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Editing gene: COX7B (CAeditome ID:1349)

Gene summary for COX7B

Gene summary

Gene information	Gene symbol	COX7B
	Gene ID	1349
	Gene name	cytochrome c oxidase subunit 7B
	Synonyms	APLCC\|LSDMCA2
	Cytomap	Xq21.1
	Type of gene	protein-coding
	Description	cytochrome c oxidase subunit 7B, mitochondrialcytochrome c oxidase polypeptide VIIbcytochrome c oxidase subunit VIIbcytochrome-c oxidase chain VIIb
	Modification date	20210518
	UniProtAcc	P24311
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for COX7B

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000131174.4

RNA A-to-I editing events in Cancer.

CAediting_1514571(77900089, +), CAediting_1514572(77900111, +), CAediting_1514573(77900112, +), CAediting_1514574(77900117, +), CAediting_1514575(77900247, +), CAediting_1514576(77900274, +), CAediting_1514577(77900278, +), CAediting_1514578(77900288, +), CAediting_1514579(77901268, +), CAediting_1514580(77901269, +), CAediting_1514581(77901346, +), CAediting_1514582(77901746, +), CAediting_1514583(77901748, +), CAediting_1514584(77901753, +), CAediting_1514585(77901764, +), CAediting_1514586(77901768, +), CAediting_1514587(77901794, +), CAediting_1514588(77901799, +), CAediting_1514589(77901804, +), CAediting_1514590(77901824, +), CAediting_1514591(77901825, +), CAediting_1514592(77901840, +), CAediting_1514593(77901842, +), CAediting_1514594(77901854, +), CAediting_1514595(77901864, +), CAediting_1514596(77901919, +), CAediting_1514597(77901921, +), CAediting_1514598(77901923, +), CAediting_1514599(77901933, +), CAediting_1514600(77901947, +), CAediting_1514601(77901956, +), CAediting_1514602(77901957, +), CAediting_1514603(77901958, +), CAediting_1514604(77901970, +), CAediting_1514605(77901971, +), CAediting_1514606(77901983, +), CAediting_1514607(77901996, +), CAediting_1514608(77901998, +), CAediting_1514609(77902001, +), CAediting_1514610(77902010, +), CAediting_1514611(77902012, +), CAediting_1514612(77903125, +), CAediting_1514613(77903126, +), CAediting_1514614(77903259, +), CAediting_1514615(77903295, +), CAediting_1514616(77903320, +), CAediting_1514617(77903324, +), CAediting_1514618(77903333, +), CAediting_1514619(77903335, +), CAediting_1514620(77903349, +), CAediting_1514621(77903358, +), CAediting_1514622(77903368, +), CAediting_1514623(77903374, +), CAediting_1514624(77903377, +), CAediting_1514625(77903394, +), CAediting_1514626(77903428, +), CAediting_1514627(77903454, +), CAediting_1514628(77903455, +), CAediting_1514629(77903456, +), CAediting_1514630(77903462, +), CAediting_1514631(77903468, +), CAediting_1514632(77903470, +), CAediting_1514633(77903477, +), CAediting_1514634(77903490, +), CAediting_1514635(77903997, +), CAediting_1514636(77904007, +), CAediting_1514637(77904179, +), CAediting_1514638(77904192, +), CAediting_1514639(77904193, +), CAediting_1514640(77904194, +), CAediting_1514641(77904206, +), CAediting_1514642(77904209, +), CAediting_1514643(77904355, +), CAediting_1514644(77904356, +), CAediting_1514645(77904387, +), CAediting_1514646(77904395, +), CAediting_1514647(77904401, +), CAediting_1514648(77904404, +), CAediting_1514649(77904412, +), CAediting_1514650(77904431, +), CAediting_1514651(77904441, +), CAediting_1514652(77904455, +), CAediting_1514653(77904465, +), CAediting_1514654(77904466, +), CAediting_1514655(77904471, +), CAediting_1514656(77904481, +), CAediting_1514657(77904482, +), CAediting_1514658(77904483, +), CAediting_1514659(77904486, +), CAediting_1514660(77904489, +), CAediting_1514661(77904490, +), CAediting_1514662(77904491, +), CAediting_1514663(77904492, +), CAediting_1514664(77904495, +), CAediting_1514665(77904521, +), CAediting_1514666(77904527, +), CAediting_1514667(77904585, +), CAediting_1514668(77904589, +), CAediting_1514669(77904594, +), CAediting_1514670(77904596, +), CAediting_1514671(77904627, +), CAediting_1514672(77905560, +), CAediting_1514673(77905624, +), CAediting_1514674(77905632, +), CAediting_1514675(77905636, +), CAediting_1514676(77905789, +), CAediting_1514677(77905792, +), CAediting_1514678(77905794, +), CAediting_1514679(77905833, +), CAediting_1514680(77905850, +), CAediting_1514681(77905912, +), CAediting_1514682(77905913, +), CAediting_1514683(77905925, +), CAediting_1514684(77905974, +), CAediting_1514685(77905987, +), CAediting_1514686(77905994, +), CAediting_1514687(77906047, +), CAediting_1514688(77906053, +), CAediting_1514689(77906659, +), CAediting_1514690(77906727, +), CAediting_1514691(77906728, +), CAediting_1514692(77906767, +), CAediting_1514693(77906769, +), CAediting_1514694(77906828, +), CAediting_1514695(77906857, +), CAediting_1514696(77906875, +), CAediting_1514697(77906880, +), CAediting_1514698(77906888, +), CAediting_1514699(77906890, +), CAediting_1514700(77906896, +), CAediting_1514701(77906911, +),

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RNA editing positional annotations for COX7B using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1514571	chrX_77900089_+	ncRNA_intronic
CAediting_1514572	chrX_77900111_+	ncRNA_intronic
CAediting_1514573	chrX_77900112_+	ncRNA_intronic
CAediting_1514574	chrX_77900117_+	ncRNA_intronic
CAediting_1514575	chrX_77900247_+	ncRNA_intronic
CAediting_1514576	chrX_77900274_+	ncRNA_intronic
CAediting_1514577	chrX_77900278_+	ncRNA_intronic
CAediting_1514578	chrX_77900288_+	ncRNA_intronic
CAediting_1514579	chrX_77901268_+	ncRNA_intronic
CAediting_1514580	chrX_77901269_+	ncRNA_intronic
CAediting_1514581	chrX_77901346_+	ncRNA_intronic
CAediting_1514582	chrX_77901746_+	ncRNA_exonic
CAediting_1514583	chrX_77901748_+	ncRNA_exonic
CAediting_1514584	chrX_77901753_+	ncRNA_exonic
CAediting_1514585	chrX_77901764_+	ncRNA_exonic
CAediting_1514586	chrX_77901768_+	ncRNA_exonic
CAediting_1514587	chrX_77901794_+	ncRNA_exonic
CAediting_1514588	chrX_77901799_+	ncRNA_exonic
CAediting_1514589	chrX_77901804_+	ncRNA_exonic
CAediting_1514590	chrX_77901824_+	ncRNA_exonic
CAediting_1514591	chrX_77901825_+	ncRNA_exonic
CAediting_1514592	chrX_77901840_+	ncRNA_exonic
CAediting_1514593	chrX_77901842_+	ncRNA_exonic
CAediting_1514594	chrX_77901854_+	ncRNA_exonic
CAediting_1514595	chrX_77901864_+	ncRNA_exonic
CAediting_1514596	chrX_77901919_+	ncRNA_intronic
CAediting_1514597	chrX_77901921_+	ncRNA_intronic
CAediting_1514598	chrX_77901923_+	ncRNA_intronic
CAediting_1514599	chrX_77901933_+	ncRNA_intronic
CAediting_1514600	chrX_77901947_+	ncRNA_intronic
CAediting_1514601	chrX_77901956_+	ncRNA_intronic
CAediting_1514602	chrX_77901957_+	ncRNA_intronic
CAediting_1514603	chrX_77901958_+	ncRNA_intronic
CAediting_1514604	chrX_77901970_+	ncRNA_intronic
CAediting_1514605	chrX_77901971_+	ncRNA_intronic
CAediting_1514606	chrX_77901983_+	ncRNA_intronic
CAediting_1514607	chrX_77901996_+	ncRNA_intronic
CAediting_1514608	chrX_77901998_+	ncRNA_intronic
CAediting_1514609	chrX_77902001_+	ncRNA_intronic
CAediting_1514610	chrX_77902010_+	ncRNA_intronic
CAediting_1514611	chrX_77902012_+	ncRNA_intronic
CAediting_1514612	chrX_77903125_+	ncRNA_exonic
CAediting_1514613	chrX_77903126_+	ncRNA_exonic
CAediting_1514614	chrX_77903259_+	ncRNA_intronic
CAediting_1514615	chrX_77903295_+	ncRNA_intronic
CAediting_1514616	chrX_77903320_+	ncRNA_intronic
CAediting_1514617	chrX_77903324_+	ncRNA_intronic
CAediting_1514618	chrX_77903333_+	ncRNA_intronic
CAediting_1514619	chrX_77903335_+	ncRNA_intronic
CAediting_1514620	chrX_77903349_+	ncRNA_intronic
CAediting_1514621	chrX_77903358_+	ncRNA_intronic
CAediting_1514622	chrX_77903368_+	ncRNA_intronic
CAediting_1514623	chrX_77903374_+	ncRNA_intronic
CAediting_1514624	chrX_77903377_+	ncRNA_intronic
CAediting_1514625	chrX_77903394_+	ncRNA_intronic
CAediting_1514626	chrX_77903428_+	ncRNA_intronic
CAediting_1514627	chrX_77903454_+	ncRNA_intronic
CAediting_1514628	chrX_77903455_+	ncRNA_intronic
CAediting_1514629	chrX_77903456_+	ncRNA_intronic
CAediting_1514630	chrX_77903462_+	ncRNA_intronic
CAediting_1514631	chrX_77903468_+	ncRNA_intronic
CAediting_1514632	chrX_77903470_+	ncRNA_intronic
CAediting_1514633	chrX_77903477_+	ncRNA_intronic
CAediting_1514634	chrX_77903490_+	ncRNA_intronic
CAediting_1514635	chrX_77903997_+	ncRNA_intronic
CAediting_1514636	chrX_77904007_+	ncRNA_intronic
CAediting_1514637	chrX_77904179_+	ncRNA_intronic
CAediting_1514638	chrX_77904192_+	ncRNA_intronic
CAediting_1514639	chrX_77904193_+	ncRNA_intronic
CAediting_1514640	chrX_77904194_+	ncRNA_intronic
CAediting_1514641	chrX_77904206_+	ncRNA_intronic
CAediting_1514642	chrX_77904209_+	ncRNA_intronic
CAediting_1514643	chrX_77904355_+	ncRNA_intronic
CAediting_1514644	chrX_77904356_+	ncRNA_intronic
CAediting_1514645	chrX_77904387_+	ncRNA_intronic
CAediting_1514646	chrX_77904395_+	ncRNA_intronic
CAediting_1514647	chrX_77904401_+	ncRNA_intronic
CAediting_1514648	chrX_77904404_+	ncRNA_intronic
CAediting_1514649	chrX_77904412_+	ncRNA_intronic
CAediting_1514650	chrX_77904431_+	ncRNA_intronic
CAediting_1514651	chrX_77904441_+	ncRNA_intronic
CAediting_1514652	chrX_77904455_+	ncRNA_intronic
CAediting_1514653	chrX_77904465_+	ncRNA_intronic
CAediting_1514654	chrX_77904466_+	ncRNA_intronic
CAediting_1514655	chrX_77904471_+	ncRNA_intronic
CAediting_1514656	chrX_77904481_+	ncRNA_intronic
CAediting_1514657	chrX_77904482_+	ncRNA_intronic
CAediting_1514658	chrX_77904483_+	ncRNA_intronic
CAediting_1514659	chrX_77904486_+	ncRNA_intronic
CAediting_1514660	chrX_77904489_+	ncRNA_intronic
CAediting_1514661	chrX_77904490_+	ncRNA_intronic
CAediting_1514662	chrX_77904491_+	ncRNA_intronic
CAediting_1514663	chrX_77904492_+	ncRNA_intronic
CAediting_1514664	chrX_77904495_+	ncRNA_intronic
CAediting_1514665	chrX_77904521_+	ncRNA_intronic
CAediting_1514666	chrX_77904527_+	ncRNA_intronic
CAediting_1514667	chrX_77904585_+	ncRNA_intronic
CAediting_1514668	chrX_77904589_+	ncRNA_intronic
CAediting_1514669	chrX_77904594_+	ncRNA_intronic
CAediting_1514670	chrX_77904596_+	ncRNA_intronic
CAediting_1514671	chrX_77904627_+	ncRNA_intronic
CAediting_1514672	chrX_77905560_+	UTR3
CAediting_1514673	chrX_77905624_+	UTR3
CAediting_1514674	chrX_77905632_+	UTR3
CAediting_1514675	chrX_77905636_+	UTR3
CAediting_1514676	chrX_77905789_+	UTR3
CAediting_1514677	chrX_77905792_+	UTR3
CAediting_1514678	chrX_77905794_+	UTR3
CAediting_1514679	chrX_77905833_+	UTR3
CAediting_1514680	chrX_77905850_+	UTR3
CAediting_1514681	chrX_77905912_+	UTR3
CAediting_1514682	chrX_77905913_+	UTR3
CAediting_1514683	chrX_77905925_+	UTR3
CAediting_1514684	chrX_77905974_+	UTR3
CAediting_1514685	chrX_77905987_+	UTR3
CAediting_1514686	chrX_77905994_+	UTR3
CAediting_1514687	chrX_77906047_+	UTR3
CAediting_1514688	chrX_77906053_+	UTR3
CAediting_1514689	chrX_77906659_+	UTR3
CAediting_1514690	chrX_77906727_+	UTR3
CAediting_1514691	chrX_77906728_+	UTR3
CAediting_1514692	chrX_77906767_+	UTR3
CAediting_1514693	chrX_77906769_+	UTR3
CAediting_1514694	chrX_77906828_+	UTR3
CAediting_1514695	chrX_77906857_+	UTR3
CAediting_1514696	chrX_77906875_+	UTR3
CAediting_1514697	chrX_77906880_+	UTR3
CAediting_1514698	chrX_77906888_+	UTR3
CAediting_1514699	chrX_77906890_+	UTR3
CAediting_1514700	chrX_77906896_+	UTR3
CAediting_1514701	chrX_77906911_+	UTR3

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1514571	chrX_77900089_+	SINE	Alu	AluSq
CAediting_1514572	chrX_77900111_+	SINE	Alu	AluSq
CAediting_1514573	chrX_77900112_+	SINE	Alu	AluSq
CAediting_1514574	chrX_77900117_+	SINE	Alu	AluSq
CAediting_1514575	chrX_77900247_+	SINE	Alu	AluSq
CAediting_1514576	chrX_77900274_+	SINE	Alu	AluSq
CAediting_1514577	chrX_77900278_+	SINE	Alu	AluSq
CAediting_1514578	chrX_77900288_+	SINE	Alu	AluSq
CAediting_1514579	chrX_77901268_+	SINE	Alu	AluSq
CAediting_1514580	chrX_77901269_+	SINE	Alu	AluSq
CAediting_1514581	chrX_77901346_+	SINE	Alu	AluSq
CAediting_1514582	chrX_77901746_+	SINE	Alu	AluJr
CAediting_1514583	chrX_77901748_+	SINE	Alu	AluJr
CAediting_1514584	chrX_77901753_+	SINE	Alu	AluJr
CAediting_1514585	chrX_77901764_+	SINE	Alu	AluJr
CAediting_1514586	chrX_77901768_+	SINE	Alu	AluJr
CAediting_1514587	chrX_77901794_+	SINE	Alu	AluJr
CAediting_1514588	chrX_77901799_+	SINE	Alu	AluJr
CAediting_1514589	chrX_77901804_+	SINE	Alu	AluJr
CAediting_1514590	chrX_77901824_+	SINE	Alu	AluJr
CAediting_1514591	chrX_77901825_+	SINE	Alu	AluJr
CAediting_1514592	chrX_77901840_+	SINE	Alu	AluJr
CAediting_1514593	chrX_77901842_+	SINE	Alu	AluJr
CAediting_1514594	chrX_77901854_+	SINE	Alu	AluJr
CAediting_1514595	chrX_77901864_+	SINE	Alu	AluJr
CAediting_1514596	chrX_77901919_+	SINE	Alu	AluJr
CAediting_1514597	chrX_77901921_+	SINE	Alu	AluJr
CAediting_1514598	chrX_77901923_+	SINE	Alu	AluJr
CAediting_1514599	chrX_77901933_+	SINE	Alu	AluJr
CAediting_1514600	chrX_77901947_+	SINE	Alu	AluJr
CAediting_1514601	chrX_77901956_+	SINE	Alu	AluJr
CAediting_1514602	chrX_77901957_+	SINE	Alu	AluJr
CAediting_1514603	chrX_77901958_+	SINE	Alu	AluJr
CAediting_1514604	chrX_77901970_+	SINE	Alu	AluJr
CAediting_1514605	chrX_77901971_+	SINE	Alu	AluJr
CAediting_1514606	chrX_77901983_+	SINE	Alu	AluJr
CAediting_1514607	chrX_77901996_+	SINE	Alu	AluJr
CAediting_1514608	chrX_77901998_+	SINE	Alu	AluJr
CAediting_1514609	chrX_77902001_+	SINE	Alu	AluJr
CAediting_1514610	chrX_77902010_+	SINE	Alu	AluJr
CAediting_1514611	chrX_77902012_+	SINE	Alu	AluJr
CAediting_1514612	chrX_77903125_+	SINE	Alu	AluSc8
CAediting_1514613	chrX_77903126_+	SINE	Alu	AluSc8
CAediting_1514614	chrX_77903259_+	SINE	Alu	AluSx1
CAediting_1514615	chrX_77903295_+	SINE	Alu	AluSx1
CAediting_1514616	chrX_77903320_+	SINE	Alu	AluSx1
CAediting_1514617	chrX_77903324_+	SINE	Alu	AluSx1
CAediting_1514618	chrX_77903333_+	SINE	Alu	AluSx1
CAediting_1514619	chrX_77903335_+	SINE	Alu	AluSx1
CAediting_1514620	chrX_77903349_+	SINE	Alu	AluSx1
CAediting_1514621	chrX_77903358_+	SINE	Alu	AluSx1
CAediting_1514622	chrX_77903368_+	SINE	Alu	AluSx1
CAediting_1514623	chrX_77903374_+	SINE	Alu	AluSx1
CAediting_1514624	chrX_77903377_+	SINE	Alu	AluSx1
CAediting_1514625	chrX_77903394_+	SINE	Alu	AluSx1
CAediting_1514626	chrX_77903428_+	SINE	Alu	AluSx1
CAediting_1514627	chrX_77903454_+	SINE	Alu	AluSx1
CAediting_1514628	chrX_77903455_+	SINE	Alu	AluSx1
CAediting_1514629	chrX_77903456_+	SINE	Alu	AluSx1
CAediting_1514630	chrX_77903462_+	SINE	Alu	AluSx1
CAediting_1514631	chrX_77903468_+	SINE	Alu	AluSx1
CAediting_1514632	chrX_77903470_+	SINE	Alu	AluSx1
CAediting_1514633	chrX_77903477_+	SINE	Alu	AluSx1
CAediting_1514634	chrX_77903490_+	SINE	Alu	AluSx1
CAediting_1514635	chrX_77903997_+	SINE	Alu	AluY
CAediting_1514636	chrX_77904007_+	SINE	Alu	AluY
CAediting_1514637	chrX_77904179_+	SINE	Alu	AluY
CAediting_1514638	chrX_77904192_+	SINE	Alu	AluY
CAediting_1514639	chrX_77904193_+	SINE	Alu	AluY
CAediting_1514640	chrX_77904194_+	SINE	Alu	AluY
CAediting_1514641	chrX_77904206_+	SINE	Alu	AluY
CAediting_1514642	chrX_77904209_+	SINE	Alu	AluY
CAediting_1514645	chrX_77904387_+	SINE	Alu	AluSx1
CAediting_1514646	chrX_77904395_+	SINE	Alu	AluSx1
CAediting_1514647	chrX_77904401_+	SINE	Alu	AluSx1
CAediting_1514648	chrX_77904404_+	SINE	Alu	AluSx1
CAediting_1514649	chrX_77904412_+	SINE	Alu	AluSx1
CAediting_1514650	chrX_77904431_+	SINE	Alu	AluSx1
CAediting_1514651	chrX_77904441_+	SINE	Alu	AluSx1
CAediting_1514652	chrX_77904455_+	SINE	Alu	AluSx1
CAediting_1514653	chrX_77904465_+	SINE	Alu	AluSx1
CAediting_1514654	chrX_77904466_+	SINE	Alu	AluSx1
CAediting_1514655	chrX_77904471_+	SINE	Alu	AluSx1
CAediting_1514656	chrX_77904481_+	SINE	Alu	AluSx1
CAediting_1514657	chrX_77904482_+	SINE	Alu	AluSx1
CAediting_1514658	chrX_77904483_+	SINE	Alu	AluSx1
CAediting_1514659	chrX_77904486_+	SINE	Alu	AluSx1
CAediting_1514660	chrX_77904489_+	SINE	Alu	AluSx1
CAediting_1514661	chrX_77904490_+	SINE	Alu	AluSx1
CAediting_1514662	chrX_77904491_+	SINE	Alu	AluSx1
CAediting_1514663	chrX_77904492_+	SINE	Alu	AluSx1
CAediting_1514664	chrX_77904495_+	SINE	Alu	AluSx1
CAediting_1514665	chrX_77904521_+	SINE	Alu	AluSx1
CAediting_1514666	chrX_77904527_+	SINE	Alu	AluSx1
CAediting_1514667	chrX_77904585_+	SINE	Alu	AluSx1
CAediting_1514668	chrX_77904589_+	SINE	Alu	AluSx1
CAediting_1514669	chrX_77904594_+	SINE	Alu	AluSx1
CAediting_1514670	chrX_77904596_+	SINE	Alu	AluSx1
CAediting_1514671	chrX_77904627_+	SINE	Alu	AluSx1
CAediting_1514672	chrX_77905560_+	SINE	Alu	AluSx
CAediting_1514673	chrX_77905624_+	SINE	Alu	AluSx
CAediting_1514674	chrX_77905632_+	SINE	Alu	AluSx
CAediting_1514675	chrX_77905636_+	SINE	Alu	AluSx
CAediting_1514676	chrX_77905789_+	SINE	Alu	AluSg
CAediting_1514677	chrX_77905792_+	SINE	Alu	AluSg
CAediting_1514678	chrX_77905794_+	SINE	Alu	AluSg
CAediting_1514679	chrX_77905833_+	SINE	Alu	AluSg
CAediting_1514680	chrX_77905850_+	SINE	Alu	AluSg
CAediting_1514681	chrX_77905912_+	SINE	Alu	AluSg
CAediting_1514682	chrX_77905913_+	SINE	Alu	AluSg
CAediting_1514683	chrX_77905925_+	SINE	Alu	AluSg
CAediting_1514684	chrX_77905974_+	SINE	Alu	AluSx
CAediting_1514685	chrX_77905987_+	SINE	Alu	AluSx
CAediting_1514686	chrX_77905994_+	SINE	Alu	AluSx
CAediting_1514687	chrX_77906047_+	SINE	Alu	AluSx
CAediting_1514688	chrX_77906053_+	SINE	Alu	AluSx
CAediting_1514689	chrX_77906659_+	SINE	Alu	AluSx1
CAediting_1514690	chrX_77906727_+	SINE	Alu	AluSx1
CAediting_1514691	chrX_77906728_+	SINE	Alu	AluSx1
CAediting_1514692	chrX_77906767_+	SINE	Alu	AluSx1
CAediting_1514693	chrX_77906769_+	SINE	Alu	AluSx1
CAediting_1514694	chrX_77906828_+	SINE	Alu	AluSx1
CAediting_1514695	chrX_77906857_+	SINE	Alu	AluSx1
CAediting_1514696	chrX_77906875_+	SINE	Alu	AluSx1
CAediting_1514697	chrX_77906880_+	SINE	Alu	AluSx1
CAediting_1514698	chrX_77906888_+	SINE	Alu	AluSx1
CAediting_1514699	chrX_77906890_+	SINE	Alu	AluSx1
CAediting_1514700	chrX_77906896_+	SINE	Alu	AluSx1
CAediting_1514701	chrX_77906911_+	SINE	Alu	AluSx1

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RNA A-to-I editing events in the alternative splicing sites for COX7B

RNA A-to-I editing(s) in the alternative splicing sites.

AStype	CAeditomID	Editing position	AS position	AS direction	Exonic location	Wildtype sequence	Wildtype splicing strength	RNA edited sequence	RNA edited splicing strength
ES	CAediting_1514596	chrX_77901919_+	77901900:77901922	3SS	0+1i	TAATTTTCAATTTTTTTGTAGAG	-14.79	TAATTTTCAATTTTTTTGTGGAG	-6.04
MEX_2	CAediting_1514596	chrX_77901919_+	77901900:77901922	3SS	0+1i	TAATTTTCAATTTTTTTGTAGAG	-14.79	TAATTTTCAATTTTTTTGTGGAG	-6.04
ES	CAediting_1514597	chrX_77901921_+	77901900:77901922	3SS	2+0i	TAATTTTCAATTTTTTTGTAGAG	-14.79	TAATTTTCAATTTTTTTGTAGGG	-20.09
MEX_2	CAediting_1514597	chrX_77901921_+	77901900:77901922	3SS	2+0i	TAATTTTCAATTTTTTTGTAGAG	-14.79	TAATTTTCAATTTTTTTGTAGGG	-20.09
ES	CAediting_1514607	chrX_77901996_+	77901996:77902004	5SS	3+0i	AAAGTATTG	-1.65	GAAGTATTG	-1.95
MEX_2	CAediting_1514607	chrX_77901996_+	77901996:77902004	5SS	3+0i	AAAGTATTG	-1.65	GAAGTATTG	-1.95
ES	CAediting_1514608	chrX_77901998_+	77901996:77902004	5SS	1+0i	AAAGTATTG	-1.65	AAGGTATTG	7.76
MEX_2	CAediting_1514608	chrX_77901998_+	77901996:77902004	5SS	1+0i	AAAGTATTG	-1.65	AAGGTATTG	7.76
ES	CAediting_1514609	chrX_77902001_+	77901996:77902004	5SS	0+3i	AAAGTATTG	-1.65	AAAGTGTTG	-8.85
MEX_2	CAediting_1514609	chrX_77902001_+	77901996:77902004	5SS	0+3i	AAAGTATTG	-1.65	AAAGTGTTG	-8.85

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000131174.4.COX7B.

Correlation between RNA A-to-I editing and PSI for ENSG00000131174.4.COX7B.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for COX7B

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

ESCA.CAediting_1514597.ENSG00000131174.COX7B.png
Soverview

GBM.CAediting_1514597.ENSG00000131174.COX7B.png
Soverview

LGG.CAediting_1514583.ENSG00000131174.COX7B.png
Soverview

LGG.CAediting_1514605.ENSG00000131174.COX7B.png
Soverview

LUAD.CAediting_1514597.ENSG00000131174.COX7B.png
Soverview

LUAD.CAediting_1514605.ENSG00000131174.COX7B.png
Soverview

OV.CAediting_1514597.ENSG00000131174.COX7B.png
Soverview

OV.CAediting_1514605.ENSG00000131174.COX7B.png
Soverview

THYM.CAediting_1514605.ENSG00000131174.COX7B.png
Soverview

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Protein coding region RNA A-to-I editings for COX7B

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for COX7B

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for COX7B

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for COX7B

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
LGG	CAediting_1514583	chrX_77901748_+	.	.	.	.	0.00436268295327281	0.15996291309004
BRCA	CAediting_1514583	chrX_77901748_+	1.87198141140906e-05	0.198309779814821	.	.	.	.
LIHC	CAediting_1514583	chrX_77901748_+	0.017405188487799	0.190794671536916	.	.	.	.
LUAD	CAediting_1514583	chrX_77901748_+	0.0426903708718681	0.155185669128606	.	.	.	.
LUSC	CAediting_1514583	chrX_77901748_+	4.38877012167725e-05	0.260012945918268	.	.	0.00277216085683876	0.191930324698503
THCA	CAediting_1514583	chrX_77901748_+	0.000179814636474523	0.215699295408054	.	.	.	.
ESCA	CAediting_1514583	chrX_77901748_+	.	.	.	.	0.0341315056767684	0.218780810484853
OV	CAediting_1514583	chrX_77901748_+	0.0460315508282919	0.115477270004761	.	.	.	.
SKCM	CAediting_1514583	chrX_77901748_+	.	.	0.031169113205594	0.180305249371179	.	.
THYM	CAediting_1514583	chrX_77901748_+	0.023656729980504	0.307599202107621	.	.	.	.
BRCA	CAediting_1514595	chrX_77901864_+	.	.	0.00544995223428214	0.239722386018228	.	.
LUAD	CAediting_1514595	chrX_77901864_+	0.012089096950353	0.339248287119579	.	.	.	.
BLCA	CAediting_1514597	chrX_77901921_+	0.00891823689023952	0.359199401925894	.	.	.	.
BRCA	CAediting_1514597	chrX_77901921_+	0.0448116952292135	0.109212676789178	.	.	.	.
SKCM	CAediting_1514597	chrX_77901921_+	0.0248074450796132	0.302453780924148	.	.	.	.
BLCA	CAediting_1514605	chrX_77901971_+	0.00305041170430168	0.249550757642356	.	.	.	.
LGG	CAediting_1514605	chrX_77901971_+	.	.	0.000217074268730579	0.16908892999927	0.0282201664865673	0.100792847948083
BRCA	CAediting_1514605	chrX_77901971_+	1.07024211019036e-18	0.300304309658063	.	.	.	.
LIHC	CAediting_1514605	chrX_77901971_+	1.83851389661469e-06	0.29137154340305	.	.	.	.
CESC	CAediting_1514605	chrX_77901971_+	1.99604609304639e-06	0.373392951966725	.	.	.	.
LUAD	CAediting_1514605	chrX_77901971_+	0.0497480697419697	0.125245323076461	.	.	.	.
COAD	CAediting_1514605	chrX_77901971_+	0.0236998199739133	0.16950657654264	.	.	.	.
LUSC	CAediting_1514605	chrX_77901971_+	5.35132699874521e-05	0.24371733473868	.	.	.	.
GBM	CAediting_1514605	chrX_77901971_+	.	.	0.0480553037977148	0.164474590099601	.	.
PRAD	CAediting_1514605	chrX_77901971_+	0.0123348106729821	0.143607828254614	.	.	.	.
STAD	CAediting_1514605	chrX_77901971_+	0.0264630705044707	0.140936589477508	.	.	.	.
KICH	CAediting_1514605	chrX_77901971_+	0.0031677055951672	0.368962972030331	.	.	.	.
THCA	CAediting_1514605	chrX_77901971_+	2.46393822435539e-06	0.218075789815818	.	.	.	.
KIRC	CAediting_1514605	chrX_77901971_+	8.25874165015505e-09	0.281431670737705	.	.	.	.
UCEC	CAediting_1514605	chrX_77901971_+	0.0105451623165783	0.247456745796099	.	.	.	.
ESCA	CAediting_1514605	chrX_77901971_+	0.0337122642603634	0.182242726291116	0.00624864355741317	0.233383391597962	.	.
OV	CAediting_1514605	chrX_77901971_+	0.000223957838266271	0.200325845329765	.	.	.	.
PCPG	CAediting_1514605	chrX_77901971_+	0.00270409592222329	0.226715457961268	.	.	.	.
SKCM	CAediting_1514605	chrX_77901971_+	0.00120280617917328	0.244925685980407	0.0039092092077498	0.218930403669981	.	.
READ	CAediting_1514605	chrX_77901971_+	0.000920275417627232	0.379769056176601	0.0356767655233237	0.24630551321109	.	.
SARC	CAediting_1514605	chrX_77901971_+	0.000125155919626336	0.348677340524865	.	.	.	.
THYM	CAediting_1514605	chrX_77901971_+	0.0163764783265929	0.267670541189361	.	.	.	.
LIHC	CAediting_1514608	chrX_77901998_+	0.00722735084959757	0.265768387485377	.	.	.	.
LGG	CAediting_1514610	chrX_77902010_+	.	.	0.000523567516166117	0.421470762912879	.	.
PCPG	CAediting_1514610	chrX_77902010_+	.	.	0.0184095515452369	0.296221605080403	.	.

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Relation with cancer stages for COX7B

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
BRCA	pathologic_stage	CAediting_1514605	chrX_77901971_+	0.00935896187925056	0.0914270761847177
BRCA	pathologic_stage	CAediting_1514608	chrX_77901998_+	0.024097137035349	0.159870916019889
ESCA	clinical_stage	CAediting_1514601	chrX_77901956_+	0.0157686250927435	0.574916101776179
ESCA	pathologic_stage	CAediting_1514605	chrX_77901971_+	0.0355117193988733	0.189785043268166
KIRP	pathologic_stage	CAediting_1514597	chrX_77901921_+	0.0205766780409374	0.280355971572055
LUSC	pathologic_stage	CAediting_1514583	chrX_77901748_+	0.0461855140239022	0.129369515399134
LUSC	pathologic_stage	CAediting_1514597	chrX_77901921_+	0.00251153277880883	0.316521602870493
SKCM	pathologic_stage	CAediting_1514583	chrX_77901748_+	0.0415262312102946	-0.179741980724837

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Relation with survival for COX7B

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
LGG	CAediting_1514583	chrX_77901748_+	0.0138731005510998	0.00513797	0.105782
BRCA	CAediting_1514583	chrX_77901748_+	0.0400391496186494	0.0395027	0.170987

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RelatedDrugs for COX7B

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene	UniProtAcc	DrugBank ID	Drug name	Drug activity	Drug type	Drug status
COX7B	P24311	DB02659	Cholic Acid	Cytochrome c oxidase subunit 7B, mitochondrial	SmallMoleculeDrug	approved

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RelatedDiseases for COX7B

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
COX7B	C3550921	LINEAR SKIN DEFECTS WITH MULTIPLE CONGENITAL ANOMALIES 2	3	CTD_human;GENOMICS_ENGLAND
COX7B	C0796070	MICROPHTHALMIA, SYNDROMIC 7	1	CTD_human;ORPHANET

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene