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Editing gene: ZNF738 (CAeditome ID:148203)

Gene summary for ZNF738

Gene summary

Gene information	Gene symbol	ZNF738
	Gene ID	148203
	Gene name	zinc finger protein 738
	Synonyms	-
	Cytomap	19p12
	Type of gene	protein-coding
	Description	protein ZNF738
	Modification date	20210518
	UniProtAcc	Q8NE65
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for ZNF738

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000172687.12

RNA A-to-I editing events in Cancer.

CAediting_1327630(21363766, +), CAediting_1327631(21363769, +), CAediting_1327632(21364076, +), CAediting_1327633(21365688, +), CAediting_1327634(21376571, +), CAediting_1327635(21376583, +), CAediting_1327636(21376608, +), CAediting_1327637(21376609, +), CAediting_1327638(21376610, +), CAediting_1327639(21376617, +), CAediting_1327640(21376633, +), CAediting_1327641(21376671, +), CAediting_1327642(21376679, +), CAediting_1327643(21376684, +), CAediting_1327644(21376694, +), CAediting_1327645(21376697, +), CAediting_1327646(21376785, +), CAediting_1327647(21376786, +), CAediting_1327648(21376798, +), CAediting_1327649(21376807, +), CAediting_1327650(21376814, +), CAediting_1327651(21377036, +), CAediting_1327652(21377044, +), CAediting_1327653(21377052, +), CAediting_1327654(21377053, +), CAediting_1327655(21377059, +), CAediting_1327656(21377061, +), CAediting_1327657(21377093, +), CAediting_1327658(21377112, +), CAediting_1327659(21377122, +), CAediting_1327660(21377124, +), CAediting_1327661(21377137, +), CAediting_1327662(21377147, +), CAediting_1327663(21377148, +), CAediting_1327664(21377157, +), CAediting_1327665(21377173, +), CAediting_1327666(21377176, +), CAediting_1327667(21377186, +), CAediting_1327668(21377192, +), CAediting_1327669(21377196, +), CAediting_1327670(21377200, +), CAediting_1327671(21377203, +), CAediting_1327672(21377213, +), CAediting_1327673(21377216, +), CAediting_1327674(21377259, +), CAediting_1327675(21377267, +), CAediting_1327676(21377272, +), CAediting_1327677(21377277, +), CAediting_1327678(21377290, +), CAediting_1327679(21377296, +), CAediting_1327680(21378652, +), CAediting_1327681(21378700, +), CAediting_1327682(21378703, +), CAediting_1327683(21378717, +), CAediting_1327684(21378729, +), CAediting_1327685(21378739, +), CAediting_1327686(21378745, +), CAediting_1327687(21378752, +), CAediting_1327688(21378757, +), CAediting_1327689(21378761, +), CAediting_1327690(21378766, +), CAediting_1327691(21378773, +), CAediting_1327692(21378779, +), CAediting_1327693(21378782, +), CAediting_1327694(21378784, +), CAediting_1327695(21378786, +), CAediting_1327696(21378788, +), CAediting_1327697(21378799, +), CAediting_1327698(21378808, +), CAediting_1327699(21378813, +), CAediting_1327700(21378833, +), CAediting_1327701(21378861, +), CAediting_1327702(21378873, +), CAediting_1327703(21378876, +), CAediting_1327704(21378882, +),

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RNA editing positional annotations for ZNF738 using Annovar

Protein coding RNA editing(s).

CAeditome ID	Position	Variant type	ENST	NTchange	AAchange	SIFT_score	Polyphen2_HVAR_score	PROVEAN_pred
CAediting_1327680	chr19_21378652_+	nonsynonymous SNV	ENST00000380870.7	c.A343G	p.R115G	D	.	N

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1327630	chr19_21363766_+	intronic
CAediting_1327631	chr19_21363769_+	intronic
CAediting_1327632	chr19_21364076_+	intronic
CAediting_1327633	chr19_21365688_+	intronic
CAediting_1327634	chr19_21376571_+	intronic
CAediting_1327635	chr19_21376583_+	intronic
CAediting_1327636	chr19_21376608_+	intronic
CAediting_1327637	chr19_21376609_+	intronic
CAediting_1327638	chr19_21376610_+	intronic
CAediting_1327639	chr19_21376617_+	intronic
CAediting_1327640	chr19_21376633_+	intronic
CAediting_1327641	chr19_21376671_+	intronic
CAediting_1327642	chr19_21376679_+	intronic
CAediting_1327643	chr19_21376684_+	intronic
CAediting_1327644	chr19_21376694_+	intronic
CAediting_1327645	chr19_21376697_+	intronic
CAediting_1327646	chr19_21376785_+	intronic
CAediting_1327647	chr19_21376786_+	intronic
CAediting_1327648	chr19_21376798_+	intronic
CAediting_1327649	chr19_21376807_+	intronic
CAediting_1327650	chr19_21376814_+	intronic
CAediting_1327651	chr19_21377036_+	intronic
CAediting_1327652	chr19_21377044_+	intronic
CAediting_1327653	chr19_21377052_+	intronic
CAediting_1327654	chr19_21377053_+	intronic
CAediting_1327655	chr19_21377059_+	intronic
CAediting_1327656	chr19_21377061_+	intronic
CAediting_1327657	chr19_21377093_+	intronic
CAediting_1327658	chr19_21377112_+	intronic
CAediting_1327659	chr19_21377122_+	intronic
CAediting_1327660	chr19_21377124_+	intronic
CAediting_1327661	chr19_21377137_+	intronic
CAediting_1327662	chr19_21377147_+	intronic
CAediting_1327663	chr19_21377148_+	intronic
CAediting_1327664	chr19_21377157_+	intronic
CAediting_1327665	chr19_21377173_+	intronic
CAediting_1327666	chr19_21377176_+	intronic
CAediting_1327667	chr19_21377186_+	intronic
CAediting_1327668	chr19_21377192_+	intronic
CAediting_1327669	chr19_21377196_+	intronic
CAediting_1327670	chr19_21377200_+	intronic
CAediting_1327671	chr19_21377203_+	intronic
CAediting_1327672	chr19_21377213_+	intronic
CAediting_1327673	chr19_21377216_+	intronic
CAediting_1327674	chr19_21377259_+	intronic
CAediting_1327675	chr19_21377267_+	intronic
CAediting_1327676	chr19_21377272_+	intronic
CAediting_1327677	chr19_21377277_+	intronic
CAediting_1327678	chr19_21377290_+	intronic
CAediting_1327679	chr19_21377296_+	intronic
CAediting_1327680	chr19_21378652_+	exonic
CAediting_1327681	chr19_21378700_+	UTR3
CAediting_1327682	chr19_21378703_+	UTR3
CAediting_1327683	chr19_21378717_+	UTR3
CAediting_1327684	chr19_21378729_+	UTR3
CAediting_1327685	chr19_21378739_+	UTR3
CAediting_1327686	chr19_21378745_+	UTR3
CAediting_1327687	chr19_21378752_+	UTR3
CAediting_1327688	chr19_21378757_+	UTR3
CAediting_1327689	chr19_21378761_+	UTR3
CAediting_1327690	chr19_21378766_+	UTR3
CAediting_1327691	chr19_21378773_+	UTR3
CAediting_1327692	chr19_21378779_+	UTR3
CAediting_1327693	chr19_21378782_+	UTR3
CAediting_1327694	chr19_21378784_+	UTR3
CAediting_1327695	chr19_21378786_+	UTR3
CAediting_1327696	chr19_21378788_+	UTR3
CAediting_1327697	chr19_21378799_+	UTR3
CAediting_1327698	chr19_21378808_+	UTR3
CAediting_1327699	chr19_21378813_+	UTR3
CAediting_1327700	chr19_21378833_+	UTR3
CAediting_1327701	chr19_21378861_+	UTR3
CAediting_1327702	chr19_21378873_+	UTR3
CAediting_1327703	chr19_21378876_+	UTR3
CAediting_1327704	chr19_21378882_+	UTR3

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1327630	chr19_21363766_+	SINE	Alu	AluSx1
CAediting_1327631	chr19_21363769_+	SINE	Alu	AluSx1
CAediting_1327632	chr19_21364076_+	SINE	Alu	AluSx
CAediting_1327633	chr19_21365688_+	SINE	Alu	AluSz
CAediting_1327634	chr19_21376571_+	SINE	Alu	AluSp
CAediting_1327635	chr19_21376583_+	SINE	Alu	AluSp
CAediting_1327636	chr19_21376608_+	SINE	Alu	AluSp
CAediting_1327637	chr19_21376609_+	SINE	Alu	AluSp
CAediting_1327638	chr19_21376610_+	SINE	Alu	AluSp
CAediting_1327639	chr19_21376617_+	SINE	Alu	AluSp
CAediting_1327640	chr19_21376633_+	SINE	Alu	AluSp
CAediting_1327641	chr19_21376671_+	SINE	Alu	AluSp
CAediting_1327642	chr19_21376679_+	SINE	Alu	AluSp
CAediting_1327643	chr19_21376684_+	SINE	Alu	AluSp
CAediting_1327644	chr19_21376694_+	SINE	Alu	AluSp
CAediting_1327645	chr19_21376697_+	SINE	Alu	AluSp
CAediting_1327646	chr19_21376785_+	SINE	Alu	AluSp
CAediting_1327647	chr19_21376786_+	SINE	Alu	AluSp
CAediting_1327648	chr19_21376798_+	SINE	Alu	AluSp
CAediting_1327649	chr19_21376807_+	SINE	Alu	AluSp
CAediting_1327650	chr19_21376814_+	SINE	Alu	AluSp
CAediting_1327651	chr19_21377036_+	SINE	Alu	AluSp
CAediting_1327652	chr19_21377044_+	SINE	Alu	AluSp
CAediting_1327653	chr19_21377052_+	SINE	Alu	AluSp
CAediting_1327654	chr19_21377053_+	SINE	Alu	AluSp
CAediting_1327655	chr19_21377059_+	SINE	Alu	AluSp
CAediting_1327656	chr19_21377061_+	SINE	Alu	AluSp
CAediting_1327657	chr19_21377093_+	SINE	Alu	AluSp
CAediting_1327658	chr19_21377112_+	SINE	Alu	AluSp
CAediting_1327659	chr19_21377122_+	SINE	Alu	AluSp
CAediting_1327660	chr19_21377124_+	SINE	Alu	AluSp
CAediting_1327661	chr19_21377137_+	SINE	Alu	AluSp
CAediting_1327662	chr19_21377147_+	SINE	Alu	AluSp
CAediting_1327663	chr19_21377148_+	SINE	Alu	AluSp
CAediting_1327664	chr19_21377157_+	SINE	Alu	AluSp
CAediting_1327665	chr19_21377173_+	SINE	Alu	AluSp
CAediting_1327666	chr19_21377176_+	SINE	Alu	AluSp
CAediting_1327667	chr19_21377186_+	SINE	Alu	AluSp
CAediting_1327668	chr19_21377192_+	SINE	Alu	AluSp
CAediting_1327669	chr19_21377196_+	SINE	Alu	AluSp
CAediting_1327670	chr19_21377200_+	SINE	Alu	AluSp
CAediting_1327671	chr19_21377203_+	SINE	Alu	AluSp
CAediting_1327672	chr19_21377213_+	SINE	Alu	AluSp
CAediting_1327673	chr19_21377216_+	SINE	Alu	AluSp
CAediting_1327674	chr19_21377259_+	SINE	Alu	AluSp
CAediting_1327675	chr19_21377267_+	SINE	Alu	AluSp
CAediting_1327676	chr19_21377272_+	SINE	Alu	AluSp
CAediting_1327677	chr19_21377277_+	SINE	Alu	AluSp
CAediting_1327678	chr19_21377290_+	SINE	Alu	AluSp
CAediting_1327679	chr19_21377296_+	SINE	Alu	AluSp
CAediting_1327680	chr19_21378652_+	SINE	Alu	AluSp
CAediting_1327681	chr19_21378700_+	SINE	Alu	AluSp
CAediting_1327682	chr19_21378703_+	SINE	Alu	AluSp
CAediting_1327683	chr19_21378717_+	SINE	Alu	AluSp
CAediting_1327684	chr19_21378729_+	SINE	Alu	AluSp
CAediting_1327685	chr19_21378739_+	SINE	Alu	AluSp
CAediting_1327686	chr19_21378745_+	SINE	Alu	AluSp
CAediting_1327687	chr19_21378752_+	SINE	Alu	AluSp
CAediting_1327688	chr19_21378757_+	SINE	Alu	AluSp
CAediting_1327689	chr19_21378761_+	SINE	Alu	AluSp
CAediting_1327690	chr19_21378766_+	SINE	Alu	AluSp
CAediting_1327691	chr19_21378773_+	SINE	Alu	AluSp
CAediting_1327692	chr19_21378779_+	SINE	Alu	AluSp
CAediting_1327693	chr19_21378782_+	SINE	Alu	AluSp
CAediting_1327694	chr19_21378784_+	SINE	Alu	AluSp
CAediting_1327695	chr19_21378786_+	SINE	Alu	AluSp
CAediting_1327696	chr19_21378788_+	SINE	Alu	AluSp
CAediting_1327697	chr19_21378799_+	SINE	Alu	AluSp
CAediting_1327698	chr19_21378808_+	SINE	Alu	AluSp
CAediting_1327699	chr19_21378813_+	SINE	Alu	AluSp
CAediting_1327700	chr19_21378833_+	SINE	Alu	AluSp
CAediting_1327701	chr19_21378861_+	SINE	Alu	AluSp
CAediting_1327702	chr19_21378873_+	SINE	Alu	AluSp
CAediting_1327703	chr19_21378876_+	SINE	Alu	AluSp
CAediting_1327704	chr19_21378882_+	SINE	Alu	AluSp

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RNA A-to-I editing events in the alternative splicing sites for ZNF738

RNA A-to-I editing(s) in the alternative splicing sites.

AStype	CAeditomID	Editing position	AS position	AS direction	Exonic location	Wildtype sequence	Wildtype splicing strength	RNA edited sequence	RNA edited splicing strength
IR	CAediting_1327680	chr19_21378652_+	21378633:21378655	3SS	0+1i	AGTTTCACTGTTGTTCCCCAGGC	-9.62	AGTTTCACTGTTGTTCCCCGGGC	-0.87

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000172687.12.ZNF738.

Correlation between RNA A-to-I editing and PSI for ENSG00000172687.12.ZNF738.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for ZNF738

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for ZNF738

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for ZNF738

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1327680	chr19_21378652_+	ENSG00000172687.12	ENST00000311015	hsa-miR-1538	21378649	21378655	7mer-m8	21378634	21378656	155.00	-27.67
CAediting_1327680	chr19_21378652_+	ENSG00000172687.12	ENST00000311015	hsa-miR-4745-3p	21378649	21378655	7mer-m8	21378634	21378656	147.00	-25.28
CAediting_1327680	chr19_21378652_+	ENSG00000172687.12	ENST00000311015	hsa-miR-6777-5p	21378646	21378651	6mer	21378632	21378652	143.00	-24.91
CAediting_1327684	chr19_21378729_+	ENSG00000172687.12	ENST00000311015	hsa-miR-4691-3p	21378726	21378732	7mer-m8	21378707	21378733	152.00	-28.24
CAediting_1327684	chr19_21378729_+	ENSG00000172687.12	ENST00000380870	hsa-miR-4691-3p	21378726	21378732	7mer-m8	21378707	21378733	152.00	-28.24
CAediting_1327686	chr19_21378745_+	ENSG00000172687.12	ENST00000311015	hsa-miR-5689	21378744	21378749	6mer	21378729	21378750	156.00	-33.62
CAediting_1327686	chr19_21378745_+	ENSG00000172687.12	ENST00000380870	hsa-miR-5689	21378744	21378749	6mer	21378729	21378750	156.00	-33.62
CAediting_1327687	chr19_21378752_+	ENSG00000172687.12	ENST00000311015	hsa-miR-6770-3p	21378748	21378754	7mer-m8	21378734	21378755	154.00	-21.84
CAediting_1327687	chr19_21378752_+	ENSG00000172687.12	ENST00000311015	hsa-miR-6770-3p	21378748	21378754	7mer-m8	21378734	21378755	154.00	-21.84
CAediting_1327687	chr19_21378752_+	ENSG00000172687.12	ENST00000311015	hsa-miR-6770-3p	21378748	21378754	7mer-m8	21378734	21378755	154.00	-21.84
CAediting_1327687	chr19_21378752_+	ENSG00000172687.12	ENST00000380870	hsa-miR-6770-3p	21378748	21378754	7mer-m8	21378734	21378755	154.00	-21.84
CAediting_1327687	chr19_21378752_+	ENSG00000172687.12	ENST00000380870	hsa-miR-6770-3p	21378748	21378754	7mer-m8	21378734	21378755	154.00	-21.84
CAediting_1327687	chr19_21378752_+	ENSG00000172687.12	ENST00000380870	hsa-miR-6770-3p	21378748	21378754	7mer-m8	21378734	21378755	154.00	-21.84
CAediting_1327688	chr19_21378757_+	ENSG00000172687.12	ENST00000311015	hsa-miR-1268a	21378753	21378760	8mer-1a	21378743	21378760	162.00	-26.50
CAediting_1327688	chr19_21378757_+	ENSG00000172687.12	ENST00000311015	hsa-miR-1268b	21378753	21378760	8mer-1a	21378741	21378760	162.00	-29.02
CAediting_1327688	chr19_21378757_+	ENSG00000172687.12	ENST00000311015	hsa-miR-4486	21378755	21378761	7mer-m8	21378747	21378762	153.00	-28.71
CAediting_1327688	chr19_21378757_+	ENSG00000172687.12	ENST00000380870	hsa-miR-1268a	21378753	21378760	8mer-1a	21378743	21378760	162.00	-26.50
CAediting_1327688	chr19_21378757_+	ENSG00000172687.12	ENST00000380870	hsa-miR-1268b	21378753	21378760	8mer-1a	21378741	21378760	162.00	-29.02
CAediting_1327688	chr19_21378757_+	ENSG00000172687.12	ENST00000380870	hsa-miR-4486	21378755	21378761	7mer-m8	21378747	21378762	153.00	-28.71
CAediting_1327696	chr19_21378788_+	ENSG00000172687.12	ENST00000311015	hsa-miR-340-3p	21378782	21378788	7mer-m8	21378768	21378789	149.00	-17.74
CAediting_1327696	chr19_21378788_+	ENSG00000172687.12	ENST00000311015	hsa-miR-6827-3p	21378782	21378788	7mer-m8	21378769	21378789	153.00	-17.53
CAediting_1327696	chr19_21378788_+	ENSG00000172687.12	ENST00000380870	hsa-miR-340-3p	21378782	21378788	7mer-m8	21378768	21378789	149.00	-17.74
CAediting_1327696	chr19_21378788_+	ENSG00000172687.12	ENST00000380870	hsa-miR-6827-3p	21378782	21378788	7mer-m8	21378769	21378789	153.00	-17.53
CAediting_1327699	chr19_21378813_+	ENSG00000172687.12	ENST00000311015	hsa-miR-4786-5p	21378811	21378817	7mer-m8	21378793	21378818	154.00	-25.28
CAediting_1327699	chr19_21378813_+	ENSG00000172687.12	ENST00000311015	hsa-miR-6849-3p	21378807	21378813	7mer-m8	21378794	21378814	152.00	-21.45
CAediting_1327699	chr19_21378813_+	ENSG00000172687.12	ENST00000380870	hsa-miR-4786-5p	21378811	21378817	7mer-m8	21378793	21378818	154.00	-25.28
CAediting_1327699	chr19_21378813_+	ENSG00000172687.12	ENST00000380870	hsa-miR-6849-3p	21378807	21378813	7mer-m8	21378794	21378814	152.00	-21.45
CAediting_1327701	chr19_21378861_+	ENSG00000172687.12	ENST00000311015	hsa-miR-3189-3p	21378855	21378861	7mer-m8	21378839	21378862	157.00	-25.36
CAediting_1327701	chr19_21378861_+	ENSG00000172687.12	ENST00000311015	hsa-miR-6813-3p	21378856	21378862	7mer-m8	21378843	21378863	140.00	-10.68
CAediting_1327701	chr19_21378861_+	ENSG00000172687.12	ENST00000380870	hsa-miR-3189-3p	21378855	21378861	7mer-m8	21378839	21378862	157.00	-25.36
CAediting_1327701	chr19_21378861_+	ENSG00000172687.12	ENST00000380870	hsa-miR-6813-3p	21378856	21378862	7mer-m8	21378843	21378863	140.00	-10.68
CAediting_1327702	chr19_21378873_+	ENSG00000172687.12	ENST00000311015	hsa-miR-4327	21378871	21378877	7mer-m8	21378858	21378878	144.00	-16.88
CAediting_1327702	chr19_21378873_+	ENSG00000172687.12	ENST00000380870	hsa-miR-4327	21378871	21378877	7mer-m8	21378858	21378878	144.00	-16.88
CAediting_1327695	chr19_21378786_+	ENSG00000172687.12	ENST00000311015	hsa-miR-6747-3p	21378783	21378789	7mer-m8	21378769	21378790	143.00	-17.96
CAediting_1327695	chr19_21378786_+	ENSG00000172687.12	ENST00000311015	hsa-miR-6752-3p	21378784	21378790	7mer-m8	21378773	21378791	149.00	-18.23
CAediting_1327695	chr19_21378786_+	ENSG00000172687.12	ENST00000380870	hsa-miR-6747-3p	21378783	21378789	7mer-m8	21378769	21378790	143.00	-17.96
CAediting_1327695	chr19_21378786_+	ENSG00000172687.12	ENST00000380870	hsa-miR-6752-3p	21378784	21378790	7mer-m8	21378773	21378791	149.00	-18.23

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1327703	chr19_21378876_+	ENSG00000172687.12	ENST00000311015	hsa-miR-100-3p	21378873	21378879	7mer-m8	21378860	21378880	154	-23.23
CAediting_1327696	chr19_21378788_+	ENSG00000172687.12	ENST00000311015	hsa-miR-10a-5p	21378785	21378791	7mer-m8	21378770	21378792	145	-13.67
CAediting_1327696	chr19_21378788_+	ENSG00000172687.12	ENST00000311015	hsa-miR-10b-5p	21378785	21378791	7mer-m8	21378770	21378792	140	-13.05
CAediting_1327680	chr19_21378652_+	ENSG00000172687.12	ENST00000311015	hsa-miR-1234-3p	21378650	21378656	7mer-m8	21378636	21378657	145	-16.45
CAediting_1327697	chr19_21378799_+	ENSG00000172687.12	ENST00000311015	hsa-miR-1843	21378794	21378799	6mer	21378780	21378800	148	-25.98
CAediting_1327680	chr19_21378652_+	ENSG00000172687.12	ENST00000311015	hsa-miR-2110	21378645	21378651	7mer-m8	21378633	21378652	152	-20.37
CAediting_1327695	chr19_21378786_+	ENSG00000172687.12	ENST00000311015	hsa-miR-339-5p	21378784	21378790	7mer-m8	21378767	21378791	151	-18.58
CAediting_1327696	chr19_21378788_+	ENSG00000172687.12	ENST00000311015	hsa-miR-339-5p	21378784	21378790	7mer-m8	21378767	21378791	151	-18.58
CAediting_1327700	chr19_21378833_+	ENSG00000172687.12	ENST00000311015	hsa-miR-3622a-3p	21378830	21378837	8mer-1a	21378816	21378837	144	-14.14
CAediting_1327700	chr19_21378833_+	ENSG00000172687.12	ENST00000311015	hsa-miR-3622b-3p	21378830	21378837	8mer-1a	21378817	21378837	153	-18.81
CAediting_1327698	chr19_21378808_+	ENSG00000172687.12	ENST00000311015	hsa-miR-4293	21378805	21378812	8mer-1a	21378796	21378812	146	-16.68
CAediting_1327695	chr19_21378786_+	ENSG00000172687.12	ENST00000311015	hsa-miR-4421	21378783	21378789	7mer-m8	21378769	21378790	154	-16.19
CAediting_1327696	chr19_21378788_+	ENSG00000172687.12	ENST00000311015	hsa-miR-4421	21378783	21378789	7mer-m8	21378769	21378790	154	-16.19
CAediting_1327688	chr19_21378757_+	ENSG00000172687.12	ENST00000311015	hsa-miR-4455	21378753	21378760	8mer-1a	21378745	21378760	146	-16.7
CAediting_1327683	chr19_21378717_+	ENSG00000172687.12	ENST00000311015	hsa-miR-4478	21378714	21378720	7mer-m8	21378706	21378721	153	-26.03
CAediting_1327697	chr19_21378799_+	ENSG00000172687.12	ENST00000311015	hsa-miR-4531	21378792	21378798	7mer-m8	21378783	21378799	151	-18.2
CAediting_1327683	chr19_21378717_+	ENSG00000172687.12	ENST00000311015	hsa-miR-485-5p	21378715	21378721	7mer-m8	21378701	21378722	145	-18.55
CAediting_1327700	chr19_21378833_+	ENSG00000172687.12	ENST00000311015	hsa-miR-544b	21378828	21378834	7mer-m8	21378814	21378835	149	-19.04
CAediting_1327689	chr19_21378761_+	ENSG00000172687.12	ENST00000311015	hsa-miR-5589-5p	21378756	21378762	7mer-m8	21378745	21378763	151	-20.45
CAediting_1327684	chr19_21378729_+	ENSG00000172687.12	ENST00000311015	hsa-miR-5690	21378726	21378732	7mer-m8	21378713	21378733	145	-16.75
CAediting_1327695	chr19_21378786_+	ENSG00000172687.12	ENST00000311015	hsa-miR-5699-3p	21378783	21378789	7mer-m8	21378769	21378790	153	-17.34
CAediting_1327696	chr19_21378788_+	ENSG00000172687.12	ENST00000311015	hsa-miR-5699-3p	21378783	21378789	7mer-m8	21378769	21378790	153	-17.34
CAediting_1327693	chr19_21378782_+	ENSG00000172687.12	ENST00000311015	hsa-miR-593-3p	21378781	21378787	7mer-1a	21378769	21378787	140	-19.02
CAediting_1327694	chr19_21378784_+	ENSG00000172687.12	ENST00000311015	hsa-miR-593-3p	21378781	21378787	7mer-1a	21378769	21378787	140	-19.02
CAediting_1327695	chr19_21378786_+	ENSG00000172687.12	ENST00000311015	hsa-miR-593-3p	21378781	21378787	7mer-1a	21378769	21378787	140	-19.02
CAediting_1327680	chr19_21378652_+	ENSG00000172687.12	ENST00000311015	hsa-miR-661	21378648	21378654	7mer-m8	21378632	21378655	140	-14.96
CAediting_1327688	chr19_21378757_+	ENSG00000172687.12	ENST00000311015	hsa-miR-6776-5p	21378755	21378761	7mer-m8	21378744	21378762	154	-21.51
CAediting_1327689	chr19_21378761_+	ENSG00000172687.12	ENST00000311015	hsa-miR-6776-5p	21378755	21378761	7mer-m8	21378744	21378762	154	-21.51
CAediting_1327694	chr19_21378784_+	ENSG00000172687.12	ENST00000311015	hsa-miR-6818-3p	21378781	21378787	7mer-m8	21378767	21378788	140	-12.56
CAediting_1327695	chr19_21378786_+	ENSG00000172687.12	ENST00000311015	hsa-miR-6818-3p	21378781	21378787	7mer-m8	21378767	21378788	140	-12.56
CAediting_1327696	chr19_21378788_+	ENSG00000172687.12	ENST00000311015	hsa-miR-6818-3p	21378781	21378787	7mer-m8	21378767	21378788	140	-12.56
CAediting_1327680	chr19_21378652_+	ENSG00000172687.12	ENST00000311015	hsa-miR-6852-5p	21378647	21378653	7mer-m8	21378632	21378654	141	-17.81
CAediting_1327704	chr19_21378882_+	ENSG00000172687.12	ENST00000311015	hsa-miR-6854-5p	21378879	21378885	7mer-1a	21378862	21378885	151	-21.36
CAediting_1327683	chr19_21378717_+	ENSG00000172687.12	ENST00000311015	hsa-miR-7160-5p	21378712	21378718	7mer-m8	21378697	21378719	153	-21.4
CAediting_1327680	chr19_21378652_+	ENSG00000172687.12	ENST00000311015	hsa-miR-8089	21378646	21378652	7mer-m8	21378631	21378653	152	-28.29
CAediting_1327703	chr19_21378876_+	ENSG00000172687.12	ENST00000380870	hsa-miR-100-3p	21378873	21378879	7mer-m8	21378860	21378880	154	-23.23
CAediting_1327696	chr19_21378788_+	ENSG00000172687.12	ENST00000380870	hsa-miR-10a-5p	21378785	21378791	7mer-m8	21378770	21378792	145	-13.67
CAediting_1327696	chr19_21378788_+	ENSG00000172687.12	ENST00000380870	hsa-miR-10b-5p	21378785	21378791	7mer-m8	21378770	21378792	140	-13.05
CAediting_1327697	chr19_21378799_+	ENSG00000172687.12	ENST00000380870	hsa-miR-1843	21378794	21378799	6mer	21378780	21378800	148	-25.98
CAediting_1327695	chr19_21378786_+	ENSG00000172687.12	ENST00000380870	hsa-miR-339-5p	21378784	21378790	7mer-m8	21378767	21378791	151	-18.58
CAediting_1327696	chr19_21378788_+	ENSG00000172687.12	ENST00000380870	hsa-miR-339-5p	21378784	21378790	7mer-m8	21378767	21378791	151	-18.58
CAediting_1327700	chr19_21378833_+	ENSG00000172687.12	ENST00000380870	hsa-miR-3622a-3p	21378830	21378837	8mer-1a	21378816	21378837	144	-14.14
CAediting_1327700	chr19_21378833_+	ENSG00000172687.12	ENST00000380870	hsa-miR-3622b-3p	21378830	21378837	8mer-1a	21378817	21378837	153	-18.81
CAediting_1327698	chr19_21378808_+	ENSG00000172687.12	ENST00000380870	hsa-miR-4293	21378805	21378812	8mer-1a	21378796	21378812	146	-16.68
CAediting_1327695	chr19_21378786_+	ENSG00000172687.12	ENST00000380870	hsa-miR-4421	21378783	21378789	7mer-m8	21378769	21378790	154	-16.19
CAediting_1327696	chr19_21378788_+	ENSG00000172687.12	ENST00000380870	hsa-miR-4421	21378783	21378789	7mer-m8	21378769	21378790	154	-16.19
CAediting_1327688	chr19_21378757_+	ENSG00000172687.12	ENST00000380870	hsa-miR-4455	21378753	21378760	8mer-1a	21378745	21378760	146	-16.7
CAediting_1327683	chr19_21378717_+	ENSG00000172687.12	ENST00000380870	hsa-miR-4478	21378714	21378720	7mer-m8	21378706	21378721	153	-26.03
CAediting_1327697	chr19_21378799_+	ENSG00000172687.12	ENST00000380870	hsa-miR-4531	21378792	21378798	7mer-m8	21378783	21378799	151	-18.2
CAediting_1327683	chr19_21378717_+	ENSG00000172687.12	ENST00000380870	hsa-miR-485-5p	21378715	21378721	7mer-m8	21378701	21378722	145	-18.55
CAediting_1327700	chr19_21378833_+	ENSG00000172687.12	ENST00000380870	hsa-miR-544b	21378828	21378834	7mer-m8	21378814	21378835	149	-19.04
CAediting_1327689	chr19_21378761_+	ENSG00000172687.12	ENST00000380870	hsa-miR-5589-5p	21378756	21378762	7mer-m8	21378745	21378763	151	-20.45
CAediting_1327684	chr19_21378729_+	ENSG00000172687.12	ENST00000380870	hsa-miR-5690	21378726	21378732	7mer-m8	21378713	21378733	145	-16.75
CAediting_1327695	chr19_21378786_+	ENSG00000172687.12	ENST00000380870	hsa-miR-5699-3p	21378783	21378789	7mer-m8	21378769	21378790	153	-17.34
CAediting_1327696	chr19_21378788_+	ENSG00000172687.12	ENST00000380870	hsa-miR-5699-3p	21378783	21378789	7mer-m8	21378769	21378790	153	-17.34
CAediting_1327693	chr19_21378782_+	ENSG00000172687.12	ENST00000380870	hsa-miR-593-3p	21378781	21378787	7mer-1a	21378769	21378787	140	-19.02
CAediting_1327694	chr19_21378784_+	ENSG00000172687.12	ENST00000380870	hsa-miR-593-3p	21378781	21378787	7mer-1a	21378769	21378787	140	-19.02
CAediting_1327695	chr19_21378786_+	ENSG00000172687.12	ENST00000380870	hsa-miR-593-3p	21378781	21378787	7mer-1a	21378769	21378787	140	-19.02
CAediting_1327688	chr19_21378757_+	ENSG00000172687.12	ENST00000380870	hsa-miR-6776-5p	21378755	21378761	7mer-m8	21378744	21378762	154	-21.51
CAediting_1327689	chr19_21378761_+	ENSG00000172687.12	ENST00000380870	hsa-miR-6776-5p	21378755	21378761	7mer-m8	21378744	21378762	154	-21.51
CAediting_1327694	chr19_21378784_+	ENSG00000172687.12	ENST00000380870	hsa-miR-6818-3p	21378781	21378787	7mer-m8	21378767	21378788	140	-12.56
CAediting_1327695	chr19_21378786_+	ENSG00000172687.12	ENST00000380870	hsa-miR-6818-3p	21378781	21378787	7mer-m8	21378767	21378788	140	-12.56
CAediting_1327696	chr19_21378788_+	ENSG00000172687.12	ENST00000380870	hsa-miR-6818-3p	21378781	21378787	7mer-m8	21378767	21378788	140	-12.56
CAediting_1327704	chr19_21378882_+	ENSG00000172687.12	ENST00000380870	hsa-miR-6854-5p	21378879	21378885	7mer-1a	21378862	21378885	151	-21.36
CAediting_1327683	chr19_21378717_+	ENSG00000172687.12	ENST00000380870	hsa-miR-7160-5p	21378712	21378718	7mer-m8	21378697	21378719	153	-21.4

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_980496	chr14_31014685_-	ENSG00000172687.12	ENST00000311015	hsa-miR-624-3p	21379257	21379262	6mer	21379244	21379263	149	-20.17
CAediting_980496	chr14_31014685_-	ENSG00000172687.12	ENST00000380870	hsa-miR-624-3p	21379257	21379262	6mer	21379244	21379263	149	-20.17
CAediting_1229415	chr17_67471547_+	ENSG00000172687.12	ENST00000311015	hsa-miR-548aa	21377652	21377658	7mer-m8	21377635	21377659	153	-15.91
CAediting_1351755	chr19_40282625_-	ENSG00000172687.12	ENST00000311015	hsa-miR-641	21377834	21377840	7mer-m8	21377814	21377841	148	-16.45
CAediting_1229414	chr17_67471546_+	ENSG00000172687.12	ENST00000594245	hsa-miR-548aa	21372154	21372160	7mer-m8	21372137	21372161	144	-12.97
CAediting_1160181	chr17_7017644_-	ENSG00000172687.12	ENST00000594245	hsa-miR-195-3p	21372819	21372825	7mer-m8	21372805	21372826	152	-8.67
CAediting_524911	chr7_5495852_-	ENSG00000172687.12	ENST00000594245	hsa-miR-589-3p	21372777	21372783	7mer-m8	21372760	21372784	147	-16.86

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1351755	chr19_40282625_-	ENSG00000172687.12	ENST00000311015	hsa-miR-641	21377577	21377583	7mer-m8	21377560	21377584	153	-12.29
CAediting_1229415	chr17_67471547_+	ENSG00000172687.12	ENST00000597492	hsa-miR-548aa	21376397	21376403	7mer-m8	21376379	21376404	146	-13.58
CAediting_1229413	chr17_67471544_+	ENSG00000172687.12	ENST00000597492	hsa-miR-548aa	21376397	21376403	7mer-m8	21376379	21376404	146	-13.58
CAediting_1229414	chr17_67471546_+	ENSG00000172687.12	ENST00000597492	hsa-miR-548aa	21376397	21376403	7mer-m8	21376379	21376404	146	-13.58
CAediting_228905	chr2_188297554_+	ENSG00000172687.12	ENST00000597492	hsa-miR-561-3p	21376318	21376325	8mer-1a	21376301	21376325	151	-9.28

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for ZNF738

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for ZNF738

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
LGG	CAediting_1327637	chr19_21376609_+	.	.	.	.	0.00213112805315305	0.308212207963734
OV	CAediting_1327637	chr19_21376609_+	0.0296139082429496	0.20383015037971	.	.	.	.
LGG	CAediting_1327638	chr19_21376610_+	.	.	.	.	0.0053594331699021	0.282100603662557
LGG	CAediting_1327665	chr19_21377173_+	.	.	.	.	0.035719759331928	0.209253352932267
OV	CAediting_1327665	chr19_21377173_+	0.00191061407521902	0.303768033730145	.	.	.	.
OV	CAediting_1327666	chr19_21377176_+	0.00223193571820006	0.36729518326322	.	.	.	.
LGG	CAediting_1327670	chr19_21377200_+	.	.	.	.	0.000102588361596515	0.302243965475489
BRCA	CAediting_1327670	chr19_21377200_+	0.0057937331123863	0.349306932365228	.	.	.	.
OV	CAediting_1327670	chr19_21377200_+	0.00200482746883567	0.271661357977828	.	.	.	.

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Relation with cancer stages for ZNF738

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for ZNF738

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

Top

RelatedDrugs for ZNF738

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

Top

RelatedDiseases for ZNF738

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene