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Editing gene: C6orf141 (CAeditome ID:135398)

Gene summary for C6orf141

Gene summary

Gene information	Gene symbol	C6orf141
	Gene ID	135398
	Gene name	chromosome 6 open reading frame 141
	Synonyms	-
	Cytomap	6p12.3
	Type of gene	protein-coding
	Description	uncharacterized protein C6orf141
	Modification date	20210518
	UniProtAcc	Q5SZD1
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for C6orf141

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000197261.10

RNA A-to-I editing events in Cancer.

CAediting_486288(49552982, +), CAediting_486289(49552988, +), CAediting_486290(49553018, +), CAediting_486291(49553061, +), CAediting_486292(49553192, +), CAediting_486293(49555572, +), CAediting_486294(49555638, +), CAediting_486295(49555648, +), CAediting_486296(49555650, +), CAediting_486297(49555690, +), CAediting_486298(49555715, +), CAediting_486299(49555844, +), CAediting_486300(49555869, +), CAediting_486301(49556976, +), CAediting_486302(49556977, +), CAediting_486303(49556980, +), CAediting_486304(49556990, +), CAediting_486305(49556998, +), CAediting_486306(49556999, +), CAediting_486307(49557004, +), CAediting_486308(49557020, +), CAediting_486309(49557022, +), CAediting_486310(49557039, +), CAediting_486311(49557044, +), CAediting_486312(49557052, +), CAediting_486313(49557053, +), CAediting_486314(49557067, +), CAediting_486315(49557068, +), CAediting_486316(49557077, +), CAediting_486317(49557078, +), CAediting_486318(49557083, +), CAediting_486319(49557089, +), CAediting_486320(49557092, +), CAediting_486321(49557093, +), CAediting_486322(49557094, +), CAediting_486323(49557095, +), CAediting_486324(49557096, +), CAediting_486325(49557098, +), CAediting_486326(49557106, +), CAediting_486327(49557129, +), CAediting_486328(49557132, +), CAediting_486329(49557137, +), CAediting_486330(49557141, +), CAediting_486331(49557154, +), CAediting_486332(49557158, +), CAediting_486333(49557167, +), CAediting_486334(49557172, +), CAediting_486335(49557173, +), CAediting_486336(49557177, +), CAediting_486337(49557248, +), CAediting_486338(49557913, +), CAediting_486339(49557947, +), CAediting_486340(49557955, +), CAediting_486341(49557956, +), CAediting_486342(49557972, +), CAediting_486343(49557991, +), CAediting_486344(49557996, +), CAediting_486345(49558009, +), CAediting_486346(49558026, +), CAediting_486347(49558089, +), CAediting_486348(49558124, +), CAediting_486349(49558125, +), CAediting_486350(49558165, +), CAediting_486351(49558176, +), CAediting_486352(49558763, +), CAediting_486353(49558769, +), CAediting_486354(49558772, +), CAediting_486355(49558788, +), CAediting_486356(49558837, +), CAediting_486357(49558847, +), CAediting_486358(49558889, +), CAediting_486359(49558906, +), CAediting_486360(49558914, +), CAediting_486361(49558918, +), CAediting_486362(49558967, +), CAediting_486363(49558968, +), CAediting_486364(49558969, +), CAediting_486365(49558981, +), CAediting_486366(49559003, +), CAediting_486367(49560050, +), CAediting_486368(49560058, +), CAediting_486369(49560059, +), CAediting_486370(49560094, +), CAediting_486371(49560099, +), CAediting_486372(49560113, +), CAediting_486373(49560114, +), CAediting_486374(49560115, +), CAediting_486375(49560127, +), CAediting_486376(49560128, +), CAediting_486377(49560138, +), CAediting_486378(49560149, +), CAediting_486379(49560152, +), CAediting_486380(49560153, +), CAediting_486381(49560154, +), CAediting_486382(49560163, +), CAediting_486383(49560168, +), CAediting_486384(49560172, +), CAediting_486385(49560188, +), CAediting_486386(49560194, +), CAediting_486387(49560195, +), CAediting_486388(49560200, +), CAediting_486389(49560204, +), CAediting_486390(49560217, +), CAediting_486391(49560224, +), CAediting_486392(49560227, +), CAediting_486393(49560229, +), CAediting_486394(49560240, +), CAediting_486395(49560247, +), CAediting_486396(49560256, +), CAediting_486397(49560260, +), CAediting_486398(49560267, +), CAediting_486399(49560556, +), CAediting_486400(49560570, +), CAediting_486401(49560575, +), CAediting_486402(49560581, +), CAediting_486403(49560602, +), CAediting_486404(49560606, +), CAediting_486405(49560619, +), CAediting_486406(49560631, +), CAediting_486407(49560643, +), CAediting_486408(49560654, +), CAediting_486409(49560663, +), CAediting_486410(49560667, +), CAediting_486411(49560668, +), CAediting_486412(49560682, +), CAediting_486413(49560685, +), CAediting_486414(49560711, +), CAediting_486415(49560724, +), CAediting_486416(49560736, +), CAediting_486417(49560741, +), CAediting_486418(49560754, +), CAediting_486419(49560763, +), CAediting_486420(49560776, +), CAediting_486421(49561117, +), CAediting_486422(49561121, +), CAediting_486423(49561159, +), CAediting_486424(49561167, +), CAediting_486425(49561223, +), CAediting_486426(49561227, +), CAediting_486427(49561237, +), CAediting_486428(49561263, +), CAediting_486429(49561264, +), CAediting_486430(49561278, +), CAediting_486431(49561333, +), CAediting_486432(49561379, +), CAediting_486433(49561724, +), CAediting_486434(49561736, +), CAediting_486435(49561764, +), CAediting_486436(49561789, +), CAediting_486437(49561802, +), CAediting_486438(49561814, +), CAediting_486439(49561826, +), CAediting_486440(49561830, +),

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RNA editing positional annotations for C6orf141 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_486288	chr6_49552982_+	ncRNA_exonic
CAediting_486289	chr6_49552988_+	ncRNA_exonic
CAediting_486290	chr6_49553018_+	ncRNA_exonic
CAediting_486291	chr6_49553061_+	ncRNA_exonic
CAediting_486292	chr6_49553192_+	ncRNA_exonic
CAediting_486293	chr6_49555572_+	intronic
CAediting_486294	chr6_49555638_+	intronic
CAediting_486295	chr6_49555648_+	intronic
CAediting_486296	chr6_49555650_+	intronic
CAediting_486297	chr6_49555690_+	intronic
CAediting_486298	chr6_49555715_+	intronic
CAediting_486299	chr6_49555844_+	intronic
CAediting_486300	chr6_49555869_+	intronic
CAediting_486301	chr6_49556976_+	intronic
CAediting_486302	chr6_49556977_+	intronic
CAediting_486303	chr6_49556980_+	intronic
CAediting_486304	chr6_49556990_+	intronic
CAediting_486305	chr6_49556998_+	intronic
CAediting_486306	chr6_49556999_+	intronic
CAediting_486307	chr6_49557004_+	intronic
CAediting_486308	chr6_49557020_+	intronic
CAediting_486309	chr6_49557022_+	intronic
CAediting_486310	chr6_49557039_+	intronic
CAediting_486311	chr6_49557044_+	intronic
CAediting_486312	chr6_49557052_+	intronic
CAediting_486313	chr6_49557053_+	intronic
CAediting_486314	chr6_49557067_+	intronic
CAediting_486315	chr6_49557068_+	intronic
CAediting_486316	chr6_49557077_+	intronic
CAediting_486317	chr6_49557078_+	intronic
CAediting_486318	chr6_49557083_+	intronic
CAediting_486319	chr6_49557089_+	intronic
CAediting_486320	chr6_49557092_+	intronic
CAediting_486321	chr6_49557093_+	intronic
CAediting_486322	chr6_49557094_+	intronic
CAediting_486323	chr6_49557095_+	intronic
CAediting_486324	chr6_49557096_+	intronic
CAediting_486325	chr6_49557098_+	intronic
CAediting_486326	chr6_49557106_+	intronic
CAediting_486327	chr6_49557129_+	intronic
CAediting_486328	chr6_49557132_+	intronic
CAediting_486329	chr6_49557137_+	intronic
CAediting_486330	chr6_49557141_+	intronic
CAediting_486331	chr6_49557154_+	intronic
CAediting_486332	chr6_49557158_+	intronic
CAediting_486333	chr6_49557167_+	intronic
CAediting_486334	chr6_49557172_+	intronic
CAediting_486335	chr6_49557173_+	intronic
CAediting_486336	chr6_49557177_+	intronic
CAediting_486337	chr6_49557248_+	intronic
CAediting_486338	chr6_49557913_+	intronic
CAediting_486339	chr6_49557947_+	intronic
CAediting_486340	chr6_49557955_+	intronic
CAediting_486341	chr6_49557956_+	intronic
CAediting_486342	chr6_49557972_+	intronic
CAediting_486343	chr6_49557991_+	intronic
CAediting_486344	chr6_49557996_+	intronic
CAediting_486345	chr6_49558009_+	intronic
CAediting_486346	chr6_49558026_+	intronic
CAediting_486347	chr6_49558089_+	intronic
CAediting_486348	chr6_49558124_+	intronic
CAediting_486349	chr6_49558125_+	intronic
CAediting_486350	chr6_49558165_+	intronic
CAediting_486351	chr6_49558176_+	intronic
CAediting_486352	chr6_49558763_+	intronic
CAediting_486353	chr6_49558769_+	intronic
CAediting_486354	chr6_49558772_+	intronic
CAediting_486355	chr6_49558788_+	intronic
CAediting_486356	chr6_49558837_+	intronic
CAediting_486357	chr6_49558847_+	intronic
CAediting_486358	chr6_49558889_+	intronic
CAediting_486359	chr6_49558906_+	intronic
CAediting_486360	chr6_49558914_+	intronic
CAediting_486361	chr6_49558918_+	intronic
CAediting_486362	chr6_49558967_+	intronic
CAediting_486363	chr6_49558968_+	intronic
CAediting_486364	chr6_49558969_+	intronic
CAediting_486365	chr6_49558981_+	intronic
CAediting_486366	chr6_49559003_+	intronic
CAediting_486367	chr6_49560050_+	intronic
CAediting_486368	chr6_49560058_+	intronic
CAediting_486369	chr6_49560059_+	intronic
CAediting_486370	chr6_49560094_+	intronic
CAediting_486371	chr6_49560099_+	intronic
CAediting_486372	chr6_49560113_+	intronic
CAediting_486373	chr6_49560114_+	intronic
CAediting_486374	chr6_49560115_+	intronic
CAediting_486375	chr6_49560127_+	intronic
CAediting_486376	chr6_49560128_+	intronic
CAediting_486377	chr6_49560138_+	intronic
CAediting_486378	chr6_49560149_+	intronic
CAediting_486379	chr6_49560152_+	intronic
CAediting_486380	chr6_49560153_+	intronic
CAediting_486381	chr6_49560154_+	intronic
CAediting_486382	chr6_49560163_+	intronic
CAediting_486383	chr6_49560168_+	intronic
CAediting_486384	chr6_49560172_+	intronic
CAediting_486385	chr6_49560188_+	intronic
CAediting_486386	chr6_49560194_+	intronic
CAediting_486387	chr6_49560195_+	intronic
CAediting_486388	chr6_49560200_+	intronic
CAediting_486389	chr6_49560204_+	intronic
CAediting_486390	chr6_49560217_+	intronic
CAediting_486391	chr6_49560224_+	intronic
CAediting_486392	chr6_49560227_+	intronic
CAediting_486393	chr6_49560229_+	intronic
CAediting_486394	chr6_49560240_+	intronic
CAediting_486395	chr6_49560247_+	intronic
CAediting_486396	chr6_49560256_+	intronic
CAediting_486397	chr6_49560260_+	intronic
CAediting_486398	chr6_49560267_+	intronic
CAediting_486399	chr6_49560556_+	UTR3
CAediting_486400	chr6_49560570_+	UTR3
CAediting_486401	chr6_49560575_+	UTR3
CAediting_486402	chr6_49560581_+	UTR3
CAediting_486403	chr6_49560602_+	UTR3
CAediting_486404	chr6_49560606_+	UTR3
CAediting_486405	chr6_49560619_+	UTR3
CAediting_486406	chr6_49560631_+	UTR3
CAediting_486407	chr6_49560643_+	UTR3
CAediting_486408	chr6_49560654_+	UTR3
CAediting_486409	chr6_49560663_+	UTR3
CAediting_486410	chr6_49560667_+	UTR3
CAediting_486411	chr6_49560668_+	UTR3
CAediting_486412	chr6_49560682_+	UTR3
CAediting_486413	chr6_49560685_+	UTR3
CAediting_486414	chr6_49560711_+	UTR3
CAediting_486415	chr6_49560724_+	UTR3
CAediting_486416	chr6_49560736_+	UTR3
CAediting_486417	chr6_49560741_+	UTR3
CAediting_486418	chr6_49560754_+	UTR3
CAediting_486419	chr6_49560763_+	UTR3
CAediting_486420	chr6_49560776_+	UTR3
CAediting_486421	chr6_49561117_+	intronic
CAediting_486422	chr6_49561121_+	intronic
CAediting_486423	chr6_49561159_+	intronic
CAediting_486424	chr6_49561167_+	intronic
CAediting_486425	chr6_49561223_+	intronic
CAediting_486426	chr6_49561227_+	intronic
CAediting_486427	chr6_49561237_+	intronic
CAediting_486428	chr6_49561263_+	intronic
CAediting_486429	chr6_49561264_+	intronic
CAediting_486430	chr6_49561278_+	intronic
CAediting_486431	chr6_49561333_+	intronic
CAediting_486432	chr6_49561379_+	intronic
CAediting_486433	chr6_49561724_+	UTR3
CAediting_486434	chr6_49561736_+	UTR3
CAediting_486435	chr6_49561764_+	UTR3
CAediting_486436	chr6_49561789_+	UTR3
CAediting_486437	chr6_49561802_+	UTR3
CAediting_486438	chr6_49561814_+	UTR3
CAediting_486439	chr6_49561826_+	UTR3
CAediting_486440	chr6_49561830_+	UTR3

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_486288	chr6_49552982_+	SINE	Alu	AluSp
CAediting_486289	chr6_49552988_+	SINE	Alu	AluSp
CAediting_486290	chr6_49553018_+	SINE	Alu	AluSp
CAediting_486291	chr6_49553061_+	SINE	Alu	AluSp
CAediting_486292	chr6_49553192_+	SINE	Alu	AluSp
CAediting_486293	chr6_49555572_+	SINE	Alu	AluY
CAediting_486294	chr6_49555638_+	SINE	Alu	AluY
CAediting_486295	chr6_49555648_+	SINE	Alu	AluY
CAediting_486296	chr6_49555650_+	SINE	Alu	AluY
CAediting_486297	chr6_49555690_+	SINE	Alu	AluY
CAediting_486298	chr6_49555715_+	SINE	Alu	AluY
CAediting_486299	chr6_49555844_+	SINE	Alu	FLAM_C
CAediting_486300	chr6_49555869_+	SINE	Alu	FLAM_C
CAediting_486301	chr6_49556976_+	SINE	Alu	AluSp
CAediting_486302	chr6_49556977_+	SINE	Alu	AluSp
CAediting_486303	chr6_49556980_+	SINE	Alu	AluSp
CAediting_486304	chr6_49556990_+	SINE	Alu	AluSp
CAediting_486305	chr6_49556998_+	SINE	Alu	AluSp
CAediting_486306	chr6_49556999_+	SINE	Alu	AluSp
CAediting_486307	chr6_49557004_+	SINE	Alu	AluSp
CAediting_486308	chr6_49557020_+	SINE	Alu	AluSp
CAediting_486309	chr6_49557022_+	SINE	Alu	AluSp
CAediting_486310	chr6_49557039_+	SINE	Alu	AluSp
CAediting_486311	chr6_49557044_+	SINE	Alu	AluSp
CAediting_486312	chr6_49557052_+	SINE	Alu	AluSp
CAediting_486313	chr6_49557053_+	SINE	Alu	AluSp
CAediting_486314	chr6_49557067_+	SINE	Alu	AluSp
CAediting_486315	chr6_49557068_+	SINE	Alu	AluSp
CAediting_486316	chr6_49557077_+	SINE	Alu	AluSp
CAediting_486317	chr6_49557078_+	SINE	Alu	AluSp
CAediting_486318	chr6_49557083_+	SINE	Alu	AluSp
CAediting_486319	chr6_49557089_+	SINE	Alu	AluSp
CAediting_486320	chr6_49557092_+	SINE	Alu	AluSp
CAediting_486321	chr6_49557093_+	SINE	Alu	AluSp
CAediting_486322	chr6_49557094_+	SINE	Alu	AluSp
CAediting_486323	chr6_49557095_+	SINE	Alu	AluSp
CAediting_486324	chr6_49557096_+	SINE	Alu	AluSp
CAediting_486325	chr6_49557098_+	SINE	Alu	AluSp
CAediting_486326	chr6_49557106_+	SINE	Alu	AluSp
CAediting_486327	chr6_49557129_+	SINE	Alu	AluSp
CAediting_486328	chr6_49557132_+	SINE	Alu	AluSp
CAediting_486329	chr6_49557137_+	SINE	Alu	AluSp
CAediting_486330	chr6_49557141_+	SINE	Alu	AluSp
CAediting_486331	chr6_49557154_+	SINE	Alu	AluSp
CAediting_486332	chr6_49557158_+	SINE	Alu	AluSp
CAediting_486333	chr6_49557167_+	SINE	Alu	AluSp
CAediting_486334	chr6_49557172_+	SINE	Alu	AluSp
CAediting_486335	chr6_49557173_+	SINE	Alu	AluSp
CAediting_486336	chr6_49557177_+	SINE	Alu	AluSp
CAediting_486337	chr6_49557248_+	SINE	Alu	AluSp
CAediting_486338	chr6_49557913_+	SINE	Alu	AluSx3
CAediting_486339	chr6_49557947_+	SINE	Alu	AluSx3
CAediting_486340	chr6_49557955_+	SINE	Alu	AluSx3
CAediting_486341	chr6_49557956_+	SINE	Alu	AluSx3
CAediting_486342	chr6_49557972_+	SINE	Alu	AluSx3
CAediting_486343	chr6_49557991_+	SINE	Alu	AluSx3
CAediting_486344	chr6_49557996_+	SINE	Alu	AluSx3
CAediting_486345	chr6_49558009_+	SINE	Alu	AluSx3
CAediting_486346	chr6_49558026_+	SINE	Alu	AluSx3
CAediting_486347	chr6_49558089_+	SINE	Alu	AluSx3
CAediting_486348	chr6_49558124_+	SINE	Alu	AluSx3
CAediting_486349	chr6_49558125_+	SINE	Alu	AluSx3
CAediting_486350	chr6_49558165_+	SINE	Alu	AluSx3
CAediting_486351	chr6_49558176_+	SINE	Alu	AluSx3
CAediting_486352	chr6_49558763_+	SINE	Alu	AluY
CAediting_486353	chr6_49558769_+	SINE	Alu	AluY
CAediting_486354	chr6_49558772_+	SINE	Alu	AluY
CAediting_486355	chr6_49558788_+	SINE	Alu	AluY
CAediting_486356	chr6_49558837_+	SINE	Alu	AluY
CAediting_486357	chr6_49558847_+	SINE	Alu	AluY
CAediting_486358	chr6_49558889_+	SINE	Alu	AluY
CAediting_486359	chr6_49558906_+	SINE	Alu	AluY
CAediting_486360	chr6_49558914_+	SINE	Alu	AluY
CAediting_486361	chr6_49558918_+	SINE	Alu	AluY
CAediting_486362	chr6_49558967_+	SINE	Alu	AluY
CAediting_486363	chr6_49558968_+	SINE	Alu	AluY
CAediting_486364	chr6_49558969_+	SINE	Alu	AluY
CAediting_486365	chr6_49558981_+	SINE	Alu	AluY
CAediting_486366	chr6_49559003_+	SINE	Alu	AluY
CAediting_486367	chr6_49560050_+	SINE	Alu	AluSx
CAediting_486368	chr6_49560058_+	SINE	Alu	AluSx
CAediting_486369	chr6_49560059_+	SINE	Alu	AluSx
CAediting_486370	chr6_49560094_+	SINE	Alu	AluSx
CAediting_486371	chr6_49560099_+	SINE	Alu	AluSx
CAediting_486372	chr6_49560113_+	SINE	Alu	AluSx
CAediting_486373	chr6_49560114_+	SINE	Alu	AluSx
CAediting_486374	chr6_49560115_+	SINE	Alu	AluSx
CAediting_486375	chr6_49560127_+	SINE	Alu	AluSx
CAediting_486376	chr6_49560128_+	SINE	Alu	AluSx
CAediting_486377	chr6_49560138_+	SINE	Alu	AluSx
CAediting_486378	chr6_49560149_+	SINE	Alu	AluSx
CAediting_486379	chr6_49560152_+	SINE	Alu	AluSx
CAediting_486380	chr6_49560153_+	SINE	Alu	AluSx
CAediting_486381	chr6_49560154_+	SINE	Alu	AluSx
CAediting_486382	chr6_49560163_+	SINE	Alu	AluSx
CAediting_486383	chr6_49560168_+	SINE	Alu	AluSx
CAediting_486384	chr6_49560172_+	SINE	Alu	AluSx
CAediting_486385	chr6_49560188_+	SINE	Alu	AluSx
CAediting_486386	chr6_49560194_+	SINE	Alu	AluSx
CAediting_486387	chr6_49560195_+	SINE	Alu	AluSx
CAediting_486388	chr6_49560200_+	SINE	Alu	AluSx
CAediting_486389	chr6_49560204_+	SINE	Alu	AluSx
CAediting_486390	chr6_49560217_+	SINE	Alu	AluSx
CAediting_486391	chr6_49560224_+	SINE	Alu	AluSx
CAediting_486392	chr6_49560227_+	SINE	Alu	AluSx
CAediting_486393	chr6_49560229_+	SINE	Alu	AluSx
CAediting_486394	chr6_49560240_+	SINE	Alu	AluSx
CAediting_486395	chr6_49560247_+	SINE	Alu	AluSx
CAediting_486396	chr6_49560256_+	SINE	Alu	AluSx
CAediting_486397	chr6_49560260_+	SINE	Alu	AluSx
CAediting_486398	chr6_49560267_+	SINE	Alu	AluSx
CAediting_486399	chr6_49560556_+	SINE	Alu	AluSq2
CAediting_486400	chr6_49560570_+	SINE	Alu	AluSq2
CAediting_486401	chr6_49560575_+	SINE	Alu	AluSq2
CAediting_486402	chr6_49560581_+	SINE	Alu	AluSq2
CAediting_486403	chr6_49560602_+	SINE	Alu	AluSq2
CAediting_486404	chr6_49560606_+	SINE	Alu	AluSq2
CAediting_486405	chr6_49560619_+	SINE	Alu	AluSq2
CAediting_486406	chr6_49560631_+	SINE	Alu	AluSq2
CAediting_486407	chr6_49560643_+	SINE	Alu	AluSq2
CAediting_486408	chr6_49560654_+	SINE	Alu	AluSq2
CAediting_486409	chr6_49560663_+	SINE	Alu	AluSq2
CAediting_486410	chr6_49560667_+	SINE	Alu	AluSq2
CAediting_486411	chr6_49560668_+	SINE	Alu	AluSq2
CAediting_486412	chr6_49560682_+	SINE	Alu	AluSq2
CAediting_486413	chr6_49560685_+	SINE	Alu	AluSq2
CAediting_486414	chr6_49560711_+	SINE	Alu	AluSq2
CAediting_486415	chr6_49560724_+	SINE	Alu	AluSq2
CAediting_486416	chr6_49560736_+	SINE	Alu	AluSq2
CAediting_486417	chr6_49560741_+	SINE	Alu	AluSq2
CAediting_486418	chr6_49560754_+	SINE	Alu	AluSq2
CAediting_486419	chr6_49560763_+	SINE	Alu	AluSq2
CAediting_486420	chr6_49560776_+	SINE	Alu	AluSq2
CAediting_486421	chr6_49561117_+	SINE	Alu	AluSz6
CAediting_486422	chr6_49561121_+	SINE	Alu	AluSz6
CAediting_486423	chr6_49561159_+	SINE	Alu	AluSz6
CAediting_486424	chr6_49561167_+	SINE	Alu	AluSz6
CAediting_486425	chr6_49561223_+	SINE	Alu	AluSz6
CAediting_486426	chr6_49561227_+	SINE	Alu	AluSz6
CAediting_486427	chr6_49561237_+	SINE	Alu	AluSz6
CAediting_486428	chr6_49561263_+	SINE	Alu	AluSz6
CAediting_486429	chr6_49561264_+	SINE	Alu	AluSz6
CAediting_486430	chr6_49561278_+	SINE	Alu	AluSz6
CAediting_486431	chr6_49561333_+	SINE	Alu	AluSz6
CAediting_486432	chr6_49561379_+	SINE	Alu	AluSz6
CAediting_486433	chr6_49561724_+	SINE	Alu	AluJo
CAediting_486434	chr6_49561736_+	SINE	Alu	AluJo
CAediting_486435	chr6_49561764_+	SINE	Alu	AluJo
CAediting_486436	chr6_49561789_+	SINE	Alu	AluJo
CAediting_486437	chr6_49561802_+	SINE	Alu	AluJo
CAediting_486438	chr6_49561814_+	SINE	Alu	AluJo
CAediting_486439	chr6_49561826_+	SINE	Alu	AluJo
CAediting_486440	chr6_49561830_+	SINE	Alu	AluJo

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RNA A-to-I editing events in the alternative splicing sites for C6orf141

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000197261.10.C6orf141.

Correlation between RNA A-to-I editing and PSI for ENSG00000197261.10.C6orf141.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for C6orf141

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for C6orf141

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for C6orf141

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_486292	chr6_49553192_+	ENSG00000197261.10	ENST00000371194	hsa-miR-3189-3p	49553186	49553192	7mer-m8	49553175	49553193	143.00	-22.20
CAediting_486292	chr6_49553192_+	ENSG00000197261.10	ENST00000371194	hsa-miR-6813-3p	49553187	49553193	7mer-m8	49553174	49553194	140.00	-11.59
CAediting_486404	chr6_49560606_+	ENSG00000197261.10	ENST00000414696	hsa-miR-4773	49560603	49560609	7mer-m8	49560586	49560610	143.00	-17.50
CAediting_486404	chr6_49560606_+	ENSG00000197261.10	ENST00000414696	hsa-miR-4773	49560603	49560609	7mer-m8	49560586	49560610	143.00	-17.50
CAediting_486290	chr6_49553018_+	ENSG00000197261.10	ENST00000371194	hsa-miR-1827	49553015	49553021	7mer-m8	49553006	49553022	153.00	-16.50
CAediting_486290	chr6_49553018_+	ENSG00000197261.10	ENST00000371194	hsa-miR-1910-3p	49553014	49553020	7mer-m8	49553001	49553021	149.00	-17.31
CAediting_486290	chr6_49553018_+	ENSG00000197261.10	ENST00000371194	hsa-miR-2467-3p	49553012	49553018	7mer-m8	49552997	49553019	143.00	-17.92
CAediting_486290	chr6_49553018_+	ENSG00000197261.10	ENST00000371194	hsa-miR-3612	49553016	49553023	8mer-1a	49553002	49553023	140.00	-17.70
CAediting_486290	chr6_49553018_+	ENSG00000197261.10	ENST00000371194	hsa-miR-4257	49553011	49553017	7mer-m8	49553001	49553018	144.00	-19.41
CAediting_486290	chr6_49553018_+	ENSG00000197261.10	ENST00000371194	hsa-miR-650	49553016	49553023	8mer-1a	49553003	49553023	149.00	-17.73
CAediting_486290	chr6_49553018_+	ENSG00000197261.10	ENST00000371194	hsa-miR-6511a-5p	49553014	49553020	7mer-m8	49552999	49553021	163.00	-18.72
CAediting_486290	chr6_49553018_+	ENSG00000197261.10	ENST00000371194	hsa-miR-6511a-5p	49553014	49553020	7mer-m8	49552999	49553021	163.00	-18.72
CAediting_486290	chr6_49553018_+	ENSG00000197261.10	ENST00000371194	hsa-miR-6511a-5p	49553014	49553020	7mer-m8	49552999	49553021	163.00	-18.72
CAediting_486290	chr6_49553018_+	ENSG00000197261.10	ENST00000371194	hsa-miR-6511a-5p	49553014	49553020	7mer-m8	49552999	49553021	163.00	-18.72
CAediting_486290	chr6_49553018_+	ENSG00000197261.10	ENST00000371194	hsa-miR-6808-5p	49553015	49553020	6mer	49552997	49553021	141.00	-26.28
CAediting_486290	chr6_49553018_+	ENSG00000197261.10	ENST00000371194	hsa-miR-6893-5p	49553015	49553020	6mer	49553000	49553021	145.00	-23.98
CAediting_486291	chr6_49553061_+	ENSG00000197261.10	ENST00000371194	hsa-miR-181a-2-3p	49553055	49553061	7mer-m8	49553040	49553062	145.00	-16.24
CAediting_486291	chr6_49553061_+	ENSG00000197261.10	ENST00000371194	hsa-miR-4252	49553056	49553062	7mer-m8	49553045	49553063	151.00	-19.78
CAediting_486291	chr6_49553061_+	ENSG00000197261.10	ENST00000371194	hsa-miR-4691-3p	49553058	49553064	7mer-m8	49553044	49553065	154.00	-25.80
CAediting_486402	chr6_49560581_+	ENSG00000197261.10	ENST00000414696	hsa-miR-17-3p	49560574	49560580	7mer-m8	49560559	49560581	155.00	-18.89
CAediting_486402	chr6_49560581_+	ENSG00000197261.10	ENST00000414696	hsa-miR-604	49560577	49560583	7mer-1a	49560563	49560583	140.00	-21.60
CAediting_486402	chr6_49560581_+	ENSG00000197261.10	ENST00000414696	hsa-miR-647	49560577	49560583	7mer-m8	49560564	49560584	157.00	-19.27
CAediting_486403	chr6_49560602_+	ENSG00000197261.10	ENST00000414696	hsa-miR-4293	49560598	49560605	8mer-1a	49560587	49560605	141.00	-13.01
CAediting_486403	chr6_49560602_+	ENSG00000197261.10	ENST00000414696	hsa-miR-4539	49560596	49560601	6mer	49560579	49560602	142.00	-21.91
CAediting_486406	chr6_49560631_+	ENSG00000197261.10	ENST00000414696	hsa-miR-4691-3p	49560628	49560634	7mer-m8	49560608	49560635	150.00	-26.36
CAediting_486408	chr6_49560654_+	ENSG00000197261.10	ENST00000414696	hsa-miR-1205	49560647	49560653	7mer-m8	49560634	49560654	148.00	-19.59
CAediting_486408	chr6_49560654_+	ENSG00000197261.10	ENST00000414696	hsa-miR-4474-3p	49560652	49560658	7mer-m8	49560640	49560659	153.00	-16.53
CAediting_486408	chr6_49560654_+	ENSG00000197261.10	ENST00000414696	hsa-miR-647	49560650	49560656	7mer-m8	49560637	49560657	152.00	-18.48
CAediting_486410	chr6_49560667_+	ENSG00000197261.10	ENST00000414696	hsa-miR-1207-3p	49560660	49560667	8mer-1a	49560650	49560667	140.00	-14.68
CAediting_486410	chr6_49560667_+	ENSG00000197261.10	ENST00000414696	hsa-miR-34a-3p	49560663	49560669	7mer-m8	49560649	49560670	140.00	-8.52
CAediting_486411	chr6_49560668_+	ENSG00000197261.10	ENST00000414696	hsa-miR-4661-5p	49560662	49560668	7mer-m8	49560646	49560669	155.00	-18.50
CAediting_486411	chr6_49560668_+	ENSG00000197261.10	ENST00000414696	hsa-miR-548ae-3p	49560666	49560672	7mer-m8	49560653	49560673	141.00	-10.48
CAediting_486411	chr6_49560668_+	ENSG00000197261.10	ENST00000414696	hsa-miR-548ae-3p	49560666	49560672	7mer-m8	49560653	49560673	141.00	-10.48
CAediting_486411	chr6_49560668_+	ENSG00000197261.10	ENST00000414696	hsa-miR-548ah-3p	49560666	49560672	7mer-m8	49560651	49560673	143.00	-10.48
CAediting_486411	chr6_49560668_+	ENSG00000197261.10	ENST00000414696	hsa-miR-548aj-3p	49560666	49560672	7mer-m8	49560653	49560673	141.00	-8.37
CAediting_486411	chr6_49560668_+	ENSG00000197261.10	ENST00000414696	hsa-miR-548aj-3p	49560666	49560672	7mer-m8	49560653	49560673	141.00	-8.37
CAediting_486411	chr6_49560668_+	ENSG00000197261.10	ENST00000414696	hsa-miR-548am-3p	49560666	49560672	7mer-m8	49560651	49560673	143.00	-10.48
CAediting_486411	chr6_49560668_+	ENSG00000197261.10	ENST00000414696	hsa-miR-548aq-3p	49560666	49560672	7mer-m8	49560652	49560673	141.00	-10.48
CAediting_486411	chr6_49560668_+	ENSG00000197261.10	ENST00000414696	hsa-miR-548j-3p	49560666	49560672	7mer-m8	49560653	49560673	141.00	-10.48
CAediting_486411	chr6_49560668_+	ENSG00000197261.10	ENST00000414696	hsa-miR-548x-3p	49560666	49560672	7mer-m8	49560654	49560673	141.00	-8.37
CAediting_486411	chr6_49560668_+	ENSG00000197261.10	ENST00000414696	hsa-miR-548x-3p	49560666	49560672	7mer-m8	49560654	49560673	141.00	-8.37
CAediting_486411	chr6_49560668_+	ENSG00000197261.10	ENST00000414696	hsa-miR-7844-5p	49560664	49560670	7mer-m8	49560650	49560671	163.00	-20.31
CAediting_486414	chr6_49560711_+	ENSG00000197261.10	ENST00000414696	hsa-miR-3940-3p	49560708	49560714	7mer-m8	49560697	49560715	144.00	-24.53
CAediting_486417	chr6_49560741_+	ENSG00000197261.10	ENST00000414696	hsa-miR-6502-3p	49560738	49560743	6mer	49560721	49560744	146.00	-22.80
CAediting_486419	chr6_49560763_+	ENSG00000197261.10	ENST00000414696	hsa-miR-326	49560758	49560764	7mer-m8	49560746	49560765	140.00	-13.96
CAediting_486419	chr6_49560763_+	ENSG00000197261.10	ENST00000414696	hsa-miR-330-5p	49560758	49560764	7mer-m8	49560742	49560765	143.00	-23.69
CAediting_486419	chr6_49560763_+	ENSG00000197261.10	ENST00000414696	hsa-miR-4314	49560757	49560763	7mer-m8	49560746	49560764	143.00	-24.03
CAediting_486419	chr6_49560763_+	ENSG00000197261.10	ENST00000414696	hsa-miR-514a-5p	49560759	49560765	7mer-m8	49560741	49560766	151.00	-19.73
CAediting_486419	chr6_49560763_+	ENSG00000197261.10	ENST00000414696	hsa-miR-514a-5p	49560759	49560765	7mer-m8	49560741	49560766	151.00	-19.73
CAediting_486419	chr6_49560763_+	ENSG00000197261.10	ENST00000414696	hsa-miR-514a-5p	49560759	49560765	7mer-m8	49560741	49560766	151.00	-19.73
CAediting_486420	chr6_49560776_+	ENSG00000197261.10	ENST00000414696	hsa-miR-106a-3p	49560772	49560777	6mer	49560757	49560778	141.00	-21.13
CAediting_486433	chr6_49561724_+	ENSG00000197261.10	ENST00000371194	hsa-miR-1285-3p	49561723	49561728	6mer	49561708	49561729	160.00	-30.08
CAediting_486433	chr6_49561724_+	ENSG00000197261.10	ENST00000371194	hsa-miR-1285-3p	49561723	49561728	6mer	49561708	49561729	160.00	-30.08
CAediting_486433	chr6_49561724_+	ENSG00000197261.10	ENST00000371194	hsa-miR-4486	49561722	49561728	7mer-m8	49561711	49561729	146.00	-21.27
CAediting_486434	chr6_49561736_+	ENSG00000197261.10	ENST00000371194	hsa-miR-508-5p	49561730	49561736	7mer-m8	49561715	49561737	150.00	-18.91
CAediting_486436	chr6_49561789_+	ENSG00000197261.10	ENST00000371194	hsa-miR-1255b-2-3p	49561783	49561789	7mer-m8	49561769	49561790	140.00	-10.34
CAediting_486436	chr6_49561789_+	ENSG00000197261.10	ENST00000371194	hsa-miR-4751	49561787	49561793	7mer-m8	49561772	49561794	148.00	-21.22
CAediting_486438	chr6_49561814_+	ENSG00000197261.10	ENST00000371194	hsa-miR-3614-5p	49561807	49561813	7mer-m8	49561790	49561814	146.00	-24.19
CAediting_486438	chr6_49561814_+	ENSG00000197261.10	ENST00000371194	hsa-miR-4691-3p	49561811	49561817	7mer-m8	49561792	49561818	156.00	-30.33

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_486417	chr6_49560741_+	ENSG00000197261.10	ENST00000414696	hsa-miR-1288-5p	49560738	49560744	7mer-m8	49560726	49560745	144	-17.2
CAediting_486399	chr6_49560556_+	ENSG00000197261.10	ENST00000414696	hsa-miR-25-3p	49560551	49560557	7mer-m8	49560535	49560558	153	-26.06
CAediting_486414	chr6_49560711_+	ENSG00000197261.10	ENST00000414696	hsa-miR-3190-5p	49560705	49560711	7mer-m8	49560693	49560712	146	-17.92
CAediting_486399	chr6_49560556_+	ENSG00000197261.10	ENST00000414696	hsa-miR-32-5p	49560551	49560557	7mer-m8	49560535	49560558	149	-13.51
CAediting_486416	chr6_49560736_+	ENSG00000197261.10	ENST00000414696	hsa-miR-3622a-3p	49560733	49560740	8mer-1a	49560719	49560740	144	-13.89
CAediting_486416	chr6_49560736_+	ENSG00000197261.10	ENST00000414696	hsa-miR-3622b-3p	49560733	49560740	8mer-1a	49560720	49560740	153	-19.35
CAediting_486399	chr6_49560556_+	ENSG00000197261.10	ENST00000414696	hsa-miR-363-3p	49560551	49560557	7mer-m8	49560537	49560558	147	-16.59
CAediting_486413	chr6_49560685_+	ENSG00000197261.10	ENST00000414696	hsa-miR-3675-3p	49560683	49560689	7mer-m8	49560669	49560690	145	-12.58
CAediting_486400	chr6_49560570_+	ENSG00000197261.10	ENST00000414696	hsa-miR-4330	49560564	49560570	7mer-m8	49560554	49560571	155	-18.91
CAediting_486418	chr6_49560754_+	ENSG00000197261.10	ENST00000414696	hsa-miR-4478	49560751	49560757	7mer-m8	49560743	49560758	149	-22.23
CAediting_486405	chr6_49560619_+	ENSG00000197261.10	ENST00000414696	hsa-miR-4478	49560616	49560622	7mer-m8	49560608	49560623	149	-25.05
CAediting_486405	chr6_49560619_+	ENSG00000197261.10	ENST00000414696	hsa-miR-4649-3p	49560613	49560619	7mer-m8	49560600	49560620	140	-14.11
CAediting_486418	chr6_49560754_+	ENSG00000197261.10	ENST00000414696	hsa-miR-485-5p	49560752	49560758	7mer-m8	49560737	49560759	145	-15.4
CAediting_486400	chr6_49560570_+	ENSG00000197261.10	ENST00000414696	hsa-miR-5100	49560563	49560569	7mer-m8	49560548	49560570	147	-21.48
CAediting_486414	chr6_49560711_+	ENSG00000197261.10	ENST00000414696	hsa-miR-548s	49560704	49560710	7mer-m8	49560689	49560711	152	-16
CAediting_486409	chr6_49560663_+	ENSG00000197261.10	ENST00000414696	hsa-miR-5589-5p	49560658	49560664	7mer-m8	49560645	49560665	153	-23.8
CAediting_486406	chr6_49560631_+	ENSG00000197261.10	ENST00000414696	hsa-miR-5690	49560628	49560634	7mer-m8	49560615	49560635	145	-17.72
CAediting_486402	chr6_49560581_+	ENSG00000197261.10	ENST00000414696	hsa-miR-6516-5p	49560574	49560580	7mer-m8	49560556	49560581	152	-17.4
CAediting_486407	chr6_49560643_+	ENSG00000197261.10	ENST00000414696	hsa-miR-6720-3p	49560641	49560647	7mer-m8	49560627	49560648	148	-18.9
CAediting_486405	chr6_49560619_+	ENSG00000197261.10	ENST00000414696	hsa-miR-6765-5p	49560613	49560618	6mer	49560596	49560619	140	-21.72
CAediting_486409	chr6_49560663_+	ENSG00000197261.10	ENST00000414696	hsa-miR-6776-5p	49560657	49560663	7mer-m8	49560646	49560664	149	-20.46
CAediting_486400	chr6_49560570_+	ENSG00000197261.10	ENST00000414696	hsa-miR-6854-5p	49560566	49560572	7mer-m8	49560550	49560573	150	-19.18
CAediting_486418	chr6_49560754_+	ENSG00000197261.10	ENST00000414696	hsa-miR-7160-5p	49560749	49560755	7mer-m8	49560738	49560756	150	-20.62
CAediting_486405	chr6_49560619_+	ENSG00000197261.10	ENST00000414696	hsa-miR-7160-5p	49560614	49560620	7mer-m8	49560601	49560621	146	-17.87
CAediting_486416	chr6_49560736_+	ENSG00000197261.10	ENST00000414696	hsa-miR-7162-3p	49560730	49560736	7mer-m8	49560720	49560737	145	-15.81
CAediting_486402	chr6_49560581_+	ENSG00000197261.10	ENST00000414696	hsa-miR-876-3p	49560579	49560585	7mer-m8	49560565	49560586	140	-14.07
CAediting_486419	chr6_49560763_+	ENSG00000197261.10	ENST00000414696	hsa-miR-887-5p	49560756	49560763	8mer-1a	49560744	49560763	143	-15.14
CAediting_486399	chr6_49560556_+	ENSG00000197261.10	ENST00000414696	hsa-miR-92a-3p	49560551	49560557	7mer-m8	49560541	49560558	155	-27.39
CAediting_486399	chr6_49560556_+	ENSG00000197261.10	ENST00000414696	hsa-miR-92a-3p	49560551	49560557	7mer-m8	49560541	49560558	155	-27.39
CAediting_486399	chr6_49560556_+	ENSG00000197261.10	ENST00000414696	hsa-miR-92b-3p	49560551	49560557	7mer-m8	49560541	49560558	155	-23.65
CAediting_486290	chr6_49553018_+	ENSG00000197261.10	ENST00000371194	hsa-miR-3927-3p	49553014	49553020	7mer-m8	49552999	49553021	155	-11.87
CAediting_486290	chr6_49553018_+	ENSG00000197261.10	ENST00000371194	hsa-miR-4451	49553013	49553019	7mer-m8	49553003	49553020	145	-14.83
CAediting_486290	chr6_49553018_+	ENSG00000197261.10	ENST00000371194	hsa-miR-4458	49553015	49553021	7mer-m8	49553004	49553022	150	-20.9
CAediting_486290	chr6_49553018_+	ENSG00000197261.10	ENST00000371194	hsa-miR-4500	49553015	49553021	7mer-m8	49553006	49553022	149	-13.04
CAediting_486291	chr6_49553061_+	ENSG00000197261.10	ENST00000371194	hsa-miR-5690	49553058	49553064	7mer-m8	49553045	49553065	145	-16.35
CAediting_486433	chr6_49561724_+	ENSG00000197261.10	ENST00000371194	hsa-miR-1262	49561721	49561727	7mer-m8	49561706	49561728	144	-15.28
CAediting_486439	chr6_49561826_+	ENSG00000197261.10	ENST00000371194	hsa-miR-1271-3p	49561825	49561831	7mer-1a	49561812	49561831	143	-19.21
CAediting_486440	chr6_49561830_+	ENSG00000197261.10	ENST00000371194	hsa-miR-1271-3p	49561825	49561831	7mer-1a	49561812	49561831	143	-19.21
CAediting_486435	chr6_49561764_+	ENSG00000197261.10	ENST00000371194	hsa-miR-17-3p	49561758	49561764	7mer-m8	49561743	49561765	151	-17.66
CAediting_486434	chr6_49561736_+	ENSG00000197261.10	ENST00000371194	hsa-miR-181a-5p	49561733	49561739	7mer-1a	49561719	49561739	142	-18.94
CAediting_486434	chr6_49561736_+	ENSG00000197261.10	ENST00000371194	hsa-miR-181a-5p	49561733	49561739	7mer-1a	49561719	49561739	142	-18.94
CAediting_486437	chr6_49561802_+	ENSG00000197261.10	ENST00000371194	hsa-miR-4478	49561799	49561805	7mer-m8	49561790	49561806	155	-27.09
CAediting_486437	chr6_49561802_+	ENSG00000197261.10	ENST00000371194	hsa-miR-485-5p	49561800	49561806	7mer-m8	49561785	49561807	149	-16.49
CAediting_486440	chr6_49561830_+	ENSG00000197261.10	ENST00000371194	hsa-miR-550b-2-5p	49561825	49561832	8mer-1a	49561811	49561832	144	-15.37
CAediting_486440	chr6_49561830_+	ENSG00000197261.10	ENST00000371194	hsa-miR-550b-2-5p	49561825	49561832	8mer-1a	49561811	49561832	144	-15.37
CAediting_486438	chr6_49561814_+	ENSG00000197261.10	ENST00000371194	hsa-miR-5690	49561811	49561817	7mer-m8	49561798	49561818	145	-16.74
CAediting_486440	chr6_49561830_+	ENSG00000197261.10	ENST00000371194	hsa-miR-581	49561828	49561833	6mer	49561815	49561834	144	-15.58
CAediting_486433	chr6_49561724_+	ENSG00000197261.10	ENST00000371194	hsa-miR-6736-5p	49561721	49561727	7mer-m8	49561708	49561728	143	-20.94
CAediting_486437	chr6_49561802_+	ENSG00000197261.10	ENST00000371194	hsa-miR-7160-5p	49561797	49561803	7mer-m8	49561784	49561804	150	-18.56
CAediting_486437	chr6_49561802_+	ENSG00000197261.10	ENST00000371194	hsa-miR-7162-3p	49561796	49561802	7mer-m8	49561785	49561803	152	-18.37

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_980496	chr14_31014685_-	ENSG00000197261.10	ENST00000414696	hsa-miR-624-3p	49554896	49554902	7mer-m8	49554883	49554903	150	-15.66
CAediting_688080	chr9_63819626_+	ENSG00000197261.10	ENST00000414696	hsa-miR-4477b	49554976	49554982	7mer-m8	49554962	49554983	147	-11.14
CAediting_980496	chr14_31014685_-	ENSG00000197261.10	ENST00000371194	hsa-miR-624-3p	49554896	49554902	7mer-m8	49554883	49554903	150	-15.66
CAediting_688080	chr9_63819626_+	ENSG00000197261.10	ENST00000371194	hsa-miR-4477b	49554976	49554982	7mer-m8	49554962	49554983	147	-11.14
CAediting_228905	chr2_188297554_+	ENSG00000197261.10	ENST00000414696	hsa-miR-561-3p	49560722	49560727	6mer	49560705	49560728	145	-16.26
CAediting_580943	chr7_100356700_+	ENSG00000197261.10	ENST00000414696	hsa-miR-6840-3p	49560590	49560596	7mer-m8	49560576	49560597	140	-25.28
CAediting_1229414	chr17_67471546_+	ENSG00000197261.10	ENST00000371194	hsa-miR-548aa	49553142	49553148	7mer-m8	49553125	49553149	140	-12.22
CAediting_468389	chr6_31355314_-	ENSG00000197261.10	ENST00000371194	hsa-miR-6891-5p	49553050	49553057	8mer-1a	49553038	49553057	152	-25.59

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for C6orf141

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000371194.6	nonsense_mediated_decay
ENST00000414696.4	nonsense_mediated_decay
ENST00000530382.1	retained_intron

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_486288	ENST00000371194.6	chr6_49552982_+	-682.80	-681.30	-701.40
CAediting_486289	ENST00000371194.6	chr6_49552988_+	-682.40	-681.30	-701.40
CAediting_486290	ENST00000371194.6	chr6_49553018_+	-685.00	-681.30	-701.40
CAediting_486291	ENST00000371194.6	chr6_49553061_+	-682.90	-681.30	-701.40
CAediting_486292	ENST00000371194.6	chr6_49553192_+	-681.30	-681.30	-701.40
CAediting_486433	ENST00000371194.6	chr6_49561724_+	-682.30	-681.30	-701.40
CAediting_486434	ENST00000371194.6	chr6_49561736_+	-682.50	-681.30	-701.40
CAediting_486435	ENST00000371194.6	chr6_49561764_+	-681.30	-681.30	-701.40
CAediting_486436	ENST00000371194.6	chr6_49561789_+	-684.50	-681.30	-701.40
CAediting_486437	ENST00000371194.6	chr6_49561802_+	-681.80	-681.30	-701.40
CAediting_486438	ENST00000371194.6	chr6_49561814_+	-685.60	-681.30	-701.40
CAediting_486439	ENST00000371194.6	chr6_49561826_+	-682.20	-681.30	-701.40
CAediting_486440	ENST00000371194.6	chr6_49561830_+	-682.10	-681.30	-701.40
CAediting_486399	ENST00000414696.4	chr6_49560556_+	-653.70	-651.50	-682.80
CAediting_486400	ENST00000414696.4	chr6_49560570_+	-654.40	-651.50	-682.80
CAediting_486401	ENST00000414696.4	chr6_49560575_+	-654.10	-651.50	-682.80
CAediting_486402	ENST00000414696.4	chr6_49560581_+	-652.30	-651.50	-682.80
CAediting_486403	ENST00000414696.4	chr6_49560602_+	-651.20	-651.50	-682.80
CAediting_486404	ENST00000414696.4	chr6_49560606_+	-651.50	-651.50	-682.80
CAediting_486405	ENST00000414696.4	chr6_49560619_+	-650.80	-651.50	-682.80
CAediting_486406	ENST00000414696.4	chr6_49560631_+	-654.00	-651.50	-682.80
CAediting_486407	ENST00000414696.4	chr6_49560643_+	-650.70	-651.50	-682.80
CAediting_486408	ENST00000414696.4	chr6_49560654_+	-651.50	-651.50	-682.80
CAediting_486409	ENST00000414696.4	chr6_49560663_+	-650.70	-651.50	-682.80
CAediting_486410	ENST00000414696.4	chr6_49560667_+	-652.30	-651.50	-682.80
CAediting_486411	ENST00000414696.4	chr6_49560668_+	-651.50	-651.50	-682.80
CAediting_486412	ENST00000414696.4	chr6_49560682_+	-650.70	-651.50	-682.80
CAediting_486413	ENST00000414696.4	chr6_49560685_+	-651.20	-651.50	-682.80
CAediting_486414	ENST00000414696.4	chr6_49560711_+	-650.80	-651.50	-682.80
CAediting_486415	ENST00000414696.4	chr6_49560724_+	-653.10	-651.50	-682.80
CAediting_486416	ENST00000414696.4	chr6_49560736_+	-651.70	-651.50	-682.80
CAediting_486417	ENST00000414696.4	chr6_49560741_+	-655.10	-651.50	-682.80
CAediting_486418	ENST00000414696.4	chr6_49560754_+	-651.80	-651.50	-682.80
CAediting_486419	ENST00000414696.4	chr6_49560763_+	-654.00	-651.50	-682.80
CAediting_486420	ENST00000414696.4	chr6_49560776_+	-655.50	-651.50	-682.80
CAediting_486288	ENST00000530382.1	chr6_49552982_+	-158.80	-157.40	-171.50
CAediting_486289	ENST00000530382.1	chr6_49552988_+	-158.50	-157.40	-171.50
CAediting_486290	ENST00000530382.1	chr6_49553018_+	-160.20	-157.40	-171.50
CAediting_486291	ENST00000530382.1	chr6_49553061_+	-161.50	-157.40	-171.50
CAediting_486292	ENST00000530382.1	chr6_49553192_+	-157.40	-157.40	-171.50

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Relation with ADAR for C6orf141

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
BRCA	CAediting_486340	chr6_49557955_+	0.00257023787465489	0.33678094312968	.	.	.	.

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Relation with cancer stages for C6orf141

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

Top

Relation with survival for C6orf141

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

Top

RelatedDrugs for C6orf141

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for C6orf141

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene