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Editing gene: ATP8B3 (CAeditome ID:148229)

Gene summary for ATP8B3

Gene summary

Gene information	Gene symbol	ATP8B3
	Gene ID	148229
	Gene name	ATPase phospholipid transporting 8B3
	Synonyms	ATPIK
	Cytomap	19p13.3
	Type of gene	protein-coding
	Description	phospholipid-transporting ATPase IKATPase, aminophospholipid transporter, class I, type 8B, member 3ATPase, class I, type 8B, member 3aminophospholipid translocase ATP8B3potential phospholipid-transporting ATPase IKprobable phospholipid-transporting
	Modification date	20210518
	UniProtAcc	O60423
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for ATP8B3

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000130270.15

RNA A-to-I editing events in Cancer.

CAediting_1272047(1783932, -), CAediting_1272048(1783949, -), CAediting_1272049(1783972, -), CAediting_1272050(1783973, -), CAediting_1272051(1784431, -), CAediting_1272052(1784468, -), CAediting_1272053(1797535, -), CAediting_1272054(1797572, -), CAediting_1272055(1797592, -), CAediting_1272056(1797596, -), CAediting_1272057(1797611, -), CAediting_1272058(1797628, -), CAediting_1272059(1797632, -), CAediting_1272060(1797637, -), CAediting_1272061(1797638, -), CAediting_1272062(1797645, -), CAediting_1272063(1797668, -), CAediting_1272064(1797673, -), CAediting_1272065(1797678, -), CAediting_1272066(1797679, -), CAediting_1272067(1797682, -), CAediting_1272068(1797688, -), CAediting_1272069(1797693, -), CAediting_1272070(1797713, -), CAediting_1272071(1797737, -), CAediting_1272072(1797767, -), CAediting_1272073(1797772, -), CAediting_1272074(1797781, -), CAediting_1272075(1797801, -), CAediting_1272076(1797802, -), CAediting_1272077(1797811, -), CAediting_1272078(1797835, -), CAediting_1272079(1797852, -), CAediting_1272080(1797865, -), CAediting_1272081(1797870, -), CAediting_1272082(1797873, -), CAediting_1272083(1797877, -), CAediting_1272084(1797881, -), CAediting_1272085(1797902, -), CAediting_1272086(1797912, -), CAediting_1272087(1797917, -), CAediting_1272088(1797919, -), CAediting_1272089(1797920, -), CAediting_1272090(1797926, -), CAediting_1272091(1797927, -), CAediting_1272092(1797937, -), CAediting_1272093(1797949, -), CAediting_1272094(1798004, -), CAediting_1272095(1798029, -), CAediting_1272096(1798034, -), CAediting_1272097(1798039, -), CAediting_1272098(1798044, -), CAediting_1272099(1798048, -), CAediting_1272100(1798067, -), CAediting_1272101(1798082, -), CAediting_1272102(1798095, -), CAediting_1272103(1798099, -), CAediting_1272104(1798174, -), CAediting_1272105(1798175, -), CAediting_1272106(1798198, -), CAediting_1272107(1798203, -), CAediting_1272108(1798208, -), CAediting_1272109(1798482, -), CAediting_1272110(1798549, -), CAediting_1272111(1798675, -), CAediting_1272112(1798886, -), CAediting_1272113(1798895, -), CAediting_1272114(1798925, -), CAediting_1272115(1798960, -), CAediting_1272116(1798975, -), CAediting_1272117(1798999, -), CAediting_1272118(1799021, -), CAediting_1272119(1799031, -), CAediting_1272120(1799034, -), CAediting_1272121(1799035, -), CAediting_1272122(1799043, -), CAediting_1272123(1799048, -), CAediting_1272124(1799057, -), CAediting_1272125(1799060, -), CAediting_1272126(1799091, -), CAediting_1272127(1799097, -), CAediting_1272128(1799105, -), CAediting_1272129(1799109, -), CAediting_1272130(1799139, -), CAediting_1272131(1799141, -), CAediting_1272132(1799153, -), CAediting_1272133(1799214, -), CAediting_1272134(1799241, -), CAediting_1272135(1799315, -), CAediting_1272136(1799329, -), CAediting_1272137(1799340, -), CAediting_1272138(1799342, -), CAediting_1272139(1799352, -), CAediting_1272140(1799355, -), CAediting_1272141(1799356, -), CAediting_1272142(1799364, -), CAediting_1272143(1799397, -), CAediting_1272144(1799402, -), CAediting_1272145(1799509, -), CAediting_1272146(1799521, -), CAediting_1272147(1799522, -), CAediting_1272148(1799540, -), CAediting_1272149(1799586, -), CAediting_1272150(1799624, -), CAediting_1272151(1799642, -), CAediting_1272152(1799652, -), CAediting_1272153(1799655, -), CAediting_1272154(1799681, -), CAediting_1272155(1799682, -), CAediting_1272156(1799688, -), CAediting_1272157(1799718, -), CAediting_1272158(1799726, -), CAediting_1272159(1799730, -), CAediting_1272160(1799731, -), CAediting_1272161(1809204, -), CAediting_1272162(1809226, -),

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RNA editing positional annotations for ATP8B3 using Annovar

Protein coding RNA editing(s).

CAeditome ID	Position	Variant type	ENST	NTchange	AAchange	SIFT_score	Polyphen2_HVAR_score	PROVEAN_pred
CAediting_1272153	chr19_1799655_-	nonsynonymous SNV	ENST00000526092.5	c.A1685G	p.E562G	D	P	N
CAediting_1272155	chr19_1799682_-	nonsynonymous SNV	ENST00000526092.5	c.A1658G	p.Q553R	D	B	N
CAediting_1272156	chr19_1799688_-	nonsynonymous SNV	ENST00000526092.5	c.A1652G	p.Q551R	D	B	N
CAediting_1272157	chr19_1799718_-	nonsynonymous SNV	ENST00000526092.5	c.A1622G	p.Q541R	D	B	N
CAediting_1272159	chr19_1799730_-	nonsynonymous SNV	ENST00000526092.5	c.A1610G	p.N537S	D	P	N

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1272047	chr19_1783932_-	intronic
CAediting_1272048	chr19_1783949_-	intronic
CAediting_1272049	chr19_1783972_-	intronic
CAediting_1272050	chr19_1783973_-	intronic
CAediting_1272051	chr19_1784431_-	intronic
CAediting_1272052	chr19_1784468_-	intronic
CAediting_1272053	chr19_1797535_-	intronic
CAediting_1272054	chr19_1797572_-	intronic
CAediting_1272055	chr19_1797592_-	intronic
CAediting_1272056	chr19_1797596_-	intronic
CAediting_1272057	chr19_1797611_-	intronic
CAediting_1272058	chr19_1797628_-	intronic
CAediting_1272059	chr19_1797632_-	intronic
CAediting_1272060	chr19_1797637_-	intronic
CAediting_1272061	chr19_1797638_-	intronic
CAediting_1272062	chr19_1797645_-	intronic
CAediting_1272063	chr19_1797668_-	intronic
CAediting_1272064	chr19_1797673_-	intronic
CAediting_1272065	chr19_1797678_-	intronic
CAediting_1272066	chr19_1797679_-	intronic
CAediting_1272067	chr19_1797682_-	intronic
CAediting_1272068	chr19_1797688_-	intronic
CAediting_1272069	chr19_1797693_-	intronic
CAediting_1272070	chr19_1797713_-	intronic
CAediting_1272071	chr19_1797737_-	intronic
CAediting_1272072	chr19_1797767_-	intronic
CAediting_1272073	chr19_1797772_-	intronic
CAediting_1272074	chr19_1797781_-	intronic
CAediting_1272075	chr19_1797801_-	intronic
CAediting_1272076	chr19_1797802_-	intronic
CAediting_1272077	chr19_1797811_-	intronic
CAediting_1272078	chr19_1797835_-	intronic
CAediting_1272079	chr19_1797852_-	intronic
CAediting_1272080	chr19_1797865_-	intronic
CAediting_1272081	chr19_1797870_-	intronic
CAediting_1272082	chr19_1797873_-	intronic
CAediting_1272083	chr19_1797877_-	intronic
CAediting_1272084	chr19_1797881_-	intronic
CAediting_1272085	chr19_1797902_-	intronic
CAediting_1272086	chr19_1797912_-	intronic
CAediting_1272087	chr19_1797917_-	intronic
CAediting_1272088	chr19_1797919_-	intronic
CAediting_1272089	chr19_1797920_-	intronic
CAediting_1272090	chr19_1797926_-	intronic
CAediting_1272091	chr19_1797927_-	intronic
CAediting_1272092	chr19_1797937_-	intronic
CAediting_1272093	chr19_1797949_-	intronic
CAediting_1272094	chr19_1798004_-	intronic
CAediting_1272095	chr19_1798029_-	intronic
CAediting_1272096	chr19_1798034_-	intronic
CAediting_1272097	chr19_1798039_-	intronic
CAediting_1272098	chr19_1798044_-	intronic
CAediting_1272099	chr19_1798048_-	intronic
CAediting_1272100	chr19_1798067_-	intronic
CAediting_1272101	chr19_1798082_-	intronic
CAediting_1272102	chr19_1798095_-	intronic
CAediting_1272103	chr19_1798099_-	intronic
CAediting_1272104	chr19_1798174_-	intronic
CAediting_1272105	chr19_1798175_-	intronic
CAediting_1272106	chr19_1798198_-	intronic
CAediting_1272107	chr19_1798203_-	intronic
CAediting_1272108	chr19_1798208_-	intronic
CAediting_1272109	chr19_1798482_-	intronic
CAediting_1272110	chr19_1798549_-	intronic
CAediting_1272111	chr19_1798675_-	intronic
CAediting_1272112	chr19_1798886_-	ncRNA_exonic
CAediting_1272113	chr19_1798895_-	ncRNA_exonic
CAediting_1272114	chr19_1798925_-	ncRNA_exonic
CAediting_1272115	chr19_1798960_-	ncRNA_exonic
CAediting_1272116	chr19_1798975_-	ncRNA_exonic
CAediting_1272117	chr19_1798999_-	ncRNA_exonic
CAediting_1272118	chr19_1799021_-	ncRNA_exonic
CAediting_1272119	chr19_1799031_-	ncRNA_exonic
CAediting_1272120	chr19_1799034_-	ncRNA_exonic
CAediting_1272121	chr19_1799035_-	ncRNA_exonic
CAediting_1272122	chr19_1799043_-	ncRNA_exonic
CAediting_1272123	chr19_1799048_-	ncRNA_exonic
CAediting_1272124	chr19_1799057_-	ncRNA_exonic
CAediting_1272125	chr19_1799060_-	ncRNA_exonic
CAediting_1272126	chr19_1799091_-	ncRNA_exonic
CAediting_1272127	chr19_1799097_-	ncRNA_exonic
CAediting_1272128	chr19_1799105_-	ncRNA_exonic
CAediting_1272129	chr19_1799109_-	ncRNA_exonic
CAediting_1272130	chr19_1799139_-	ncRNA_exonic
CAediting_1272131	chr19_1799141_-	ncRNA_exonic
CAediting_1272132	chr19_1799153_-	ncRNA_exonic
CAediting_1272133	chr19_1799214_-	ncRNA_exonic
CAediting_1272134	chr19_1799241_-	ncRNA_exonic
CAediting_1272135	chr19_1799315_-	ncRNA_exonic
CAediting_1272136	chr19_1799329_-	ncRNA_exonic
CAediting_1272137	chr19_1799340_-	ncRNA_exonic
CAediting_1272138	chr19_1799342_-	ncRNA_exonic
CAediting_1272139	chr19_1799352_-	ncRNA_exonic
CAediting_1272140	chr19_1799355_-	ncRNA_exonic
CAediting_1272141	chr19_1799356_-	ncRNA_exonic
CAediting_1272142	chr19_1799364_-	ncRNA_exonic
CAediting_1272143	chr19_1799397_-	ncRNA_exonic
CAediting_1272144	chr19_1799402_-	ncRNA_exonic
CAediting_1272145	chr19_1799509_-	ncRNA_exonic
CAediting_1272146	chr19_1799521_-	ncRNA_exonic
CAediting_1272147	chr19_1799522_-	ncRNA_exonic
CAediting_1272148	chr19_1799540_-	ncRNA_exonic
CAediting_1272149	chr19_1799586_-	ncRNA_exonic
CAediting_1272150	chr19_1799624_-	ncRNA_exonic
CAediting_1272151	chr19_1799642_-	ncRNA_exonic
CAediting_1272152	chr19_1799652_-	exonic
CAediting_1272153	chr19_1799655_-	exonic
CAediting_1272154	chr19_1799681_-	exonic
CAediting_1272155	chr19_1799682_-	exonic
CAediting_1272156	chr19_1799688_-	exonic
CAediting_1272157	chr19_1799718_-	exonic
CAediting_1272158	chr19_1799726_-	exonic
CAediting_1272159	chr19_1799730_-	exonic
CAediting_1272160	chr19_1799731_-	exonic
CAediting_1272161	chr19_1809204_-	ncRNA_intronic
CAediting_1272162	chr19_1809226_-	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1272047	chr19_1783932_-	SINE	Alu	FRAM
CAediting_1272048	chr19_1783949_-	SINE	Alu	FRAM
CAediting_1272049	chr19_1783972_-	SINE	Alu	FRAM
CAediting_1272050	chr19_1783973_-	SINE	Alu	FRAM
CAediting_1272051	chr19_1784431_-	SINE	Alu	AluJb
CAediting_1272052	chr19_1784468_-	SINE	Alu	AluJb
CAediting_1272053	chr19_1797535_-	SINE	Alu	AluSz
CAediting_1272054	chr19_1797572_-	SINE	Alu	AluSz
CAediting_1272055	chr19_1797592_-	SINE	Alu	AluSz
CAediting_1272056	chr19_1797596_-	SINE	Alu	AluSz
CAediting_1272057	chr19_1797611_-	SINE	Alu	AluSz
CAediting_1272058	chr19_1797628_-	SINE	Alu	AluSz
CAediting_1272059	chr19_1797632_-	SINE	Alu	AluSz
CAediting_1272060	chr19_1797637_-	SINE	Alu	AluSz
CAediting_1272061	chr19_1797638_-	SINE	Alu	AluSz
CAediting_1272062	chr19_1797645_-	SINE	Alu	AluSz
CAediting_1272063	chr19_1797668_-	SINE	Alu	AluSz
CAediting_1272064	chr19_1797673_-	SINE	Alu	AluSz
CAediting_1272065	chr19_1797678_-	SINE	Alu	AluSz
CAediting_1272066	chr19_1797679_-	SINE	Alu	AluSz
CAediting_1272067	chr19_1797682_-	SINE	Alu	AluSz
CAediting_1272068	chr19_1797688_-	SINE	Alu	AluSz
CAediting_1272069	chr19_1797693_-	SINE	Alu	AluSz
CAediting_1272070	chr19_1797713_-	SINE	Alu	AluSz
CAediting_1272071	chr19_1797737_-	SINE	Alu	AluSz
CAediting_1272072	chr19_1797767_-	SINE	Alu	AluSz
CAediting_1272073	chr19_1797772_-	SINE	Alu	AluSz
CAediting_1272074	chr19_1797781_-	SINE	Alu	AluSz
CAediting_1272075	chr19_1797801_-	SINE	Alu	FRAM
CAediting_1272076	chr19_1797802_-	SINE	Alu	FRAM
CAediting_1272077	chr19_1797811_-	SINE	Alu	FRAM
CAediting_1272078	chr19_1797835_-	SINE	Alu	FRAM
CAediting_1272079	chr19_1797852_-	SINE	Alu	FRAM
CAediting_1272080	chr19_1797865_-	SINE	Alu	FRAM
CAediting_1272081	chr19_1797870_-	SINE	Alu	FRAM
CAediting_1272082	chr19_1797873_-	SINE	Alu	FRAM
CAediting_1272083	chr19_1797877_-	SINE	Alu	FRAM
CAediting_1272084	chr19_1797881_-	SINE	Alu	FRAM
CAediting_1272085	chr19_1797902_-	SINE	Alu	FRAM
CAediting_1272086	chr19_1797912_-	SINE	Alu	FRAM
CAediting_1272087	chr19_1797917_-	SINE	Alu	FRAM
CAediting_1272088	chr19_1797919_-	SINE	Alu	FRAM
CAediting_1272089	chr19_1797920_-	SINE	Alu	FRAM
CAediting_1272090	chr19_1797926_-	SINE	Alu	FRAM
CAediting_1272091	chr19_1797927_-	SINE	Alu	FRAM
CAediting_1272092	chr19_1797937_-	SINE	Alu	FRAM
CAediting_1272093	chr19_1797949_-	SINE	Alu	FRAM
CAediting_1272094	chr19_1798004_-	SINE	Alu	AluSx1
CAediting_1272095	chr19_1798029_-	SINE	Alu	AluSx1
CAediting_1272096	chr19_1798034_-	SINE	Alu	AluSx1
CAediting_1272097	chr19_1798039_-	SINE	Alu	AluSx1
CAediting_1272098	chr19_1798044_-	SINE	Alu	AluSx1
CAediting_1272099	chr19_1798048_-	SINE	Alu	AluSx1
CAediting_1272100	chr19_1798067_-	SINE	Alu	AluSx1
CAediting_1272101	chr19_1798082_-	SINE	Alu	AluSx1
CAediting_1272102	chr19_1798095_-	SINE	Alu	AluSx1
CAediting_1272103	chr19_1798099_-	SINE	Alu	AluSx1
CAediting_1272104	chr19_1798174_-	SINE	Alu	AluSx1
CAediting_1272105	chr19_1798175_-	SINE	Alu	AluSx1
CAediting_1272106	chr19_1798198_-	SINE	Alu	AluSx1
CAediting_1272107	chr19_1798203_-	SINE	Alu	AluSx1
CAediting_1272108	chr19_1798208_-	SINE	Alu	AluSx1
CAediting_1272109	chr19_1798482_-	SINE	Alu	AluY
CAediting_1272110	chr19_1798549_-	SINE	Alu	AluY
CAediting_1272111	chr19_1798675_-	SINE	Alu	AluY
CAediting_1272112	chr19_1798886_-	SINE	Alu	AluJo
CAediting_1272113	chr19_1798895_-	SINE	Alu	AluJo
CAediting_1272114	chr19_1798925_-	SINE	Alu	AluJo
CAediting_1272115	chr19_1798960_-	SINE	Alu	AluJo
CAediting_1272116	chr19_1798975_-	SINE	Alu	AluJo
CAediting_1272117	chr19_1798999_-	SINE	Alu	AluJo
CAediting_1272118	chr19_1799021_-	SINE	Alu	AluJo
CAediting_1272119	chr19_1799031_-	SINE	Alu	AluJo
CAediting_1272120	chr19_1799034_-	SINE	Alu	AluJo
CAediting_1272121	chr19_1799035_-	SINE	Alu	AluJo
CAediting_1272122	chr19_1799043_-	SINE	Alu	AluJo
CAediting_1272123	chr19_1799048_-	SINE	Alu	AluJo
CAediting_1272124	chr19_1799057_-	SINE	Alu	AluJo
CAediting_1272125	chr19_1799060_-	SINE	Alu	AluJo
CAediting_1272126	chr19_1799091_-	SINE	Alu	AluJo
CAediting_1272127	chr19_1799097_-	SINE	Alu	AluJo
CAediting_1272128	chr19_1799105_-	SINE	Alu	AluJo
CAediting_1272129	chr19_1799109_-	SINE	Alu	AluJo
CAediting_1272130	chr19_1799139_-	SINE	Alu	AluJo
CAediting_1272131	chr19_1799141_-	SINE	Alu	AluJo
CAediting_1272132	chr19_1799153_-	SINE	Alu	AluJo
CAediting_1272133	chr19_1799214_-	SINE	Alu	AluSq
CAediting_1272134	chr19_1799241_-	SINE	Alu	AluSq
CAediting_1272135	chr19_1799315_-	SINE	Alu	AluSq
CAediting_1272136	chr19_1799329_-	SINE	Alu	AluSq
CAediting_1272137	chr19_1799340_-	SINE	Alu	AluSq
CAediting_1272138	chr19_1799342_-	SINE	Alu	AluSq
CAediting_1272139	chr19_1799352_-	SINE	Alu	AluSq
CAediting_1272140	chr19_1799355_-	SINE	Alu	AluSq
CAediting_1272141	chr19_1799356_-	SINE	Alu	AluSq
CAediting_1272142	chr19_1799364_-	SINE	Alu	AluSq
CAediting_1272143	chr19_1799397_-	SINE	Alu	AluSq
CAediting_1272144	chr19_1799402_-	SINE	Alu	AluSq
CAediting_1272145	chr19_1799509_-	SINE	Alu	AluSx1
CAediting_1272146	chr19_1799521_-	SINE	Alu	AluSx1
CAediting_1272147	chr19_1799522_-	SINE	Alu	AluSx1
CAediting_1272148	chr19_1799540_-	SINE	Alu	AluSx1
CAediting_1272149	chr19_1799586_-	SINE	Alu	AluSx1
CAediting_1272150	chr19_1799624_-	SINE	Alu	AluSx1
CAediting_1272151	chr19_1799642_-	SINE	Alu	AluSx1
CAediting_1272152	chr19_1799652_-	SINE	Alu	AluSx1
CAediting_1272153	chr19_1799655_-	SINE	Alu	AluSx1
CAediting_1272154	chr19_1799681_-	SINE	Alu	AluSx1
CAediting_1272155	chr19_1799682_-	SINE	Alu	AluSx1
CAediting_1272156	chr19_1799688_-	SINE	Alu	AluSx1
CAediting_1272157	chr19_1799718_-	SINE	Alu	AluSx1
CAediting_1272158	chr19_1799726_-	SINE	Alu	AluSx1
CAediting_1272159	chr19_1799730_-	SINE	Alu	AluSx1
CAediting_1272160	chr19_1799731_-	SINE	Alu	AluSx1
CAediting_1272161	chr19_1809204_-	SINE	Alu	AluSx
CAediting_1272162	chr19_1809226_-	SINE	Alu	AluSx

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RNA A-to-I editing events in the alternative splicing sites for ATP8B3

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000130270.15.ATP8B3.

Correlation between RNA A-to-I editing and PSI for ENSG00000130270.15.ATP8B3.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for ATP8B3

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for ATP8B3

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for ATP8B3

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1272119	chr19_1799031_-	ENSG00000130270.15	ENST00000526092	hsa-miR-3614-5p	1799031	1799037	7mer-m8	1799030	1799054	159.00	-24.05
CAediting_1272141	chr19_1799356_-	ENSG00000130270.15	ENST00000526092	hsa-miR-6771-5p	1799355	1799361	7mer-m8	1799354	1799373	152.00	-29.76
CAediting_1272115	chr19_1798960_-	ENSG00000130270.15	ENST00000526092	hsa-miR-6768-5p	1798957	1798963	7mer-m8	1798956	1798978	142.00	-21.85
CAediting_1272118	chr19_1799021_-	ENSG00000130270.15	ENST00000526092	hsa-miR-17-3p	1799018	1799024	7mer-m8	1799017	1799039	162.00	-22.97
CAediting_1272120	chr19_1799034_-	ENSG00000130270.15	ENST00000526092	hsa-miR-204-3p	1799034	1799040	7mer-m8	1799033	1799053	153.00	-19.41
CAediting_1272120	chr19_1799034_-	ENSG00000130270.15	ENST00000526092	hsa-miR-3192-5p	1799034	1799039	6mer	1799033	1799055	149.00	-29.01
CAediting_1272120	chr19_1799034_-	ENSG00000130270.15	ENST00000526092	hsa-miR-6852-5p	1799033	1799038	6mer	1799032	1799052	144.00	-24.25
CAediting_1272121	chr19_1799035_-	ENSG00000130270.15	ENST00000526092	hsa-miR-425-3p	1799034	1799040	7mer-m8	1799033	1799056	146.00	-15.07
CAediting_1272125	chr19_1799060_-	ENSG00000130270.15	ENST00000526092	hsa-miR-1199-5p	1799060	1799066	7mer-m8	1799059	1799078	156.00	-31.03
CAediting_1272125	chr19_1799060_-	ENSG00000130270.15	ENST00000526092	hsa-miR-6751-3p	1799060	1799066	7mer-m8	1799059	1799079	141.00	-13.48
CAediting_1272129	chr19_1799109_-	ENSG00000130270.15	ENST00000526092	hsa-miR-4793-3p	1799104	1799110	7mer-m8	1799103	1799125	157.00	-25.43
CAediting_1272129	chr19_1799109_-	ENSG00000130270.15	ENST00000526092	hsa-miR-508-5p	1799108	1799114	7mer-m8	1799107	1799131	156.00	-25.92
CAediting_1272129	chr19_1799109_-	ENSG00000130270.15	ENST00000526092	hsa-miR-766-3p	1799109	1799115	7mer-m8	1799108	1799129	145.00	-21.87
CAediting_1272129	chr19_1799109_-	ENSG00000130270.15	ENST00000526092	hsa-miR-7703	1799105	1799111	7mer-m8	1799104	1799126	162.00	-26.23
CAediting_1272131	chr19_1799141_-	ENSG00000130270.15	ENST00000526092	hsa-miR-4733-5p	1799138	1799144	7mer-m8	1799137	1799159	142.00	-9.15
CAediting_1272132	chr19_1799153_-	ENSG00000130270.15	ENST00000526092	hsa-miR-7-1-3p	1799151	1799157	7mer-m8	1799150	1799172	155.00	-12.77
CAediting_1272132	chr19_1799153_-	ENSG00000130270.15	ENST00000526092	hsa-miR-7-2-3p	1799151	1799157	7mer-m8	1799150	1799172	147.00	-5.02
CAediting_1272133	chr19_1799214_-	ENSG00000130270.15	ENST00000526092	hsa-miR-432-5p	1799213	1799220	8mer-1a	1799213	1799238	143.00	-20.90
CAediting_1272135	chr19_1799315_-	ENSG00000130270.15	ENST00000526092	hsa-miR-548ae-3p	1799310	1799316	7mer-m8	1799309	1799330	143.00	-10.65
CAediting_1272135	chr19_1799315_-	ENSG00000130270.15	ENST00000526092	hsa-miR-548ae-3p	1799310	1799316	7mer-m8	1799309	1799330	143.00	-10.65
CAediting_1272135	chr19_1799315_-	ENSG00000130270.15	ENST00000526092	hsa-miR-548ah-3p	1799310	1799316	7mer-m8	1799309	1799328	144.00	-11.65
CAediting_1272135	chr19_1799315_-	ENSG00000130270.15	ENST00000526092	hsa-miR-548aj-3p	1799310	1799316	7mer-m8	1799309	1799330	143.00	-8.54
CAediting_1272135	chr19_1799315_-	ENSG00000130270.15	ENST00000526092	hsa-miR-548aj-3p	1799310	1799316	7mer-m8	1799309	1799330	143.00	-8.54
CAediting_1272135	chr19_1799315_-	ENSG00000130270.15	ENST00000526092	hsa-miR-548am-3p	1799310	1799316	7mer-m8	1799309	1799328	144.00	-11.65
CAediting_1272135	chr19_1799315_-	ENSG00000130270.15	ENST00000526092	hsa-miR-548aq-3p	1799310	1799316	7mer-m8	1799309	1799331	143.00	-10.65
CAediting_1272135	chr19_1799315_-	ENSG00000130270.15	ENST00000526092	hsa-miR-548j-3p	1799310	1799316	7mer-m8	1799309	1799329	141.00	-10.65
CAediting_1272135	chr19_1799315_-	ENSG00000130270.15	ENST00000526092	hsa-miR-548x-3p	1799310	1799316	7mer-m8	1799309	1799329	143.00	-8.54
CAediting_1272135	chr19_1799315_-	ENSG00000130270.15	ENST00000526092	hsa-miR-548x-3p	1799310	1799316	7mer-m8	1799309	1799329	143.00	-8.54
CAediting_1272135	chr19_1799315_-	ENSG00000130270.15	ENST00000526092	hsa-miR-7844-5p	1799312	1799318	7mer-m8	1799311	1799332	156.00	-17.53
CAediting_1272139	chr19_1799352_-	ENSG00000130270.15	ENST00000526092	hsa-miR-3614-5p	1799352	1799358	7mer-m8	1799351	1799374	152.00	-24.53
CAediting_1272139	chr19_1799352_-	ENSG00000130270.15	ENST00000526092	hsa-miR-4691-3p	1799348	1799354	7mer-m8	1799347	1799373	152.00	-29.86
CAediting_1272140	chr19_1799355_-	ENSG00000130270.15	ENST00000526092	hsa-miR-6852-5p	1799354	1799359	6mer	1799353	1799373	148.00	-26.62
CAediting_1272146	chr19_1799521_-	ENSG00000130270.15	ENST00000526092	hsa-miR-3189-3p	1799520	1799526	7mer-m8	1799519	1799542	149.00	-26.69
CAediting_1272146	chr19_1799521_-	ENSG00000130270.15	ENST00000526092	hsa-miR-6813-3p	1799519	1799525	7mer-m8	1799518	1799538	140.00	-12.15
CAediting_1272147	chr19_1799522_-	ENSG00000130270.15	ENST00000526092	hsa-miR-326	1799520	1799526	7mer-m8	1799519	1799538	140.00	-14.60
CAediting_1272147	chr19_1799522_-	ENSG00000130270.15	ENST00000526092	hsa-miR-330-5p	1799520	1799526	7mer-m8	1799519	1799540	140.00	-21.93
CAediting_1272147	chr19_1799522_-	ENSG00000130270.15	ENST00000526092	hsa-miR-4314	1799521	1799527	7mer-m8	1799520	1799537	140.00	-21.61
CAediting_1272147	chr19_1799522_-	ENSG00000130270.15	ENST00000526092	hsa-miR-514a-5p	1799519	1799525	7mer-m8	1799518	1799541	146.00	-18.62
CAediting_1272147	chr19_1799522_-	ENSG00000130270.15	ENST00000526092	hsa-miR-514a-5p	1799519	1799525	7mer-m8	1799518	1799541	146.00	-18.62
CAediting_1272147	chr19_1799522_-	ENSG00000130270.15	ENST00000526092	hsa-miR-514a-5p	1799519	1799525	7mer-m8	1799518	1799541	146.00	-18.62
CAediting_1272148	chr19_1799540_-	ENSG00000130270.15	ENST00000526092	hsa-miR-3937	1799536	1799542	7mer-m8	1799535	1799558	143.00	-26.81
CAediting_1272113	chr19_1798895_-	ENSG00000130270.15	ENST00000526092	hsa-miR-4738-5p	1798890	1798897	8mer-1a	1798890	1798911	147.00	-14.64
CAediting_1272116	chr19_1798975_-	ENSG00000130270.15	ENST00000526092	hsa-miR-378a-5p	1798973	1798979	7mer-m8	1798972	1798993	145.00	-11.17
CAediting_1272130	chr19_1799139_-	ENSG00000130270.15	ENST00000526092	hsa-miR-1224-3p	1799135	1799141	7mer-m8	1799134	1799154	145.00	-20.54
CAediting_1272136	chr19_1799329_-	ENSG00000130270.15	ENST00000526092	hsa-miR-10400-5p	1799327	1799332	6mer	1799326	1799347	141.00	-23.02
CAediting_1272136	chr19_1799329_-	ENSG00000130270.15	ENST00000526092	hsa-miR-3180	1799325	1799331	7mer-m8	1799324	1799342	143.00	-21.82
CAediting_1272136	chr19_1799329_-	ENSG00000130270.15	ENST00000526092	hsa-miR-3180	1799325	1799331	7mer-m8	1799324	1799342	143.00	-21.82
CAediting_1272136	chr19_1799329_-	ENSG00000130270.15	ENST00000526092	hsa-miR-3180-3p	1799325	1799331	7mer-m8	1799324	1799345	143.00	-22.96
CAediting_1272136	chr19_1799329_-	ENSG00000130270.15	ENST00000526092	hsa-miR-3180-3p	1799325	1799331	7mer-m8	1799324	1799345	143.00	-22.96
CAediting_1272136	chr19_1799329_-	ENSG00000130270.15	ENST00000526092	hsa-miR-3180-3p	1799325	1799331	7mer-m8	1799324	1799345	143.00	-22.96
CAediting_1272136	chr19_1799329_-	ENSG00000130270.15	ENST00000526092	hsa-miR-3196	1799325	1799331	7mer-m8	1799324	1799341	152.00	-28.56
CAediting_1272136	chr19_1799329_-	ENSG00000130270.15	ENST00000526092	hsa-miR-6816-5p	1799325	1799331	7mer-m8	1799324	1799342	144.00	-26.11
CAediting_1272145	chr19_1799509_-	ENSG00000130270.15	ENST00000526092	hsa-miR-106a-3p	1799507	1799512	6mer	1799506	1799527	141.00	-21.13

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1272148	chr19_1799540_-	ENSG00000130270.15	ENST00000526092	hsa-miR-12114	1799537	1799543	7mer-m8	1799536	1799555	148	-27.53
CAediting_1272140	chr19_1799355_-	ENSG00000130270.15	ENST00000526092	hsa-miR-12126	1799352	1799359	8mer-1a	1799352	1799375	147	-12.83
CAediting_1272141	chr19_1799356_-	ENSG00000130270.15	ENST00000526092	hsa-miR-12126	1799352	1799359	8mer-1a	1799352	1799375	147	-12.83
CAediting_1272120	chr19_1799034_-	ENSG00000130270.15	ENST00000526092	hsa-miR-12126	1799031	1799038	8mer-1a	1799031	1799054	155	-13.95
CAediting_1272121	chr19_1799035_-	ENSG00000130270.15	ENST00000526092	hsa-miR-12126	1799031	1799038	8mer-1a	1799031	1799054	155	-13.95
CAediting_1272123	chr19_1799048_-	ENSG00000130270.15	ENST00000526092	hsa-miR-1233-5p	1799047	1799053	7mer-m8	1799046	1799071	147	-28.22
CAediting_1272123	chr19_1799048_-	ENSG00000130270.15	ENST00000526092	hsa-miR-1233-5p	1799047	1799053	7mer-m8	1799046	1799071	147	-28.22
CAediting_1272123	chr19_1799048_-	ENSG00000130270.15	ENST00000526092	hsa-miR-1273h-5p	1799048	1799054	7mer-m8	1799047	1799065	141	-18.43
CAediting_1272115	chr19_1798960_-	ENSG00000130270.15	ENST00000526092	hsa-miR-135a-3p	1798959	1798965	7mer-m8	1798958	1798979	150	-18.27
CAediting_1272113	chr19_1798895_-	ENSG00000130270.15	ENST00000526092	hsa-miR-1825	1798890	1798897	8mer-1a	1798890	1798907	140	-14.65
CAediting_1272113	chr19_1798895_-	ENSG00000130270.15	ENST00000526092	hsa-miR-199b-5p	1798890	1798896	7mer-1a	1798890	1798912	144	-13.22
CAediting_1272128	chr19_1799105_-	ENSG00000130270.15	ENST00000526092	hsa-miR-20a-3p	1799104	1799110	7mer-m8	1799103	1799122	145	-14.88
CAediting_1272129	chr19_1799109_-	ENSG00000130270.15	ENST00000526092	hsa-miR-20a-3p	1799104	1799110	7mer-m8	1799103	1799122	145	-14.88
CAediting_1272128	chr19_1799105_-	ENSG00000130270.15	ENST00000526092	hsa-miR-217-5p	1799103	1799109	7mer-m8	1799102	1799124	142	-22.78
CAediting_1272127	chr19_1799097_-	ENSG00000130270.15	ENST00000526092	hsa-miR-25-3p	1799095	1799101	7mer-m8	1799094	1799119	150	-21.16
CAediting_1272143	chr19_1799397_-	ENSG00000130270.15	ENST00000526092	hsa-miR-30a-3p	1799396	1799402	7mer-m8	1799395	1799418	153	-15.79
CAediting_1272141	chr19_1799356_-	ENSG00000130270.15	ENST00000526092	hsa-miR-30b-3p	1799355	1799362	8mer-1a	1799355	1799376	151	-15.94
CAediting_1272123	chr19_1799048_-	ENSG00000130270.15	ENST00000526092	hsa-miR-30b-3p	1799048	1799054	7mer-m8	1799047	1799066	146	-15.96
CAediting_1272143	chr19_1799397_-	ENSG00000130270.15	ENST00000526092	hsa-miR-30d-3p	1799396	1799402	7mer-m8	1799395	1799418	152	-14.98
CAediting_1272143	chr19_1799397_-	ENSG00000130270.15	ENST00000526092	hsa-miR-30e-3p	1799396	1799402	7mer-m8	1799395	1799420	145	-11.62
CAediting_1272148	chr19_1799540_-	ENSG00000130270.15	ENST00000526092	hsa-miR-3165	1799538	1799544	7mer-m8	1799537	1799559	141	-17.45
CAediting_1272144	chr19_1799402_-	ENSG00000130270.15	ENST00000526092	hsa-miR-3174	1799400	1799405	6mer	1799399	1799421	151	-25.16
CAediting_1272127	chr19_1799097_-	ENSG00000130270.15	ENST00000526092	hsa-miR-32-5p	1799095	1799101	7mer-m8	1799094	1799113	148	-13.43
CAediting_1272117	chr19_1798999_-	ENSG00000130270.15	ENST00000526092	hsa-miR-320e	1798994	1799001	8mer-1a	1798994	1799010	152	-19.23
CAediting_1272128	chr19_1799105_-	ENSG00000130270.15	ENST00000526092	hsa-miR-324-3p	1799101	1799107	7mer-m8	1799100	1799127	146	-24.52
CAediting_1272122	chr19_1799043_-	ENSG00000130270.15	ENST00000526092	hsa-miR-3616-5p	1799043	1799049	7mer-m8	1799042	1799063	140	-9.09
CAediting_1272123	chr19_1799048_-	ENSG00000130270.15	ENST00000526092	hsa-miR-3616-5p	1799043	1799049	7mer-m8	1799042	1799063	140	-9.09
CAediting_1272134	chr19_1799241_-	ENSG00000130270.15	ENST00000526092	hsa-miR-3622a-3p	1799236	1799243	8mer-1a	1799236	1799257	144	-13.8
CAediting_1272134	chr19_1799241_-	ENSG00000130270.15	ENST00000526092	hsa-miR-3622b-3p	1799236	1799243	8mer-1a	1799236	1799256	149	-17.67
CAediting_1272127	chr19_1799097_-	ENSG00000130270.15	ENST00000526092	hsa-miR-363-3p	1799095	1799101	7mer-m8	1799094	1799120	149	-19.28
CAediting_1272148	chr19_1799540_-	ENSG00000130270.15	ENST00000526092	hsa-miR-3665	1799535	1799541	7mer-m8	1799534	1799551	144	-22.13
CAediting_1272127	chr19_1799097_-	ENSG00000130270.15	ENST00000526092	hsa-miR-367-3p	1799095	1799101	7mer-m8	1799094	1799115	153	-12.08
CAediting_1272112	chr19_1798886_-	ENSG00000130270.15	ENST00000526092	hsa-miR-3686	1798882	1798888	7mer-m8	1798881	1798902	140	-11.45
CAediting_1272141	chr19_1799356_-	ENSG00000130270.15	ENST00000526092	hsa-miR-3689a-3p	1799355	1799362	8mer-1a	1799355	1799375	147	-21.52
CAediting_1272123	chr19_1799048_-	ENSG00000130270.15	ENST00000526092	hsa-miR-3689a-3p	1799048	1799054	7mer-m8	1799047	1799068	146	-16.26
CAediting_1272141	chr19_1799356_-	ENSG00000130270.15	ENST00000526092	hsa-miR-3689b-3p	1799355	1799362	8mer-1a	1799355	1799375	147	-20.79
CAediting_1272123	chr19_1799048_-	ENSG00000130270.15	ENST00000526092	hsa-miR-3689b-3p	1799048	1799054	7mer-m8	1799047	1799068	146	-17.57
CAediting_1272141	chr19_1799356_-	ENSG00000130270.15	ENST00000526092	hsa-miR-3689c	1799355	1799362	8mer-1a	1799355	1799375	147	-20.79
CAediting_1272123	chr19_1799048_-	ENSG00000130270.15	ENST00000526092	hsa-miR-3689c	1799048	1799054	7mer-m8	1799047	1799068	146	-17.57
CAediting_1272131	chr19_1799141_-	ENSG00000130270.15	ENST00000526092	hsa-miR-371b-5p	1799139	1799146	8mer-1a	1799139	1799160	153	-11.76
CAediting_1272131	chr19_1799141_-	ENSG00000130270.15	ENST00000526092	hsa-miR-373-5p	1799139	1799146	8mer-1a	1799139	1799160	140	-8.35
CAediting_1272144	chr19_1799402_-	ENSG00000130270.15	ENST00000526092	hsa-miR-4276	1799397	1799404	8mer-1a	1799397	1799413	140	-9.16
CAediting_1272142	chr19_1799364_-	ENSG00000130270.15	ENST00000526092	hsa-miR-4478	1799360	1799366	7mer-m8	1799359	1799375	151	-27.88
CAediting_1272120	chr19_1799034_-	ENSG00000130270.15	ENST00000526092	hsa-miR-450a-1-3p	1799034	1799040	7mer-m8	1799033	1799054	140	-9.54
CAediting_1272121	chr19_1799035_-	ENSG00000130270.15	ENST00000526092	hsa-miR-450a-1-3p	1799034	1799040	7mer-m8	1799033	1799054	140	-9.54
CAediting_1272118	chr19_1799021_-	ENSG00000130270.15	ENST00000526092	hsa-miR-4540	1799021	1799026	6mer	1799020	1799041	140	-15.78
CAediting_1272142	chr19_1799364_-	ENSG00000130270.15	ENST00000526092	hsa-miR-4649-3p	1799363	1799369	7mer-m8	1799362	1799382	140	-14.18
CAediting_1272136	chr19_1799329_-	ENSG00000130270.15	ENST00000526092	hsa-miR-4651	1799325	1799331	7mer-m8	1799324	1799343	140	-21.75
CAediting_1272114	chr19_1798925_-	ENSG00000130270.15	ENST00000526092	hsa-miR-4720-3p	1798923	1798929	7mer-m8	1798922	1798942	142	-14.04
CAediting_1272123	chr19_1799048_-	ENSG00000130270.15	ENST00000526092	hsa-miR-4795-5p	1799043	1799050	8mer-1a	1799043	1799063	140	-11.92
CAediting_1272130	chr19_1799139_-	ENSG00000130270.15	ENST00000526092	hsa-miR-514b-5p	1799139	1799144	6mer	1799138	1799159	142	-11.57
CAediting_1272131	chr19_1799141_-	ENSG00000130270.15	ENST00000526092	hsa-miR-514b-5p	1799139	1799144	6mer	1799138	1799159	142	-11.57
CAediting_1272113	chr19_1798895_-	ENSG00000130270.15	ENST00000526092	hsa-miR-520f-3p	1798893	1798899	7mer-m8	1798892	1798913	140	-13.82
CAediting_1272117	chr19_1798999_-	ENSG00000130270.15	ENST00000526092	hsa-miR-5589-5p	1798997	1799003	7mer-m8	1798996	1799016	146	-18.93
CAediting_1272139	chr19_1799352_-	ENSG00000130270.15	ENST00000526092	hsa-miR-5690	1799348	1799354	7mer-m8	1799347	1799367	145	-16.74
CAediting_1272122	chr19_1799043_-	ENSG00000130270.15	ENST00000526092	hsa-miR-573	1799043	1799049	7mer-m8	1799042	1799067	141	-14.58
CAediting_1272123	chr19_1799048_-	ENSG00000130270.15	ENST00000526092	hsa-miR-573	1799043	1799049	7mer-m8	1799042	1799067	141	-14.58
CAediting_1272136	chr19_1799329_-	ENSG00000130270.15	ENST00000526092	hsa-miR-608	1799325	1799331	7mer-m8	1799324	1799347	149	-20.82
CAediting_1272131	chr19_1799141_-	ENSG00000130270.15	ENST00000526092	hsa-miR-616-5p	1799139	1799146	8mer-1a	1799139	1799160	140	-5.92
CAediting_1272142	chr19_1799364_-	ENSG00000130270.15	ENST00000526092	hsa-miR-6765-5p	1799364	1799370	7mer-m8	1799363	1799395	154	-38.38
CAediting_1272123	chr19_1799048_-	ENSG00000130270.15	ENST00000526092	hsa-miR-6778-5p	1799047	1799053	7mer-m8	1799046	1799067	150	-24.98
CAediting_1272141	chr19_1799356_-	ENSG00000130270.15	ENST00000526092	hsa-miR-6779-5p	1799355	1799362	8mer-1a	1799355	1799373	148	-23.05
CAediting_1272123	chr19_1799048_-	ENSG00000130270.15	ENST00000526092	hsa-miR-6779-5p	1799048	1799054	7mer-m8	1799047	1799070	149	-24.64
CAediting_1272141	chr19_1799356_-	ENSG00000130270.15	ENST00000526092	hsa-miR-6780a-5p	1799355	1799362	8mer-1a	1799355	1799375	145	-24.16
CAediting_1272123	chr19_1799048_-	ENSG00000130270.15	ENST00000526092	hsa-miR-6780a-5p	1799048	1799054	7mer-m8	1799047	1799069	141	-20.59
CAediting_1272142	chr19_1799364_-	ENSG00000130270.15	ENST00000526092	hsa-miR-6884-5p	1799359	1799365	7mer-m8	1799358	1799378	155	-21.75
CAediting_1272142	chr19_1799364_-	ENSG00000130270.15	ENST00000526092	hsa-miR-7160-5p	1799362	1799368	7mer-m8	1799361	1799379	147	-20.43
CAediting_1272142	chr19_1799364_-	ENSG00000130270.15	ENST00000526092	hsa-miR-7162-3p	1799363	1799368	6mer	1799362	1799381	140	-20.26
CAediting_1272149	chr19_1799586_-	ENSG00000130270.15	ENST00000526092	hsa-miR-7855-5p	1799583	1799588	6mer	1799582	1799601	148	-26.03
CAediting_1272148	chr19_1799540_-	ENSG00000130270.15	ENST00000526092	hsa-miR-8056	1799539	1799544	6mer	1799538	1799556	148	-22.8
CAediting_1272147	chr19_1799522_-	ENSG00000130270.15	ENST00000526092	hsa-miR-887-5p	1799521	1799528	8mer-1a	1799521	1799542	148	-16.01
CAediting_1272140	chr19_1799355_-	ENSG00000130270.15	ENST00000526092	hsa-miR-887-5p	1799355	1799361	7mer-m8	1799354	1799373	143	-18.12
CAediting_1272141	chr19_1799356_-	ENSG00000130270.15	ENST00000526092	hsa-miR-887-5p	1799355	1799361	7mer-m8	1799354	1799373	143	-18.12
CAediting_1272136	chr19_1799329_-	ENSG00000130270.15	ENST00000526092	hsa-miR-891a-3p	1799328	1799334	7mer-m8	1799327	1799348	155	-17.1

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_748296	chr10_51299626_+	ENSG00000130270.15	ENST00000310127	hsa-miR-605-3p	1782878	1782884	7mer-m8	1782877	1782897	149	-13.53
CAediting_748296	chr10_51299626_+	ENSG00000130270.15	ENST00000310127	hsa-miR-605-3p	1782321	1782327	7mer-m8	1782320	1782339	147	-17.2
CAediting_393	chr1_1167164_+	ENSG00000130270.15	ENST00000310127	hsa-miR-200b-3p	1782591	1782597	7mer-m8	1782590	1782611	147	-12.37
CAediting_748296	chr10_51299626_+	ENSG00000130270.15	ENST00000531925	hsa-miR-605-3p	1782878	1782884	7mer-m8	1782877	1782897	149	-13.53
CAediting_748296	chr10_51299626_+	ENSG00000130270.15	ENST00000531925	hsa-miR-605-3p	1782321	1782327	7mer-m8	1782320	1782339	147	-17.2
CAediting_846604	chr11_93733708_-	ENSG00000130270.15	ENST00000531925	hsa-miR-1304-3p	1783241	1783247	7mer-m8	1783240	1783261	150	-24.72
CAediting_393	chr1_1167164_+	ENSG00000130270.15	ENST00000531925	hsa-miR-200b-3p	1782591	1782597	7mer-m8	1782590	1782611	147	-12.37
CAediting_980496	chr14_31014685_-	ENSG00000130270.15	ENST00000526092	hsa-miR-624-3p	1799272	1799278	7mer-m8	1799271	1799291	140	-14.24
CAediting_1054808	chr15_66496985_-	ENSG00000130270.15	ENST00000531925	hsa-miR-4512	1806253	1806258	6mer	1806252	1806276	145	-30.03
CAediting_1160181	chr17_7017644_-	ENSG00000130270.15	ENST00000531925	hsa-miR-195-3p	1805891	1805897	7mer-1a	1805891	1805911	141	-18.64
CAediting_414656	chr5_72878640_+	ENSG00000130270.15	ENST00000531925	hsa-miR-4804-3p	1789919	1789925	7mer-m8	1789918	1789937	151	-17.26
CAediting_1229413	chr17_67471544_+	ENSG00000130270.15	ENST00000531925	hsa-miR-548aa	1785232	1785238	7mer-m8	1785231	1785255	140	-9.63
CAediting_396018	chr5_1062918_-	ENSG00000130270.15	ENST00000531925	hsa-miR-4635	1784834	1784840	7mer-m8	1784833	1784853	144	-12.92
CAediting_1306323	chr19_13836462_-	ENSG00000130270.15	ENST00000531925	hsa-miR-27a-3p	1783158	1783164	7mer-m8	1783157	1783177	150	-21.38
CAediting_1229414	chr17_67471546_+	ENSG00000130270.15	ENST00000526092	hsa-miR-548aa	1798941	1798947	7mer-m8	1798940	1798964	140	-12.81
CAediting_524911	chr7_5495852_-	ENSG00000130270.15	ENST00000526092	hsa-miR-589-3p	1799124	1799130	7mer-m8	1799123	1799147	158	-20.33
CAediting_468389	chr6_31355314_-	ENSG00000130270.15	ENST00000531925	hsa-miR-6891-5p	1807204	1807210	7mer-m8	1807203	1807221	151	-22.38
CAediting_1524209	chrX_134546392_-	ENSG00000130270.15	ENST00000531925	hsa-miR-503-5p	1807241	1807247	7mer-m8	1807240	1807262	152	-19.51
CAediting_468389	chr6_31355314_-	ENSG00000130270.15	ENST00000531925	hsa-miR-6891-5p	1802545	1802551	7mer-m8	1802541	1802559	158	-22.58
CAediting_468389	chr6_31355314_-	ENSG00000130270.15	ENST00000531925	hsa-miR-6891-5p	1802542	1802548	7mer-m8	1802541	1802559	158	-22.58
CAediting_468389	chr6_31355314_-	ENSG00000130270.15	ENST00000531925	hsa-miR-6891-5p	1785243	1785250	8mer-1a	1785243	1785261	145	-21.87

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_580943	chr7_100356700_+	ENSG00000130270.15	ENST00000310127	hsa-miR-6840-3p	1783002	1783008	7mer-m8	1783001	1783022	140	-18.58
CAediting_580943	chr7_100356700_+	ENSG00000130270.15	ENST00000310127	hsa-miR-6840-3p	1782199	1782206	8mer-1a	1782199	1782220	140	-19.17
CAediting_1054808	chr15_66496985_-	ENSG00000130270.15	ENST00000531925	hsa-miR-4512	1806443	1806449	7mer-m8	1806442	1806463	148	-24.57
CAediting_580943	chr7_100356700_+	ENSG00000130270.15	ENST00000531925	hsa-miR-6840-3p	1782199	1782206	8mer-1a	1782199	1782220	140	-19.17
CAediting_580943	chr7_100356700_+	ENSG00000130270.15	ENST00000531925	hsa-miR-6840-3p	1783002	1783008	7mer-m8	1783001	1783022	140	-18.58

Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for ATP8B3

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

Top

Relation with ADAR for ATP8B3

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

Top

Relation with cancer stages for ATP8B3

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

Top

Relation with survival for ATP8B3

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

Top

RelatedDrugs for ATP8B3

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

Top

RelatedDiseases for ATP8B3

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene