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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: RUNDC1 (CAeditome ID:146923)

Gene summary for RUNDC1

check button Gene summary
Gene informationGene symbol

RUNDC1

Gene ID

146923

Gene nameRUN domain containing 1
SynonymsRUND1
Cytomap

17q21.31

Type of geneprotein-coding
DescriptionRUN domain-containing protein 1
Modification date20210518
UniProtAcc

Q96C34

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID

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RNA A-to-I events for RUNDC1

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000198863.6

check button RNA A-to-I editing events in Cancer.
CAediting_1198982(42982050, +), CAediting_1198983(42982085, +), CAediting_1198984(42982086, +), CAediting_1198985(42982089, +), CAediting_1198986(42982125, +), CAediting_1198987(42982221, +), CAediting_1198988(42982222, +), CAediting_1198989(42982249, +), CAediting_1198990(42982261, +), CAediting_1198991(42982692, +), CAediting_1198992(42982702, +), CAediting_1198993(42982718, +), CAediting_1198994(42982719, +), CAediting_1198995(42982735, +), CAediting_1198996(42982754, +), CAediting_1198997(42982759, +), CAediting_1198998(42982793, +), CAediting_1198999(42982858, +), CAediting_1199000(42982866, +), CAediting_1199001(42982867, +), CAediting_1199002(42982872, +), CAediting_1199003(42982876, +), CAediting_1199004(42982889, +), CAediting_1199005(42982893, +), CAediting_1199006(42982908, +), CAediting_1199007(42982919, +), CAediting_1199008(42982932, +), CAediting_1199009(42982936, +), CAediting_1199010(42982937, +), CAediting_1199011(42982939, +), CAediting_1199012(42982967, +), CAediting_1199013(42982978, +), CAediting_1199014(42982979, +), CAediting_1199015(42982990, +), CAediting_1199016(42982991, +), CAediting_1199017(42983023, +), CAediting_1199018(42983025, +), CAediting_1199019(42983042, +), CAediting_1199020(42983050, +), CAediting_1199021(42983053, +), CAediting_1199022(42983058, +), CAediting_1199023(42983059, +), CAediting_1199024(42983064, +), CAediting_1199025(42983065, +), CAediting_1199026(42983080, +), CAediting_1199027(42983081, +), CAediting_1199028(42983088, +), CAediting_1199029(42983094, +), CAediting_1199030(42983097, +), CAediting_1199031(42983102, +), CAediting_1199032(42983107, +), CAediting_1199033(42983110, +), CAediting_1199034(42983123, +), CAediting_1199035(42983125, +), CAediting_1199036(42983137, +), CAediting_1199037(42983139, +), CAediting_1199038(42983147, +), CAediting_1199039(42983152, +), CAediting_1199040(42983161, +), CAediting_1199041(42983162, +), CAediting_1199042(42983164, +), CAediting_1199043(42983166, +), CAediting_1199044(42983169, +), CAediting_1199045(42983170, +), CAediting_1199046(42983183, +), CAediting_1199047(42983409, +), CAediting_1199048(42983441, +), CAediting_1199049(42983469, +), CAediting_1199050(42983515, +), CAediting_1199051(42983575, +), CAediting_1199052(42983582, +), CAediting_1199053(42983608, +), CAediting_1199054(42983611, +), CAediting_1199055(42983646, +), CAediting_1199056(42983789, +), CAediting_1199057(42983946, +), CAediting_1199058(42984028, +), CAediting_1199059(42984031, +), CAediting_1199060(42984039, +), CAediting_1199061(42984040, +), CAediting_1199062(42984082, +), CAediting_1199063(42984131, +), CAediting_1199064(42984186, +), CAediting_1199065(42984211, +), CAediting_1199066(42984228, +), CAediting_1199067(42984238, +), CAediting_1199068(42984250, +), CAediting_1199069(42984339, +), CAediting_1199070(42984350, +), CAediting_1199071(42984361, +), CAediting_1199072(42984367, +), CAediting_1199073(42984374, +), CAediting_1199074(42984410, +), CAediting_1199075(42984461, +), CAediting_1199076(42984468, +), CAediting_1199077(42984490, +), CAediting_1199078(42984502, +), CAediting_1199079(42984503, +), CAediting_1199080(42984921, +), CAediting_1199081(42984975, +), CAediting_1199082(42985021, +), CAediting_1199083(42985025, +), CAediting_1199084(42985029, +), CAediting_1199085(42985087, +), CAediting_1199086(42985096, +), CAediting_1199087(42985109, +), CAediting_1199088(42985149, +), CAediting_1199089(42986379, +), CAediting_1199090(42988707, +), CAediting_1199091(42988764, +), CAediting_1199092(42988769, +), CAediting_1199093(42991953, +), CAediting_1199094(42991959, +), CAediting_1199095(42991960, +), CAediting_1199096(42991976, +), CAediting_1199097(42991995, +), CAediting_1199098(42991998, +), CAediting_1199099(42992027, +), CAediting_1199100(42992036, +), CAediting_1199101(42992037, +), CAediting_1199102(42992042, +), CAediting_1199103(42992048, +), CAediting_1199104(42992052, +), CAediting_1199105(42992053, +), CAediting_1199106(42992057, +), CAediting_1199107(42992068, +), CAediting_1199108(42992094, +), CAediting_1199109(42992104, +), CAediting_1199110(42992121, +), CAediting_1199111(42992127, +), CAediting_1199112(42992140, +), CAediting_1199113(42992197, +), CAediting_1199114(42992227, +), CAediting_1199115(42992313, +), CAediting_1199116(42992398, +), CAediting_1199117(42992404, +), CAediting_1199118(42992407, +), CAediting_1199119(42992408, +), CAediting_1199120(42992413, +), CAediting_1199121(42992422, +), CAediting_1199122(42992426, +), CAediting_1199123(42992481, +), CAediting_1199124(42992489, +), CAediting_1199125(42992510, +), CAediting_1199126(42992513, +), CAediting_1199127(42992514, +), CAediting_1199128(42992518, +), CAediting_1199129(42992519, +), CAediting_1199130(42992524, +),

Top

RNA editing positional annotations for RUNDC1 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_1198982chr17_42982050_+intronic
CAediting_1198983chr17_42982085_+intronic
CAediting_1198984chr17_42982086_+intronic
CAediting_1198985chr17_42982089_+intronic
CAediting_1198986chr17_42982125_+intronic
CAediting_1198987chr17_42982221_+intronic
CAediting_1198988chr17_42982222_+intronic
CAediting_1198989chr17_42982249_+intronic
CAediting_1198990chr17_42982261_+intronic
CAediting_1198991chr17_42982692_+intronic
CAediting_1198992chr17_42982702_+intronic
CAediting_1198993chr17_42982718_+intronic
CAediting_1198994chr17_42982719_+intronic
CAediting_1198995chr17_42982735_+intronic
CAediting_1198996chr17_42982754_+intronic
CAediting_1198997chr17_42982759_+intronic
CAediting_1198998chr17_42982793_+intronic
CAediting_1198999chr17_42982858_+intronic
CAediting_1199000chr17_42982866_+intronic
CAediting_1199001chr17_42982867_+intronic
CAediting_1199002chr17_42982872_+intronic
CAediting_1199003chr17_42982876_+intronic
CAediting_1199004chr17_42982889_+intronic
CAediting_1199005chr17_42982893_+intronic
CAediting_1199006chr17_42982908_+intronic
CAediting_1199007chr17_42982919_+intronic
CAediting_1199008chr17_42982932_+intronic
CAediting_1199009chr17_42982936_+intronic
CAediting_1199010chr17_42982937_+intronic
CAediting_1199011chr17_42982939_+intronic
CAediting_1199012chr17_42982967_+intronic
CAediting_1199013chr17_42982978_+intronic
CAediting_1199014chr17_42982979_+intronic
CAediting_1199015chr17_42982990_+intronic
CAediting_1199016chr17_42982991_+intronic
CAediting_1199017chr17_42983023_+intronic
CAediting_1199018chr17_42983025_+intronic
CAediting_1199019chr17_42983042_+intronic
CAediting_1199020chr17_42983050_+intronic
CAediting_1199021chr17_42983053_+intronic
CAediting_1199022chr17_42983058_+intronic
CAediting_1199023chr17_42983059_+intronic
CAediting_1199024chr17_42983064_+intronic
CAediting_1199025chr17_42983065_+intronic
CAediting_1199026chr17_42983080_+intronic
CAediting_1199027chr17_42983081_+intronic
CAediting_1199028chr17_42983088_+intronic
CAediting_1199029chr17_42983094_+intronic
CAediting_1199030chr17_42983097_+intronic
CAediting_1199031chr17_42983102_+intronic
CAediting_1199032chr17_42983107_+intronic
CAediting_1199033chr17_42983110_+intronic
CAediting_1199034chr17_42983123_+intronic
CAediting_1199035chr17_42983125_+intronic
CAediting_1199036chr17_42983137_+intronic
CAediting_1199037chr17_42983139_+intronic
CAediting_1199038chr17_42983147_+intronic
CAediting_1199039chr17_42983152_+intronic
CAediting_1199040chr17_42983161_+intronic
CAediting_1199041chr17_42983162_+intronic
CAediting_1199042chr17_42983164_+intronic
CAediting_1199043chr17_42983166_+intronic
CAediting_1199044chr17_42983169_+intronic
CAediting_1199045chr17_42983170_+intronic
CAediting_1199046chr17_42983183_+intronic
CAediting_1199047chr17_42983409_+intronic
CAediting_1199048chr17_42983441_+intronic
CAediting_1199049chr17_42983469_+intronic
CAediting_1199050chr17_42983515_+intronic
CAediting_1199051chr17_42983575_+intronic
CAediting_1199052chr17_42983582_+intronic
CAediting_1199053chr17_42983608_+intronic
CAediting_1199054chr17_42983611_+intronic
CAediting_1199055chr17_42983646_+intronic
CAediting_1199056chr17_42983789_+intronic
CAediting_1199057chr17_42983946_+intronic
CAediting_1199058chr17_42984028_+intronic
CAediting_1199059chr17_42984031_+intronic
CAediting_1199060chr17_42984039_+intronic
CAediting_1199061chr17_42984040_+intronic
CAediting_1199062chr17_42984082_+intronic
CAediting_1199063chr17_42984131_+intronic
CAediting_1199064chr17_42984186_+intronic
CAediting_1199065chr17_42984211_+intronic
CAediting_1199066chr17_42984228_+intronic
CAediting_1199067chr17_42984238_+intronic
CAediting_1199068chr17_42984250_+intronic
CAediting_1199069chr17_42984339_+intronic
CAediting_1199070chr17_42984350_+intronic
CAediting_1199071chr17_42984361_+intronic
CAediting_1199072chr17_42984367_+intronic
CAediting_1199073chr17_42984374_+intronic
CAediting_1199074chr17_42984410_+intronic
CAediting_1199075chr17_42984461_+intronic
CAediting_1199076chr17_42984468_+intronic
CAediting_1199077chr17_42984490_+intronic
CAediting_1199078chr17_42984502_+intronic
CAediting_1199079chr17_42984503_+intronic
CAediting_1199080chr17_42984921_+intronic
CAediting_1199081chr17_42984975_+intronic
CAediting_1199082chr17_42985021_+intronic
CAediting_1199083chr17_42985025_+intronic
CAediting_1199084chr17_42985029_+intronic
CAediting_1199085chr17_42985087_+intronic
CAediting_1199086chr17_42985096_+intronic
CAediting_1199087chr17_42985109_+intronic
CAediting_1199088chr17_42985149_+intronic
CAediting_1199089chr17_42986379_+intronic
CAediting_1199090chr17_42988707_+intronic
CAediting_1199091chr17_42988764_+intronic
CAediting_1199092chr17_42988769_+intronic
CAediting_1199093chr17_42991953_+UTR3
CAediting_1199094chr17_42991959_+UTR3
CAediting_1199095chr17_42991960_+UTR3
CAediting_1199096chr17_42991976_+UTR3
CAediting_1199097chr17_42991995_+UTR3
CAediting_1199098chr17_42991998_+UTR3
CAediting_1199099chr17_42992027_+UTR3
CAediting_1199100chr17_42992036_+UTR3
CAediting_1199101chr17_42992037_+UTR3
CAediting_1199102chr17_42992042_+UTR3
CAediting_1199103chr17_42992048_+UTR3
CAediting_1199104chr17_42992052_+UTR3
CAediting_1199105chr17_42992053_+UTR3
CAediting_1199106chr17_42992057_+UTR3
CAediting_1199107chr17_42992068_+UTR3
CAediting_1199108chr17_42992094_+UTR3
CAediting_1199109chr17_42992104_+UTR3
CAediting_1199110chr17_42992121_+UTR3
CAediting_1199111chr17_42992127_+UTR3
CAediting_1199112chr17_42992140_+UTR3
CAediting_1199113chr17_42992197_+UTR3
CAediting_1199114chr17_42992227_+UTR3
CAediting_1199115chr17_42992313_+UTR3
CAediting_1199116chr17_42992398_+UTR3
CAediting_1199117chr17_42992404_+UTR3
CAediting_1199118chr17_42992407_+UTR3
CAediting_1199119chr17_42992408_+UTR3
CAediting_1199120chr17_42992413_+UTR3
CAediting_1199121chr17_42992422_+UTR3
CAediting_1199122chr17_42992426_+UTR3
CAediting_1199123chr17_42992481_+UTR3
CAediting_1199124chr17_42992489_+UTR3
CAediting_1199125chr17_42992510_+UTR3
CAediting_1199126chr17_42992513_+UTR3
CAediting_1199127chr17_42992514_+UTR3
CAediting_1199128chr17_42992518_+UTR3
CAediting_1199129chr17_42992519_+UTR3
CAediting_1199130chr17_42992524_+UTR3

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_1198982chr17_42982050_+SINEAluAluJb
CAediting_1198983chr17_42982085_+SINEAluAluJb
CAediting_1198984chr17_42982086_+SINEAluAluJb
CAediting_1198985chr17_42982089_+SINEAluAluJb
CAediting_1198986chr17_42982125_+SINEAluAluJb
CAediting_1198987chr17_42982221_+SINEAluAluJb
CAediting_1198988chr17_42982222_+SINEAluAluJb
CAediting_1198989chr17_42982249_+SINEAluAluJb
CAediting_1198990chr17_42982261_+SINEAluAluJb
CAediting_1198992chr17_42982702_+SINEAluAluSp
CAediting_1198993chr17_42982718_+SINEAluAluSp
CAediting_1198994chr17_42982719_+SINEAluAluSp
CAediting_1198995chr17_42982735_+SINEAluAluSp
CAediting_1198996chr17_42982754_+SINEAluAluSp
CAediting_1198997chr17_42982759_+SINEAluAluSp
CAediting_1198998chr17_42982793_+SINEAluAluSp
CAediting_1198999chr17_42982858_+SINEAluAluSp
CAediting_1199000chr17_42982866_+SINEAluAluSp
CAediting_1199001chr17_42982867_+SINEAluAluSp
CAediting_1199002chr17_42982872_+SINEAluAluSp
CAediting_1199003chr17_42982876_+SINEAluAluSp
CAediting_1199004chr17_42982889_+SINEAluAluSp
CAediting_1199005chr17_42982893_+SINEAluAluSp
CAediting_1199006chr17_42982908_+SINEAluAluSp
CAediting_1199007chr17_42982919_+SINEAluAluSp
CAediting_1199008chr17_42982932_+SINEAluAluSp
CAediting_1199009chr17_42982936_+SINEAluAluSp
CAediting_1199010chr17_42982937_+SINEAluAluSp
CAediting_1199011chr17_42982939_+SINEAluAluSp
CAediting_1199012chr17_42982967_+SINEAluAluSp
CAediting_1199013chr17_42982978_+SINEAluAluSp
CAediting_1199014chr17_42982979_+SINEAluAluSp
CAediting_1199015chr17_42982990_+SINEAluAluSp
CAediting_1199016chr17_42982991_+SINEAluAluSp
CAediting_1199017chr17_42983023_+SINEAluAluSp
CAediting_1199018chr17_42983025_+SINEAluAluSp
CAediting_1199020chr17_42983050_+SINEAluAluJo
CAediting_1199021chr17_42983053_+SINEAluAluJo
CAediting_1199022chr17_42983058_+SINEAluAluJo
CAediting_1199023chr17_42983059_+SINEAluAluJo
CAediting_1199024chr17_42983064_+SINEAluAluJo
CAediting_1199025chr17_42983065_+SINEAluAluJo
CAediting_1199026chr17_42983080_+SINEAluAluJo
CAediting_1199027chr17_42983081_+SINEAluAluJo
CAediting_1199028chr17_42983088_+SINEAluAluJo
CAediting_1199029chr17_42983094_+SINEAluAluJo
CAediting_1199030chr17_42983097_+SINEAluAluJo
CAediting_1199031chr17_42983102_+SINEAluAluJo
CAediting_1199032chr17_42983107_+SINEAluAluJo
CAediting_1199033chr17_42983110_+SINEAluAluJo
CAediting_1199034chr17_42983123_+SINEAluAluJo
CAediting_1199035chr17_42983125_+SINEAluAluJo
CAediting_1199036chr17_42983137_+SINEAluAluJo
CAediting_1199037chr17_42983139_+SINEAluAluJo
CAediting_1199038chr17_42983147_+SINEAluAluJo
CAediting_1199039chr17_42983152_+SINEAluAluJo
CAediting_1199040chr17_42983161_+SINEAluAluJo
CAediting_1199041chr17_42983162_+SINEAluAluJo
CAediting_1199042chr17_42983164_+SINEAluAluJo
CAediting_1199043chr17_42983166_+SINEAluAluJo
CAediting_1199044chr17_42983169_+SINEAluAluJo
CAediting_1199045chr17_42983170_+SINEAluAluJo
CAediting_1199046chr17_42983183_+SINEAluAluJo
CAediting_1199047chr17_42983409_+SINEAluAluJb
CAediting_1199048chr17_42983441_+SINEAluAluJb
CAediting_1199049chr17_42983469_+SINEAluAluJb
CAediting_1199050chr17_42983515_+SINEAluAluJb
CAediting_1199051chr17_42983575_+SINEAluAluJb
CAediting_1199052chr17_42983582_+SINEAluAluJb
CAediting_1199053chr17_42983608_+SINEAluAluJb
CAediting_1199054chr17_42983611_+SINEAluAluJb
CAediting_1199055chr17_42983646_+SINEAluAluJb
CAediting_1199056chr17_42983789_+SINEAluAluSz6
CAediting_1199057chr17_42983946_+SINEAluAluSz6
CAediting_1199058chr17_42984028_+SINEAluAluJr
CAediting_1199059chr17_42984031_+SINEAluAluJr
CAediting_1199060chr17_42984039_+SINEAluAluJr
CAediting_1199061chr17_42984040_+SINEAluAluJr
CAediting_1199062chr17_42984082_+SINEAluAluJr
CAediting_1199063chr17_42984131_+SINEAluAluJr
CAediting_1199064chr17_42984186_+SINEAluAluJr
CAediting_1199065chr17_42984211_+SINEAluAluJr
CAediting_1199066chr17_42984228_+SINEAluAluJr
CAediting_1199067chr17_42984238_+SINEAluAluJr
CAediting_1199068chr17_42984250_+SINEAluAluJr
CAediting_1199069chr17_42984339_+SINEAluAluSz6
CAediting_1199070chr17_42984350_+SINEAluAluSz6
CAediting_1199071chr17_42984361_+SINEAluAluSz6
CAediting_1199072chr17_42984367_+SINEAluAluSz6
CAediting_1199073chr17_42984374_+SINEAluAluSz6
CAediting_1199074chr17_42984410_+SINEAluAluSz6
CAediting_1199075chr17_42984461_+SINEAluAluSz6
CAediting_1199076chr17_42984468_+SINEAluAluSz6
CAediting_1199077chr17_42984490_+SINEAluAluSz6
CAediting_1199078chr17_42984502_+SINEAluAluSz6
CAediting_1199079chr17_42984503_+SINEAluAluSz6
CAediting_1199080chr17_42984921_+SINEAluAluSx
CAediting_1199081chr17_42984975_+SINEAluAluSx
CAediting_1199082chr17_42985021_+SINEAluAluSx
CAediting_1199083chr17_42985025_+SINEAluAluSx
CAediting_1199084chr17_42985029_+SINEAluAluSx
CAediting_1199085chr17_42985087_+SINEAluAluSx
CAediting_1199086chr17_42985096_+SINEAluAluSx
CAediting_1199087chr17_42985109_+SINEAluAluSx
CAediting_1199088chr17_42985149_+SINEAluAluSx
CAediting_1199089chr17_42986379_+SINEAluAluJb
CAediting_1199090chr17_42988707_+SINEAluAluJr4
CAediting_1199091chr17_42988764_+SINEAluAluJr4
CAediting_1199092chr17_42988769_+SINEAluAluJr4
CAediting_1199093chr17_42991953_+SINEAluAluY
CAediting_1199094chr17_42991959_+SINEAluAluY
CAediting_1199095chr17_42991960_+SINEAluAluY
CAediting_1199096chr17_42991976_+SINEAluAluY
CAediting_1199097chr17_42991995_+SINEAluAluY
CAediting_1199098chr17_42991998_+SINEAluAluY
CAediting_1199099chr17_42992027_+SINEAluAluY
CAediting_1199100chr17_42992036_+SINEAluAluY
CAediting_1199101chr17_42992037_+SINEAluAluY
CAediting_1199102chr17_42992042_+SINEAluAluY
CAediting_1199103chr17_42992048_+SINEAluAluY
CAediting_1199104chr17_42992052_+SINEAluAluY
CAediting_1199105chr17_42992053_+SINEAluAluY
CAediting_1199106chr17_42992057_+SINEAluAluY
CAediting_1199107chr17_42992068_+SINEAluAluY
CAediting_1199108chr17_42992094_+SINEAluAluY
CAediting_1199109chr17_42992104_+SINEAluAluY
CAediting_1199110chr17_42992121_+SINEAluAluY
CAediting_1199111chr17_42992127_+SINEAluAluY
CAediting_1199112chr17_42992140_+SINEAluAluY
CAediting_1199113chr17_42992197_+SINEAluAluY
CAediting_1199114chr17_42992227_+SINEAluAluY
CAediting_1199115chr17_42992313_+SINEAluAluSx
CAediting_1199116chr17_42992398_+SINEAluAluSx
CAediting_1199117chr17_42992404_+SINEAluAluSx
CAediting_1199118chr17_42992407_+SINEAluAluSx
CAediting_1199119chr17_42992408_+SINEAluAluSx
CAediting_1199120chr17_42992413_+SINEAluAluSx
CAediting_1199121chr17_42992422_+SINEAluAluSx
CAediting_1199122chr17_42992426_+SINEAluAluSx
CAediting_1199123chr17_42992481_+SINEAluAluSx
CAediting_1199124chr17_42992489_+SINEAluAluSx
CAediting_1199125chr17_42992510_+SINEAluAluSx
CAediting_1199126chr17_42992513_+SINEAluAluSx
CAediting_1199127chr17_42992514_+SINEAluAluSx
CAediting_1199128chr17_42992518_+SINEAluAluSx
CAediting_1199129chr17_42992519_+SINEAluAluSx
CAediting_1199130chr17_42992524_+SINEAluAluSx

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RNA A-to-I editing events in the alternative splicing sites for RUNDC1

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000198863.6.RUNDC1.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000198863.6.RUNDC1.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for RUNDC1

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for RUNDC1

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for RUNDC1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1199103chr17_42992048_+ENSG00000198863.6ENST00000361677hsa-miR-374b-3p42992045429920528mer-1a4299203042992052151.00-12.20
CAediting_1199103chr17_42992048_+ENSG00000198863.6ENST00000361677hsa-miR-4756-3p42992041429920477mer-m84299202942992048151.00-16.61
CAediting_1199117chr17_42992404_+ENSG00000198863.6ENST00000361677hsa-miR-374b-3p42992401429924088mer-1a4299238642992408151.00-12.20
CAediting_1199117chr17_42992404_+ENSG00000198863.6ENST00000361677hsa-miR-4756-3p42992397429924037mer-m84299238542992404151.00-16.82
CAediting_1199118chr17_42992407_+ENSG00000198863.6ENST00000361677hsa-miR-222-5p42992401429924088mer-1a4299238842992408141.00-9.81
CAediting_1199118chr17_42992407_+ENSG00000198863.6ENST00000361677hsa-miR-30a-3p42992403429924108mer-1a4299238642992410154.00-11.94
CAediting_1199118chr17_42992407_+ENSG00000198863.6ENST00000361677hsa-miR-30d-3p42992403429924108mer-1a4299238842992410153.00-12.10
CAediting_1199118chr17_42992407_+ENSG00000198863.6ENST00000361677hsa-miR-30e-3p42992403429924108mer-1a4299238642992410154.00-14.00
CAediting_1199118chr17_42992407_+ENSG00000198863.6ENST00000361677hsa-miR-93642992400429924078mer-1a4299238542992407159.00-22.75
CAediting_1199119chr17_42992408_+ENSG00000198863.6ENST00000361677hsa-miR-32542992401429924088mer-1a4299238642992408145.00-11.15
CAediting_1199094chr17_42991959_+ENSG00000198863.6ENST00000361677hsa-miR-513a-5p42991953429919597mer-m84299194342991960144.00-17.77
CAediting_1199094chr17_42991959_+ENSG00000198863.6ENST00000361677hsa-miR-513a-5p42991953429919597mer-m84299194342991960144.00-17.77
CAediting_1199094chr17_42991959_+ENSG00000198863.6ENST00000361677hsa-miR-63842991958429919647mer-1a4299194042991964151.00-32.52
CAediting_1199096chr17_42991976_+ENSG00000198863.6ENST00000361677hsa-miR-10392-3p42991974429919818mer-1a4299195742991981144.00-22.69
CAediting_1199099chr17_42992027_+ENSG00000198863.6ENST00000361677hsa-miR-430542992020429920267mer-m84299201042992027140.00-9.22
CAediting_1199101chr17_42992037_+ENSG00000198863.6ENST00000361677hsa-miR-412-3p42992030429920367mer-m84299201542992037148.00-14.03
CAediting_1199101chr17_42992037_+ENSG00000198863.6ENST00000361677hsa-miR-6754-3p42992030429920367mer-m84299201542992037141.00-12.85
CAediting_1199102chr17_42992042_+ENSG00000198863.6ENST00000361677hsa-miR-483-5p42992038429920447mer-m84299202442992045140.00-14.15
CAediting_1199106chr17_42992057_+ENSG00000198863.6ENST00000361677hsa-miR-153-5p42992050429920567mer-m84299203542992057148.00-8.16
CAediting_1199106chr17_42992057_+ENSG00000198863.6ENST00000361677hsa-miR-3680-3p42992054429920618mer-1a4299203942992061140.00-14.24
CAediting_1199106chr17_42992057_+ENSG00000198863.6ENST00000361677hsa-miR-3680-3p42992054429920618mer-1a4299203942992061140.00-14.24
CAediting_1199108chr17_42992094_+ENSG00000198863.6ENST00000361677hsa-miR-140-3p42992089429920957mer-m84299207642992096147.00-22.25
CAediting_1199108chr17_42992094_+ENSG00000198863.6ENST00000361677hsa-miR-3619-3p42992092429920976mer4299207642992098147.00-30.18
CAediting_1199111chr17_42992127_+ENSG00000198863.6ENST00000361677hsa-miR-4639-3p42992122429921287mer-m84299210742992129148.00-23.56
CAediting_1199111chr17_42992127_+ENSG00000198863.6ENST00000361677hsa-miR-6777-3p42992123429921297mer-m84299211142992130164.00-29.74
CAediting_1199113chr17_42992197_+ENSG00000198863.6ENST00000361677hsa-miR-118142992190429921967mer-m84299217742992197142.00-22.01
CAediting_1199115chr17_42992313_+ENSG00000198863.6ENST00000361677hsa-miR-513a-5p42992307429923137mer-m84299229742992314144.00-16.68
CAediting_1199115chr17_42992313_+ENSG00000198863.6ENST00000361677hsa-miR-513a-5p42992307429923137mer-m84299229742992314144.00-16.68
CAediting_1199116chr17_42992398_+ENSG00000198863.6ENST00000361677hsa-miR-483-5p42992394429924007mer-m84299238042992401140.00-14.01
CAediting_1199120chr17_42992413_+ENSG00000198863.6ENST00000361677hsa-miR-3680-3p42992410429924178mer-1a4299239542992417140.00-14.24
CAediting_1199120chr17_42992413_+ENSG00000198863.6ENST00000361677hsa-miR-3680-3p42992410429924178mer-1a4299239542992417140.00-14.24
CAediting_1199121chr17_42992422_+ENSG00000198863.6ENST00000361677hsa-miR-4662a-5p42992419429924257mer-m84299240442992426159.00-15.01
CAediting_1199123chr17_42992481_+ENSG00000198863.6ENST00000361677hsa-miR-443142992477429924837mer-m84299246342992484140.00-18.02
CAediting_1199124chr17_42992489_+ENSG00000198863.6ENST00000361677hsa-miR-3136-3p42992485429924917mer-m84299247142992492159.00-15.80
CAediting_1199124chr17_42992489_+ENSG00000198863.6ENST00000361677hsa-miR-7155-3p42992485429924917mer-m84299247442992492145.00-18.68
CAediting_1199126chr17_42992513_+ENSG00000198863.6ENST00000361677hsa-miR-1304-3p42992508429925147mer-m84299249442992515167.00-26.03
CAediting_1199126chr17_42992513_+ENSG00000198863.6ENST00000361677hsa-miR-428442992510429925178mer-1a4299250042992517144.00-13.83
CAediting_1199127chr17_42992514_+ENSG00000198863.6ENST00000361677hsa-miR-24-1-5p42992509429925157mer-m84299249442992516150.00-19.74
CAediting_1199127chr17_42992514_+ENSG00000198863.6ENST00000361677hsa-miR-24-2-5p42992509429925157mer-m84299249342992516150.00-19.04
CAediting_1199128chr17_42992518_+ENSG00000198863.6ENST00000361677hsa-miR-4638-5p42992513429925208mer-1a4299249942992520148.00-19.23
CAediting_1199098chr17_42991998_+ENSG00000198863.6ENST00000361677hsa-miR-10a-5p42991994429920007mer-m84299198042992001161.00-26.28
CAediting_1199098chr17_42991998_+ENSG00000198863.6ENST00000361677hsa-miR-10b-5p42991994429920007mer-m84299198042992001153.00-21.49
CAediting_1199098chr17_42991998_+ENSG00000198863.6ENST00000361677hsa-miR-146b-3p42991993429919997mer-m84299198142992000147.00-20.84
CAediting_1199098chr17_42991998_+ENSG00000198863.6ENST00000361677hsa-miR-1914-5p42991993429919986mer4299197842991999140.00-30.36
CAediting_1199098chr17_42991998_+ENSG00000198863.6ENST00000361677hsa-miR-467942991991429919977mer-m84299197742991998140.00-16.56
CAediting_1199098chr17_42991998_+ENSG00000198863.6ENST00000361677hsa-miR-467942991991429919977mer-m84299197742991998140.00-16.56
CAediting_1199098chr17_42991998_+ENSG00000198863.6ENST00000361677hsa-miR-4725-5p42991995429920028mer-1a4299198242992002150.00-23.00
CAediting_1199098chr17_42991998_+ENSG00000198863.6ENST00000361677hsa-miR-504-5p42991995429920028mer-1a4299197942992002154.00-23.98
CAediting_1199100chr17_42992036_+ENSG00000198863.6ENST00000361677hsa-miR-1229-3p42992030429920367mer-m84299201542992037140.00-12.88
CAediting_1199100chr17_42992036_+ENSG00000198863.6ENST00000361677hsa-miR-193a-5p42992034429920396mer4299201942992040140.00-17.86
CAediting_1199104chr17_42992052_+ENSG00000198863.6ENST00000361677hsa-miR-32542992045429920528mer-1a4299203042992052145.00-11.15
CAediting_1199105chr17_42992053_+ENSG00000198863.6ENST00000361677hsa-miR-63042992051429920588mer-1a4299203842992058158.00-15.14
CAediting_1199109chr17_42992104_+ENSG00000198863.6ENST00000361677hsa-miR-1207-3p42992097429921037mer-m84299208642992104145.00-13.53
CAediting_1199109chr17_42992104_+ENSG00000198863.6ENST00000361677hsa-miR-64642992099429921057mer-m84299208742992106148.00-20.60

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1199094chr17_42991959_+ENSG00000198863.6ENST00000361677hsa-miR-10399-5p42991954429919607mer-m84299194042991961148-11.2
CAediting_1199095chr17_42991960_+ENSG00000198863.6ENST00000361677hsa-miR-10399-5p42991954429919607mer-m84299194042991961148-11.2
CAediting_1199115chr17_42992313_+ENSG00000198863.6ENST00000361677hsa-miR-10399-5p42992308429923147mer-m84299229442992315144-10.39
CAediting_1199114chr17_42992227_+ENSG00000198863.6ENST00000361677hsa-miR-124842992223429922297mer-m84299220442992230144-12.94
CAediting_1199096chr17_42991976_+ENSG00000198863.6ENST00000361677hsa-miR-150-5p42991970429919767mer-m84299195642991977140-15.8
CAediting_1199125chr17_42992510_+ENSG00000198863.6ENST00000361677hsa-miR-17-3p42992504429925107mer-m84299249242992511141-17.23
CAediting_1199100chr17_42992036_+ENSG00000198863.6ENST00000361677hsa-miR-193b-5p42992034429920418mer-1a4299201942992041147-14.77
CAediting_1199101chr17_42992037_+ENSG00000198863.6ENST00000361677hsa-miR-193b-5p42992034429920418mer-1a4299201942992041147-14.77
CAediting_1199110chr17_42992121_+ENSG00000198863.6ENST00000361677hsa-miR-197642992118429921258mer-1a4299210542992125149-24.39
CAediting_1199099chr17_42992027_+ENSG00000198863.6ENST00000361677hsa-miR-3152-3p42992023429920297mer-m84299201042992030153-19.79
CAediting_1199101chr17_42992037_+ENSG00000198863.6ENST00000361677hsa-miR-317042992035429920417mer-m84299201842992042155-22.03
CAediting_1199102chr17_42992042_+ENSG00000198863.6ENST00000361677hsa-miR-317042992035429920417mer-m84299201842992042155-22.03
CAediting_1199116chr17_42992398_+ENSG00000198863.6ENST00000361677hsa-miR-317042992391429923977mer-m84299237742992398140-13.8
CAediting_1199113chr17_42992197_+ENSG00000198863.6ENST00000361677hsa-miR-3664-5p42992194429922007mer-m84299217942992201151-18.82
CAediting_1199093chr17_42991953_+ENSG00000198863.6ENST00000361677hsa-miR-3934-5p42991950429919567mer-m84299193542991957155-24.89
CAediting_1199125chr17_42992510_+ENSG00000198863.6ENST00000361677hsa-miR-441842992505429925128mer-1a4299249642992512146-15.05
CAediting_1199124chr17_42992489_+ENSG00000198863.6ENST00000361677hsa-miR-443742992486429924927mer-m84299247342992493146-19.79
CAediting_1199107chr17_42992068_+ENSG00000198863.6ENST00000361677hsa-miR-4735-5p42992062429920687mer-m84299204842992069140-4.23
CAediting_1199121chr17_42992422_+ENSG00000198863.6ENST00000361677hsa-miR-4735-5p42992416429924227mer-m84299240242992423140-5.48
CAediting_1199107chr17_42992068_+ENSG00000198863.6ENST00000361677hsa-miR-477542992061429920677mer-m84299204642992068153-7.86
CAediting_1199095chr17_42991960_+ENSG00000198863.6ENST00000361677hsa-miR-5089-5p42991958429919647mer-m84299194342991965148-13.62
CAediting_1199125chr17_42992510_+ENSG00000198863.6ENST00000361677hsa-miR-509-3-5p42992505429925128mer-1a4299249142992512143-19.67
CAediting_1199125chr17_42992510_+ENSG00000198863.6ENST00000361677hsa-miR-509-5p42992505429925128mer-1a4299249242992512142-14.17
CAediting_1199125chr17_42992510_+ENSG00000198863.6ENST00000361677hsa-miR-509-5p42992505429925128mer-1a4299249242992512142-14.17
CAediting_1199093chr17_42991953_+ENSG00000198863.6ENST00000361677hsa-miR-552-3p42991951429919588mer-1a4299193842991958140-13.44
CAediting_1199094chr17_42991959_+ENSG00000198863.6ENST00000361677hsa-miR-6504-3p42991954429919607mer-m84299194042991961145-14.35
CAediting_1199095chr17_42991960_+ENSG00000198863.6ENST00000361677hsa-miR-6504-3p42991954429919607mer-m84299194042991961145-14.35
CAediting_1199115chr17_42992313_+ENSG00000198863.6ENST00000361677hsa-miR-6504-3p42992308429923147mer-m84299229442992315152-15.11
CAediting_1199112chr17_42992140_+ENSG00000198863.6ENST00000361677hsa-miR-6742-3p42992135429921428mer-1a4299212142992142153-20.13
CAediting_1199110chr17_42992121_+ENSG00000198863.6ENST00000361677hsa-miR-6747-3p42992116429921238mer-1a4299210142992123149-23.68
CAediting_1199096chr17_42991976_+ENSG00000198863.6ENST00000361677hsa-miR-6778-3p42991972429919787mer-m84299195942991979143-13.97
CAediting_1199112chr17_42992140_+ENSG00000198863.6ENST00000361677hsa-miR-6783-3p42992136429921427mer-m84299212342992143151-19.27
CAediting_1199103chr17_42992048_+ENSG00000198863.6ENST00000361677hsa-miR-6832-5p42992042429920487mer-m84299202742992049142-15.43
CAediting_1199117chr17_42992404_+ENSG00000198863.6ENST00000361677hsa-miR-6832-5p42992398429924047mer-m84299238342992405142-15.43
CAediting_1199116chr17_42992398_+ENSG00000198863.6ENST00000361677hsa-miR-6855-5p42992391429923977mer-m84299237442992398145-17.8
CAediting_1199102chr17_42992042_+ENSG00000198863.6ENST00000361677hsa-miR-6890-5p42992036429920427mer-m84299202342992043146-14.01
CAediting_1199116chr17_42992398_+ENSG00000198863.6ENST00000361677hsa-miR-6890-5p42992392429923987mer-m84299237942992399142-13.42
CAediting_1199115chr17_42992313_+ENSG00000198863.6ENST00000361677hsa-miR-7151-3p42992306429923138mer-1a4299228942992313145-16.51
CAediting_1199108chr17_42992094_+ENSG00000198863.6ENST00000361677hsa-miR-805242992093429920997mer-1a4299207942992099145-20.57
CAediting_1199097chr17_42991995_+ENSG00000198863.6ENST00000361677hsa-miR-807042991991429919977mer-1a4299197842991997141-17.83

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_393chr1_1167164_+ENSG00000198863.6ENST00000361677hsa-miR-200b-3p42992775429927817mer-m84299276142992782140-10.46
CAediting_393chr1_1167164_+ENSG00000198863.6ENST00000361677hsa-miR-200b-3p42993370429933767mer-m84299335542993377155-13.74
CAediting_980496chr14_31014685_-ENSG00000198863.6ENST00000589705hsa-miR-624-3p42990972429909787mer-m84299096142990979142-18.56
CAediting_1229414chr17_67471546_+ENSG00000198863.6ENST00000361677hsa-miR-548aa42993256429932627mer-m84299323542993263151-15.6
CAediting_1399425chr20_1392958_-ENSG00000198863.6ENST00000361677hsa-miR-6869-5p42993027429930348mer-1a4299301342993034141-15.51

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1399425chr20_1392958_-ENSG00000198863.6ENST00000361677hsa-miR-6869-5p42992455429924617mer-m84299244042992462146-19.73

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for RUNDC1

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for RUNDC1

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
STADCAediting_1199044chr17_42983169_+0.03261822498371180.285992319695419..0.03761591487797050.278577446058687
LGGCAediting_1199103chr17_42992048_+....0.0006506084926310420.286732513948839

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Relation with cancer stages for RUNDC1

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

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Relation with survival for RUNDC1

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for RUNDC1

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for RUNDC1

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource