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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: VTI1A (CAeditome ID:143187)

Gene summary for VTI1A

check button Gene summary
Gene informationGene symbol

VTI1A

Gene ID

143187

Gene namevesicle transport through interaction with t-SNAREs 1A
SynonymsMMDS3|MVti1|VTI1RP2|Vti1-rp2
Cytomap

10q25.2

Type of geneprotein-coding
Descriptionvesicle transport through interaction with t-SNAREs homolog 1ASNARE Vti1a-beta proteinvesicle transport v-SNARE protein Vti1-like 2
Modification date20210518
UniProtAcc

Q96AJ9

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
VTI1A

GO:0005484

Vesicle transport through interaction with t-SNAREs homolog 1A

15215310

VTI1A

GO:0042147

Vesicle transport through interaction with t-SNAREs homolog 1A

15215310

VTI1A

GO:0042147

Vesicle transport through interaction with t-SNAREs homolog 1A

18195106

VTI1A

GO:0005776

Vesicle transport through interaction with t-SNAREs homolog 1A

24095276

VTI1A

GO:0005794

Vesicle transport through interaction with t-SNAREs homolog 1A

0000052

VTI1A

GO:0005794

Vesicle transport through interaction with t-SNAREs homolog 1A

19224922

VTI1A

GO:0043231

Vesicle transport through interaction with t-SNAREs homolog 1A

0000052


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RNA A-to-I events for VTI1A

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000151532.12
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_782966(112449490, +), CAediting_782967(112449498, +), CAediting_782968(112449499, +), CAediting_782969(112449504, +), CAediting_782970(112449505, +), CAediting_782971(112449506, +), CAediting_782972(112449507, +), CAediting_782973(112449515, +), CAediting_782974(112449525, +), CAediting_782975(112449539, +), CAediting_782976(112449553, +), CAediting_782977(112449558, +), CAediting_782978(112449568, +), CAediting_782979(112449570, +), CAediting_782980(112449578, +), CAediting_782981(112449589, +), CAediting_782982(112449593, +), CAediting_782983(112449595, +), CAediting_782984(112449596, +), CAediting_782985(112449601, +), CAediting_782986(112449603, +), CAediting_782987(112449632, +), CAediting_782988(112449633, +), CAediting_782989(112449638, +), CAediting_782990(112449646, +), CAediting_782991(112449665, +), CAediting_782992(112449673, +), CAediting_782993(112449674, +), CAediting_782994(112449698, +), CAediting_782995(112449703, +), CAediting_782996(112449705, +), CAediting_782997(112449919, +), CAediting_782998(112449936, +), CAediting_782999(112449950, +), CAediting_783000(112449955, +), CAediting_783001(112449956, +), CAediting_783002(112449963, +), CAediting_783003(112449969, +), CAediting_783004(112449974, +), CAediting_783005(112449991, +), CAediting_783006(112450004, +), CAediting_783007(112450010, +), CAediting_783008(112450015, +), CAediting_783009(112450024, +), CAediting_783010(112450027, +), CAediting_783011(112450092, +), CAediting_783012(112450101, +), CAediting_783013(112450113, +), CAediting_783014(112450114, +), CAediting_783015(112450126, +), CAediting_783016(112450130, +), CAediting_783017(112450135, +), CAediting_783018(112450139, +), CAediting_783019(112450153, +), CAediting_783020(112450154, +), CAediting_783021(112450166, +), CAediting_783022(112450168, +), CAediting_783023(112450175, +), CAediting_783024(112500288, +), CAediting_783025(112500313, +), CAediting_783026(112500314, +), CAediting_783027(112500367, +), CAediting_783028(112500427, +), CAediting_783029(112500457, +), CAediting_783030(112544329, +), CAediting_783031(112544330, +), CAediting_783032(112544347, +), CAediting_783033(112544369, +), CAediting_783034(112544410, +), CAediting_783035(112544462, +), CAediting_783036(112546288, +), CAediting_783037(112548452, +), CAediting_783038(112567053, +), CAediting_783039(112567081, +), CAediting_783040(112567104, +), CAediting_783041(112567109, +), CAediting_783042(112567142, +), CAediting_783043(112567172, +), CAediting_783044(112568243, +), CAediting_783045(112568342, +), CAediting_783046(112568346, +), CAediting_783047(112568347, +), CAediting_783048(112568386, +), CAediting_783049(112572575, +), CAediting_783050(112591445, +), CAediting_783051(112597240, +), CAediting_783052(112599709, +), CAediting_783053(112612450, +), CAediting_783054(112612480, +), CAediting_783055(112612493, +), CAediting_783056(112612606, +), CAediting_783057(112612612, +), CAediting_783058(112620669, +), CAediting_783059(112652620, +), CAediting_783060(112652642, +), CAediting_783061(112652653, +), CAediting_783062(112652660, +), CAediting_783063(112652668, +), CAediting_783064(112652709, +), CAediting_783065(112681095, +), CAediting_783066(112681145, +), CAediting_783067(112681150, +), CAediting_783068(112681199, +), CAediting_783069(112681207, +), CAediting_783070(112681208, +), CAediting_783071(112681221, +), CAediting_783072(112681223, +), CAediting_783073(112681242, +), CAediting_783074(112681246, +), CAediting_783075(112681247, +), CAediting_783076(112681253, +), CAediting_783077(112681264, +), CAediting_783078(112681283, +), CAediting_783079(112681301, +), CAediting_783080(112681315, +), CAediting_783081(112681316, +), CAediting_783082(112681319, +), CAediting_783083(112681333, +), CAediting_783084(112683922, +), CAediting_783085(112683923, +), CAediting_783086(112683988, +), CAediting_783087(112688661, +), CAediting_783088(112688722, +), CAediting_783089(112688759, +), CAediting_783090(112688782, +), CAediting_783091(112691066, +), CAediting_783092(112691186, +), CAediting_783093(112694913, +), CAediting_783094(112697450, +), CAediting_783095(112699599, +), CAediting_783096(112699684, +), CAediting_783097(112699866, +), CAediting_783098(112699992, +), CAediting_783099(112699998, +), CAediting_783100(112699999, +), CAediting_783101(112700013, +), CAediting_783102(112700043, +), CAediting_783103(112700068, +), CAediting_783104(112702443, +), CAediting_783105(112702445, +), CAediting_783106(112702463, +), CAediting_783107(112702483, +), CAediting_783108(112702494, +), CAediting_783109(112702689, +), CAediting_783110(112702783, +), CAediting_783111(112702848, +), CAediting_783112(112703321, +), CAediting_783113(112703384, +), CAediting_783114(112703403, +), CAediting_783115(112703456, +), CAediting_783116(112704952, +), CAediting_783117(112704988, +), CAediting_783118(112704989, +), CAediting_783119(112704990, +), CAediting_783120(112704992, +), CAediting_783121(112705014, +), CAediting_783122(112705041, +), CAediting_783123(112705138, +), CAediting_783124(112705184, +), CAediting_783125(112707180, +), CAediting_783126(112707181, +), CAediting_783127(112707183, +), CAediting_783128(112707294, +), CAediting_783129(112707354, +), CAediting_783130(112707355, +), CAediting_783131(112719686, +), CAediting_783132(112731340, +), CAediting_783133(112731341, +), CAediting_783134(112734782, +), CAediting_783135(112734867, +), CAediting_783136(112737196, +), CAediting_783137(112740435, +), CAediting_783138(112740507, +), CAediting_783139(112740878, +), CAediting_783140(112740893, +), CAediting_783141(112741032, +), CAediting_783142(112741218, +), CAediting_783143(112741387, +), CAediting_783144(112741401, +), CAediting_783145(112741411, +), CAediting_783146(112750314, +), CAediting_783147(112750322, +), CAediting_783148(112755023, +), CAediting_783149(112755054, +), CAediting_783150(112755135, +), CAediting_783151(112755238, +), CAediting_783152(112756690, +), CAediting_783153(112756786, +), CAediting_783154(112756806, +), CAediting_783155(112756845, +), CAediting_783156(112756905, +), CAediting_783157(112756935, +), CAediting_783158(112756940, +), CAediting_783159(112756979, +), CAediting_783160(112757511, +), CAediting_783161(112757550, +), CAediting_783162(112758841, +), CAediting_783163(112760738, +), CAediting_783164(112760742, +), CAediting_783165(112776807, +), CAediting_783166(112777982, +), CAediting_783167(112778092, +), CAediting_783168(112778093, +), CAediting_783169(112778098, +), CAediting_783170(112780028, +), CAediting_783171(112780035, +), CAediting_783172(112780095, +), CAediting_783173(112780141, +), CAediting_783174(112780157, +), CAediting_783175(112780196, +), CAediting_783176(112780215, +), CAediting_783177(112780985, +), CAediting_783178(112781780, +), CAediting_783179(112792155, +), CAediting_783180(112795552, +), CAediting_783181(112795564, +), CAediting_783182(112796263, +), CAediting_783183(112796279, +), CAediting_783184(112796285, +), CAediting_783185(112796286, +), CAediting_783186(112796291, +), CAediting_783187(112796295, +), CAediting_783188(112796302, +), CAediting_783189(112796308, +), CAediting_783190(112796312, +), CAediting_783191(112796321, +), CAediting_783192(112796332, +), CAediting_783193(112796334, +), CAediting_783194(112796339, +), CAediting_783195(112796351, +), CAediting_783196(112796356, +), CAediting_783197(112802042, +), CAediting_783198(112803632, +), CAediting_783199(112803645, +), CAediting_783200(112804912, +), CAediting_783201(112805000, +), CAediting_783202(112805001, +), CAediting_783203(112805002, +), CAediting_783204(112805086, +), CAediting_783205(112805100, +), CAediting_783206(112805101, +), CAediting_783207(112805118, +), CAediting_783208(112805720, +), CAediting_783209(112805741, +), CAediting_783210(112807337, +), CAediting_783211(112807385, +), CAediting_783212(112807393, +), CAediting_783213(112807621, +), CAediting_783214(112807634, +), CAediting_783215(112807742, +), CAediting_783216(112807954, +), CAediting_783217(112807979, +), CAediting_783218(112808016, +), CAediting_783219(112808036, +), CAediting_783220(112808075, +), CAediting_783221(112808089, +), CAediting_783222(112808097, +), CAediting_783223(112808144, +), CAediting_783224(112808151, +), CAediting_783225(112808163, +), CAediting_783226(112808170, +), CAediting_783227(112808178, +), CAediting_783228(112808206, +), CAediting_783229(112808504, +), CAediting_783230(112808505, +), CAediting_783231(112808510, +), CAediting_783232(112808514, +), CAediting_783233(112808518, +), CAediting_783234(112808531, +), CAediting_783235(112808537, +), CAediting_783236(112808540, +), CAediting_783237(112810227, +), CAediting_783238(112810331, +), CAediting_783239(112811537, +), CAediting_783240(112811563, +), CAediting_783241(112811580, +), CAediting_783242(112811586, +), CAediting_783243(112811612, +), CAediting_783244(112811629, +), CAediting_783245(112811634, +), CAediting_783246(112811654, +), CAediting_783247(112811668, +),

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RNA editing positional annotations for VTI1A using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_782966chr10_112449490_+ncRNA_exonic
CAediting_782967chr10_112449498_+ncRNA_exonic
CAediting_782968chr10_112449499_+ncRNA_exonic
CAediting_782969chr10_112449504_+ncRNA_exonic
CAediting_782970chr10_112449505_+ncRNA_exonic
CAediting_782971chr10_112449506_+ncRNA_exonic
CAediting_782972chr10_112449507_+ncRNA_exonic
CAediting_782973chr10_112449515_+ncRNA_exonic
CAediting_782974chr10_112449525_+ncRNA_exonic
CAediting_782975chr10_112449539_+ncRNA_exonic
CAediting_782976chr10_112449553_+ncRNA_exonic
CAediting_782977chr10_112449558_+ncRNA_exonic
CAediting_782978chr10_112449568_+ncRNA_exonic
CAediting_782979chr10_112449570_+ncRNA_exonic
CAediting_782980chr10_112449578_+ncRNA_exonic
CAediting_782981chr10_112449589_+ncRNA_exonic
CAediting_782982chr10_112449593_+ncRNA_exonic
CAediting_782983chr10_112449595_+ncRNA_exonic
CAediting_782984chr10_112449596_+ncRNA_exonic
CAediting_782985chr10_112449601_+ncRNA_exonic
CAediting_782986chr10_112449603_+ncRNA_exonic
CAediting_782987chr10_112449632_+ncRNA_exonic
CAediting_782988chr10_112449633_+ncRNA_exonic
CAediting_782989chr10_112449638_+ncRNA_exonic
CAediting_782990chr10_112449646_+ncRNA_exonic
CAediting_782991chr10_112449665_+ncRNA_exonic
CAediting_782992chr10_112449673_+ncRNA_exonic
CAediting_782993chr10_112449674_+ncRNA_exonic
CAediting_782994chr10_112449698_+ncRNA_exonic
CAediting_782995chr10_112449703_+ncRNA_exonic
CAediting_782996chr10_112449705_+ncRNA_exonic
CAediting_782997chr10_112449919_+ncRNA_exonic
CAediting_782998chr10_112449936_+ncRNA_exonic
CAediting_782999chr10_112449950_+ncRNA_exonic
CAediting_783000chr10_112449955_+ncRNA_exonic
CAediting_783001chr10_112449956_+ncRNA_exonic
CAediting_783002chr10_112449963_+ncRNA_exonic
CAediting_783003chr10_112449969_+ncRNA_exonic
CAediting_783004chr10_112449974_+ncRNA_exonic
CAediting_783005chr10_112449991_+ncRNA_exonic
CAediting_783006chr10_112450004_+ncRNA_exonic
CAediting_783007chr10_112450010_+ncRNA_exonic
CAediting_783008chr10_112450015_+ncRNA_exonic
CAediting_783009chr10_112450024_+ncRNA_exonic
CAediting_783010chr10_112450027_+ncRNA_exonic
CAediting_783011chr10_112450092_+ncRNA_exonic
CAediting_783012chr10_112450101_+ncRNA_exonic
CAediting_783013chr10_112450113_+ncRNA_exonic
CAediting_783014chr10_112450114_+ncRNA_exonic
CAediting_783015chr10_112450126_+ncRNA_exonic
CAediting_783016chr10_112450130_+ncRNA_exonic
CAediting_783017chr10_112450135_+ncRNA_exonic
CAediting_783018chr10_112450139_+ncRNA_exonic
CAediting_783019chr10_112450153_+ncRNA_exonic
CAediting_783020chr10_112450154_+ncRNA_exonic
CAediting_783021chr10_112450166_+ncRNA_exonic
CAediting_783022chr10_112450168_+ncRNA_exonic
CAediting_783023chr10_112450175_+ncRNA_exonic
CAediting_783024chr10_112500288_+ncRNA_intronic
CAediting_783025chr10_112500313_+ncRNA_intronic
CAediting_783026chr10_112500314_+ncRNA_intronic
CAediting_783027chr10_112500367_+ncRNA_intronic
CAediting_783028chr10_112500427_+ncRNA_intronic
CAediting_783029chr10_112500457_+ncRNA_intronic
CAediting_783030chr10_112544329_+intronic
CAediting_783031chr10_112544330_+intronic
CAediting_783032chr10_112544347_+intronic
CAediting_783033chr10_112544369_+intronic
CAediting_783034chr10_112544410_+intronic
CAediting_783035chr10_112544462_+intronic
CAediting_783036chr10_112546288_+intronic
CAediting_783037chr10_112548452_+intronic
CAediting_783038chr10_112567053_+intronic
CAediting_783039chr10_112567081_+intronic
CAediting_783040chr10_112567104_+intronic
CAediting_783041chr10_112567109_+intronic
CAediting_783042chr10_112567142_+intronic
CAediting_783043chr10_112567172_+intronic
CAediting_783044chr10_112568243_+intronic
CAediting_783045chr10_112568342_+intronic
CAediting_783046chr10_112568346_+intronic
CAediting_783047chr10_112568347_+intronic
CAediting_783048chr10_112568386_+intronic
CAediting_783049chr10_112572575_+intronic
CAediting_783050chr10_112591445_+intronic
CAediting_783051chr10_112597240_+intronic
CAediting_783052chr10_112599709_+intronic
CAediting_783053chr10_112612450_+intronic
CAediting_783054chr10_112612480_+intronic
CAediting_783055chr10_112612493_+intronic
CAediting_783056chr10_112612606_+intronic
CAediting_783057chr10_112612612_+intronic
CAediting_783058chr10_112620669_+intronic
CAediting_783059chr10_112652620_+intronic
CAediting_783060chr10_112652642_+intronic
CAediting_783061chr10_112652653_+intronic
CAediting_783062chr10_112652660_+intronic
CAediting_783063chr10_112652668_+intronic
CAediting_783064chr10_112652709_+intronic
CAediting_783065chr10_112681095_+intronic
CAediting_783066chr10_112681145_+intronic
CAediting_783067chr10_112681150_+intronic
CAediting_783068chr10_112681199_+intronic
CAediting_783069chr10_112681207_+intronic
CAediting_783070chr10_112681208_+intronic
CAediting_783071chr10_112681221_+intronic
CAediting_783072chr10_112681223_+intronic
CAediting_783073chr10_112681242_+intronic
CAediting_783074chr10_112681246_+intronic
CAediting_783075chr10_112681247_+intronic
CAediting_783076chr10_112681253_+intronic
CAediting_783077chr10_112681264_+intronic
CAediting_783078chr10_112681283_+intronic
CAediting_783079chr10_112681301_+intronic
CAediting_783080chr10_112681315_+intronic
CAediting_783081chr10_112681316_+intronic
CAediting_783082chr10_112681319_+intronic
CAediting_783083chr10_112681333_+intronic
CAediting_783084chr10_112683922_+intronic
CAediting_783085chr10_112683923_+intronic
CAediting_783086chr10_112683988_+intronic
CAediting_783087chr10_112688661_+intronic
CAediting_783088chr10_112688722_+intronic
CAediting_783089chr10_112688759_+intronic
CAediting_783090chr10_112688782_+intronic
CAediting_783091chr10_112691066_+intronic
CAediting_783092chr10_112691186_+intronic
CAediting_783093chr10_112694913_+intronic
CAediting_783094chr10_112697450_+intronic
CAediting_783095chr10_112699599_+intronic
CAediting_783096chr10_112699684_+intronic
CAediting_783097chr10_112699866_+intronic
CAediting_783098chr10_112699992_+intronic
CAediting_783099chr10_112699998_+intronic
CAediting_783100chr10_112699999_+intronic
CAediting_783101chr10_112700013_+intronic
CAediting_783102chr10_112700043_+intronic
CAediting_783103chr10_112700068_+intronic
CAediting_783104chr10_112702443_+intronic
CAediting_783105chr10_112702445_+intronic
CAediting_783106chr10_112702463_+intronic
CAediting_783107chr10_112702483_+intronic
CAediting_783108chr10_112702494_+intronic
CAediting_783109chr10_112702689_+intronic
CAediting_783110chr10_112702783_+intronic
CAediting_783111chr10_112702848_+intronic
CAediting_783112chr10_112703321_+intronic
CAediting_783113chr10_112703384_+intronic
CAediting_783114chr10_112703403_+intronic
CAediting_783115chr10_112703456_+intronic
CAediting_783116chr10_112704952_+intronic
CAediting_783117chr10_112704988_+intronic
CAediting_783118chr10_112704989_+intronic
CAediting_783119chr10_112704990_+intronic
CAediting_783120chr10_112704992_+intronic
CAediting_783121chr10_112705014_+intronic
CAediting_783122chr10_112705041_+intronic
CAediting_783123chr10_112705138_+intronic
CAediting_783124chr10_112705184_+intronic
CAediting_783125chr10_112707180_+intronic
CAediting_783126chr10_112707181_+intronic
CAediting_783127chr10_112707183_+intronic
CAediting_783128chr10_112707294_+intronic
CAediting_783129chr10_112707354_+intronic
CAediting_783130chr10_112707355_+intronic
CAediting_783131chr10_112719686_+intronic
CAediting_783132chr10_112731340_+intronic
CAediting_783133chr10_112731341_+intronic
CAediting_783134chr10_112734782_+intronic
CAediting_783135chr10_112734867_+intronic
CAediting_783136chr10_112737196_+UTR3
CAediting_783137chr10_112740435_+intronic
CAediting_783138chr10_112740507_+intronic
CAediting_783139chr10_112740878_+intronic
CAediting_783140chr10_112740893_+intronic
CAediting_783141chr10_112741032_+intronic
CAediting_783142chr10_112741218_+intronic
CAediting_783143chr10_112741387_+intronic
CAediting_783144chr10_112741401_+intronic
CAediting_783145chr10_112741411_+intronic
CAediting_783146chr10_112750314_+intronic
CAediting_783147chr10_112750322_+intronic
CAediting_783148chr10_112755023_+intronic
CAediting_783149chr10_112755054_+intronic
CAediting_783150chr10_112755135_+intronic
CAediting_783151chr10_112755238_+intronic
CAediting_783152chr10_112756690_+intronic
CAediting_783153chr10_112756786_+intronic
CAediting_783154chr10_112756806_+intronic
CAediting_783155chr10_112756845_+intronic
CAediting_783156chr10_112756905_+intronic
CAediting_783157chr10_112756935_+intronic
CAediting_783158chr10_112756940_+intronic
CAediting_783159chr10_112756979_+intronic
CAediting_783160chr10_112757511_+intronic
CAediting_783161chr10_112757550_+intronic
CAediting_783162chr10_112758841_+intronic
CAediting_783163chr10_112760738_+intronic
CAediting_783164chr10_112760742_+intronic
CAediting_783165chr10_112776807_+intronic
CAediting_783166chr10_112777982_+intronic
CAediting_783167chr10_112778092_+intronic
CAediting_783168chr10_112778093_+intronic
CAediting_783169chr10_112778098_+intronic
CAediting_783170chr10_112780028_+intronic
CAediting_783171chr10_112780035_+intronic
CAediting_783172chr10_112780095_+intronic
CAediting_783173chr10_112780141_+intronic
CAediting_783174chr10_112780157_+intronic
CAediting_783175chr10_112780196_+intronic
CAediting_783176chr10_112780215_+intronic
CAediting_783177chr10_112780985_+intronic
CAediting_783178chr10_112781780_+intronic
CAediting_783179chr10_112792155_+intronic
CAediting_783180chr10_112795552_+intronic
CAediting_783181chr10_112795564_+intronic
CAediting_783182chr10_112796263_+intronic
CAediting_783183chr10_112796279_+intronic
CAediting_783184chr10_112796285_+intronic
CAediting_783185chr10_112796286_+intronic
CAediting_783186chr10_112796291_+intronic
CAediting_783187chr10_112796295_+intronic
CAediting_783188chr10_112796302_+intronic
CAediting_783189chr10_112796308_+intronic
CAediting_783190chr10_112796312_+intronic
CAediting_783191chr10_112796321_+intronic
CAediting_783192chr10_112796332_+intronic
CAediting_783193chr10_112796334_+intronic
CAediting_783194chr10_112796339_+intronic
CAediting_783195chr10_112796351_+intronic
CAediting_783196chr10_112796356_+intronic
CAediting_783197chr10_112802042_+intronic
CAediting_783198chr10_112803632_+intronic
CAediting_783199chr10_112803645_+intronic
CAediting_783200chr10_112804912_+intronic
CAediting_783201chr10_112805000_+intronic
CAediting_783202chr10_112805001_+intronic
CAediting_783203chr10_112805002_+intronic
CAediting_783204chr10_112805086_+intronic
CAediting_783205chr10_112805100_+intronic
CAediting_783206chr10_112805101_+intronic
CAediting_783207chr10_112805118_+intronic
CAediting_783208chr10_112805720_+intronic
CAediting_783209chr10_112805741_+intronic
CAediting_783210chr10_112807337_+intronic
CAediting_783211chr10_112807385_+intronic
CAediting_783212chr10_112807393_+intronic
CAediting_783213chr10_112807621_+intronic
CAediting_783214chr10_112807634_+intronic
CAediting_783215chr10_112807742_+intronic
CAediting_783216chr10_112807954_+intronic
CAediting_783217chr10_112807979_+intronic
CAediting_783218chr10_112808016_+intronic
CAediting_783219chr10_112808036_+intronic
CAediting_783220chr10_112808075_+intronic
CAediting_783221chr10_112808089_+intronic
CAediting_783222chr10_112808097_+intronic
CAediting_783223chr10_112808144_+intronic
CAediting_783224chr10_112808151_+intronic
CAediting_783225chr10_112808163_+intronic
CAediting_783226chr10_112808170_+intronic
CAediting_783227chr10_112808178_+intronic
CAediting_783228chr10_112808206_+intronic
CAediting_783229chr10_112808504_+intronic
CAediting_783230chr10_112808505_+intronic
CAediting_783231chr10_112808510_+intronic
CAediting_783232chr10_112808514_+intronic
CAediting_783233chr10_112808518_+intronic
CAediting_783234chr10_112808531_+intronic
CAediting_783235chr10_112808537_+intronic
CAediting_783236chr10_112808540_+intronic
CAediting_783237chr10_112810227_+intronic
CAediting_783238chr10_112810331_+intronic
CAediting_783239chr10_112811537_+intronic
CAediting_783240chr10_112811563_+intronic
CAediting_783241chr10_112811580_+intronic
CAediting_783242chr10_112811586_+intronic
CAediting_783243chr10_112811612_+intronic
CAediting_783244chr10_112811629_+intronic
CAediting_783245chr10_112811634_+intronic
CAediting_783246chr10_112811654_+intronic
CAediting_783247chr10_112811668_+intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_782966chr10_112449490_+SINEAluAluSp
CAediting_782967chr10_112449498_+SINEAluAluSp
CAediting_782968chr10_112449499_+SINEAluAluSp
CAediting_782969chr10_112449504_+SINEAluAluSp
CAediting_782970chr10_112449505_+SINEAluAluSp
CAediting_782971chr10_112449506_+SINEAluAluSp
CAediting_782972chr10_112449507_+SINEAluAluSp
CAediting_782973chr10_112449515_+SINEAluAluSp
CAediting_782974chr10_112449525_+SINEAluAluSp
CAediting_782975chr10_112449539_+SINEAluAluSp
CAediting_782976chr10_112449553_+SINEAluAluSp
CAediting_782977chr10_112449558_+SINEAluAluSp
CAediting_782978chr10_112449568_+SINEAluAluSp
CAediting_782979chr10_112449570_+SINEAluAluSp
CAediting_782980chr10_112449578_+SINEAluAluSp
CAediting_782981chr10_112449589_+SINEAluAluSp
CAediting_782982chr10_112449593_+SINEAluAluSp
CAediting_782983chr10_112449595_+SINEAluAluSp
CAediting_782984chr10_112449596_+SINEAluAluSp
CAediting_782985chr10_112449601_+SINEAluAluSp
CAediting_782986chr10_112449603_+SINEAluAluSp
CAediting_782987chr10_112449632_+SINEAluAluSp
CAediting_782988chr10_112449633_+SINEAluAluSp
CAediting_782989chr10_112449638_+SINEAluAluSp
CAediting_782990chr10_112449646_+SINEAluAluSp
CAediting_782991chr10_112449665_+SINEAluAluSp
CAediting_782992chr10_112449673_+SINEAluAluSp
CAediting_782993chr10_112449674_+SINEAluAluSp
CAediting_782994chr10_112449698_+SINEAluAluSp
CAediting_782995chr10_112449703_+SINEAluAluSp
CAediting_782996chr10_112449705_+SINEAluAluSp
CAediting_782997chr10_112449919_+SINEAluAluJb
CAediting_782998chr10_112449936_+SINEAluAluJb
CAediting_782999chr10_112449950_+SINEAluAluJb
CAediting_783000chr10_112449955_+SINEAluAluJb
CAediting_783001chr10_112449956_+SINEAluAluJb
CAediting_783002chr10_112449963_+SINEAluAluJb
CAediting_783003chr10_112449969_+SINEAluAluJb
CAediting_783004chr10_112449974_+SINEAluAluJb
CAediting_783005chr10_112449991_+SINEAluAluJb
CAediting_783006chr10_112450004_+SINEAluAluJb
CAediting_783007chr10_112450010_+SINEAluAluJb
CAediting_783008chr10_112450015_+SINEAluAluJb
CAediting_783009chr10_112450024_+SINEAluAluJb
CAediting_783010chr10_112450027_+SINEAluAluJb
CAediting_783011chr10_112450092_+SINEAluAluJb
CAediting_783012chr10_112450101_+SINEAluAluJb
CAediting_783013chr10_112450113_+SINEAluAluJb
CAediting_783014chr10_112450114_+SINEAluAluJb
CAediting_783015chr10_112450126_+SINEAluAluJb
CAediting_783016chr10_112450130_+SINEAluAluJb
CAediting_783017chr10_112450135_+SINEAluAluJb
CAediting_783018chr10_112450139_+SINEAluAluJb
CAediting_783019chr10_112450153_+SINEAluAluJb
CAediting_783020chr10_112450154_+SINEAluAluJb
CAediting_783021chr10_112450166_+SINEAluAluJb
CAediting_783022chr10_112450168_+SINEAluAluJb
CAediting_783023chr10_112450175_+SINEAluAluJb
CAediting_783024chr10_112500288_+SINEAluAluSc
CAediting_783025chr10_112500313_+SINEAluAluSc
CAediting_783026chr10_112500314_+SINEAluAluSc
CAediting_783027chr10_112500367_+SINEAluAluSc
CAediting_783028chr10_112500427_+SINEAluAluSc
CAediting_783029chr10_112500457_+SINEAluAluSc
CAediting_783030chr10_112544329_+SINEAluAluSx1
CAediting_783031chr10_112544330_+SINEAluAluSx1
CAediting_783032chr10_112544347_+SINEAluAluSx1
CAediting_783033chr10_112544369_+SINEAluAluSx1
CAediting_783034chr10_112544410_+SINEAluAluSx1
CAediting_783035chr10_112544462_+SINEAluAluSx1
CAediting_783036chr10_112546288_+SINEAluAluJr
CAediting_783038chr10_112567053_+SINEAluAluJb
CAediting_783039chr10_112567081_+SINEAluAluJb
CAediting_783040chr10_112567104_+SINEAluAluJb
CAediting_783041chr10_112567109_+SINEAluAluJb
CAediting_783042chr10_112567142_+SINEAluAluJb
CAediting_783043chr10_112567172_+SINEAluAluJb
CAediting_783044chr10_112568243_+SINEAluAluSq
CAediting_783045chr10_112568342_+SINEAluAluSq
CAediting_783046chr10_112568346_+SINEAluAluSq
CAediting_783047chr10_112568347_+SINEAluAluSq
CAediting_783048chr10_112568386_+SINEAluAluSq
CAediting_783049chr10_112572575_+SINEAluAluY
CAediting_783050chr10_112591445_+SINEAluAluY
CAediting_783051chr10_112597240_+SINEAluAluSp
CAediting_783052chr10_112599709_+SINEAluAluJr4
CAediting_783053chr10_112612450_+SINEAluAluJr4
CAediting_783054chr10_112612480_+SINEAluAluJr4
CAediting_783055chr10_112612493_+SINEAluAluJr4
CAediting_783056chr10_112612606_+SINEAluAluJr4
CAediting_783057chr10_112612612_+SINEAluAluJr4
CAediting_783058chr10_112620669_+SINEAluAluSq2
CAediting_783059chr10_112652620_+SINEAluAluJb
CAediting_783060chr10_112652642_+SINEAluAluJb
CAediting_783061chr10_112652653_+SINEAluAluJb
CAediting_783062chr10_112652660_+SINEAluAluJb
CAediting_783063chr10_112652668_+SINEAluAluJb
CAediting_783064chr10_112652709_+SINEAluAluJb
CAediting_783065chr10_112681095_+SINEAluAluJr
CAediting_783066chr10_112681145_+SINEAluAluJr
CAediting_783067chr10_112681150_+SINEAluAluJr
CAediting_783068chr10_112681199_+SINEAluAluJr
CAediting_783069chr10_112681207_+SINEAluAluJr
CAediting_783070chr10_112681208_+SINEAluAluJr
CAediting_783071chr10_112681221_+SINEAluAluJr
CAediting_783072chr10_112681223_+SINEAluAluJr
CAediting_783073chr10_112681242_+SINEAluAluJr
CAediting_783074chr10_112681246_+SINEAluAluJr
CAediting_783075chr10_112681247_+SINEAluAluJr
CAediting_783076chr10_112681253_+SINEAluAluJr
CAediting_783077chr10_112681264_+SINEAluAluJr
CAediting_783078chr10_112681283_+SINEAluAluJr
CAediting_783079chr10_112681301_+SINEAluAluJr
CAediting_783080chr10_112681315_+SINEAluAluJr
CAediting_783081chr10_112681316_+SINEAluAluJr
CAediting_783082chr10_112681319_+SINEAluAluJr
CAediting_783083chr10_112681333_+SINEAluAluJr
CAediting_783084chr10_112683922_+SINEAluAluSq
CAediting_783085chr10_112683923_+SINEAluAluSq
CAediting_783086chr10_112683988_+SINEAluAluSq
CAediting_783087chr10_112688661_+SINEAluAluSq
CAediting_783088chr10_112688722_+SINEAluAluSq
CAediting_783089chr10_112688759_+SINEAluAluSq
CAediting_783090chr10_112688782_+SINEAluAluSq
CAediting_783091chr10_112691066_+SINEAluAluSz6
CAediting_783092chr10_112691186_+SINEAluAluSz6
CAediting_783093chr10_112694913_+SINEAluAluSx1
CAediting_783094chr10_112697450_+SINEAluAluSp
CAediting_783095chr10_112699599_+SINEAluAluSg
CAediting_783096chr10_112699684_+SINEAluAluSg
CAediting_783097chr10_112699866_+SINEAluAluSg7
CAediting_783098chr10_112699992_+SINEAluAluSg7
CAediting_783099chr10_112699998_+SINEAluAluSg7
CAediting_783100chr10_112699999_+SINEAluAluSg7
CAediting_783101chr10_112700013_+SINEAluAluSg7
CAediting_783102chr10_112700043_+SINEAluAluSg7
CAediting_783103chr10_112700068_+SINEAluAluSg7
CAediting_783104chr10_112702443_+SINEAluAluSz6
CAediting_783105chr10_112702445_+SINEAluAluSz6
CAediting_783106chr10_112702463_+SINEAluAluSz6
CAediting_783107chr10_112702483_+SINEAluAluSz6
CAediting_783108chr10_112702494_+SINEAluAluSz6
CAediting_783109chr10_112702689_+SINEAluAluSz6
CAediting_783110chr10_112702783_+SINEAluAluSz6
CAediting_783111chr10_112702848_+SINEAluAluSz6
CAediting_783112chr10_112703321_+SINEAluAluSp
CAediting_783113chr10_112703384_+SINEAluAluSp
CAediting_783114chr10_112703403_+SINEAluAluSp
CAediting_783115chr10_112703456_+SINEAluAluSp
CAediting_783116chr10_112704952_+SINEAluAluJr
CAediting_783117chr10_112704988_+SINEAluAluJr
CAediting_783118chr10_112704989_+SINEAluAluJr
CAediting_783119chr10_112704990_+SINEAluAluJr
CAediting_783120chr10_112704992_+SINEAluAluJr
CAediting_783121chr10_112705014_+SINEAluAluJr
CAediting_783122chr10_112705041_+SINEAluAluJr
CAediting_783123chr10_112705138_+SINEAluAluJr
CAediting_783124chr10_112705184_+SINEAluAluJr
CAediting_783125chr10_112707180_+SINEAluAluJb
CAediting_783126chr10_112707181_+SINEAluAluJb
CAediting_783127chr10_112707183_+SINEAluAluJb
CAediting_783128chr10_112707294_+SINEAluAluJb
CAediting_783129chr10_112707354_+SINEAluAluSg
CAediting_783130chr10_112707355_+SINEAluAluSg
CAediting_783131chr10_112719686_+SINEAluAluSp
CAediting_783132chr10_112731340_+SINEAluAluSq
CAediting_783133chr10_112731341_+SINEAluAluSq
CAediting_783134chr10_112734782_+SINEAluAluSz6
CAediting_783135chr10_112734867_+SINEAluAluSz6
CAediting_783136chr10_112737196_+SINEAluAluSc
CAediting_783137chr10_112740435_+SINEAluAluSz
CAediting_783138chr10_112740507_+SINEAluAluSz
CAediting_783139chr10_112740878_+LINEL1L1MB7
CAediting_783140chr10_112740893_+LINEL1L1MB7
CAediting_783141chr10_112741032_+LINEL1L1MB7
CAediting_783142chr10_112741218_+SINEAluAluSz
CAediting_783143chr10_112741387_+SINEAluAluSz
CAediting_783144chr10_112741401_+SINEAluAluSz
CAediting_783145chr10_112741411_+SINEAluAluSz
CAediting_783146chr10_112750314_+SINEAluAluJr
CAediting_783147chr10_112750322_+SINEAluAluJr
CAediting_783148chr10_112755023_+SINEAluAluSz6
CAediting_783149chr10_112755054_+SINEAluAluSz6
CAediting_783150chr10_112755135_+SINEAluAluSz6
CAediting_783151chr10_112755238_+SINEAluAluSz6
CAediting_783153chr10_112756786_+SINEAluAluJb
CAediting_783154chr10_112756806_+SINEAluAluJb
CAediting_783155chr10_112756845_+SINEAluAluJb
CAediting_783156chr10_112756905_+SINEAluAluJb
CAediting_783157chr10_112756935_+SINEAluAluJb
CAediting_783158chr10_112756940_+SINEAluAluJb
CAediting_783159chr10_112756979_+SINEAluAluJb
CAediting_783160chr10_112757511_+SINEAluAluSz6
CAediting_783161chr10_112757550_+SINEAluAluSz6
CAediting_783163chr10_112760738_+SINEAluAluSg
CAediting_783164chr10_112760742_+SINEAluAluSg
CAediting_783165chr10_112776807_+SINEAluAluSx
CAediting_783166chr10_112777982_+SINEAluAluSp
CAediting_783167chr10_112778092_+SINEAluAluSp
CAediting_783168chr10_112778093_+SINEAluAluSp
CAediting_783169chr10_112778098_+SINEAluAluSp
CAediting_783170chr10_112780028_+SINEAluAluJr
CAediting_783171chr10_112780035_+SINEAluAluJr
CAediting_783172chr10_112780095_+SINEAluAluJr
CAediting_783173chr10_112780141_+SINEAluAluJr
CAediting_783174chr10_112780157_+SINEAluAluJr
CAediting_783175chr10_112780196_+SINEAluAluJr
CAediting_783176chr10_112780215_+SINEAluAluJr
CAediting_783177chr10_112780985_+SINEAluAluSx3
CAediting_783178chr10_112781780_+SINEAluAluSz
CAediting_783179chr10_112792155_+SINEAluAluSx3
CAediting_783180chr10_112795552_+SINEAluAluSx
CAediting_783181chr10_112795564_+SINEAluAluSx
CAediting_783182chr10_112796263_+SINEAluAluSx1
CAediting_783183chr10_112796279_+SINEAluAluSx1
CAediting_783184chr10_112796285_+SINEAluAluSx1
CAediting_783185chr10_112796286_+SINEAluAluSx1
CAediting_783186chr10_112796291_+SINEAluAluSx1
CAediting_783187chr10_112796295_+SINEAluAluSx1
CAediting_783188chr10_112796302_+SINEAluAluSx1
CAediting_783189chr10_112796308_+SINEAluAluSx1
CAediting_783190chr10_112796312_+SINEAluAluSx1
CAediting_783191chr10_112796321_+SINEAluAluSx1
CAediting_783192chr10_112796332_+SINEAluAluSx1
CAediting_783193chr10_112796334_+SINEAluAluSx1
CAediting_783194chr10_112796339_+SINEAluAluSx1
CAediting_783195chr10_112796351_+SINEAluAluSx1
CAediting_783196chr10_112796356_+SINEAluAluSx1
CAediting_783197chr10_112802042_+SINEAluAluJo
CAediting_783198chr10_112803632_+SINEAluAluJb
CAediting_783199chr10_112803645_+SINEAluAluJb
CAediting_783200chr10_112804912_+SINEAluAluJr
CAediting_783201chr10_112805000_+SINEAluAluJr
CAediting_783202chr10_112805001_+SINEAluAluJr
CAediting_783203chr10_112805002_+SINEAluAluJr
CAediting_783204chr10_112805086_+SINEAluAluJr
CAediting_783205chr10_112805100_+SINEAluAluJr
CAediting_783206chr10_112805101_+SINEAluAluJr
CAediting_783207chr10_112805118_+SINEAluAluJr
CAediting_783208chr10_112805720_+LTRERVL-MaLRMLT1C
CAediting_783209chr10_112805741_+LTRERVL-MaLRMLT1C
CAediting_783210chr10_112807337_+LTRERVL-MaLRMLT1C
CAediting_783211chr10_112807385_+LTRERVL-MaLRMLT1C
CAediting_783212chr10_112807393_+LTRERVL-MaLRMLT1C
CAediting_783213chr10_112807621_+SINEAluAluSq2
CAediting_783214chr10_112807634_+SINEAluAluSq2
CAediting_783215chr10_112807742_+SINEAluAluSq2
CAediting_783216chr10_112807954_+SINEAluAluJr
CAediting_783217chr10_112807979_+SINEAluAluJr
CAediting_783218chr10_112808016_+SINEAluAluJr
CAediting_783219chr10_112808036_+SINEAluAluJr
CAediting_783220chr10_112808075_+SINEAluAluJr
CAediting_783221chr10_112808089_+SINEAluAluJr
CAediting_783222chr10_112808097_+SINEAluAluJr
CAediting_783223chr10_112808144_+SINEAluAluJr
CAediting_783224chr10_112808151_+SINEAluAluJr
CAediting_783225chr10_112808163_+SINEAluAluJr
CAediting_783226chr10_112808170_+SINEAluAluJr
CAediting_783227chr10_112808178_+SINEAluAluJr
CAediting_783228chr10_112808206_+SINEAluAluJr
CAediting_783229chr10_112808504_+SINEAluAluSx
CAediting_783230chr10_112808505_+SINEAluAluSx
CAediting_783231chr10_112808510_+SINEAluAluSx
CAediting_783232chr10_112808514_+SINEAluAluSx
CAediting_783233chr10_112808518_+SINEAluAluSx
CAediting_783234chr10_112808531_+SINEAluAluSx
CAediting_783235chr10_112808537_+SINEAluAluSx
CAediting_783236chr10_112808540_+SINEAluAluSx
CAediting_783237chr10_112810227_+SINEAluAluSx1
CAediting_783238chr10_112810331_+SINEAluAluSx1
CAediting_783239chr10_112811537_+SINEAluAluYc
CAediting_783240chr10_112811563_+SINEAluAluYc
CAediting_783241chr10_112811580_+SINEAluAluYc
CAediting_783242chr10_112811586_+SINEAluAluYc
CAediting_783243chr10_112811612_+SINEAluAluYc
CAediting_783244chr10_112811629_+SINEAluAluYc
CAediting_783245chr10_112811634_+SINEAluAluYc
CAediting_783246chr10_112811654_+SINEAluAluYc
CAediting_783247chr10_112811668_+SINEAluAluYc

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RNA A-to-I editing events in the alternative splicing sites for VTI1A

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000151532.12.VTI1A.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000151532.12.VTI1A.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for VTI1A

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for VTI1A

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for VTI1A

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_783136chr10_112737196_+ENSG00000151532.12ENST00000432306hsa-miR-6771-5p1127371901127371967mer-m8112737177112737197158.00-31.39

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_783136chr10_112737196_+ENSG00000151532.12ENST00000432306hsa-miR-121261127371921127371998mer-1a112737176112737199147-12.83
CAediting_783136chr10_112737196_+ENSG00000151532.12ENST00000432306hsa-miR-1273h-5p1127371891127371968mer-1a112737176112737196155-22.13
CAediting_783136chr10_112737196_+ENSG00000151532.12ENST00000432306hsa-miR-30b-3p1127371891127371968mer-1a112737175112737196151-15.38
CAediting_783136chr10_112737196_+ENSG00000151532.12ENST00000432306hsa-miR-3689a-3p1127371891127371968mer-1a112737176112737196147-16.94
CAediting_783136chr10_112737196_+ENSG00000151532.12ENST00000432306hsa-miR-3689b-3p1127371891127371968mer-1a112737176112737196147-16.53
CAediting_783136chr10_112737196_+ENSG00000151532.12ENST00000432306hsa-miR-3689c1127371891127371968mer-1a112737176112737196147-16.53
CAediting_783136chr10_112737196_+ENSG00000151532.12ENST00000432306hsa-miR-6779-5p1127371891127371968mer-1a112737178112737196148-21.46
CAediting_783136chr10_112737196_+ENSG00000151532.12ENST00000432306hsa-miR-6780a-5p1127371891127371968mer-1a112737173112737196148-21.95
CAediting_783136chr10_112737196_+ENSG00000151532.12ENST00000432306hsa-miR-887-5p1127371901127371967mer-m8112737178112737197143-18.77

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_688081chr9_63819627_+ENSG00000151532.12ENST00000393077hsa-miR-4477b1128164011128164077mer-m8112816383112816408151-14.8
CAediting_1054808chr15_66496985_-ENSG00000151532.12ENST00000393077hsa-miR-45121128154731128154808mer-1a112815457112815480149-19.08
CAediting_1229413chr17_67471544_+ENSG00000151532.12ENST00000393077hsa-miR-548aa1128155641128155707mer-m8112815548112815571153-15.78
CAediting_604450chr7_133034877_-ENSG00000151532.12ENST00000393077hsa-miR-36541128158411128158488mer-1a112815830112815848143-17.11
CAediting_77128chr1_85133844_+ENSG00000151532.12ENST00000432306hsa-miR-4423-3p1127373271127373348mer-1a112737314112737334140-13.68
CAediting_604450chr7_133034877_-ENSG00000151532.12ENST00000432306hsa-miR-36541127375941127376007mer-m8112737582112737601146-16.08

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_393chr1_1167164_+ENSG00000151532.12ENST00000393077hsa-miR-200b-3p1128184951128185017mer-m8112818481112818502145-12.36
CAediting_393chr1_1167164_+ENSG00000151532.12ENST00000393077hsa-miR-200b-3p1128160271128160337mer-m8112816013112816034141-9.32
CAediting_1524209chrX_134546392_-ENSG00000151532.12ENST00000393077hsa-miR-503-5p1128185281128185336mer112818510112818534144-24.6
CAediting_1229413chr17_67471544_+ENSG00000151532.12ENST00000393077hsa-miR-548aa1128164591128164646mer112816438112816464141-12.63
CAediting_524911chr7_5495852_-ENSG00000151532.12ENST00000393077hsa-miR-589-3p1128154201128154278mer-1a112815404112815427148-14.01
CAediting_573001chr7_92204086_-ENSG00000151532.12ENST00000432306hsa-miR-1285-5p1127368691127368757mer-m8112736854112736876153-13.73
CAediting_980496chr14_31014685_-ENSG00000151532.12ENST00000432306hsa-miR-624-3p1127373121127373187mer-m8112737299112737319145-14.14

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for VTI1A

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for VTI1A

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
OVCAediting_782983chr10_112449595_+0.0004858080774243220.2670321849335....
BRCACAediting_782987chr10_112449632_+0.001263291445683890.318004404915123....
LUSCCAediting_782987chr10_112449632_+0.01329367400454670.208803813827373....
STADCAediting_782987chr10_112449632_+0.01275782594013520.253338892435633....
OVCAediting_782987chr10_112449632_+4.83543320692346e-070.332270145500393....
STADCAediting_782990chr10_112449646_+0.009585647191957720.282795888520679....
OVCAediting_782990chr10_112449646_+4.11677609325011e-050.271572236796038....
OVCAediting_782992chr10_112449673_+0.01657996191072090.222072800840497....
OVCAediting_782993chr10_112449674_+0.0002572054921529010.265674487903762....
LUSCCAediting_783001chr10_112449956_+....0.0009889177373395260.42480473766712
OVCAediting_783001chr10_112449956_+0.01575892102026770.177306953551132....
BRCACAediting_783003chr10_112449969_+0.0001048426826166680.364577245086257....
UCECCAediting_783003chr10_112449969_+0.03375701306281920.276881756804778....
LGGCAediting_783007chr10_112450010_+0.0111941545902130.219334548055268....
BRCACAediting_783007chr10_112450010_+1.10037746148205e-050.346084651530124....
CESCCAediting_783007chr10_112450010_+0.00186098386518980.325399730332207....
LUADCAediting_783007chr10_112450010_+0.01889354111833420.258791479673504....
LUSCCAediting_783007chr10_112450010_+0.0001379497492823920.324594635160437....
HNSCCAediting_783007chr10_112450010_+0.01370594912263310.243377314015081....
STADCAediting_783007chr10_112450010_+0.02334051808944340.314118424196415....
UCECCAediting_783007chr10_112450010_+1.08960411138695e-070.644611849002876....
OVCAediting_783007chr10_112450010_+4.39989767451241e-100.402279197409167....
SKCMCAediting_783007chr10_112450010_+0.003237057109327960.29755921037873....
LUSCCAediting_783012chr10_112450101_+0.01665224311213850.337152691979678..0.002231740580381160.422629955177014
OVCAediting_783016chr10_112450130_+1.32066750854239e-060.362035274323779....
ESCACAediting_783020chr10_112450154_+..0.0102460529666690.318789030899968..
OVCAediting_783020chr10_112450154_+0.0001737463118862890.242537518487422....

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Relation with cancer stages for VTI1A

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.
BRCApathologic_stageCAediting_783001chr10_112449956_+0.03180383566090820.270826121020102
THCApathologic_stageCAediting_783007chr10_112450010_+0.04075134948271620.160454048931188

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Relation with survival for VTI1A

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR
HNSCCAediting_783003chr10_112449969_+0.02871256373232970.0358834502.785
OVCAediting_782990chr10_112449646_+0.03127616128989770.003349794.54413

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RelatedDrugs for VTI1A

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for VTI1A

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource
VTI1AC0001418Adenocarcinoma1CTD_human
VTI1AC0009402Colorectal Carcinoma1CTD_human
VTI1AC0009404Colorectal Neoplasms1CTD_human
VTI1AC0205641Adenocarcinoma, Basal Cell1CTD_human
VTI1AC0205642Adenocarcinoma, Oxyphilic1CTD_human
VTI1AC0205643Carcinoma, Cribriform1CTD_human
VTI1AC0205644Carcinoma, Granular Cell1CTD_human
VTI1AC0205645Adenocarcinoma, Tubular1CTD_human