146941148, +), CAediting_93022(146941151, +), CAediting_93023(146941153, +), CAediting_93024(146941170, +), CAediting_93025(146941184, +), CAediting_93026(146941202, +), CAediting_93027(146941213, +), CAediting_93028(146941259, +), CAediting_93029(146941268, +), CAediting_93030(146941292, +), CAediting_93031(146941319, +), CAediting_93032(146941320, +), CAediting_93033(146941345, +), CAediting_93034(146941346, +), CAediting_93035(146941347, +), CAediting_93036(146941361, +), CAediting_93037(146941368, +), CAediting_93038(146941478, +), CAediting_93039(146941501, +), CAediting_93040(146941506, +), CAediting_93041(146941554, +), CAediting_93042(146941578, +), CAediting_93043(146941589, +), CAediting_93044(146941592, +), CAediting_93045(146941593, +), CAediting_93046(146941595, +), CAediting_93047(146941598, +), CAediting_93048(146941602, +), CAediting_93049(146941603, +), CAediting_93050(146941604, +), CAediting_93051(146941607, +), CAediting_93052(146941634, +), CAediting_93053(146941643, +), CAediting_93054(146941675, +), CAediting_93055(146941679, +), CAediting_93056(146941682, +), CAediting_93057(146941704, +), CAediting_93058(146941709, +), CAediting_93059(146941711, +), CAediting_93060(146941878, +), CAediting_93061(146941880, +), CAediting_93062(146941882, +), CAediting_93063(146941890, +), CAediting_93064(146941920, +), CAediting_93065(146941922, +), CAediting_93066(146941923, +), CAediting_93067(146941928, +), CAediting_93068(146941945, +), CAediting_93069(146941957, +), CAediting_93070(146941958, +), CAediting_93071(146941961, +), CAediting_93072(146942093, +), CAediting_93073(146942096, +), CAediting_93074(146942110, +), CAediting_93075(146942132, +), CAediting_93076(146942174, +), CAediting_93077(146942178, +), CAediting_93078(146942203, +), CAediting_93079(146942980, +), CAediting_93080(146942981, +), CAediting_93081(146942993, +), CAediting_93082(146942999, +), CAediting_93083(146943000, +), CAediting_93084(146943003, +), CAediting_93085(146943042, +), CAediting_93086(146948138, +), CAediting_93087(146948140, +), CAediting_93088(146948150, +), CAediting_93089(146948185, +), CAediting_93090(146954121, +), CAediting_93091(146954130, +), CAediting_93092(146954136, +), CAediting_93093(146954142, +), CAediting_93094(146954154, +), CAediting_93095(146954167, +), CAediting_93096(146958055, +), CAediting_93097(146995367, +), CAediting_93098(146995417, +), CAediting_93099(146995504, +), CAediting_93100(146995586, +), CAediting_93101(146995599, +), CAediting_93102(146995600, +), CAediting_93103(146995607, +), CAediting_93104(146995616, +), CAediting_93105(146995653, +), CAediting_93106(146995654, +), CAediting_93107(146995655, +), CAediting_93108(146995931, +),

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RNA editing positional annotations for NBPF12 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_93003chr1_146939742_+intronic
CAediting_93004chr1_146939743_+intronic
CAediting_93005chr1_146939796_+intronic
CAediting_93006chr1_146939826_+intronic
CAediting_93007chr1_146939836_+intronic
CAediting_93008chr1_146939852_+intronic
CAediting_93009chr1_146940335_+intronic
CAediting_93010chr1_146940371_+intronic
CAediting_93011chr1_146940426_+intronic
CAediting_93012chr1_146940442_+intronic
CAediting_93013chr1_146940443_+intronic
CAediting_93014chr1_146940445_+intronic
CAediting_93015chr1_146940452_+intronic
CAediting_93016chr1_146940454_+intronic
CAediting_93017chr1_146940457_+intronic
CAediting_93018chr1_146941108_+intronic
CAediting_93019chr1_146941115_+intronic
CAediting_93020chr1_146941147_+intronic
CAediting_93021chr1_146941148_+intronic
CAediting_93022chr1_146941151_+intronic
CAediting_93023chr1_146941153_+intronic
CAediting_93024chr1_146941170_+intronic
CAediting_93025chr1_146941184_+intronic
CAediting_93026chr1_146941202_+intronic
CAediting_93027chr1_146941213_+intronic
CAediting_93028chr1_146941259_+intronic
CAediting_93029chr1_146941268_+intronic
CAediting_93030chr1_146941292_+intronic
CAediting_93031chr1_146941319_+intronic
CAediting_93032chr1_146941320_+intronic
CAediting_93033chr1_146941345_+intronic
CAediting_93034chr1_146941346_+intronic
CAediting_93035chr1_146941347_+intronic
CAediting_93036chr1_146941361_+intronic
CAediting_93037chr1_146941368_+intronic
CAediting_93038chr1_146941478_+intronic
CAediting_93039chr1_146941501_+intronic
CAediting_93040chr1_146941506_+intronic
CAediting_93041chr1_146941554_+intronic
CAediting_93042chr1_146941578_+intronic
CAediting_93043chr1_146941589_+intronic
CAediting_93044chr1_146941592_+intronic
CAediting_93045chr1_146941593_+intronic
CAediting_93046chr1_146941595_+intronic
CAediting_93047chr1_146941598_+intronic
CAediting_93048chr1_146941602_+intronic
CAediting_93049chr1_146941603_+intronic
CAediting_93050chr1_146941604_+intronic
CAediting_93051chr1_146941607_+intronic
CAediting_93052chr1_146941634_+intronic
CAediting_93053chr1_146941643_+intronic
CAediting_93054chr1_146941675_+intronic
CAediting_93055chr1_146941679_+intronic
CAediting_93056chr1_146941682_+intronic
CAediting_93057chr1_146941704_+intronic
CAediting_93058chr1_146941709_+intronic
CAediting_93059chr1_146941711_+intronic
CAediting_93060chr1_146941878_+intronic
CAediting_93061chr1_146941880_+intronic
CAediting_93062chr1_146941882_+intronic
CAediting_93063chr1_146941890_+intronic
CAediting_93064chr1_146941920_+intronic
CAediting_93065chr1_146941922_+intronic
CAediting_93066chr1_146941923_+intronic
CAediting_93067chr1_146941928_+intronic
CAediting_93068chr1_146941945_+intronic
CAediting_93069chr1_146941957_+intronic
CAediting_93070chr1_146941958_+intronic
CAediting_93071chr1_146941961_+intronic
CAediting_93072chr1_146942093_+intronic
CAediting_93073chr1_146942096_+intronic
CAediting_93074chr1_146942110_+intronic
CAediting_93075chr1_146942132_+intronic
CAediting_93076chr1_146942174_+intronic
CAediting_93077chr1_146942178_+intronic
CAediting_93078chr1_146942203_+intronic
CAediting_93079chr1_146942980_+intronic
CAediting_93080chr1_146942981_+intronic
CAediting_93081chr1_146942993_+intronic
CAediting_93082chr1_146942999_+intronic
CAediting_93083chr1_146943000_+intronic
CAediting_93084chr1_146943003_+intronic
CAediting_93085chr1_146943042_+intronic
CAediting_93086chr1_146948138_+intronic
CAediting_93087chr1_146948140_+intronic
CAediting_93088chr1_146948150_+intronic
CAediting_93089chr1_146948185_+intronic
CAediting_93090chr1_146954121_+intronic
CAediting_93091chr1_146954130_+intronic
CAediting_93092chr1_146954136_+intronic
CAediting_93093chr1_146954142_+intronic
CAediting_93094chr1_146954154_+intronic
CAediting_93095chr1_146954167_+intronic
CAediting_93096chr1_146958055_+intronic
CAediting_93097chr1_146995367_+UTR3
CAediting_93098chr1_146995417_+UTR3
CAediting_93099chr1_146995504_+UTR3
CAediting_93100chr1_146995586_+UTR3
CAediting_93101chr1_146995599_+UTR3
CAediting_93102chr1_146995600_+UTR3
CAediting_93103chr1_146995607_+UTR3
CAediting_93104chr1_146995616_+UTR3
CAediting_93105chr1_146995653_+UTR3
CAediting_93106chr1_146995654_+UTR3
CAediting_93107chr1_146995655_+UTR3
CAediting_93108chr1_146995931_+UTR3

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_93003chr1_146939742_+SINEAluAluSc8
CAediting_93004chr1_146939743_+SINEAluAluSc8
CAediting_93005chr1_146939796_+SINEAluAluSc8
CAediting_93006chr1_146939826_+SINEAluAluSc8
CAediting_93007chr1_146939836_+SINEAluAluSc8
CAediting_93008chr1_146939852_+SINEAluAluSc8
CAediting_93009chr1_146940335_+SINEAluAluJb
CAediting_93010chr1_146940371_+SINEAluAluJb
CAediting_93011chr1_146940426_+SINEAluAluJb
CAediting_93012chr1_146940442_+SINEAluAluJb
CAediting_93013chr1_146940443_+SINEAluAluJb
CAediting_93014chr1_146940445_+SINEAluAluJb
CAediting_93015chr1_146940452_+SINEAluAluJb
CAediting_93016chr1_146940454_+SINEAluAluJb
CAediting_93017chr1_146940457_+SINEAluAluJb
CAediting_93018chr1_146941108_+SINEAluAluJb
CAediting_93019chr1_146941115_+SINEAluAluJb
CAediting_93020chr1_146941147_+SINEAluAluJb
CAediting_93021chr1_146941148_+SINEAluAluJb
CAediting_93022chr1_146941151_+SINEAluAluJb
CAediting_93023chr1_146941153_+SINEAluAluJb
CAediting_93024chr1_146941170_+SINEAluAluJb
CAediting_93025chr1_146941184_+SINEAluAluJb
CAediting_93026chr1_146941202_+SINEAluAluJb
CAediting_93027chr1_146941213_+SINEAluAluJb
CAediting_93028chr1_146941259_+SINEAluAluJb
CAediting_93029chr1_146941268_+SINEAluAluJb
CAediting_93030chr1_146941292_+SINEAluAluJb
CAediting_93031chr1_146941319_+SINEAluAluJb
CAediting_93032chr1_146941320_+SINEAluAluJb
CAediting_93033chr1_146941345_+SINEAluAluJb
CAediting_93034chr1_146941346_+SINEAluAluJb
CAediting_93035chr1_146941347_+SINEAluAluJb
CAediting_93036chr1_146941361_+SINEAluAluJb
CAediting_93037chr1_146941368_+SINEAluAluJb
CAediting_93038chr1_146941478_+SINEAluAluSg
CAediting_93039chr1_146941501_+SINEAluAluSg
CAediting_93040chr1_146941506_+SINEAluAluSg
CAediting_93041chr1_146941554_+SINEAluAluSg
CAediting_93042chr1_146941578_+SINEAluAluSg
CAediting_93043chr1_146941589_+SINEAluAluSg
CAediting_93044chr1_146941592_+SINEAluAluSg
CAediting_93045chr1_146941593_+SINEAluAluSg
CAediting_93046chr1_146941595_+SINEAluAluSg
CAediting_93047chr1_146941598_+SINEAluAluSg
CAediting_93048chr1_146941602_+SINEAluAluSg
CAediting_93049chr1_146941603_+SINEAluAluSg
CAediting_93050chr1_146941604_+SINEAluAluSg
CAediting_93051chr1_146941607_+SINEAluAluSg
CAediting_93052chr1_146941634_+SINEAluAluSg
CAediting_93053chr1_146941643_+SINEAluAluSg
CAediting_93054chr1_146941675_+SINEAluAluSg
CAediting_93055chr1_146941679_+SINEAluAluSg
CAediting_93056chr1_146941682_+SINEAluAluSg
CAediting_93057chr1_146941704_+SINEAluAluSg
CAediting_93058chr1_146941709_+SINEAluAluSg
CAediting_93059chr1_146941711_+SINEAluAluSg
CAediting_93060chr1_146941878_+SINEAluAluJb
CAediting_93061chr1_146941880_+SINEAluAluJb
CAediting_93062chr1_146941882_+SINEAluAluJb
CAediting_93063chr1_146941890_+SINEAluAluJb
CAediting_93064chr1_146941920_+SINEAluAluJb
CAediting_93065chr1_146941922_+SINEAluAluJb
CAediting_93066chr1_146941923_+SINEAluAluJb
CAediting_93067chr1_146941928_+SINEAluAluJb
CAediting_93068chr1_146941945_+SINEAluAluJb
CAediting_93069chr1_146941957_+SINEAluAluJb
CAediting_93070chr1_146941958_+SINEAluAluJb
CAediting_93071chr1_146941961_+SINEAluAluJb
CAediting_93072chr1_146942093_+SINEAluAluJb
CAediting_93073chr1_146942096_+SINEAluAluJb
CAediting_93074chr1_146942110_+SINEAluAluJb
CAediting_93075chr1_146942132_+SINEAluAluJb
CAediting_93076chr1_146942174_+SINEAluAluJo
CAediting_93077chr1_146942178_+SINEAluAluJo
CAediting_93078chr1_146942203_+SINEAluAluJo
CAediting_93079chr1_146942980_+SINEAluAluJr4
CAediting_93080chr1_146942981_+SINEAluAluJr4
CAediting_93081chr1_146942993_+SINEAluAluJr4
CAediting_93082chr1_146942999_+SINEAluAluJr4
CAediting_93083chr1_146943000_+SINEAluAluJr4
CAediting_93084chr1_146943003_+SINEAluAluJr4
CAediting_93085chr1_146943042_+SINEAluAluJr4
CAediting_93086chr1_146948138_+SINEAluAluSq2
CAediting_93087chr1_146948140_+SINEAluAluSq2
CAediting_93088chr1_146948150_+SINEAluAluSq2
CAediting_93089chr1_146948185_+SINEAluAluSq2
CAediting_93090chr1_146954121_+SINEAluAluSc8
CAediting_93091chr1_146954130_+SINEAluAluSc8
CAediting_93092chr1_146954136_+SINEAluAluSc8
CAediting_93093chr1_146954142_+SINEAluAluSc8
CAediting_93094chr1_146954154_+SINEAluAluSc8
CAediting_93095chr1_146954167_+SINEAluAluSc8
CAediting_93096chr1_146958055_+LINEL1L1PA6
CAediting_93097chr1_146995367_+LINEL1L1MC4
CAediting_93098chr1_146995417_+LINEL1L1MC4
CAediting_93099chr1_146995504_+LINEL1L1MC4
CAediting_93100chr1_146995586_+LINEL1L1MC4
CAediting_93101chr1_146995599_+LINEL1L1MC4
CAediting_93102chr1_146995600_+LINEL1L1MC4
CAediting_93103chr1_146995607_+LINEL1L1MC4
CAediting_93104chr1_146995616_+LINEL1L1MC4
CAediting_93105chr1_146995653_+LINEL1L1MC4
CAediting_93106chr1_146995654_+LINEL1L1MC4
CAediting_93107chr1_146995655_+LINEL1L1MC4
CAediting_93108chr1_146995931_+LINEL1L1MC4

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RNA A-to-I editing events in the alternative splicing sites for NBPF12

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000268043.6.NBPF12.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000268043.6.NBPF12.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for NBPF12

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.
TGCT.CAediting_93102.ENSG00000268043.NBPF12.png
Soverview

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Protein coding region RNA A-to-I editings for NBPF12

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for NBPF12

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_93098chr1_146995417_+ENSG00000268043.6ENST00000617931hsa-miR-4802-3p1469954111469954177mer-m8146995396146995418141.00-11.10
CAediting_93098chr1_146995417_+ENSG00000268043.6ENST00000617844hsa-miR-4802-3p1469954111469954177mer-m8146995396146995418141.00-11.10
CAediting_93098chr1_146995417_+ENSG00000268043.6ENST00000611443hsa-miR-4802-3p1469954111469954177mer-m8146995396146995418141.00-11.10
CAediting_93098chr1_146995417_+ENSG00000268043.6ENST00000617614hsa-miR-4802-3p1469954111469954177mer-m8146995396146995418141.00-11.10
CAediting_93098chr1_146995417_+ENSG00000268043.6ENST00000579935hsa-miR-4802-3p1469954111469954177mer-m8146995396146995418141.00-11.10
CAediting_93100chr1_146995586_+ENSG00000268043.6ENST00000617931hsa-miR-45371469955831469955897mer-m8146995569146995590157.00-22.23
CAediting_93100chr1_146995586_+ENSG00000268043.6ENST00000617844hsa-miR-45371469955831469955897mer-m8146995569146995590157.00-22.23
CAediting_93100chr1_146995586_+ENSG00000268043.6ENST00000611443hsa-miR-45371469955831469955897mer-m8146995569146995590157.00-22.23
CAediting_93100chr1_146995586_+ENSG00000268043.6ENST00000617614hsa-miR-45371469955831469955897mer-m8146995569146995590157.00-22.23
CAediting_93100chr1_146995586_+ENSG00000268043.6ENST00000579935hsa-miR-45371469955831469955897mer-m8146995569146995590157.00-22.23
CAediting_93101chr1_146995599_+ENSG00000268043.6ENST00000617931hsa-miR-136-3p1469955971469956037mer-m8146995584146995604154.00-16.11
CAediting_93101chr1_146995599_+ENSG00000268043.6ENST00000617844hsa-miR-136-3p1469955971469956037mer-m8146995584146995604154.00-16.11
CAediting_93101chr1_146995599_+ENSG00000268043.6ENST00000611443hsa-miR-136-3p1469955971469956037mer-m8146995584146995604154.00-16.11
CAediting_93101chr1_146995599_+ENSG00000268043.6ENST00000617614hsa-miR-136-3p1469955971469956037mer-m8146995584146995604154.00-16.11
CAediting_93101chr1_146995599_+ENSG00000268043.6ENST00000579935hsa-miR-136-3p1469955971469956037mer-m8146995584146995604154.00-16.11
CAediting_93102chr1_146995600_+ENSG00000268043.6ENST00000617931hsa-miR-1199-5p1469955931469955997mer-m8146995581146995600148.00-16.52
CAediting_93102chr1_146995600_+ENSG00000268043.6ENST00000617931hsa-miR-181b-2-3p1469955961469956027mer-m8146995583146995603146.00-13.30
CAediting_93102chr1_146995600_+ENSG00000268043.6ENST00000617931hsa-miR-181b-3p1469955961469956027mer-m8146995584146995603149.00-12.98
CAediting_93102chr1_146995600_+ENSG00000268043.6ENST00000617931hsa-miR-44201469955961469956027mer-m8146995582146995603157.00-24.48
CAediting_93102chr1_146995600_+ENSG00000268043.6ENST00000617931hsa-miR-6751-3p1469955931469955997mer-m8146995580146995600140.00-18.13
CAediting_93102chr1_146995600_+ENSG00000268043.6ENST00000617844hsa-miR-1199-5p1469955931469955997mer-m8146995581146995600148.00-16.52
CAediting_93102chr1_146995600_+ENSG00000268043.6ENST00000617844hsa-miR-181b-2-3p1469955961469956027mer-m8146995583146995603146.00-13.30
CAediting_93102chr1_146995600_+ENSG00000268043.6ENST00000617844hsa-miR-181b-3p1469955961469956027mer-m8146995584146995603149.00-12.98
CAediting_93102chr1_146995600_+ENSG00000268043.6ENST00000617844hsa-miR-44201469955961469956027mer-m8146995582146995603157.00-24.48
CAediting_93102chr1_146995600_+ENSG00000268043.6ENST00000617844hsa-miR-6751-3p1469955931469955997mer-m8146995580146995600140.00-18.13
CAediting_93102chr1_146995600_+ENSG00000268043.6ENST00000611443hsa-miR-1199-5p1469955931469955997mer-m8146995581146995600148.00-16.52
CAediting_93102chr1_146995600_+ENSG00000268043.6ENST00000611443hsa-miR-181b-2-3p1469955961469956027mer-m8146995583146995603146.00-13.30
CAediting_93102chr1_146995600_+ENSG00000268043.6ENST00000611443hsa-miR-181b-3p1469955961469956027mer-m8146995584146995603149.00-12.98
CAediting_93102chr1_146995600_+ENSG00000268043.6ENST00000611443hsa-miR-44201469955961469956027mer-m8146995582146995603157.00-24.48
CAediting_93102chr1_146995600_+ENSG00000268043.6ENST00000611443hsa-miR-6751-3p1469955931469955997mer-m8146995580146995600140.00-18.13
CAediting_93102chr1_146995600_+ENSG00000268043.6ENST00000617614hsa-miR-1199-5p1469955931469955997mer-m8146995581146995600148.00-16.52
CAediting_93102chr1_146995600_+ENSG00000268043.6ENST00000617614hsa-miR-181b-2-3p1469955961469956027mer-m8146995583146995603146.00-13.30
CAediting_93102chr1_146995600_+ENSG00000268043.6ENST00000617614hsa-miR-181b-3p1469955961469956027mer-m8146995584146995603149.00-12.98
CAediting_93102chr1_146995600_+ENSG00000268043.6ENST00000617614hsa-miR-44201469955961469956027mer-m8146995582146995603157.00-24.48
CAediting_93102chr1_146995600_+ENSG00000268043.6ENST00000617614hsa-miR-6751-3p1469955931469955997mer-m8146995580146995600140.00-18.13
CAediting_93102chr1_146995600_+ENSG00000268043.6ENST00000579935hsa-miR-1199-5p1469955931469955997mer-m8146995581146995600148.00-16.52
CAediting_93102chr1_146995600_+ENSG00000268043.6ENST00000579935hsa-miR-181b-2-3p1469955961469956027mer-m8146995583146995603146.00-13.30
CAediting_93102chr1_146995600_+ENSG00000268043.6ENST00000579935hsa-miR-181b-3p1469955961469956027mer-m8146995584146995603149.00-12.98
CAediting_93102chr1_146995600_+ENSG00000268043.6ENST00000579935hsa-miR-44201469955961469956027mer-m8146995582146995603157.00-24.48
CAediting_93102chr1_146995600_+ENSG00000268043.6ENST00000579935hsa-miR-6751-3p1469955931469955997mer-m8146995580146995600140.00-18.13
CAediting_93106chr1_146995654_+ENSG00000268043.6ENST00000617931hsa-miR-6451469956471469956548mer-1a146995636146995654146.00-17.18
CAediting_93106chr1_146995654_+ENSG00000268043.6ENST00000617931hsa-miR-80781469956491469956557mer-m8146995634146995656146.00-16.33
CAediting_93106chr1_146995654_+ENSG00000268043.6ENST00000617844hsa-miR-6451469956471469956548mer-1a146995636146995654146.00-17.18
CAediting_93106chr1_146995654_+ENSG00000268043.6ENST00000617844hsa-miR-80781469956491469956557mer-m8146995634146995656146.00-16.33
CAediting_93106chr1_146995654_+ENSG00000268043.6ENST00000611443hsa-miR-6451469956471469956548mer-1a146995636146995654146.00-17.18
CAediting_93106chr1_146995654_+ENSG00000268043.6ENST00000611443hsa-miR-80781469956491469956557mer-m8146995634146995656146.00-16.33
CAediting_93106chr1_146995654_+ENSG00000268043.6ENST00000617614hsa-miR-6451469956471469956548mer-1a146995636146995654146.00-17.18
CAediting_93106chr1_146995654_+ENSG00000268043.6ENST00000617614hsa-miR-80781469956491469956557mer-m8146995634146995656146.00-16.33
CAediting_93106chr1_146995654_+ENSG00000268043.6ENST00000579935hsa-miR-6451469956471469956548mer-1a146995636146995654146.00-17.18
CAediting_93106chr1_146995654_+ENSG00000268043.6ENST00000579935hsa-miR-80781469956491469956557mer-m8146995634146995656146.00-16.33
CAediting_93103chr1_146995607_+ENSG00000268043.6ENST00000617931hsa-miR-1288-5p1469956001469956067mer-m8146995585146995607140.00-13.66
CAediting_93103chr1_146995607_+ENSG00000268043.6ENST00000617844hsa-miR-1288-5p1469956001469956067mer-m8146995585146995607140.00-13.66
CAediting_93103chr1_146995607_+ENSG00000268043.6ENST00000611443hsa-miR-1288-5p1469956001469956067mer-m8146995585146995607140.00-13.66
CAediting_93103chr1_146995607_+ENSG00000268043.6ENST00000617614hsa-miR-1288-5p1469956001469956067mer-m8146995585146995607140.00-13.66
CAediting_93103chr1_146995607_+ENSG00000268043.6ENST00000579935hsa-miR-1288-5p1469956001469956067mer-m8146995585146995607140.00-13.66
CAediting_93105chr1_146995653_+ENSG00000268043.6ENST00000617931hsa-miR-5000-5p1469956501469956567mer-m8146995631146995657142.00-12.46
CAediting_93105chr1_146995653_+ENSG00000268043.6ENST00000617844hsa-miR-5000-5p1469956501469956567mer-m8146995631146995657142.00-12.46
CAediting_93105chr1_146995653_+ENSG00000268043.6ENST00000611443hsa-miR-5000-5p1469956501469956567mer-m8146995631146995657142.00-12.46
CAediting_93105chr1_146995653_+ENSG00000268043.6ENST00000617614hsa-miR-5000-5p1469956501469956567mer-m8146995631146995657142.00-12.46
CAediting_93105chr1_146995653_+ENSG00000268043.6ENST00000579935hsa-miR-5000-5p1469956501469956567mer-m8146995631146995657142.00-12.46
CAediting_93108chr1_146995931_+ENSG00000268043.6ENST00000617931hsa-let-7a-3p1469959281469959347mer-m8146995915146995935145.00-5.24
CAediting_93108chr1_146995931_+ENSG00000268043.6ENST00000617931hsa-let-7a-3p1469959281469959347mer-m8146995915146995935145.00-5.24
CAediting_93108chr1_146995931_+ENSG00000268043.6ENST00000617931hsa-let-7b-3p1469959281469959347mer-m8146995914146995935140.00-4.22
CAediting_93108chr1_146995931_+ENSG00000268043.6ENST00000617931hsa-let-7f-1-3p1469959281469959347mer-m8146995915146995935147.00-5.24
CAediting_93108chr1_146995931_+ENSG00000268043.6ENST00000617931hsa-miR-1185-1-3p1469959291469959346mer146995914146995935142.00-11.48
CAediting_93108chr1_146995931_+ENSG00000268043.6ENST00000617931hsa-miR-1185-2-3p1469959291469959346mer146995914146995935142.00-11.60
CAediting_93108chr1_146995931_+ENSG00000268043.6ENST00000617931hsa-miR-4666a-3p1469959271469959348mer-1a146995914146995934146.00-9.48
CAediting_93108chr1_146995931_+ENSG00000268043.6ENST00000617931hsa-miR-98-3p1469959281469959347mer-m8146995916146995935144.00-4.22
CAediting_93108chr1_146995931_+ENSG00000268043.6ENST00000617844hsa-let-7a-3p1469959281469959347mer-m8146995915146995935145.00-5.24
CAediting_93108chr1_146995931_+ENSG00000268043.6ENST00000617844hsa-let-7a-3p1469959281469959347mer-m8146995915146995935145.00-5.24
CAediting_93108chr1_146995931_+ENSG00000268043.6ENST00000617844hsa-let-7b-3p1469959281469959347mer-m8146995914146995935140.00-4.22
CAediting_93108chr1_146995931_+ENSG00000268043.6ENST00000617844hsa-let-7f-1-3p1469959281469959347mer-m8146995915146995935147.00-5.24
CAediting_93108chr1_146995931_+ENSG00000268043.6ENST00000617844hsa-miR-1185-1-3p1469959291469959346mer146995914146995935142.00-11.48
CAediting_93108chr1_146995931_+ENSG00000268043.6ENST00000617844hsa-miR-1185-2-3p1469959291469959346mer146995914146995935142.00-11.60
CAediting_93108chr1_146995931_+ENSG00000268043.6ENST00000617844hsa-miR-4666a-3p1469959271469959348mer-1a146995914146995934146.00-9.48
CAediting_93108chr1_146995931_+ENSG00000268043.6ENST00000617844hsa-miR-98-3p1469959281469959347mer-m8146995916146995935144.00-4.22
CAediting_93108chr1_146995931_+ENSG00000268043.6ENST00000611443hsa-let-7a-3p1469959281469959347mer-m8146995915146995935145.00-5.24
CAediting_93108chr1_146995931_+ENSG00000268043.6ENST00000611443hsa-let-7a-3p1469959281469959347mer-m8146995915146995935145.00-5.24
CAediting_93108chr1_146995931_+ENSG00000268043.6ENST00000611443hsa-let-7b-3p1469959281469959347mer-m8146995914146995935140.00-4.22
CAediting_93108chr1_146995931_+ENSG00000268043.6ENST00000611443hsa-let-7f-1-3p1469959281469959347mer-m8146995915146995935147.00-5.24
CAediting_93108chr1_146995931_+ENSG00000268043.6ENST00000611443hsa-miR-1185-1-3p1469959291469959346mer146995914146995935142.00-11.48
CAediting_93108chr1_146995931_+ENSG00000268043.6ENST00000611443hsa-miR-1185-2-3p1469959291469959346mer146995914146995935142.00-11.60
CAediting_93108chr1_146995931_+ENSG00000268043.6ENST00000611443hsa-miR-4666a-3p1469959271469959348mer-1a146995914146995934146.00-9.48
CAediting_93108chr1_146995931_+ENSG00000268043.6ENST00000611443hsa-miR-98-3p1469959281469959347mer-m8146995916146995935144.00-4.22
CAediting_93108chr1_146995931_+ENSG00000268043.6ENST00000617614hsa-let-7a-3p1469959281469959347mer-m8146995915146995935145.00-5.24
CAediting_93108chr1_146995931_+ENSG00000268043.6ENST00000617614hsa-let-7a-3p1469959281469959347mer-m8146995915146995935145.00-5.24
CAediting_93108chr1_146995931_+ENSG00000268043.6ENST00000617614hsa-let-7b-3p1469959281469959347mer-m8146995914146995935140.00-4.22
CAediting_93108chr1_146995931_+ENSG00000268043.6ENST00000617614hsa-let-7f-1-3p1469959281469959347mer-m8146995915146995935147.00-5.24
CAediting_93108chr1_146995931_+ENSG00000268043.6ENST00000617614hsa-miR-1185-1-3p1469959291469959346mer146995914146995935142.00-11.48
CAediting_93108chr1_146995931_+ENSG00000268043.6ENST00000617614hsa-miR-1185-2-3p1469959291469959346mer146995914146995935142.00-11.60
CAediting_93108chr1_146995931_+ENSG00000268043.6ENST00000617614hsa-miR-4666a-3p1469959271469959348mer-1a146995914146995934146.00-9.48
CAediting_93108chr1_146995931_+ENSG00000268043.6ENST00000617614hsa-miR-98-3p1469959281469959347mer-m8146995916146995935144.00-4.22
CAediting_93108chr1_146995931_+ENSG00000268043.6ENST00000579935hsa-let-7a-3p1469959281469959347mer-m8146995915146995935145.00-5.24
CAediting_93108chr1_146995931_+ENSG00000268043.6ENST00000579935hsa-let-7a-3p1469959281469959347mer-m8146995915146995935145.00-5.24
CAediting_93108chr1_146995931_+ENSG00000268043.6ENST00000579935hsa-let-7b-3p1469959281469959347mer-m8146995914146995935140.00-4.22
CAediting_93108chr1_146995931_+ENSG00000268043.6ENST00000579935hsa-let-7f-1-3p1469959281469959347mer-m8146995915146995935147.00-5.24
CAediting_93108chr1_146995931_+ENSG00000268043.6ENST00000579935hsa-miR-1185-1-3p1469959291469959346mer146995914146995935142.00-11.48
CAediting_93108chr1_146995931_+ENSG00000268043.6ENST00000579935hsa-miR-1185-2-3p1469959291469959346mer146995914146995935142.00-11.60
CAediting_93108chr1_146995931_+ENSG00000268043.6ENST00000579935hsa-miR-4666a-3p1469959271469959348mer-1a146995914146995934146.00-9.48
CAediting_93108chr1_146995931_+ENSG00000268043.6ENST00000579935hsa-miR-98-3p1469959281469959347mer-m8146995916146995935144.00-4.22

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_93100chr1_146995586_+ENSG00000268043.6ENST00000617931hsa-miR-3160-3p1469955831469955897mer-m8146995569146995590140-15.6
CAediting_93100chr1_146995586_+ENSG00000268043.6ENST00000617931hsa-miR-3160-3p1469955831469955897mer-m8146995569146995590140-15.6
CAediting_93098chr1_146995417_+ENSG00000268043.6ENST00000617931hsa-miR-3689a-5p1469954141469954207mer-m8146995400146995421140-10.31
CAediting_93098chr1_146995417_+ENSG00000268043.6ENST00000617931hsa-miR-3689b-5p1469954141469954207mer-m8146995400146995421140-10.31
CAediting_93098chr1_146995417_+ENSG00000268043.6ENST00000617931hsa-miR-3689e1469954141469954207mer-m8146995400146995421140-10.31
CAediting_93098chr1_146995417_+ENSG00000268043.6ENST00000617931hsa-miR-3689f1469954141469954207mer-m8146995401146995421146-10.66
CAediting_93108chr1_146995931_+ENSG00000268043.6ENST00000617931hsa-miR-374a-5p1469959261469959327mer-m8146995912146995933140-5.26
CAediting_93108chr1_146995931_+ENSG00000268043.6ENST00000617931hsa-miR-374b-5p1469959261469959327mer-m8146995912146995933140-6.33
CAediting_93099chr1_146995504_+ENSG00000268043.6ENST00000617931hsa-miR-46981469955031469955097mer-1a146995485146995509143-13.25
CAediting_93097chr1_146995367_+ENSG00000268043.6ENST00000617931hsa-miR-544a1469953601469953667mer-m8146995346146995367149-9.07
CAediting_93106chr1_146995654_+ENSG00000268043.6ENST00000617931hsa-miR-561-3p1469956521469956587mer-m8146995637146995659151-7.49
CAediting_93107chr1_146995655_+ENSG00000268043.6ENST00000617931hsa-miR-561-3p1469956521469956587mer-m8146995637146995659151-7.49
CAediting_93101chr1_146995599_+ENSG00000268043.6ENST00000617931hsa-miR-6807-5p1469955921469955998mer-1a146995578146995599153-20.98
CAediting_93098chr1_146995417_+ENSG00000268043.6ENST00000617931hsa-miR-80761469954111469954177mer-m8146995396146995418155-12.69
CAediting_93100chr1_146995586_+ENSG00000268043.6ENST00000617844hsa-miR-3160-3p1469955831469955897mer-m8146995569146995590140-15.6
CAediting_93100chr1_146995586_+ENSG00000268043.6ENST00000617844hsa-miR-3160-3p1469955831469955897mer-m8146995569146995590140-15.6
CAediting_93098chr1_146995417_+ENSG00000268043.6ENST00000617844hsa-miR-3689a-5p1469954141469954207mer-m8146995400146995421140-10.31
CAediting_93098chr1_146995417_+ENSG00000268043.6ENST00000617844hsa-miR-3689b-5p1469954141469954207mer-m8146995400146995421140-10.31
CAediting_93098chr1_146995417_+ENSG00000268043.6ENST00000617844hsa-miR-3689e1469954141469954207mer-m8146995400146995421140-10.31
CAediting_93098chr1_146995417_+ENSG00000268043.6ENST00000617844hsa-miR-3689f1469954141469954207mer-m8146995401146995421146-10.66
CAediting_93108chr1_146995931_+ENSG00000268043.6ENST00000617844hsa-miR-374a-5p1469959261469959327mer-m8146995912146995933140-5.26
CAediting_93108chr1_146995931_+ENSG00000268043.6ENST00000617844hsa-miR-374b-5p1469959261469959327mer-m8146995912146995933140-6.33
CAediting_93099chr1_146995504_+ENSG00000268043.6ENST00000617844hsa-miR-46981469955031469955097mer-1a146995485146995509143-13.25
CAediting_93097chr1_146995367_+ENSG00000268043.6ENST00000617844hsa-miR-544a1469953601469953667mer-m8146995346146995367149-9.07
CAediting_93106chr1_146995654_+ENSG00000268043.6ENST00000617844hsa-miR-561-3p1469956521469956587mer-m8146995637146995659151-7.49
CAediting_93107chr1_146995655_+ENSG00000268043.6ENST00000617844hsa-miR-561-3p1469956521469956587mer-m8146995637146995659151-7.49
CAediting_93101chr1_146995599_+ENSG00000268043.6ENST00000617844hsa-miR-6807-5p1469955921469955998mer-1a146995578146995599153-20.98
CAediting_93098chr1_146995417_+ENSG00000268043.6ENST00000617844hsa-miR-80761469954111469954177mer-m8146995396146995418155-12.69
CAediting_93100chr1_146995586_+ENSG00000268043.6ENST00000611443hsa-miR-3160-3p1469955831469955897mer-m8146995569146995590140-15.6
CAediting_93100chr1_146995586_+ENSG00000268043.6ENST00000611443hsa-miR-3160-3p1469955831469955897mer-m8146995569146995590140-15.6
CAediting_93098chr1_146995417_+ENSG00000268043.6ENST00000611443hsa-miR-3689a-5p1469954141469954207mer-m8146995400146995421140-10.31
CAediting_93098chr1_146995417_+ENSG00000268043.6ENST00000611443hsa-miR-3689b-5p1469954141469954207mer-m8146995400146995421140-10.31
CAediting_93098chr1_146995417_+ENSG00000268043.6ENST00000611443hsa-miR-3689e1469954141469954207mer-m8146995400146995421140-10.31
CAediting_93098chr1_146995417_+ENSG00000268043.6ENST00000611443hsa-miR-3689f1469954141469954207mer-m8146995401146995421146-10.66
CAediting_93108chr1_146995931_+ENSG00000268043.6ENST00000611443hsa-miR-374a-5p1469959261469959327mer-m8146995912146995933140-5.26
CAediting_93108chr1_146995931_+ENSG00000268043.6ENST00000611443hsa-miR-374b-5p1469959261469959327mer-m8146995912146995933140-6.33
CAediting_93099chr1_146995504_+ENSG00000268043.6ENST00000611443hsa-miR-46981469955031469955097mer-1a146995485146995509143-13.25
CAediting_93097chr1_146995367_+ENSG00000268043.6ENST00000611443hsa-miR-544a1469953601469953667mer-m8146995346146995367149-9.07
CAediting_93106chr1_146995654_+ENSG00000268043.6ENST00000611443hsa-miR-561-3p1469956521469956587mer-m8146995637146995659151-7.49
CAediting_93107chr1_146995655_+ENSG00000268043.6ENST00000611443hsa-miR-561-3p1469956521469956587mer-m8146995637146995659151-7.49
CAediting_93101chr1_146995599_+ENSG00000268043.6ENST00000611443hsa-miR-6807-5p1469955921469955998mer-1a146995578146995599153-20.98
CAediting_93098chr1_146995417_+ENSG00000268043.6ENST00000611443hsa-miR-80761469954111469954177mer-m8146995396146995418155-12.69
CAediting_93100chr1_146995586_+ENSG00000268043.6ENST00000617614hsa-miR-3160-3p1469955831469955897mer-m8146995569146995590140-15.6
CAediting_93100chr1_146995586_+ENSG00000268043.6ENST00000617614hsa-miR-3160-3p1469955831469955897mer-m8146995569146995590140-15.6
CAediting_93098chr1_146995417_+ENSG00000268043.6ENST00000617614hsa-miR-3689a-5p1469954141469954207mer-m8146995400146995421140-10.31
CAediting_93098chr1_146995417_+ENSG00000268043.6ENST00000617614hsa-miR-3689b-5p1469954141469954207mer-m8146995400146995421140-10.31
CAediting_93098chr1_146995417_+ENSG00000268043.6ENST00000617614hsa-miR-3689e1469954141469954207mer-m8146995400146995421140-10.31
CAediting_93098chr1_146995417_+ENSG00000268043.6ENST00000617614hsa-miR-3689f1469954141469954207mer-m8146995401146995421146-10.66
CAediting_93108chr1_146995931_+ENSG00000268043.6ENST00000617614hsa-miR-374a-5p1469959261469959327mer-m8146995912146995933140-5.26
CAediting_93108chr1_146995931_+ENSG00000268043.6ENST00000617614hsa-miR-374b-5p1469959261469959327mer-m8146995912146995933140-6.33
CAediting_93099chr1_146995504_+ENSG00000268043.6ENST00000617614hsa-miR-46981469955031469955097mer-1a146995485146995509143-13.25
CAediting_93097chr1_146995367_+ENSG00000268043.6ENST00000617614hsa-miR-544a1469953601469953667mer-m8146995346146995367149-9.07
CAediting_93106chr1_146995654_+ENSG00000268043.6ENST00000617614hsa-miR-561-3p1469956521469956587mer-m8146995637146995659151-7.49
CAediting_93107chr1_146995655_+ENSG00000268043.6ENST00000617614hsa-miR-561-3p1469956521469956587mer-m8146995637146995659151-7.49
CAediting_93101chr1_146995599_+ENSG00000268043.6ENST00000617614hsa-miR-6807-5p1469955921469955998mer-1a146995578146995599153-20.98
CAediting_93098chr1_146995417_+ENSG00000268043.6ENST00000617614hsa-miR-80761469954111469954177mer-m8146995396146995418155-12.69
CAediting_93100chr1_146995586_+ENSG00000268043.6ENST00000579935hsa-miR-3160-3p1469955831469955897mer-m8146995569146995590140-15.6
CAediting_93100chr1_146995586_+ENSG00000268043.6ENST00000579935hsa-miR-3160-3p1469955831469955897mer-m8146995569146995590140-15.6
CAediting_93098chr1_146995417_+ENSG00000268043.6ENST00000579935hsa-miR-3689a-5p1469954141469954207mer-m8146995400146995421140-10.31
CAediting_93098chr1_146995417_+ENSG00000268043.6ENST00000579935hsa-miR-3689b-5p1469954141469954207mer-m8146995400146995421140-10.31
CAediting_93098chr1_146995417_+ENSG00000268043.6ENST00000579935hsa-miR-3689e1469954141469954207mer-m8146995400146995421140-10.31
CAediting_93098chr1_146995417_+ENSG00000268043.6ENST00000579935hsa-miR-3689f1469954141469954207mer-m8146995401146995421146-10.66
CAediting_93108chr1_146995931_+ENSG00000268043.6ENST00000579935hsa-miR-374a-5p1469959261469959327mer-m8146995912146995933140-5.26
CAediting_93108chr1_146995931_+ENSG00000268043.6ENST00000579935hsa-miR-374b-5p1469959261469959327mer-m8146995912146995933140-6.33
CAediting_93099chr1_146995504_+ENSG00000268043.6ENST00000579935hsa-miR-46981469955031469955097mer-1a146995485146995509143-13.25
CAediting_93097chr1_146995367_+ENSG00000268043.6ENST00000579935hsa-miR-544a1469953601469953667mer-m8146995346146995367149-9.07
CAediting_93106chr1_146995654_+ENSG00000268043.6ENST00000579935hsa-miR-561-3p1469956521469956587mer-m8146995637146995659151-7.49
CAediting_93107chr1_146995655_+ENSG00000268043.6ENST00000579935hsa-miR-561-3p1469956521469956587mer-m8146995637146995659151-7.49
CAediting_93101chr1_146995599_+ENSG00000268043.6ENST00000579935hsa-miR-6807-5p1469955921469955998mer-1a146995578146995599153-20.98
CAediting_93098chr1_146995417_+ENSG00000268043.6ENST00000579935hsa-miR-80761469954111469954177mer-m8146995396146995418155-12.69

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_393chr1_1167164_+ENSG00000268043.6ENST00000617931hsa-miR-200b-3p1469951801469951867mer-m8146995166146995187149-11.59
CAediting_393chr1_1167164_+ENSG00000268043.6ENST00000617844hsa-miR-200b-3p1469951801469951867mer-m8146995166146995187149-11.59
CAediting_393chr1_1167164_+ENSG00000268043.6ENST00000611443hsa-miR-200b-3p1469951801469951867mer-m8146995166146995187149-11.59
CAediting_393chr1_1167164_+ENSG00000268043.6ENST00000617614hsa-miR-200b-3p1469951801469951867mer-m8146995166146995187149-11.59
CAediting_393chr1_1167164_+ENSG00000268043.6ENST00000579935hsa-miR-200b-3p1469951801469951867mer-m8146995166146995187149-11.59
CAediting_1229413chr17_67471544_+ENSG00000268043.6ENST00000617931hsa-miR-548aa1469949561469949638mer-1a146994937146994963157-16.24
CAediting_1351755chr19_40282625_-ENSG00000268043.6ENST00000617931hsa-miR-6411469948841469948907mer-m8146994862146994891144-19.81
CAediting_1229413chr17_67471544_+ENSG00000268043.6ENST00000617844hsa-miR-548aa1469949561469949638mer-1a146994937146994963157-16.24
CAediting_1351755chr19_40282625_-ENSG00000268043.6ENST00000617844hsa-miR-6411469948841469948907mer-m8146994862146994891144-19.81
CAediting_1229413chr17_67471544_+ENSG00000268043.6ENST00000611443hsa-miR-548aa1469949561469949638mer-1a146994937146994963157-16.24
CAediting_1351755chr19_40282625_-ENSG00000268043.6ENST00000611443hsa-miR-6411469948841469948907mer-m8146994862146994891144-19.81
CAediting_1229413chr17_67471544_+ENSG00000268043.6ENST00000617614hsa-miR-548aa1469949561469949638mer-1a146994937146994963157-16.24
CAediting_1229414chr17_67471546_+ENSG00000268043.6ENST00000617614hsa-miR-548aa1469945401469945467mer-m8146994522146994547146-18.12
CAediting_1351755chr19_40282625_-ENSG00000268043.6ENST00000617614hsa-miR-6411469948841469948907mer-m8146994862146994891144-19.81
CAediting_1229415chr17_67471547_+ENSG00000268043.6ENST00000617864hsa-miR-548aa1469881031469881097mer-m8146988087146988110153-14.49
CAediting_1229414chr17_67471546_+ENSG00000268043.6ENST00000617864hsa-miR-548aa1469945401469945467mer-m8146994522146994547146-18.12
CAediting_1229413chr17_67471544_+ENSG00000268043.6ENST00000579935hsa-miR-548aa1469949561469949638mer-1a146994937146994963157-16.24
CAediting_1351755chr19_40282625_-ENSG00000268043.6ENST00000579935hsa-miR-6411469948841469948907mer-m8146994862146994891144-19.81

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1229413chr17_67471544_+ENSG00000268043.6ENST00000617931hsa-miR-548aa1469961501469961567mer-m8146996135146996157143-6.51
CAediting_1351755chr19_40282625_-ENSG00000268043.6ENST00000617931hsa-miR-6411469956271469956337mer-m8146995608146995634147-15.43
CAediting_1351755chr19_40282625_-ENSG00000268043.6ENST00000617844hsa-miR-6411469956271469956337mer-m8146995608146995634147-15.43
CAediting_1351755chr19_40282625_-ENSG00000268043.6ENST00000611443hsa-miR-6411469956271469956337mer-m8146995608146995634147-15.43
CAediting_1229413chr17_67471544_+ENSG00000268043.6ENST00000617614hsa-miR-548aa1469961501469961567mer-m8146996135146996157143-6.51
CAediting_1229414chr17_67471546_+ENSG00000268043.6ENST00000617614hsa-miR-548aa1469961501469961567mer-m8146996135146996157143-6.51
CAediting_1351755chr19_40282625_-ENSG00000268043.6ENST00000617614hsa-miR-6411469956271469956337mer-m8146995608146995634147-15.43
CAediting_1229413chr17_67471544_+ENSG00000268043.6ENST00000579935hsa-miR-548aa1469961501469961567mer-m8146996135146996157143-6.51
CAediting_1351755chr19_40282625_-ENSG00000268043.6ENST00000579935hsa-miR-6411469956271469956337mer-m8146995608146995634147-15.43

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for NBPF12

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.
ENST00000617931.3protein_codingSoverviewSoverview
ENST00000611443.3protein_codingSoverviewSoverview
ENST00000617844.3protein_codingSoverviewSoverview
ENST00000579935.7protein_codingSoverviewSoverview
ENST00000617614.3protein_codingSoverviewSoverview

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI
CAediting_93097ENST00000617931.3chr1_146995367_+-2328.50-2328.50-2346.00
CAediting_93098ENST00000617931.3chr1_146995417_+-2334.70-2328.50-2346.00
CAediting_93099ENST00000617931.3chr1_146995504_+-2328.50-2328.50-2346.00
CAediting_93100ENST00000617931.3chr1_146995586_+-2327.80-2328.50-2346.00
CAediting_93101ENST00000617931.3chr1_146995599_+-2327.80-2328.50-2346.00
CAediting_93102ENST00000617931.3chr1_146995600_+-2334.70-2328.50-2346.00
CAediting_93103ENST00000617931.3chr1_146995607_+-2328.50-2328.50-2346.00
CAediting_93104ENST00000617931.3chr1_146995616_+-2328.70-2328.50-2346.00
CAediting_93105ENST00000617931.3chr1_146995653_+-2328.60-2328.50-2346.00
CAediting_93106ENST00000617931.3chr1_146995654_+-2328.20-2328.50-2346.00
CAediting_93107ENST00000617931.3chr1_146995655_+-2335.20-2328.50-2346.00
CAediting_93108ENST00000617931.3chr1_146995931_+-2328.80-2328.50-2346.00
CAediting_93097ENST00000611443.3chr1_146995367_+-1807.60-1807.60-1825.10
CAediting_93098ENST00000611443.3chr1_146995417_+-1813.80-1807.60-1825.10
CAediting_93099ENST00000611443.3chr1_146995504_+-1807.60-1807.60-1825.10
CAediting_93100ENST00000611443.3chr1_146995586_+-1806.90-1807.60-1825.10
CAediting_93101ENST00000611443.3chr1_146995599_+-1806.90-1807.60-1825.10
CAediting_93102ENST00000611443.3chr1_146995600_+-1813.80-1807.60-1825.10
CAediting_93103ENST00000611443.3chr1_146995607_+-1807.60-1807.60-1825.10
CAediting_93104ENST00000611443.3chr1_146995616_+-1807.80-1807.60-1825.10
CAediting_93105ENST00000611443.3chr1_146995653_+-1807.70-1807.60-1825.10
CAediting_93106ENST00000611443.3chr1_146995654_+-1807.30-1807.60-1825.10
CAediting_93107ENST00000611443.3chr1_146995655_+-1814.30-1807.60-1825.10
CAediting_93108ENST00000611443.3chr1_146995931_+-1807.90-1807.60-1825.10
CAediting_93097ENST00000617844.3chr1_146995367_+-2049.00-2049.00-2066.50
CAediting_93098ENST00000617844.3chr1_146995417_+-2055.20-2049.00-2066.50
CAediting_93099ENST00000617844.3chr1_146995504_+-2049.00-2049.00-2066.50
CAediting_93100ENST00000617844.3chr1_146995586_+-2048.30-2049.00-2066.50
CAediting_93101ENST00000617844.3chr1_146995599_+-2048.30-2049.00-2066.50
CAediting_93102ENST00000617844.3chr1_146995600_+-2055.20-2049.00-2066.50
CAediting_93103ENST00000617844.3chr1_146995607_+-2049.00-2049.00-2066.50
CAediting_93104ENST00000617844.3chr1_146995616_+-2049.20-2049.00-2066.50
CAediting_93105ENST00000617844.3chr1_146995653_+-2049.10-2049.00-2066.50
CAediting_93106ENST00000617844.3chr1_146995654_+-2048.70-2049.00-2066.50
CAediting_93107ENST00000617844.3chr1_146995655_+-2055.70-2049.00-2066.50
CAediting_93108ENST00000617844.3chr1_146995931_+-2049.30-2049.00-2066.50
CAediting_93097ENST00000579935.7chr1_146995367_+-1630.90-1630.90-1648.40
CAediting_93098ENST00000579935.7chr1_146995417_+-1637.10-1630.90-1648.40
CAediting_93099ENST00000579935.7chr1_146995504_+-1630.90-1630.90-1648.40
CAediting_93100ENST00000579935.7chr1_146995586_+-1630.20-1630.90-1648.40
CAediting_93101ENST00000579935.7chr1_146995599_+-1630.20-1630.90-1648.40
CAediting_93102ENST00000579935.7chr1_146995600_+-1637.10-1630.90-1648.40
CAediting_93103ENST00000579935.7chr1_146995607_+-1630.90-1630.90-1648.40
CAediting_93104ENST00000579935.7chr1_146995616_+-1631.10-1630.90-1648.40
CAediting_93105ENST00000579935.7chr1_146995653_+-1631.00-1630.90-1648.40
CAediting_93106ENST00000579935.7chr1_146995654_+-1630.60-1630.90-1648.40
CAediting_93107ENST00000579935.7chr1_146995655_+-1637.60-1630.90-1648.40
CAediting_93108ENST00000579935.7chr1_146995931_+-1631.20-1630.90-1648.40
CAediting_93097ENST00000617614.3chr1_146995367_+-1492.20-1492.20-1509.70
CAediting_93098ENST00000617614.3chr1_146995417_+-1498.40-1492.20-1509.70
CAediting_93099ENST00000617614.3chr1_146995504_+-1492.20-1492.20-1509.70
CAediting_93100ENST00000617614.3chr1_146995586_+-1491.50-1492.20-1509.70
CAediting_93101ENST00000617614.3chr1_146995599_+-1491.50-1492.20-1509.70
CAediting_93102ENST00000617614.3chr1_146995600_+-1498.40-1492.20-1509.70
CAediting_93103ENST00000617614.3chr1_146995607_+-1492.20-1492.20-1509.70
CAediting_93104ENST00000617614.3chr1_146995616_+-1492.40-1492.20-1509.70
CAediting_93105ENST00000617614.3chr1_146995653_+-1492.30-1492.20-1509.70
CAediting_93106ENST00000617614.3chr1_146995654_+-1491.90-1492.20-1509.70
CAediting_93107ENST00000617614.3chr1_146995655_+-1498.90-1492.20-1509.70
CAediting_93108ENST00000617614.3chr1_146995931_+-1492.50-1492.20-1509.70

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Relation with ADAR for NBPF12

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
BLCACAediting_93102chr1_146995600_+2.25030703466742e-050.460135303307968....
LGGCAediting_93102chr1_146995600_+0.009169121740075960.181583676984836..0.001105607020882610.226261721905103
BRCACAediting_93102chr1_146995600_+9.28977173998733e-070.271852833389668....
LIHCCAediting_93102chr1_146995600_+3.91072605665243e-050.359110442544332....
LUADCAediting_93102chr1_146995600_+0.00015000700690790.443832456822686....
GBMCAediting_93102chr1_146995600_+6.74212151329938e-090.451379320260852....
PRADCAediting_93102chr1_146995600_+0.02925445240058060.264543973610559....
STADCAediting_93102chr1_146995600_+0.000127521853907040.252116405682328....
THCACAediting_93102chr1_146995600_+0.0008994600822103010.249510715100524....
ESCACAediting_93102chr1_146995600_+0.0005259714520939550.286356366235930.002618120414775140.24984329592761..
OVCAediting_93102chr1_146995600_+8.36769964383084e-090.306893810626259....
TGCTCAediting_93102chr1_146995600_+2.93885087883025e-090.543706054227482....
THYMCAediting_93102chr1_146995600_+0.001310367450276880.374086451703097....

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Relation with cancer stages for NBPF12

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.
STADpathologic_stageCAediting_93058chr1_146941709_+0.03967412624780470.239718258084727

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Relation with survival for NBPF12

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for NBPF12

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for NBPF12

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource