Home

Download

Statistics

Examples

Help

Contact

Editing gene: TMC4 (CAeditome ID:147798)

Gene summary for TMC4

Gene summary

Gene information	Gene symbol	TMC4
	Gene ID	147798
	Gene name	transmembrane channel like 4
	Synonyms	-
	Cytomap	19q13.42
	Type of gene	protein-coding
	Description	transmembrane channel-like protein 4testicular tissue protein Li 204
	Modification date	20210518
	UniProtAcc	.
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

Top

RNA A-to-I events for TMC4

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000167608.10

RNA A-to-I editing events in Cancer.

CAediting_1388688(54161445, -), CAediting_1388689(54161446, -), CAediting_1388690(54161452, -), CAediting_1388691(54161460, -), CAediting_1388692(54161464, -), CAediting_1388693(54161487, -), CAediting_1388694(54161495, -), CAediting_1388695(54161513, -), CAediting_1388696(54161529, -), CAediting_1388697(54161586, -), CAediting_1388698(54161606, -), CAediting_1388699(54161607, -), CAediting_1388700(54161622, -), CAediting_1388701(54161645, -), CAediting_1388702(54161663, -), CAediting_1388703(54161676, -), CAediting_1388704(54161693, -), CAediting_1388705(54161703, -), CAediting_1388706(54161738, -), CAediting_1388707(54161743, -), CAediting_1388708(54161796, -), CAediting_1388709(54163376, -), CAediting_1388710(54163378, -), CAediting_1388711(54163408, -), CAediting_1388712(54163416, -), CAediting_1388713(54163417, -), CAediting_1388714(54163422, -), CAediting_1388715(54163439, -), CAediting_1388716(54163449, -), CAediting_1388717(54163461, -), CAediting_1388718(54163478, -), CAediting_1388719(54163481, -), CAediting_1388720(54163485, -), CAediting_1388721(54163502, -), CAediting_1388722(54163506, -), CAediting_1388723(54163515, -), CAediting_1388724(54163552, -), CAediting_1388725(54163568, -), CAediting_1388726(54163569, -), CAediting_1388727(54163575, -), CAediting_1388728(54163577, -), CAediting_1388729(54163585, -), CAediting_1388730(54163591, -), CAediting_1388731(54164051, -), CAediting_1388732(54164077, -), CAediting_1388733(54164099, -), CAediting_1388734(54164103, -), CAediting_1388735(54164112, -), CAediting_1388736(54164139, -), CAediting_1388737(54164148, -), CAediting_1388738(54164150, -), CAediting_1388739(54164153, -), CAediting_1388740(54164154, -), CAediting_1388741(54164202, -), CAediting_1388742(54164245, -), CAediting_1388743(54164246, -), CAediting_1388744(54164252, -), CAediting_1388745(54165107, -), CAediting_1388746(54165154, -), CAediting_1388747(54165172, -), CAediting_1388748(54165175, -), CAediting_1388749(54165181, -), CAediting_1388750(54165189, -), CAediting_1388751(54166134, -), CAediting_1388752(54166167, -), CAediting_1388753(54166216, -), CAediting_1388754(54166230, -), CAediting_1388755(54166247, -), CAediting_1388756(54166257, -), CAediting_1388757(54166267, -), CAediting_1388758(54166270, -), CAediting_1388759(54166271, -), CAediting_1388760(54166279, -), CAediting_1388761(54166296, -), CAediting_1388762(54166681, -), CAediting_1388763(54166697, -), CAediting_1388764(54166709, -), CAediting_1388765(54166710, -), CAediting_1388766(54166737, -), CAediting_1388767(54166762, -), CAediting_1388768(54166785, -), CAediting_1388769(54166788, -), CAediting_1388770(54166791, -), CAediting_1388771(54166825, -), CAediting_1388772(54166831, -), CAediting_1388773(54166841, -), CAediting_1388774(54166845, -), CAediting_1388775(54166853, -), CAediting_1388776(54166871, -), CAediting_1388777(54166896, -), CAediting_1388778(54166901, -), CAediting_1388779(54166915, -), CAediting_1388780(54166920, -), CAediting_1388781(54166922, -), CAediting_1388782(54166931, -), CAediting_1388783(54167002, -), CAediting_1388784(54167006, -), CAediting_1388785(54167015, -), CAediting_1388786(54167024, -), CAediting_1388787(54167039, -), CAediting_1388788(54167041, -), CAediting_1388789(54167042, -), CAediting_1388790(54167048, -), CAediting_1388791(54167054, -), CAediting_1388792(54167056, -), CAediting_1388793(54167087, -), CAediting_1388794(54167141, -), CAediting_1388795(54167151, -), CAediting_1388796(54167154, -), CAediting_1388797(54167163, -), CAediting_1388798(54167168, -), CAediting_1388799(54167201, -), CAediting_1388800(54167233, -), CAediting_1388801(54167241, -), CAediting_1388802(54167249, -), CAediting_1388803(54167257, -), CAediting_1388804(54167301, -), CAediting_1388805(54167313, -), CAediting_1388806(54167341, -), CAediting_1388807(54167353, -), CAediting_1388808(54167388, -), CAediting_1388809(54167392, -), CAediting_1388810(54167395, -), CAediting_1388811(54167410, -), CAediting_1388812(54167411, -), CAediting_1388813(54167437, -), CAediting_1388814(54167447, -), CAediting_1388815(54167476, -), CAediting_1388816(54167477, -), CAediting_1388817(54167502, -), CAediting_1388818(54167515, -), CAediting_1388819(54167553, -), CAediting_1388820(54167557, -), CAediting_1388821(54167631, -), CAediting_1388822(54167637, -), CAediting_1388823(54167646, -), CAediting_1388824(54167656, -), CAediting_1388825(54167666, -), CAediting_1388826(54167681, -), CAediting_1388827(54167692, -), CAediting_1388828(54167701, -), CAediting_1388829(54167715, -), CAediting_1388830(54167727, -), CAediting_1388831(54167728, -), CAediting_1388832(54167731, -), CAediting_1388833(54167732, -), CAediting_1388834(54167797, -), CAediting_1388835(54167806, -), CAediting_1388836(54167818, -), CAediting_1388837(54167849, -), CAediting_1388838(54167881, -), CAediting_1388839(54167895, -), CAediting_1388840(54167898, -), CAediting_1388841(54167941, -), CAediting_1388842(54167954, -), CAediting_1388843(54167955, -), CAediting_1388844(54167980, -), CAediting_1388845(54167981, -), CAediting_1388846(54168000, -), CAediting_1388847(54168006, -), CAediting_1388848(54168016, -), CAediting_1388849(54168017, -), CAediting_1388850(54168078, -), CAediting_1388851(54169091, -), CAediting_1388852(54169101, -), CAediting_1388853(54169110, -), CAediting_1388854(54169123, -), CAediting_1388855(54169130, -), CAediting_1388856(54169131, -), CAediting_1388857(54169139, -), CAediting_1388858(54169142, -), CAediting_1388859(54169145, -), CAediting_1388860(54169147, -), CAediting_1388861(54169162, -), CAediting_1388862(54169166, -), CAediting_1388863(54169172, -), CAediting_1388864(54169198, -), CAediting_1388865(54169202, -), CAediting_1388866(54169203, -), CAediting_1388867(54169204, -), CAediting_1388868(54169207, -), CAediting_1388869(54169209, -), CAediting_1388870(54169210, -), CAediting_1388871(54169211, -), CAediting_1388872(54169212, -), CAediting_1388873(54169213, -), CAediting_1388874(54169228, -), CAediting_1388875(54169229, -), CAediting_1388876(54169230, -), CAediting_1388877(54169236, -), CAediting_1388878(54169238, -), CAediting_1388879(54169251, -), CAediting_1388880(54169258, -), CAediting_1388881(54169259, -), CAediting_1388882(54169261, -), CAediting_1388883(54169262, -), CAediting_1388884(54169267, -), CAediting_1388885(54169272, -), CAediting_1388886(54169275, -), CAediting_1388887(54169299, -), CAediting_1388888(54169307, -), CAediting_1388889(54169308, -), CAediting_1388890(54169316, -), CAediting_1388891(54170067, -), CAediting_1388892(54170092, -), CAediting_1388893(54171194, -), CAediting_1388894(54171223, -), CAediting_1388895(54171246, -), CAediting_1388896(54171247, -),

Top

RNA editing positional annotations for TMC4 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1388688	chr19_54161445_-	ncRNA_intronic
CAediting_1388689	chr19_54161446_-	ncRNA_intronic
CAediting_1388690	chr19_54161452_-	ncRNA_intronic
CAediting_1388691	chr19_54161460_-	ncRNA_intronic
CAediting_1388692	chr19_54161464_-	ncRNA_intronic
CAediting_1388693	chr19_54161487_-	ncRNA_intronic
CAediting_1388694	chr19_54161495_-	ncRNA_intronic
CAediting_1388695	chr19_54161513_-	ncRNA_intronic
CAediting_1388696	chr19_54161529_-	ncRNA_intronic
CAediting_1388697	chr19_54161586_-	ncRNA_intronic
CAediting_1388698	chr19_54161606_-	ncRNA_intronic
CAediting_1388699	chr19_54161607_-	ncRNA_intronic
CAediting_1388700	chr19_54161622_-	ncRNA_intronic
CAediting_1388701	chr19_54161645_-	ncRNA_intronic
CAediting_1388702	chr19_54161663_-	ncRNA_intronic
CAediting_1388703	chr19_54161676_-	ncRNA_intronic
CAediting_1388704	chr19_54161693_-	ncRNA_intronic
CAediting_1388705	chr19_54161703_-	ncRNA_intronic
CAediting_1388706	chr19_54161738_-	ncRNA_intronic
CAediting_1388707	chr19_54161743_-	ncRNA_intronic
CAediting_1388708	chr19_54161796_-	ncRNA_intronic
CAediting_1388709	chr19_54163376_-	ncRNA_intronic
CAediting_1388710	chr19_54163378_-	ncRNA_intronic
CAediting_1388711	chr19_54163408_-	ncRNA_intronic
CAediting_1388712	chr19_54163416_-	ncRNA_intronic
CAediting_1388713	chr19_54163417_-	ncRNA_intronic
CAediting_1388714	chr19_54163422_-	ncRNA_intronic
CAediting_1388715	chr19_54163439_-	ncRNA_intronic
CAediting_1388716	chr19_54163449_-	ncRNA_intronic
CAediting_1388717	chr19_54163461_-	ncRNA_intronic
CAediting_1388718	chr19_54163478_-	ncRNA_intronic
CAediting_1388719	chr19_54163481_-	ncRNA_intronic
CAediting_1388720	chr19_54163485_-	ncRNA_intronic
CAediting_1388721	chr19_54163502_-	ncRNA_intronic
CAediting_1388722	chr19_54163506_-	ncRNA_intronic
CAediting_1388723	chr19_54163515_-	ncRNA_intronic
CAediting_1388724	chr19_54163552_-	ncRNA_intronic
CAediting_1388725	chr19_54163568_-	ncRNA_intronic
CAediting_1388726	chr19_54163569_-	ncRNA_intronic
CAediting_1388727	chr19_54163575_-	ncRNA_intronic
CAediting_1388728	chr19_54163577_-	ncRNA_intronic
CAediting_1388729	chr19_54163585_-	ncRNA_intronic
CAediting_1388730	chr19_54163591_-	ncRNA_intronic
CAediting_1388731	chr19_54164051_-	ncRNA_intronic
CAediting_1388732	chr19_54164077_-	ncRNA_intronic
CAediting_1388733	chr19_54164099_-	ncRNA_intronic
CAediting_1388734	chr19_54164103_-	ncRNA_intronic
CAediting_1388735	chr19_54164112_-	ncRNA_intronic
CAediting_1388736	chr19_54164139_-	ncRNA_intronic
CAediting_1388737	chr19_54164148_-	ncRNA_intronic
CAediting_1388738	chr19_54164150_-	ncRNA_intronic
CAediting_1388739	chr19_54164153_-	ncRNA_intronic
CAediting_1388740	chr19_54164154_-	ncRNA_intronic
CAediting_1388741	chr19_54164202_-	ncRNA_intronic
CAediting_1388742	chr19_54164245_-	ncRNA_intronic
CAediting_1388743	chr19_54164246_-	ncRNA_intronic
CAediting_1388744	chr19_54164252_-	ncRNA_intronic
CAediting_1388745	chr19_54165107_-	ncRNA_intronic
CAediting_1388746	chr19_54165154_-	ncRNA_intronic
CAediting_1388747	chr19_54165172_-	ncRNA_intronic
CAediting_1388748	chr19_54165175_-	ncRNA_intronic
CAediting_1388749	chr19_54165181_-	ncRNA_intronic
CAediting_1388750	chr19_54165189_-	ncRNA_intronic
CAediting_1388751	chr19_54166134_-	ncRNA_intronic
CAediting_1388752	chr19_54166167_-	ncRNA_intronic
CAediting_1388753	chr19_54166216_-	ncRNA_intronic
CAediting_1388754	chr19_54166230_-	ncRNA_intronic
CAediting_1388755	chr19_54166247_-	ncRNA_intronic
CAediting_1388756	chr19_54166257_-	ncRNA_intronic
CAediting_1388757	chr19_54166267_-	ncRNA_intronic
CAediting_1388758	chr19_54166270_-	ncRNA_intronic
CAediting_1388759	chr19_54166271_-	ncRNA_intronic
CAediting_1388760	chr19_54166279_-	ncRNA_intronic
CAediting_1388761	chr19_54166296_-	ncRNA_intronic
CAediting_1388762	chr19_54166681_-	ncRNA_intronic
CAediting_1388763	chr19_54166697_-	ncRNA_intronic
CAediting_1388764	chr19_54166709_-	ncRNA_intronic
CAediting_1388765	chr19_54166710_-	ncRNA_intronic
CAediting_1388766	chr19_54166737_-	ncRNA_intronic
CAediting_1388767	chr19_54166762_-	ncRNA_intronic
CAediting_1388768	chr19_54166785_-	ncRNA_intronic
CAediting_1388769	chr19_54166788_-	ncRNA_intronic
CAediting_1388770	chr19_54166791_-	ncRNA_intronic
CAediting_1388771	chr19_54166825_-	ncRNA_intronic
CAediting_1388772	chr19_54166831_-	ncRNA_intronic
CAediting_1388773	chr19_54166841_-	ncRNA_intronic
CAediting_1388774	chr19_54166845_-	ncRNA_intronic
CAediting_1388775	chr19_54166853_-	ncRNA_intronic
CAediting_1388776	chr19_54166871_-	ncRNA_intronic
CAediting_1388777	chr19_54166896_-	ncRNA_intronic
CAediting_1388778	chr19_54166901_-	ncRNA_intronic
CAediting_1388779	chr19_54166915_-	ncRNA_intronic
CAediting_1388780	chr19_54166920_-	ncRNA_intronic
CAediting_1388781	chr19_54166922_-	ncRNA_intronic
CAediting_1388782	chr19_54166931_-	ncRNA_intronic
CAediting_1388783	chr19_54167002_-	ncRNA_intronic
CAediting_1388784	chr19_54167006_-	ncRNA_intronic
CAediting_1388785	chr19_54167015_-	ncRNA_intronic
CAediting_1388786	chr19_54167024_-	ncRNA_intronic
CAediting_1388787	chr19_54167039_-	ncRNA_intronic
CAediting_1388788	chr19_54167041_-	ncRNA_intronic
CAediting_1388789	chr19_54167042_-	ncRNA_intronic
CAediting_1388790	chr19_54167048_-	ncRNA_intronic
CAediting_1388791	chr19_54167054_-	ncRNA_intronic
CAediting_1388792	chr19_54167056_-	ncRNA_intronic
CAediting_1388793	chr19_54167087_-	ncRNA_intronic
CAediting_1388794	chr19_54167141_-	ncRNA_intronic
CAediting_1388795	chr19_54167151_-	ncRNA_intronic
CAediting_1388796	chr19_54167154_-	ncRNA_intronic
CAediting_1388797	chr19_54167163_-	ncRNA_intronic
CAediting_1388798	chr19_54167168_-	ncRNA_intronic
CAediting_1388799	chr19_54167201_-	ncRNA_intronic
CAediting_1388800	chr19_54167233_-	ncRNA_intronic
CAediting_1388801	chr19_54167241_-	ncRNA_intronic
CAediting_1388802	chr19_54167249_-	ncRNA_intronic
CAediting_1388803	chr19_54167257_-	ncRNA_intronic
CAediting_1388804	chr19_54167301_-	ncRNA_intronic
CAediting_1388805	chr19_54167313_-	ncRNA_intronic
CAediting_1388806	chr19_54167341_-	ncRNA_intronic
CAediting_1388807	chr19_54167353_-	ncRNA_intronic
CAediting_1388808	chr19_54167388_-	ncRNA_intronic
CAediting_1388809	chr19_54167392_-	ncRNA_intronic
CAediting_1388810	chr19_54167395_-	ncRNA_intronic
CAediting_1388811	chr19_54167410_-	ncRNA_intronic
CAediting_1388812	chr19_54167411_-	ncRNA_intronic
CAediting_1388813	chr19_54167437_-	ncRNA_intronic
CAediting_1388814	chr19_54167447_-	ncRNA_intronic
CAediting_1388815	chr19_54167476_-	ncRNA_intronic
CAediting_1388816	chr19_54167477_-	ncRNA_intronic
CAediting_1388817	chr19_54167502_-	ncRNA_intronic
CAediting_1388818	chr19_54167515_-	ncRNA_intronic
CAediting_1388819	chr19_54167553_-	ncRNA_intronic
CAediting_1388820	chr19_54167557_-	ncRNA_intronic
CAediting_1388821	chr19_54167631_-	ncRNA_intronic
CAediting_1388822	chr19_54167637_-	ncRNA_intronic
CAediting_1388823	chr19_54167646_-	ncRNA_intronic
CAediting_1388824	chr19_54167656_-	ncRNA_intronic
CAediting_1388825	chr19_54167666_-	ncRNA_intronic
CAediting_1388826	chr19_54167681_-	ncRNA_intronic
CAediting_1388827	chr19_54167692_-	ncRNA_intronic
CAediting_1388828	chr19_54167701_-	ncRNA_intronic
CAediting_1388829	chr19_54167715_-	ncRNA_intronic
CAediting_1388830	chr19_54167727_-	ncRNA_intronic
CAediting_1388831	chr19_54167728_-	ncRNA_intronic
CAediting_1388832	chr19_54167731_-	ncRNA_intronic
CAediting_1388833	chr19_54167732_-	ncRNA_intronic
CAediting_1388834	chr19_54167797_-	ncRNA_intronic
CAediting_1388835	chr19_54167806_-	ncRNA_intronic
CAediting_1388836	chr19_54167818_-	ncRNA_intronic
CAediting_1388837	chr19_54167849_-	ncRNA_intronic
CAediting_1388838	chr19_54167881_-	ncRNA_intronic
CAediting_1388839	chr19_54167895_-	ncRNA_intronic
CAediting_1388840	chr19_54167898_-	ncRNA_intronic
CAediting_1388841	chr19_54167941_-	ncRNA_intronic
CAediting_1388842	chr19_54167954_-	ncRNA_intronic
CAediting_1388843	chr19_54167955_-	ncRNA_intronic
CAediting_1388844	chr19_54167980_-	ncRNA_intronic
CAediting_1388845	chr19_54167981_-	ncRNA_intronic
CAediting_1388846	chr19_54168000_-	ncRNA_intronic
CAediting_1388847	chr19_54168006_-	ncRNA_intronic
CAediting_1388848	chr19_54168016_-	ncRNA_intronic
CAediting_1388849	chr19_54168017_-	ncRNA_intronic
CAediting_1388850	chr19_54168078_-	ncRNA_intronic
CAediting_1388851	chr19_54169091_-	ncRNA_intronic
CAediting_1388852	chr19_54169101_-	ncRNA_intronic
CAediting_1388853	chr19_54169110_-	ncRNA_intronic
CAediting_1388854	chr19_54169123_-	ncRNA_intronic
CAediting_1388855	chr19_54169130_-	ncRNA_intronic
CAediting_1388856	chr19_54169131_-	ncRNA_intronic
CAediting_1388857	chr19_54169139_-	ncRNA_intronic
CAediting_1388858	chr19_54169142_-	ncRNA_intronic
CAediting_1388859	chr19_54169145_-	ncRNA_intronic
CAediting_1388860	chr19_54169147_-	ncRNA_intronic
CAediting_1388861	chr19_54169162_-	ncRNA_intronic
CAediting_1388862	chr19_54169166_-	ncRNA_intronic
CAediting_1388863	chr19_54169172_-	ncRNA_intronic
CAediting_1388864	chr19_54169198_-	ncRNA_intronic
CAediting_1388865	chr19_54169202_-	ncRNA_intronic
CAediting_1388866	chr19_54169203_-	ncRNA_intronic
CAediting_1388867	chr19_54169204_-	ncRNA_intronic
CAediting_1388868	chr19_54169207_-	ncRNA_intronic
CAediting_1388869	chr19_54169209_-	ncRNA_intronic
CAediting_1388870	chr19_54169210_-	ncRNA_intronic
CAediting_1388871	chr19_54169211_-	ncRNA_intronic
CAediting_1388872	chr19_54169212_-	ncRNA_intronic
CAediting_1388873	chr19_54169213_-	ncRNA_intronic
CAediting_1388874	chr19_54169228_-	ncRNA_intronic
CAediting_1388875	chr19_54169229_-	ncRNA_intronic
CAediting_1388876	chr19_54169230_-	ncRNA_intronic
CAediting_1388877	chr19_54169236_-	ncRNA_intronic
CAediting_1388878	chr19_54169238_-	ncRNA_intronic
CAediting_1388879	chr19_54169251_-	ncRNA_intronic
CAediting_1388880	chr19_54169258_-	ncRNA_intronic
CAediting_1388881	chr19_54169259_-	ncRNA_intronic
CAediting_1388882	chr19_54169261_-	ncRNA_intronic
CAediting_1388883	chr19_54169262_-	ncRNA_intronic
CAediting_1388884	chr19_54169267_-	ncRNA_intronic
CAediting_1388885	chr19_54169272_-	ncRNA_intronic
CAediting_1388886	chr19_54169275_-	ncRNA_intronic
CAediting_1388887	chr19_54169299_-	ncRNA_intronic
CAediting_1388888	chr19_54169307_-	ncRNA_intronic
CAediting_1388889	chr19_54169308_-	ncRNA_intronic
CAediting_1388890	chr19_54169316_-	ncRNA_intronic
CAediting_1388891	chr19_54170067_-	ncRNA_intronic
CAediting_1388892	chr19_54170092_-	ncRNA_intronic
CAediting_1388893	chr19_54171194_-	ncRNA_intronic
CAediting_1388894	chr19_54171223_-	ncRNA_intronic
CAediting_1388895	chr19_54171246_-	ncRNA_intronic
CAediting_1388896	chr19_54171247_-	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1388688	chr19_54161445_-	SINE	Alu	AluSz6
CAediting_1388689	chr19_54161446_-	SINE	Alu	AluSz6
CAediting_1388690	chr19_54161452_-	SINE	Alu	AluSz6
CAediting_1388691	chr19_54161460_-	SINE	Alu	AluSz6
CAediting_1388692	chr19_54161464_-	SINE	Alu	AluSz6
CAediting_1388693	chr19_54161487_-	SINE	Alu	AluSz6
CAediting_1388694	chr19_54161495_-	SINE	Alu	AluSz6
CAediting_1388695	chr19_54161513_-	SINE	Alu	AluSz6
CAediting_1388696	chr19_54161529_-	SINE	Alu	AluSx1
CAediting_1388697	chr19_54161586_-	SINE	Alu	AluSx1
CAediting_1388698	chr19_54161606_-	SINE	Alu	AluSx1
CAediting_1388699	chr19_54161607_-	SINE	Alu	AluSx1
CAediting_1388700	chr19_54161622_-	SINE	Alu	AluSx1
CAediting_1388701	chr19_54161645_-	SINE	Alu	AluSx1
CAediting_1388702	chr19_54161663_-	SINE	Alu	AluSx1
CAediting_1388703	chr19_54161676_-	SINE	Alu	AluSx1
CAediting_1388704	chr19_54161693_-	SINE	Alu	AluSx1
CAediting_1388705	chr19_54161703_-	SINE	Alu	AluSx1
CAediting_1388706	chr19_54161738_-	SINE	Alu	AluSx1
CAediting_1388707	chr19_54161743_-	SINE	Alu	AluSx1
CAediting_1388708	chr19_54161796_-	SINE	Alu	AluSx1
CAediting_1388709	chr19_54163376_-	SINE	Alu	AluSx
CAediting_1388710	chr19_54163378_-	SINE	Alu	AluSx
CAediting_1388711	chr19_54163408_-	SINE	Alu	AluSx
CAediting_1388712	chr19_54163416_-	SINE	Alu	AluSx
CAediting_1388713	chr19_54163417_-	SINE	Alu	AluSx
CAediting_1388714	chr19_54163422_-	SINE	Alu	AluSx
CAediting_1388715	chr19_54163439_-	SINE	Alu	AluSx
CAediting_1388716	chr19_54163449_-	SINE	Alu	AluSx
CAediting_1388717	chr19_54163461_-	SINE	Alu	AluSx
CAediting_1388718	chr19_54163478_-	SINE	Alu	AluSx
CAediting_1388719	chr19_54163481_-	SINE	Alu	AluSx
CAediting_1388720	chr19_54163485_-	SINE	Alu	AluSx
CAediting_1388721	chr19_54163502_-	SINE	Alu	AluSx
CAediting_1388722	chr19_54163506_-	SINE	Alu	AluSx
CAediting_1388723	chr19_54163515_-	SINE	Alu	AluSx
CAediting_1388724	chr19_54163552_-	SINE	Alu	AluSx
CAediting_1388725	chr19_54163568_-	SINE	Alu	AluSx
CAediting_1388726	chr19_54163569_-	SINE	Alu	AluSx
CAediting_1388727	chr19_54163575_-	SINE	Alu	AluSx
CAediting_1388728	chr19_54163577_-	SINE	Alu	AluSx
CAediting_1388729	chr19_54163585_-	SINE	Alu	AluSx
CAediting_1388730	chr19_54163591_-	SINE	Alu	AluSx
CAediting_1388731	chr19_54164051_-	SINE	Alu	AluSg
CAediting_1388732	chr19_54164077_-	SINE	Alu	AluSg
CAediting_1388733	chr19_54164099_-	SINE	Alu	AluSg
CAediting_1388734	chr19_54164103_-	SINE	Alu	AluSg
CAediting_1388735	chr19_54164112_-	SINE	Alu	AluSg
CAediting_1388736	chr19_54164139_-	SINE	Alu	AluSg
CAediting_1388737	chr19_54164148_-	SINE	Alu	AluSg
CAediting_1388738	chr19_54164150_-	SINE	Alu	AluSg
CAediting_1388739	chr19_54164153_-	SINE	Alu	AluSg
CAediting_1388740	chr19_54164154_-	SINE	Alu	AluSg
CAediting_1388741	chr19_54164202_-	SINE	Alu	AluSg
CAediting_1388742	chr19_54164245_-	SINE	Alu	AluSg
CAediting_1388743	chr19_54164246_-	SINE	Alu	AluSg
CAediting_1388744	chr19_54164252_-	SINE	Alu	AluSg
CAediting_1388745	chr19_54165107_-	SINE	Alu	FLAM_C
CAediting_1388746	chr19_54165154_-	SINE	Alu	FLAM_C
CAediting_1388747	chr19_54165172_-	SINE	Alu	FLAM_C
CAediting_1388748	chr19_54165175_-	SINE	Alu	FLAM_C
CAediting_1388749	chr19_54165181_-	SINE	Alu	FLAM_C
CAediting_1388750	chr19_54165189_-	SINE	Alu	FLAM_C
CAediting_1388751	chr19_54166134_-	SINE	Alu	AluSx
CAediting_1388752	chr19_54166167_-	SINE	Alu	AluSx
CAediting_1388753	chr19_54166216_-	SINE	Alu	AluSx
CAediting_1388754	chr19_54166230_-	SINE	Alu	AluSx
CAediting_1388755	chr19_54166247_-	SINE	Alu	AluSx
CAediting_1388756	chr19_54166257_-	SINE	Alu	AluSx
CAediting_1388757	chr19_54166267_-	SINE	Alu	AluSx
CAediting_1388758	chr19_54166270_-	SINE	Alu	AluSx
CAediting_1388759	chr19_54166271_-	SINE	Alu	AluSx
CAediting_1388760	chr19_54166279_-	SINE	Alu	AluSx
CAediting_1388761	chr19_54166296_-	SINE	Alu	AluSx
CAediting_1388762	chr19_54166681_-	SINE	Alu	AluSx
CAediting_1388763	chr19_54166697_-	SINE	Alu	AluSx
CAediting_1388764	chr19_54166709_-	SINE	Alu	AluSx
CAediting_1388765	chr19_54166710_-	SINE	Alu	AluSx
CAediting_1388766	chr19_54166737_-	SINE	Alu	AluSx
CAediting_1388767	chr19_54166762_-	SINE	Alu	AluSx
CAediting_1388768	chr19_54166785_-	SINE	Alu	AluSx
CAediting_1388769	chr19_54166788_-	SINE	Alu	AluSx
CAediting_1388770	chr19_54166791_-	SINE	Alu	AluSx
CAediting_1388771	chr19_54166825_-	SINE	Alu	AluSx
CAediting_1388772	chr19_54166831_-	SINE	Alu	AluSx
CAediting_1388773	chr19_54166841_-	SINE	Alu	AluSx
CAediting_1388774	chr19_54166845_-	SINE	Alu	AluSx
CAediting_1388775	chr19_54166853_-	SINE	Alu	AluSx
CAediting_1388776	chr19_54166871_-	SINE	Alu	AluSx
CAediting_1388777	chr19_54166896_-	SINE	Alu	AluSx
CAediting_1388778	chr19_54166901_-	SINE	Alu	AluSx
CAediting_1388779	chr19_54166915_-	SINE	Alu	AluSx
CAediting_1388780	chr19_54166920_-	SINE	Alu	AluSx
CAediting_1388781	chr19_54166922_-	SINE	Alu	AluSx
CAediting_1388782	chr19_54166931_-	SINE	Alu	AluSx
CAediting_1388783	chr19_54167002_-	SINE	Alu	AluJo
CAediting_1388784	chr19_54167006_-	SINE	Alu	AluJo
CAediting_1388785	chr19_54167015_-	SINE	Alu	AluJo
CAediting_1388786	chr19_54167024_-	SINE	Alu	AluJo
CAediting_1388787	chr19_54167039_-	SINE	Alu	AluJo
CAediting_1388788	chr19_54167041_-	SINE	Alu	AluJo
CAediting_1388789	chr19_54167042_-	SINE	Alu	AluJo
CAediting_1388790	chr19_54167048_-	SINE	Alu	AluJo
CAediting_1388791	chr19_54167054_-	SINE	Alu	AluJo
CAediting_1388792	chr19_54167056_-	SINE	Alu	AluJo
CAediting_1388793	chr19_54167087_-	SINE	Alu	AluJo
CAediting_1388794	chr19_54167141_-	SINE	Alu	AluJo
CAediting_1388795	chr19_54167151_-	SINE	Alu	AluJo
CAediting_1388796	chr19_54167154_-	SINE	Alu	AluJo
CAediting_1388797	chr19_54167163_-	SINE	Alu	AluJo
CAediting_1388798	chr19_54167168_-	SINE	Alu	AluJo
CAediting_1388799	chr19_54167201_-	SINE	Alu	AluJo
CAediting_1388800	chr19_54167233_-	SINE	Alu	AluJo
CAediting_1388801	chr19_54167241_-	SINE	Alu	AluJo
CAediting_1388802	chr19_54167249_-	SINE	Alu	AluJo
CAediting_1388803	chr19_54167257_-	SINE	Alu	AluJo
CAediting_1388804	chr19_54167301_-	SINE	Alu	AluSx1
CAediting_1388805	chr19_54167313_-	SINE	Alu	AluSx1
CAediting_1388806	chr19_54167341_-	SINE	Alu	AluSx1
CAediting_1388807	chr19_54167353_-	SINE	Alu	AluSx1
CAediting_1388808	chr19_54167388_-	SINE	Alu	AluSx1
CAediting_1388809	chr19_54167392_-	SINE	Alu	AluSx1
CAediting_1388810	chr19_54167395_-	SINE	Alu	AluSx1
CAediting_1388811	chr19_54167410_-	SINE	Alu	AluSx1
CAediting_1388812	chr19_54167411_-	SINE	Alu	AluSx1
CAediting_1388813	chr19_54167437_-	SINE	Alu	AluSx1
CAediting_1388814	chr19_54167447_-	SINE	Alu	AluSx1
CAediting_1388815	chr19_54167476_-	SINE	Alu	AluSx1
CAediting_1388816	chr19_54167477_-	SINE	Alu	AluSx1
CAediting_1388817	chr19_54167502_-	SINE	Alu	AluSx1
CAediting_1388818	chr19_54167515_-	SINE	Alu	AluSx1
CAediting_1388819	chr19_54167553_-	SINE	Alu	AluSx1
CAediting_1388820	chr19_54167557_-	SINE	Alu	AluSx1
CAediting_1388821	chr19_54167631_-	SINE	Alu	AluYh7
CAediting_1388822	chr19_54167637_-	SINE	Alu	AluYh7
CAediting_1388823	chr19_54167646_-	SINE	Alu	AluYh7
CAediting_1388824	chr19_54167656_-	SINE	Alu	AluYh7
CAediting_1388825	chr19_54167666_-	SINE	Alu	AluYh7
CAediting_1388826	chr19_54167681_-	SINE	Alu	AluYh7
CAediting_1388827	chr19_54167692_-	SINE	Alu	AluYh7
CAediting_1388828	chr19_54167701_-	SINE	Alu	AluYh7
CAediting_1388834	chr19_54167797_-	SINE	Alu	AluSq4
CAediting_1388835	chr19_54167806_-	SINE	Alu	AluSq4
CAediting_1388836	chr19_54167818_-	SINE	Alu	AluSq4
CAediting_1388837	chr19_54167849_-	SINE	Alu	AluSq4
CAediting_1388838	chr19_54167881_-	SINE	Alu	AluSq4
CAediting_1388839	chr19_54167895_-	SINE	Alu	AluSq4
CAediting_1388840	chr19_54167898_-	SINE	Alu	AluSq4
CAediting_1388841	chr19_54167941_-	SINE	Alu	AluSq4
CAediting_1388842	chr19_54167954_-	SINE	Alu	AluSq4
CAediting_1388843	chr19_54167955_-	SINE	Alu	AluSq4
CAediting_1388844	chr19_54167980_-	SINE	Alu	AluSq4
CAediting_1388845	chr19_54167981_-	SINE	Alu	AluSq4
CAediting_1388846	chr19_54168000_-	SINE	Alu	AluSq4
CAediting_1388847	chr19_54168006_-	SINE	Alu	AluSq4
CAediting_1388848	chr19_54168016_-	SINE	Alu	AluSq4
CAediting_1388849	chr19_54168017_-	SINE	Alu	AluSq4
CAediting_1388851	chr19_54169091_-	SINE	Alu	AluSx
CAediting_1388852	chr19_54169101_-	SINE	Alu	AluSx
CAediting_1388853	chr19_54169110_-	SINE	Alu	AluSx
CAediting_1388854	chr19_54169123_-	SINE	Alu	AluSx
CAediting_1388855	chr19_54169130_-	SINE	Alu	AluSx
CAediting_1388856	chr19_54169131_-	SINE	Alu	AluSx
CAediting_1388857	chr19_54169139_-	SINE	Alu	AluSx
CAediting_1388858	chr19_54169142_-	SINE	Alu	AluSx
CAediting_1388859	chr19_54169145_-	SINE	Alu	AluSx
CAediting_1388860	chr19_54169147_-	SINE	Alu	AluSx
CAediting_1388861	chr19_54169162_-	SINE	Alu	AluSx
CAediting_1388862	chr19_54169166_-	SINE	Alu	AluSx
CAediting_1388863	chr19_54169172_-	SINE	Alu	AluSx
CAediting_1388864	chr19_54169198_-	SINE	Alu	AluSx
CAediting_1388865	chr19_54169202_-	SINE	Alu	AluSx
CAediting_1388866	chr19_54169203_-	SINE	Alu	AluSx
CAediting_1388867	chr19_54169204_-	SINE	Alu	AluSx
CAediting_1388868	chr19_54169207_-	SINE	Alu	AluSx
CAediting_1388869	chr19_54169209_-	SINE	Alu	AluSx
CAediting_1388870	chr19_54169210_-	SINE	Alu	AluSx
CAediting_1388871	chr19_54169211_-	SINE	Alu	AluSx
CAediting_1388872	chr19_54169212_-	SINE	Alu	AluSx
CAediting_1388873	chr19_54169213_-	SINE	Alu	AluSx
CAediting_1388874	chr19_54169228_-	SINE	Alu	AluSx
CAediting_1388875	chr19_54169229_-	SINE	Alu	AluSx
CAediting_1388876	chr19_54169230_-	SINE	Alu	AluSx
CAediting_1388877	chr19_54169236_-	SINE	Alu	AluSx
CAediting_1388878	chr19_54169238_-	SINE	Alu	AluSx
CAediting_1388879	chr19_54169251_-	SINE	Alu	AluSx
CAediting_1388880	chr19_54169258_-	SINE	Alu	AluSx
CAediting_1388881	chr19_54169259_-	SINE	Alu	AluSx
CAediting_1388882	chr19_54169261_-	SINE	Alu	AluSx
CAediting_1388883	chr19_54169262_-	SINE	Alu	AluSx
CAediting_1388884	chr19_54169267_-	SINE	Alu	AluSx
CAediting_1388885	chr19_54169272_-	SINE	Alu	AluSx
CAediting_1388886	chr19_54169275_-	SINE	Alu	AluSx
CAediting_1388887	chr19_54169299_-	SINE	Alu	AluSx
CAediting_1388888	chr19_54169307_-	SINE	Alu	AluSx
CAediting_1388889	chr19_54169308_-	SINE	Alu	AluSx
CAediting_1388890	chr19_54169316_-	SINE	Alu	AluSx
CAediting_1388891	chr19_54170067_-	SINE	Alu	AluSx1
CAediting_1388892	chr19_54170092_-	SINE	Alu	AluSx1
CAediting_1388893	chr19_54171194_-	SINE	Alu	AluSx1
CAediting_1388894	chr19_54171223_-	SINE	Alu	AluSx1
CAediting_1388895	chr19_54171246_-	SINE	Alu	AluSx1
CAediting_1388896	chr19_54171247_-	SINE	Alu	AluSx1

Top

RNA A-to-I editing events in the alternative splicing sites for TMC4

RNA A-to-I editing(s) in the alternative splicing sites.

AStype	CAeditomID	Editing position	AS position	AS direction	Exonic location	Wildtype sequence	Wildtype splicing strength	RNA edited sequence	RNA edited splicing strength
IR	CAediting_1388701	chr19_54161645_-	54161628:54161650	3SS	0+15i	AGGGGAATTGCTTGAACCAGGGA	0.04	AGGGGGATTGCTTGAACCAGGGA	1.01
IR	CAediting_1388730	chr19_54163591_-	54163587:54163609	3SS	0+2i	ATCCTGACTCTGTTGGCCAGGTG	5.58	ATCCTGACTCTGTTGGCCGGGTG	-2.37

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000167608.10.TMC4.

Correlation between RNA A-to-I editing and PSI for ENSG00000167608.10.TMC4.

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for TMC4

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

Top

Protein coding region RNA A-to-I editings for TMC4

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

Top

The effects of the RNA editing to the miRNA binding sites for TMC4

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for TMC4

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

Top

Relation with ADAR for TMC4

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
OV	CAediting_1388880	chr19_54169258_-	0.014191625611386	0.273244937882822	.	.	.	.

Top

Relation with cancer stages for TMC4

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
STAD	pathologic_stage	CAediting_1388818	chr19_54167515_-	0.044574501610655	0.28826814258825

Top

Relation with survival for TMC4

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

Top

RelatedDrugs for TMC4

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

Top

RelatedDiseases for TMC4

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene