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Editing gene: C19orf25 (CAeditome ID:148223)

Gene summary for C19orf25

Gene summary

Gene information	Gene symbol	C19orf25
	Gene ID	148223
	Gene name	chromosome 19 open reading frame 25
	Synonyms	-
	Cytomap	19p13.3
	Type of gene	protein-coding
	Description	UPF0449 protein C19orf25
	Modification date	20210518
	UniProtAcc	Q9UFG5
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for C19orf25

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000119559.14

RNA A-to-I editing events in Cancer.

CAediting_1271083(1475423, -), CAediting_1271084(1475425, -), CAediting_1271085(1475436, -), CAediting_1271086(1475463, -), CAediting_1271087(1475464, -), CAediting_1271088(1475476, -), CAediting_1271089(1475477, -), CAediting_1271090(1475514, -), CAediting_1271091(1475516, -), CAediting_1271092(1475526, -), CAediting_1271093(1475565, -), CAediting_1271094(1475567, -), CAediting_1271095(1475577, -), CAediting_1271096(1475606, -), CAediting_1271097(1475653, -), CAediting_1271098(1475683, -), CAediting_1271099(1475687, -), CAediting_1271100(1476709, -), CAediting_1271101(1476728, -), CAediting_1271102(1476738, -), CAediting_1271103(1476741, -), CAediting_1271104(1476745, -), CAediting_1271105(1476781, -), CAediting_1271106(1476785, -), CAediting_1271107(1476793, -), CAediting_1271108(1476794, -), CAediting_1271109(1476815, -), CAediting_1271110(1476829, -), CAediting_1271111(1476835, -), CAediting_1271112(1476888, -), CAediting_1271113(1476889, -), CAediting_1271114(1476905, -), CAediting_1271115(1476993, -), CAediting_1271116(1477092, -), CAediting_1271117(1477137, -), CAediting_1271118(1477138, -), CAediting_1271119(1477171, -), CAediting_1271120(1477172, -), CAediting_1271121(1477175, -), CAediting_1271122(1477203, -), CAediting_1271123(1477205, -), CAediting_1271124(1477206, -), CAediting_1271125(1477221, -), CAediting_1271126(1477274, -), CAediting_1271127(1477281, -), CAediting_1271128(1477902, -), CAediting_1271129(1477907, -), CAediting_1271130(1477977, -), CAediting_1271131(1477978, -), CAediting_1271132(1477988, -), CAediting_1271133(1478004, -), CAediting_1271134(1478013, -), CAediting_1271135(1478018, -), CAediting_1271136(1478043, -), CAediting_1271137(1478218, -), CAediting_1271138(1478283, -), CAediting_1271139(1478369, -), CAediting_1271140(1478378, -), CAediting_1271141(1478379, -), CAediting_1271142(1478389, -), CAediting_1271143(1478395, -), CAediting_1271144(1478477, -), CAediting_1271145(1478492, -), CAediting_1271146(1478498, -), CAediting_1271147(1478501, -), CAediting_1271148(1478506, -), CAediting_1271149(1478541, -), CAediting_1271150(1478555, -),

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RNA editing positional annotations for C19orf25 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1271083	chr19_1475423_-	exonic
CAediting_1271084	chr19_1475425_-	exonic
CAediting_1271085	chr19_1475436_-	exonic
CAediting_1271086	chr19_1475463_-	exonic
CAediting_1271087	chr19_1475464_-	exonic
CAediting_1271088	chr19_1475476_-	exonic
CAediting_1271089	chr19_1475477_-	exonic
CAediting_1271090	chr19_1475514_-	exonic
CAediting_1271091	chr19_1475516_-	ncRNA_exonic;splicing
CAediting_1271092	chr19_1475526_-	ncRNA_exonic
CAediting_1271093	chr19_1475565_-	ncRNA_exonic
CAediting_1271094	chr19_1475567_-	ncRNA_exonic
CAediting_1271095	chr19_1475577_-	ncRNA_exonic
CAediting_1271096	chr19_1475606_-	ncRNA_exonic
CAediting_1271097	chr19_1475653_-	ncRNA_exonic
CAediting_1271098	chr19_1475683_-	ncRNA_exonic
CAediting_1271099	chr19_1475687_-	ncRNA_exonic
CAediting_1271100	chr19_1476709_-	intronic
CAediting_1271101	chr19_1476728_-	intronic
CAediting_1271102	chr19_1476738_-	intronic
CAediting_1271103	chr19_1476741_-	intronic
CAediting_1271104	chr19_1476745_-	intronic
CAediting_1271105	chr19_1476781_-	intronic
CAediting_1271106	chr19_1476785_-	intronic
CAediting_1271107	chr19_1476793_-	intronic
CAediting_1271108	chr19_1476794_-	intronic
CAediting_1271109	chr19_1476815_-	intronic
CAediting_1271110	chr19_1476829_-	intronic
CAediting_1271111	chr19_1476835_-	intronic
CAediting_1271112	chr19_1476888_-	intronic
CAediting_1271113	chr19_1476889_-	intronic
CAediting_1271114	chr19_1476905_-	intronic
CAediting_1271115	chr19_1476993_-	intronic
CAediting_1271116	chr19_1477092_-	intronic
CAediting_1271117	chr19_1477137_-	intronic
CAediting_1271118	chr19_1477138_-	intronic
CAediting_1271119	chr19_1477171_-	intronic
CAediting_1271120	chr19_1477172_-	intronic
CAediting_1271121	chr19_1477175_-	intronic
CAediting_1271122	chr19_1477203_-	intronic
CAediting_1271123	chr19_1477205_-	intronic
CAediting_1271124	chr19_1477206_-	intronic
CAediting_1271125	chr19_1477221_-	intronic
CAediting_1271126	chr19_1477274_-	intronic
CAediting_1271127	chr19_1477281_-	intronic
CAediting_1271128	chr19_1477902_-	intronic
CAediting_1271129	chr19_1477907_-	intronic
CAediting_1271130	chr19_1477977_-	intronic
CAediting_1271131	chr19_1477978_-	intronic
CAediting_1271132	chr19_1477988_-	intronic
CAediting_1271133	chr19_1478004_-	intronic
CAediting_1271134	chr19_1478013_-	intronic
CAediting_1271135	chr19_1478018_-	intronic
CAediting_1271136	chr19_1478043_-	intronic
CAediting_1271137	chr19_1478218_-	intronic
CAediting_1271138	chr19_1478283_-	intronic
CAediting_1271139	chr19_1478369_-	intronic
CAediting_1271140	chr19_1478378_-	intronic
CAediting_1271141	chr19_1478379_-	intronic
CAediting_1271142	chr19_1478389_-	intronic
CAediting_1271143	chr19_1478395_-	intronic
CAediting_1271144	chr19_1478477_-	ncRNA_exonic
CAediting_1271145	chr19_1478492_-	ncRNA_exonic
CAediting_1271146	chr19_1478498_-	ncRNA_exonic
CAediting_1271147	chr19_1478501_-	ncRNA_exonic
CAediting_1271148	chr19_1478506_-	ncRNA_exonic
CAediting_1271149	chr19_1478541_-	ncRNA_exonic
CAediting_1271150	chr19_1478555_-	ncRNA_exonic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1271083	chr19_1475423_-	SINE	Alu	AluJb
CAediting_1271084	chr19_1475425_-	SINE	Alu	AluJb
CAediting_1271085	chr19_1475436_-	SINE	Alu	AluJb
CAediting_1271086	chr19_1475463_-	SINE	Alu	AluJb
CAediting_1271087	chr19_1475464_-	SINE	Alu	AluJb
CAediting_1271088	chr19_1475476_-	SINE	Alu	AluJb
CAediting_1271089	chr19_1475477_-	SINE	Alu	AluJb
CAediting_1271090	chr19_1475514_-	SINE	Alu	AluJb
CAediting_1271091	chr19_1475516_-	SINE	Alu	AluJb
CAediting_1271092	chr19_1475526_-	SINE	Alu	AluJb
CAediting_1271093	chr19_1475565_-	SINE	Alu	AluJb
CAediting_1271094	chr19_1475567_-	SINE	Alu	AluJb
CAediting_1271095	chr19_1475577_-	SINE	Alu	AluJb
CAediting_1271096	chr19_1475606_-	SINE	Alu	AluJb
CAediting_1271097	chr19_1475653_-	SINE	Alu	AluJb
CAediting_1271098	chr19_1475683_-	SINE	Alu	AluJb
CAediting_1271099	chr19_1475687_-	SINE	Alu	AluJb
CAediting_1271100	chr19_1476709_-	SINE	Alu	AluJr4
CAediting_1271101	chr19_1476728_-	SINE	Alu	AluJr4
CAediting_1271102	chr19_1476738_-	SINE	Alu	AluJr4
CAediting_1271103	chr19_1476741_-	SINE	Alu	AluJr4
CAediting_1271104	chr19_1476745_-	SINE	Alu	AluJr4
CAediting_1271105	chr19_1476781_-	SINE	Alu	AluJr4
CAediting_1271106	chr19_1476785_-	SINE	Alu	AluJr4
CAediting_1271107	chr19_1476793_-	SINE	Alu	AluJr4
CAediting_1271108	chr19_1476794_-	SINE	Alu	AluJr4
CAediting_1271109	chr19_1476815_-	SINE	Alu	AluJr4
CAediting_1271110	chr19_1476829_-	SINE	Alu	AluJr4
CAediting_1271111	chr19_1476835_-	SINE	Alu	AluJr4
CAediting_1271112	chr19_1476888_-	SINE	Alu	AluJr4
CAediting_1271113	chr19_1476889_-	SINE	Alu	AluJr4
CAediting_1271114	chr19_1476905_-	SINE	Alu	AluJr4
CAediting_1271115	chr19_1476993_-	SINE	Alu	AluSz
CAediting_1271116	chr19_1477092_-	SINE	Alu	AluSz
CAediting_1271117	chr19_1477137_-	SINE	Alu	AluSz
CAediting_1271118	chr19_1477138_-	SINE	Alu	AluSz
CAediting_1271119	chr19_1477171_-	SINE	Alu	AluSz
CAediting_1271120	chr19_1477172_-	SINE	Alu	AluSz
CAediting_1271121	chr19_1477175_-	SINE	Alu	AluSz
CAediting_1271122	chr19_1477203_-	SINE	Alu	AluSz
CAediting_1271123	chr19_1477205_-	SINE	Alu	AluSz
CAediting_1271124	chr19_1477206_-	SINE	Alu	AluSz
CAediting_1271125	chr19_1477221_-	SINE	Alu	AluSz
CAediting_1271126	chr19_1477274_-	SINE	Alu	AluSz
CAediting_1271127	chr19_1477281_-	SINE	Alu	AluSz
CAediting_1271128	chr19_1477902_-	SINE	Alu	AluSz
CAediting_1271129	chr19_1477907_-	SINE	Alu	AluSz
CAediting_1271130	chr19_1477977_-	SINE	Alu	AluSz
CAediting_1271131	chr19_1477978_-	SINE	Alu	AluSz
CAediting_1271132	chr19_1477988_-	SINE	Alu	AluSz
CAediting_1271133	chr19_1478004_-	SINE	Alu	AluSz
CAediting_1271134	chr19_1478013_-	SINE	Alu	AluSz
CAediting_1271135	chr19_1478018_-	SINE	Alu	AluSz
CAediting_1271136	chr19_1478043_-	SINE	Alu	AluSz
CAediting_1271137	chr19_1478218_-	SINE	Alu	AluJr
CAediting_1271138	chr19_1478283_-	SINE	Alu	AluSx1
CAediting_1271139	chr19_1478369_-	SINE	Alu	AluSx1
CAediting_1271140	chr19_1478378_-	SINE	Alu	AluSx1
CAediting_1271141	chr19_1478379_-	SINE	Alu	AluSx1
CAediting_1271142	chr19_1478389_-	SINE	Alu	AluSx1
CAediting_1271143	chr19_1478395_-	SINE	Alu	AluSx1
CAediting_1271144	chr19_1478477_-	SINE	Alu	AluSx1
CAediting_1271145	chr19_1478492_-	SINE	Alu	AluSx1
CAediting_1271146	chr19_1478498_-	SINE	Alu	AluSx1
CAediting_1271147	chr19_1478501_-	SINE	Alu	AluSx1
CAediting_1271148	chr19_1478506_-	SINE	Alu	AluSx1
CAediting_1271149	chr19_1478541_-	SINE	Alu	AluSx1
CAediting_1271150	chr19_1478555_-	SINE	Alu	AluSx1

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RNA A-to-I editing events in the alternative splicing sites for C19orf25

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000119559.14.C19orf25.

Correlation between RNA A-to-I editing and PSI for ENSG00000119559.14.C19orf25.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for C19orf25

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

GBM.CAediting_1271090.ENSG00000119559.C19orf25.png
Soverview

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Protein coding region RNA A-to-I editings for C19orf25

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for C19orf25

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_748296	chr10_51299626_+	ENSG00000119559.14	ENST00000436106	hsa-miR-605-3p	1473456	1473462	7mer-m8	1473455	1473476	140	-14.66
CAediting_846604	chr11_93733708_-	ENSG00000119559.14	ENST00000436106	hsa-miR-1304-3p	1474613	1474619	7mer-m8	1474612	1474630	144	-13.55
CAediting_980496	chr14_31014685_-	ENSG00000119559.14	ENST00000436106	hsa-miR-624-3p	1473378	1473384	7mer-m8	1473377	1473399	149	-23.85
CAediting_748296	chr10_51299626_+	ENSG00000119559.14	ENST00000588871	hsa-miR-605-3p	1473456	1473462	7mer-m8	1473455	1473476	140	-14.66
CAediting_846604	chr11_93733708_-	ENSG00000119559.14	ENST00000588871	hsa-miR-1304-3p	1474613	1474619	7mer-m8	1474612	1474630	144	-13.55
CAediting_980496	chr14_31014685_-	ENSG00000119559.14	ENST00000588871	hsa-miR-624-3p	1473378	1473384	7mer-m8	1473377	1473399	149	-23.85
CAediting_846604	chr11_93733708_-	ENSG00000119559.14	ENST00000427685	hsa-miR-1304-3p	1474613	1474619	7mer-m8	1474612	1474630	144	-13.55
CAediting_846604	chr11_93733708_-	ENSG00000119559.14	ENST00000586564	hsa-miR-1304-3p	1474613	1474619	7mer-m8	1474612	1474630	144	-13.55
CAediting_846604	chr11_93733708_-	ENSG00000119559.14	ENST00000592872	hsa-miR-1304-3p	1474613	1474619	7mer-m8	1474612	1474630	144	-13.55
CAediting_846604	chr11_93733708_-	ENSG00000119559.14	ENST00000588849	hsa-miR-1304-3p	1475112	1475118	7mer-m8	1475111	1475134	163	-27.89
CAediting_846604	chr11_93733708_-	ENSG00000119559.14	ENST00000588849	hsa-miR-1304-3p	1474613	1474619	7mer-m8	1474612	1474630	144	-13.55
CAediting_393	chr1_1167164_+	ENSG00000119559.14	ENST00000588849	hsa-miR-200b-3p	1475062	1475069	8mer-1a	1475062	1475083	162	-22.03
CAediting_846604	chr11_93733708_-	ENSG00000119559.14	ENST00000590621	hsa-miR-1304-3p	1475112	1475118	7mer-m8	1475111	1475134	163	-27.89
CAediting_846604	chr11_93733708_-	ENSG00000119559.14	ENST00000590621	hsa-miR-1304-3p	1474613	1474619	7mer-m8	1474612	1474630	144	-13.55
CAediting_393	chr1_1167164_+	ENSG00000119559.14	ENST00000590621	hsa-miR-200b-3p	1475062	1475069	8mer-1a	1475062	1475083	162	-22.03
CAediting_688081	chr9_63819627_+	ENSG00000119559.14	ENST00000591027	hsa-miR-4477b	1476029	1476035	7mer-m8	1476028	1476051	143	-11.91
CAediting_77128	chr1_85133844_+	ENSG00000119559.14	ENST00000588427	hsa-miR-4423-3p	1461155	1461161	7mer-m8	1461154	1461174	145	-16.45
CAediting_396018	chr5_1062918_-	ENSG00000119559.14	ENST00000588427	hsa-miR-4635	1461356	1461362	7mer-m8	1461355	1461375	162	-22.6
CAediting_524911	chr7_5495852_-	ENSG00000119559.14	ENST00000588427	hsa-miR-589-3p	1461534	1461540	7mer-m8	1461533	1461557	154	-18.18
CAediting_1054808	chr15_66496985_-	ENSG00000119559.14	ENST00000436106	hsa-miR-4512	1474719	1474724	6mer	1474718	1474739	159	-29.72
CAediting_1229415	chr17_67471547_+	ENSG00000119559.14	ENST00000436106	hsa-miR-548aa	1473681	1473687	7mer-m8	1473680	1473704	145	-14.67
CAediting_1368054	chr19_46709310_-	ENSG00000119559.14	ENST00000436106	hsa-miR-320e	1473660	1473666	7mer-m8	1473659	1473676	148	-18.49
CAediting_77128	chr1_85133844_+	ENSG00000119559.14	ENST00000436106	hsa-miR-4423-3p	1473388	1473394	7mer-m8	1473387	1473407	145	-18.37
CAediting_77128	chr1_85133844_+	ENSG00000119559.14	ENST00000436106	hsa-miR-4423-3p	1474607	1474613	7mer-m8	1474606	1474626	140	-12.47
CAediting_580943	chr7_100356700_+	ENSG00000119559.14	ENST00000436106	hsa-miR-6840-3p	1474686	1474692	7mer-m8	1474685	1474706	140	-26
CAediting_580943	chr7_100356700_+	ENSG00000119559.14	ENST00000436106	hsa-miR-6840-3p	1474130	1474136	7mer-m8	1474129	1474150	145	-24.04
CAediting_524911	chr7_5495852_-	ENSG00000119559.14	ENST00000436106	hsa-miR-589-3p	1474731	1474737	7mer-m8	1474730	1474752	143	-18.55
CAediting_1054808	chr15_66496985_-	ENSG00000119559.14	ENST00000588871	hsa-miR-4512	1474719	1474724	6mer	1474718	1474739	159	-29.72
CAediting_1229415	chr17_67471547_+	ENSG00000119559.14	ENST00000588871	hsa-miR-548aa	1473681	1473687	7mer-m8	1473680	1473704	145	-14.67
CAediting_1368054	chr19_46709310_-	ENSG00000119559.14	ENST00000588871	hsa-miR-320e	1473660	1473666	7mer-m8	1473659	1473676	148	-18.49
CAediting_77128	chr1_85133844_+	ENSG00000119559.14	ENST00000588871	hsa-miR-4423-3p	1473388	1473394	7mer-m8	1473387	1473407	145	-18.37
CAediting_77128	chr1_85133844_+	ENSG00000119559.14	ENST00000588871	hsa-miR-4423-3p	1474607	1474613	7mer-m8	1474606	1474626	140	-12.47
CAediting_580943	chr7_100356700_+	ENSG00000119559.14	ENST00000588871	hsa-miR-6840-3p	1474686	1474692	7mer-m8	1474685	1474706	140	-26
CAediting_580943	chr7_100356700_+	ENSG00000119559.14	ENST00000588871	hsa-miR-6840-3p	1474130	1474136	7mer-m8	1474129	1474150	145	-24.04
CAediting_524911	chr7_5495852_-	ENSG00000119559.14	ENST00000588871	hsa-miR-589-3p	1474731	1474737	7mer-m8	1474730	1474752	143	-18.55
CAediting_1054808	chr15_66496985_-	ENSG00000119559.14	ENST00000427685	hsa-miR-4512	1474719	1474724	6mer	1474718	1474739	159	-29.72
CAediting_77128	chr1_85133844_+	ENSG00000119559.14	ENST00000427685	hsa-miR-4423-3p	1474607	1474613	7mer-m8	1474606	1474626	140	-12.47
CAediting_580943	chr7_100356700_+	ENSG00000119559.14	ENST00000427685	hsa-miR-6840-3p	1474686	1474692	7mer-m8	1474685	1474706	140	-26
CAediting_524911	chr7_5495852_-	ENSG00000119559.14	ENST00000427685	hsa-miR-589-3p	1474731	1474737	7mer-m8	1474730	1474752	143	-18.55
CAediting_1054808	chr15_66496985_-	ENSG00000119559.14	ENST00000586564	hsa-miR-4512	1474719	1474724	6mer	1474718	1474739	159	-29.72
CAediting_77128	chr1_85133844_+	ENSG00000119559.14	ENST00000586564	hsa-miR-4423-3p	1474607	1474613	7mer-m8	1474606	1474626	140	-12.47
CAediting_580943	chr7_100356700_+	ENSG00000119559.14	ENST00000586564	hsa-miR-6840-3p	1474686	1474692	7mer-m8	1474685	1474706	140	-26
CAediting_524911	chr7_5495852_-	ENSG00000119559.14	ENST00000586564	hsa-miR-589-3p	1474731	1474737	7mer-m8	1474730	1474752	143	-18.55
CAediting_1054808	chr15_66496985_-	ENSG00000119559.14	ENST00000592872	hsa-miR-4512	1474719	1474724	6mer	1474718	1474739	159	-29.72
CAediting_77128	chr1_85133844_+	ENSG00000119559.14	ENST00000592872	hsa-miR-4423-3p	1474607	1474613	7mer-m8	1474606	1474626	140	-12.47
CAediting_580943	chr7_100356700_+	ENSG00000119559.14	ENST00000592872	hsa-miR-6840-3p	1474686	1474692	7mer-m8	1474685	1474706	140	-26
CAediting_524911	chr7_5495852_-	ENSG00000119559.14	ENST00000592872	hsa-miR-589-3p	1474731	1474737	7mer-m8	1474730	1474752	143	-18.55
CAediting_1054808	chr15_66496985_-	ENSG00000119559.14	ENST00000588849	hsa-miR-4512	1475216	1475222	7mer-m8	1475215	1475234	154	-32.78
CAediting_1054808	chr15_66496985_-	ENSG00000119559.14	ENST00000588849	hsa-miR-4512	1474719	1474724	6mer	1474718	1474739	159	-29.72
CAediting_77128	chr1_85133844_+	ENSG00000119559.14	ENST00000588849	hsa-miR-4423-3p	1475308	1475314	7mer-m8	1475307	1475327	145	-18.16
CAediting_77128	chr1_85133844_+	ENSG00000119559.14	ENST00000588849	hsa-miR-4423-3p	1474607	1474613	7mer-m8	1474606	1474626	140	-12.47
CAediting_580943	chr7_100356700_+	ENSG00000119559.14	ENST00000588849	hsa-miR-6840-3p	1474686	1474692	7mer-m8	1474685	1474706	140	-26
CAediting_524911	chr7_5495852_-	ENSG00000119559.14	ENST00000588849	hsa-miR-589-3p	1474731	1474737	7mer-m8	1474730	1474752	143	-18.55
CAediting_1054808	chr15_66496985_-	ENSG00000119559.14	ENST00000590621	hsa-miR-4512	1474719	1474724	6mer	1474718	1474739	159	-29.72
CAediting_77128	chr1_85133844_+	ENSG00000119559.14	ENST00000590621	hsa-miR-4423-3p	1474607	1474613	7mer-m8	1474606	1474626	140	-12.47
CAediting_580943	chr7_100356700_+	ENSG00000119559.14	ENST00000590621	hsa-miR-6840-3p	1474686	1474692	7mer-m8	1474685	1474706	140	-26
CAediting_524911	chr7_5495852_-	ENSG00000119559.14	ENST00000590621	hsa-miR-589-3p	1474731	1474737	7mer-m8	1474730	1474752	143	-18.55
CAediting_1368054	chr19_46709310_-	ENSG00000119559.14	ENST00000591027	hsa-miR-320e	1475924	1475931	8mer-1a	1475924	1475941	148	-17.77
CAediting_1524209	chrX_134546392_-	ENSG00000119559.14	ENST00000588427	hsa-miR-503-5p	1461431	1461438	8mer-1a	1461431	1461454	152	-28.45
CAediting_468389	chr6_31355314_-	ENSG00000119559.14	ENST00000588849	hsa-miR-6891-5p	1475038	1475045	8mer-1a	1475038	1475056	145	-22.69
CAediting_468389	chr6_31355314_-	ENSG00000119559.14	ENST00000590621	hsa-miR-6891-5p	1475038	1475045	8mer-1a	1475038	1475056	145	-22.69

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1368054	chr19_46709310_-	ENSG00000119559.14	ENST00000436106	hsa-miR-320e	1473990	1473996	7mer-m8	1473989	1474007	145	-15.01
CAediting_1368054	chr19_46709310_-	ENSG00000119559.14	ENST00000588871	hsa-miR-320e	1473990	1473996	7mer-m8	1473989	1474007	145	-15.01
CAediting_846604	chr11_93733708_-	ENSG00000119559.14	ENST00000588849	hsa-miR-1304-3p	1475317	1475322	6mer	1475316	1475337	150	-21.62

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for C19orf25

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for C19orf25

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
BRCA	CAediting_1271090	chr19_1475514_-	0.0102080144255175	0.19372094214343	.	.	.	.
SKCM	CAediting_1271090	chr19_1475514_-	0.0340574573902793	0.253722949030276	.	.	.	.
TGCT	CAediting_1271090	chr19_1475514_-	0.00388789600870512	0.393637863462444	.	.	.	.

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Relation with cancer stages for C19orf25

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
BRCA	pathologic_stage	CAediting_1271086	chr19_1475463_-	0.0091117203479913	0.342488591989153

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Relation with survival for C19orf25

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for C19orf25

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for C19orf25

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene