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Editing gene: TPM3P9 (CAeditome ID:147804)

Gene summary for TPM3P9

Gene summary

Gene information	Gene symbol	TPM3P9
	Gene ID	147804
	Gene name	tropomyosin 3 pseudogene 9
	Synonyms	-
	Cytomap	19q13.42
	Type of gene	pseudo
	Description	-
	Modification date	20210518
	UniProtAcc	.
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for TPM3P9

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000241015.2

RNA A-to-I editing events in Cancer.

CAediting_1387196(53435391, +), CAediting_1387197(53435404, +), CAediting_1387198(53435405, +), CAediting_1387199(53435444, +), CAediting_1387200(53437062, +), CAediting_1387201(53437063, +), CAediting_1387202(53437160, +), CAediting_1387203(53437171, +), CAediting_1387204(53437187, +), CAediting_1387205(53437197, +), CAediting_1387206(53437221, +), CAediting_1387207(53437225, +), CAediting_1387208(53437226, +), CAediting_1387209(53437230, +), CAediting_1387210(53437238, +), CAediting_1387211(53437239, +), CAediting_1387212(53437247, +), CAediting_1387213(53437250, +), CAediting_1387214(53437259, +), CAediting_1387215(53437267, +), CAediting_1387216(53437275, +), CAediting_1387217(53437300, +), CAediting_1387218(53437306, +), CAediting_1387219(53439025, +), CAediting_1387220(53439061, +), CAediting_1387221(53439070, +), CAediting_1387222(53439075, +), CAediting_1387223(53439095, +), CAediting_1387224(53439112, +), CAediting_1387225(53439115, +), CAediting_1387226(53439119, +), CAediting_1387227(53439124, +), CAediting_1387228(53439140, +), CAediting_1387229(53439156, +), CAediting_1387230(53439160, +), CAediting_1387231(53439164, +), CAediting_1387232(53439173, +), CAediting_1387233(53439177, +), CAediting_1387234(53439191, +), CAediting_1387235(53439192, +), CAediting_1387236(53439196, +), CAediting_1387237(53439203, +), CAediting_1387238(53439205, +), CAediting_1387239(53439216, +), CAediting_1387240(53439221, +), CAediting_1387241(53439253, +), CAediting_1387242(53439325, +), CAediting_1387243(53439345, +), CAediting_1387244(53439386, +), CAediting_1387245(53439410, +), CAediting_1387246(53439423, +), CAediting_1387247(53439432, +), CAediting_1387248(53439433, +), CAediting_1387249(53439435, +), CAediting_1387250(53440062, +), CAediting_1387251(53440089, +), CAediting_1387252(53440102, +), CAediting_1387253(53440107, +), CAediting_1387254(53440116, +), CAediting_1387255(53440177, +), CAediting_1387256(53440214, +), CAediting_1387257(53440218, +), CAediting_1387258(53440231, +), CAediting_1387259(53440244, +), CAediting_1387260(53440249, +), CAediting_1387261(53440254, +), CAediting_1387262(53440258, +), CAediting_1387263(53440274, +), CAediting_1387264(53440308, +), CAediting_1387265(53440311, +), CAediting_1387266(53440699, +), CAediting_1387267(53440701, +), CAediting_1387268(53440740, +), CAediting_1387269(53440749, +), CAediting_1387270(53440750, +), CAediting_1387271(53440755, +), CAediting_1387272(53440775, +), CAediting_1387273(53440776, +), CAediting_1387274(53440777, +), CAediting_1387275(53440793, +), CAediting_1387276(53440805, +), CAediting_1387277(53440809, +), CAediting_1387278(53440810, +), CAediting_1387279(53440831, +), CAediting_1387280(53440832, +), CAediting_1387281(53440841, +), CAediting_1387282(53440860, +), CAediting_1387283(53440863, +), CAediting_1387284(53440864, +), CAediting_1387285(53440873, +), CAediting_1387286(53440885, +), CAediting_1387287(53440912, +), CAediting_1387288(53440937, +), CAediting_1387289(53440938, +), CAediting_1387290(53440939, +), CAediting_1387291(53440941, +), CAediting_1387292(53440950, +), CAediting_1387293(53440958, +), CAediting_1387294(53440968, +), CAediting_1387295(53441026, +), CAediting_1387296(53441066, +), CAediting_1387297(53441067, +), CAediting_1387298(53441072, +), CAediting_1387299(53441075, +), CAediting_1387300(53441080, +), CAediting_1387301(53441081, +), CAediting_1387302(53441083, +), CAediting_1387303(53441096, +), CAediting_1387304(53441106, +), CAediting_1387305(53441120, +), CAediting_1387306(53441121, +), CAediting_1387307(53441123, +), CAediting_1387308(53441124, +), CAediting_1387309(53441126, +), CAediting_1387310(53441129, +), CAediting_1387311(53441130, +), CAediting_1387312(53441131, +), CAediting_1387313(53441135, +), CAediting_1387314(53441139, +), CAediting_1387315(53441161, +), CAediting_1387316(53441167, +), CAediting_1387317(53441171, +), CAediting_1387318(53441194, +), CAediting_1387319(53441197, +), CAediting_1387320(53441201, +), CAediting_1387321(53441202, +), CAediting_1387322(53441214, +), CAediting_1387323(53441526, +), CAediting_1387324(53441546, +), CAediting_1387325(53441551, +), CAediting_1387326(53441586, +), CAediting_1387327(53441588, +), CAediting_1387328(53441599, +), CAediting_1387329(53441604, +), CAediting_1387330(53441608, +), CAediting_1387331(53441627, +), CAediting_1387332(53441630, +), CAediting_1387333(53441669, +), CAediting_1387334(53441681, +), CAediting_1387335(53444007, +), CAediting_1387336(53444071, +), CAediting_1387337(53444076, +),

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RNA editing positional annotations for TPM3P9 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1387196	chr19_53435391_+	ncRNA_intronic
CAediting_1387197	chr19_53435404_+	ncRNA_intronic
CAediting_1387198	chr19_53435405_+	ncRNA_intronic
CAediting_1387199	chr19_53435444_+	ncRNA_intronic
CAediting_1387200	chr19_53437062_+	ncRNA_intronic
CAediting_1387201	chr19_53437063_+	ncRNA_intronic
CAediting_1387202	chr19_53437160_+	ncRNA_intronic
CAediting_1387203	chr19_53437171_+	ncRNA_intronic
CAediting_1387204	chr19_53437187_+	ncRNA_intronic
CAediting_1387205	chr19_53437197_+	ncRNA_intronic
CAediting_1387206	chr19_53437221_+	ncRNA_intronic
CAediting_1387207	chr19_53437225_+	ncRNA_intronic
CAediting_1387208	chr19_53437226_+	ncRNA_intronic
CAediting_1387209	chr19_53437230_+	ncRNA_intronic
CAediting_1387210	chr19_53437238_+	ncRNA_intronic
CAediting_1387211	chr19_53437239_+	ncRNA_intronic
CAediting_1387212	chr19_53437247_+	ncRNA_intronic
CAediting_1387213	chr19_53437250_+	ncRNA_intronic
CAediting_1387214	chr19_53437259_+	ncRNA_intronic
CAediting_1387215	chr19_53437267_+	ncRNA_intronic
CAediting_1387216	chr19_53437275_+	ncRNA_intronic
CAediting_1387217	chr19_53437300_+	ncRNA_intronic
CAediting_1387218	chr19_53437306_+	ncRNA_intronic
CAediting_1387219	chr19_53439025_+	ncRNA_intronic
CAediting_1387220	chr19_53439061_+	ncRNA_intronic
CAediting_1387221	chr19_53439070_+	ncRNA_intronic
CAediting_1387222	chr19_53439075_+	ncRNA_intronic
CAediting_1387223	chr19_53439095_+	ncRNA_intronic
CAediting_1387224	chr19_53439112_+	ncRNA_intronic
CAediting_1387225	chr19_53439115_+	ncRNA_intronic
CAediting_1387226	chr19_53439119_+	ncRNA_intronic
CAediting_1387227	chr19_53439124_+	ncRNA_intronic
CAediting_1387228	chr19_53439140_+	ncRNA_intronic
CAediting_1387229	chr19_53439156_+	ncRNA_intronic
CAediting_1387230	chr19_53439160_+	ncRNA_intronic
CAediting_1387231	chr19_53439164_+	ncRNA_intronic
CAediting_1387232	chr19_53439173_+	ncRNA_intronic
CAediting_1387233	chr19_53439177_+	ncRNA_intronic
CAediting_1387234	chr19_53439191_+	ncRNA_intronic
CAediting_1387235	chr19_53439192_+	ncRNA_intronic
CAediting_1387236	chr19_53439196_+	ncRNA_intronic
CAediting_1387237	chr19_53439203_+	ncRNA_intronic
CAediting_1387238	chr19_53439205_+	ncRNA_intronic
CAediting_1387239	chr19_53439216_+	ncRNA_intronic
CAediting_1387240	chr19_53439221_+	ncRNA_intronic
CAediting_1387241	chr19_53439253_+	ncRNA_intronic
CAediting_1387242	chr19_53439325_+	ncRNA_intronic
CAediting_1387243	chr19_53439345_+	ncRNA_intronic
CAediting_1387244	chr19_53439386_+	ncRNA_intronic
CAediting_1387245	chr19_53439410_+	ncRNA_intronic
CAediting_1387246	chr19_53439423_+	ncRNA_intronic
CAediting_1387247	chr19_53439432_+	ncRNA_intronic
CAediting_1387248	chr19_53439433_+	ncRNA_intronic
CAediting_1387249	chr19_53439435_+	ncRNA_intronic
CAediting_1387250	chr19_53440062_+	ncRNA_intronic
CAediting_1387251	chr19_53440089_+	ncRNA_intronic
CAediting_1387252	chr19_53440102_+	ncRNA_intronic
CAediting_1387253	chr19_53440107_+	ncRNA_intronic
CAediting_1387254	chr19_53440116_+	ncRNA_intronic
CAediting_1387255	chr19_53440177_+	ncRNA_intronic
CAediting_1387256	chr19_53440214_+	ncRNA_intronic
CAediting_1387257	chr19_53440218_+	ncRNA_intronic
CAediting_1387258	chr19_53440231_+	ncRNA_intronic
CAediting_1387259	chr19_53440244_+	ncRNA_intronic
CAediting_1387260	chr19_53440249_+	ncRNA_intronic
CAediting_1387261	chr19_53440254_+	ncRNA_intronic
CAediting_1387262	chr19_53440258_+	ncRNA_intronic
CAediting_1387263	chr19_53440274_+	ncRNA_intronic
CAediting_1387264	chr19_53440308_+	ncRNA_intronic
CAediting_1387265	chr19_53440311_+	ncRNA_intronic
CAediting_1387266	chr19_53440699_+	ncRNA_intronic
CAediting_1387267	chr19_53440701_+	ncRNA_intronic
CAediting_1387268	chr19_53440740_+	ncRNA_intronic
CAediting_1387269	chr19_53440749_+	ncRNA_intronic
CAediting_1387270	chr19_53440750_+	ncRNA_intronic
CAediting_1387271	chr19_53440755_+	ncRNA_intronic
CAediting_1387272	chr19_53440775_+	ncRNA_intronic
CAediting_1387273	chr19_53440776_+	ncRNA_intronic
CAediting_1387274	chr19_53440777_+	ncRNA_intronic
CAediting_1387275	chr19_53440793_+	ncRNA_intronic
CAediting_1387276	chr19_53440805_+	ncRNA_intronic
CAediting_1387277	chr19_53440809_+	ncRNA_intronic
CAediting_1387278	chr19_53440810_+	ncRNA_intronic
CAediting_1387279	chr19_53440831_+	ncRNA_intronic
CAediting_1387280	chr19_53440832_+	ncRNA_intronic
CAediting_1387281	chr19_53440841_+	ncRNA_intronic
CAediting_1387282	chr19_53440860_+	ncRNA_intronic
CAediting_1387283	chr19_53440863_+	ncRNA_intronic
CAediting_1387284	chr19_53440864_+	ncRNA_intronic
CAediting_1387285	chr19_53440873_+	ncRNA_intronic
CAediting_1387286	chr19_53440885_+	ncRNA_intronic
CAediting_1387287	chr19_53440912_+	ncRNA_intronic
CAediting_1387288	chr19_53440937_+	ncRNA_intronic
CAediting_1387289	chr19_53440938_+	ncRNA_intronic
CAediting_1387290	chr19_53440939_+	ncRNA_intronic
CAediting_1387291	chr19_53440941_+	ncRNA_intronic
CAediting_1387292	chr19_53440950_+	ncRNA_intronic
CAediting_1387293	chr19_53440958_+	ncRNA_intronic
CAediting_1387294	chr19_53440968_+	ncRNA_intronic
CAediting_1387295	chr19_53441026_+	ncRNA_intronic
CAediting_1387296	chr19_53441066_+	ncRNA_intronic
CAediting_1387297	chr19_53441067_+	ncRNA_intronic
CAediting_1387298	chr19_53441072_+	ncRNA_intronic
CAediting_1387299	chr19_53441075_+	ncRNA_intronic
CAediting_1387300	chr19_53441080_+	ncRNA_intronic
CAediting_1387301	chr19_53441081_+	ncRNA_intronic
CAediting_1387302	chr19_53441083_+	ncRNA_intronic
CAediting_1387303	chr19_53441096_+	ncRNA_intronic
CAediting_1387304	chr19_53441106_+	ncRNA_intronic
CAediting_1387305	chr19_53441120_+	ncRNA_intronic
CAediting_1387306	chr19_53441121_+	ncRNA_intronic
CAediting_1387307	chr19_53441123_+	ncRNA_intronic
CAediting_1387308	chr19_53441124_+	ncRNA_intronic
CAediting_1387309	chr19_53441126_+	ncRNA_intronic
CAediting_1387310	chr19_53441129_+	ncRNA_intronic
CAediting_1387311	chr19_53441130_+	ncRNA_intronic
CAediting_1387312	chr19_53441131_+	ncRNA_intronic
CAediting_1387313	chr19_53441135_+	ncRNA_intronic
CAediting_1387314	chr19_53441139_+	ncRNA_intronic
CAediting_1387315	chr19_53441161_+	ncRNA_intronic
CAediting_1387316	chr19_53441167_+	ncRNA_intronic
CAediting_1387317	chr19_53441171_+	ncRNA_intronic
CAediting_1387318	chr19_53441194_+	ncRNA_intronic
CAediting_1387319	chr19_53441197_+	ncRNA_intronic
CAediting_1387320	chr19_53441201_+	ncRNA_intronic
CAediting_1387321	chr19_53441202_+	ncRNA_intronic
CAediting_1387322	chr19_53441214_+	ncRNA_intronic
CAediting_1387323	chr19_53441526_+	ncRNA_intronic
CAediting_1387324	chr19_53441546_+	ncRNA_intronic
CAediting_1387325	chr19_53441551_+	ncRNA_intronic
CAediting_1387326	chr19_53441586_+	ncRNA_intronic
CAediting_1387327	chr19_53441588_+	ncRNA_intronic
CAediting_1387328	chr19_53441599_+	ncRNA_intronic
CAediting_1387329	chr19_53441604_+	ncRNA_intronic
CAediting_1387330	chr19_53441608_+	ncRNA_intronic
CAediting_1387331	chr19_53441627_+	ncRNA_intronic
CAediting_1387332	chr19_53441630_+	ncRNA_intronic
CAediting_1387333	chr19_53441669_+	ncRNA_intronic
CAediting_1387334	chr19_53441681_+	ncRNA_intronic
CAediting_1387335	chr19_53444007_+	ncRNA_exonic
CAediting_1387336	chr19_53444071_+	ncRNA_exonic
CAediting_1387337	chr19_53444076_+	ncRNA_exonic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1387196	chr19_53435391_+	SINE	Alu	AluSp
CAediting_1387197	chr19_53435404_+	SINE	Alu	AluSp
CAediting_1387198	chr19_53435405_+	SINE	Alu	AluSp
CAediting_1387199	chr19_53435444_+	SINE	Alu	AluSp
CAediting_1387200	chr19_53437062_+	SINE	Alu	AluSx1
CAediting_1387201	chr19_53437063_+	SINE	Alu	AluSx1
CAediting_1387202	chr19_53437160_+	SINE	Alu	AluSx1
CAediting_1387203	chr19_53437171_+	SINE	Alu	AluSx1
CAediting_1387204	chr19_53437187_+	SINE	Alu	AluSx1
CAediting_1387205	chr19_53437197_+	SINE	Alu	AluSx1
CAediting_1387206	chr19_53437221_+	SINE	Alu	AluSx1
CAediting_1387207	chr19_53437225_+	SINE	Alu	AluSx1
CAediting_1387208	chr19_53437226_+	SINE	Alu	AluSx1
CAediting_1387209	chr19_53437230_+	SINE	Alu	AluSx1
CAediting_1387210	chr19_53437238_+	SINE	Alu	AluSx1
CAediting_1387211	chr19_53437239_+	SINE	Alu	AluSx1
CAediting_1387212	chr19_53437247_+	SINE	Alu	AluSx1
CAediting_1387213	chr19_53437250_+	SINE	Alu	AluSx1
CAediting_1387214	chr19_53437259_+	SINE	Alu	AluSx1
CAediting_1387215	chr19_53437267_+	SINE	Alu	AluSx1
CAediting_1387216	chr19_53437275_+	SINE	Alu	AluSx1
CAediting_1387217	chr19_53437300_+	SINE	Alu	AluSx1
CAediting_1387218	chr19_53437306_+	SINE	Alu	AluSx1
CAediting_1387219	chr19_53439025_+	SINE	Alu	AluSg7
CAediting_1387220	chr19_53439061_+	SINE	Alu	AluSg7
CAediting_1387221	chr19_53439070_+	SINE	Alu	AluSg7
CAediting_1387222	chr19_53439075_+	SINE	Alu	AluSg7
CAediting_1387223	chr19_53439095_+	SINE	Alu	AluSg7
CAediting_1387224	chr19_53439112_+	SINE	Alu	AluSg7
CAediting_1387225	chr19_53439115_+	SINE	Alu	AluSg7
CAediting_1387226	chr19_53439119_+	SINE	Alu	AluSg7
CAediting_1387227	chr19_53439124_+	SINE	Alu	AluSg7
CAediting_1387228	chr19_53439140_+	SINE	Alu	AluSg7
CAediting_1387229	chr19_53439156_+	SINE	Alu	AluSg7
CAediting_1387230	chr19_53439160_+	SINE	Alu	AluSg7
CAediting_1387231	chr19_53439164_+	SINE	Alu	AluSg7
CAediting_1387232	chr19_53439173_+	SINE	Alu	AluSg7
CAediting_1387233	chr19_53439177_+	SINE	Alu	AluSg7
CAediting_1387234	chr19_53439191_+	SINE	Alu	AluSg7
CAediting_1387235	chr19_53439192_+	SINE	Alu	AluSg7
CAediting_1387236	chr19_53439196_+	SINE	Alu	AluSg7
CAediting_1387237	chr19_53439203_+	SINE	Alu	AluSg7
CAediting_1387238	chr19_53439205_+	SINE	Alu	AluSg7
CAediting_1387239	chr19_53439216_+	SINE	Alu	AluSg7
CAediting_1387240	chr19_53439221_+	SINE	Alu	AluSg7
CAediting_1387241	chr19_53439253_+	SINE	Alu	AluSg7
CAediting_1387242	chr19_53439325_+	SINE	Alu	AluYc
CAediting_1387243	chr19_53439345_+	SINE	Alu	AluYc
CAediting_1387244	chr19_53439386_+	SINE	Alu	AluYc
CAediting_1387245	chr19_53439410_+	SINE	Alu	AluYc
CAediting_1387246	chr19_53439423_+	SINE	Alu	AluYc
CAediting_1387247	chr19_53439432_+	SINE	Alu	AluYc
CAediting_1387248	chr19_53439433_+	SINE	Alu	AluYc
CAediting_1387249	chr19_53439435_+	SINE	Alu	AluYc
CAediting_1387250	chr19_53440062_+	SINE	Alu	AluJo
CAediting_1387251	chr19_53440089_+	SINE	Alu	AluJo
CAediting_1387252	chr19_53440102_+	SINE	Alu	AluJo
CAediting_1387253	chr19_53440107_+	SINE	Alu	AluJo
CAediting_1387254	chr19_53440116_+	SINE	Alu	AluJo
CAediting_1387255	chr19_53440177_+	SINE	Alu	AluJo
CAediting_1387256	chr19_53440214_+	SINE	Alu	AluJo
CAediting_1387257	chr19_53440218_+	SINE	Alu	AluJo
CAediting_1387258	chr19_53440231_+	SINE	Alu	AluJo
CAediting_1387259	chr19_53440244_+	SINE	Alu	AluJo
CAediting_1387260	chr19_53440249_+	SINE	Alu	AluJo
CAediting_1387261	chr19_53440254_+	SINE	Alu	AluJo
CAediting_1387262	chr19_53440258_+	SINE	Alu	AluJo
CAediting_1387263	chr19_53440274_+	SINE	Alu	AluJo
CAediting_1387264	chr19_53440308_+	SINE	Alu	AluJo
CAediting_1387265	chr19_53440311_+	SINE	Alu	AluJo
CAediting_1387266	chr19_53440699_+	SINE	Alu	AluJb
CAediting_1387267	chr19_53440701_+	SINE	Alu	AluJb
CAediting_1387268	chr19_53440740_+	SINE	Alu	AluJb
CAediting_1387269	chr19_53440749_+	SINE	Alu	AluJb
CAediting_1387270	chr19_53440750_+	SINE	Alu	AluJb
CAediting_1387271	chr19_53440755_+	SINE	Alu	AluJb
CAediting_1387272	chr19_53440775_+	SINE	Alu	AluJb
CAediting_1387273	chr19_53440776_+	SINE	Alu	AluJb
CAediting_1387274	chr19_53440777_+	SINE	Alu	AluJb
CAediting_1387275	chr19_53440793_+	SINE	Alu	AluJb
CAediting_1387276	chr19_53440805_+	SINE	Alu	AluJb
CAediting_1387277	chr19_53440809_+	SINE	Alu	AluJb
CAediting_1387278	chr19_53440810_+	SINE	Alu	AluJb
CAediting_1387279	chr19_53440831_+	SINE	Alu	AluJb
CAediting_1387280	chr19_53440832_+	SINE	Alu	AluJb
CAediting_1387281	chr19_53440841_+	SINE	Alu	AluJb
CAediting_1387282	chr19_53440860_+	SINE	Alu	AluJb
CAediting_1387283	chr19_53440863_+	SINE	Alu	AluJb
CAediting_1387284	chr19_53440864_+	SINE	Alu	AluJb
CAediting_1387285	chr19_53440873_+	SINE	Alu	AluJb
CAediting_1387286	chr19_53440885_+	SINE	Alu	AluJb
CAediting_1387287	chr19_53440912_+	SINE	Alu	AluJb
CAediting_1387288	chr19_53440937_+	SINE	Alu	AluJb
CAediting_1387289	chr19_53440938_+	SINE	Alu	AluJb
CAediting_1387290	chr19_53440939_+	SINE	Alu	AluJb
CAediting_1387291	chr19_53440941_+	SINE	Alu	AluJb
CAediting_1387292	chr19_53440950_+	SINE	Alu	AluJb
CAediting_1387293	chr19_53440958_+	SINE	Alu	AluJb
CAediting_1387294	chr19_53440968_+	SINE	Alu	AluJb
CAediting_1387295	chr19_53441026_+	SINE	Alu	AluSx
CAediting_1387296	chr19_53441066_+	SINE	Alu	AluSx
CAediting_1387297	chr19_53441067_+	SINE	Alu	AluSx
CAediting_1387298	chr19_53441072_+	SINE	Alu	AluSx
CAediting_1387299	chr19_53441075_+	SINE	Alu	AluSx
CAediting_1387300	chr19_53441080_+	SINE	Alu	AluSx
CAediting_1387301	chr19_53441081_+	SINE	Alu	AluSx
CAediting_1387302	chr19_53441083_+	SINE	Alu	AluSx
CAediting_1387303	chr19_53441096_+	SINE	Alu	AluSx
CAediting_1387304	chr19_53441106_+	SINE	Alu	AluSx
CAediting_1387305	chr19_53441120_+	SINE	Alu	AluSx
CAediting_1387306	chr19_53441121_+	SINE	Alu	AluSx
CAediting_1387307	chr19_53441123_+	SINE	Alu	AluSx
CAediting_1387308	chr19_53441124_+	SINE	Alu	AluSx
CAediting_1387309	chr19_53441126_+	SINE	Alu	AluSx
CAediting_1387310	chr19_53441129_+	SINE	Alu	AluSx
CAediting_1387311	chr19_53441130_+	SINE	Alu	AluSx
CAediting_1387312	chr19_53441131_+	SINE	Alu	AluSx
CAediting_1387313	chr19_53441135_+	SINE	Alu	AluSx
CAediting_1387314	chr19_53441139_+	SINE	Alu	AluSx
CAediting_1387315	chr19_53441161_+	SINE	Alu	AluSx
CAediting_1387316	chr19_53441167_+	SINE	Alu	AluSx
CAediting_1387317	chr19_53441171_+	SINE	Alu	AluSx
CAediting_1387318	chr19_53441194_+	SINE	Alu	AluSx
CAediting_1387319	chr19_53441197_+	SINE	Alu	AluSx
CAediting_1387320	chr19_53441201_+	SINE	Alu	AluSx
CAediting_1387321	chr19_53441202_+	SINE	Alu	AluSx
CAediting_1387322	chr19_53441214_+	SINE	Alu	AluSx
CAediting_1387323	chr19_53441526_+	SINE	Alu	AluSx
CAediting_1387324	chr19_53441546_+	SINE	Alu	AluSx
CAediting_1387325	chr19_53441551_+	SINE	Alu	AluSx
CAediting_1387326	chr19_53441586_+	SINE	Alu	AluSx
CAediting_1387327	chr19_53441588_+	SINE	Alu	AluSx
CAediting_1387328	chr19_53441599_+	SINE	Alu	AluSx
CAediting_1387329	chr19_53441604_+	SINE	Alu	AluSx
CAediting_1387330	chr19_53441608_+	SINE	Alu	AluSx
CAediting_1387331	chr19_53441627_+	SINE	Alu	AluSx
CAediting_1387332	chr19_53441630_+	SINE	Alu	AluSx
CAediting_1387333	chr19_53441669_+	SINE	Alu	AluSx
CAediting_1387334	chr19_53441681_+	SINE	Alu	AluSx
CAediting_1387335	chr19_53444007_+	LTR	ERVK	LTR5B
CAediting_1387336	chr19_53444071_+	LTR	ERVK	LTR5B
CAediting_1387337	chr19_53444076_+	LTR	ERVK	LTR5B

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RNA A-to-I editing events in the alternative splicing sites for TPM3P9

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000241015.2.TPM3P9.

Correlation between RNA A-to-I editing and PSI for ENSG00000241015.2.TPM3P9.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for TPM3P9

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for TPM3P9

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for TPM3P9

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for TPM3P9

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for TPM3P9

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
PRAD	CAediting_1387231	chr19_53439164_+	0.00802623958919864	0.341970176873288	.	.	.	.
PRAD	CAediting_1387244	chr19_53439386_+	.	.	2.23453713278926e-09	0.547124918647366	.	.
PRAD	CAediting_1387269	chr19_53440749_+	0.0426063196748378	0.184651114695943	.	.	.	.
PRAD	CAediting_1387276	chr19_53440805_+	0.0458765327338747	0.270384732726176	.	.	.	.
PRAD	CAediting_1387277	chr19_53440809_+	.	.	0.00689018433769478	0.363542274897226	.	.

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Relation with cancer stages for TPM3P9

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for TPM3P9

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for TPM3P9

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for TPM3P9

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene