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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: COX6C (CAeditome ID:1345)

Gene summary for COX6C

check button Gene summary
Gene informationGene symbol

COX6C

Gene ID

1345

Gene namecytochrome c oxidase subunit 6C
Synonyms-
Cytomap

8q22.2

Type of geneprotein-coding
Descriptioncytochrome c oxidase subunit 6Ccytochrome c oxidase polypeptide VIccytochrome c oxidase subunit VIc preproteinepididymis secretory sperm binding protein
Modification date20210518
UniProtAcc

P09669

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
COX6C

GO:0005739

Cytochrome c oxidase subunit 6C

0000052


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RNA A-to-I events for COX6C

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000164919.9

check button RNA A-to-I editing events in Cancer.
CAediting_653150(99878929, -), CAediting_653151(99878935, -), CAediting_653152(99878940, -), CAediting_653153(99878946, -), CAediting_653154(99878960, -), CAediting_653155(99878961, -), CAediting_653156(99880650, -), CAediting_653157(99880656, -), CAediting_653158(99880687, -), CAediting_653159(99880701, -), CAediting_653160(99880703, -), CAediting_653161(99881197, -), CAediting_653162(99881260, -), CAediting_653163(99881274, -), CAediting_653164(99881277, -), CAediting_653165(99881361, -), CAediting_653166(99882840, -), CAediting_653167(99882845, -), CAediting_653168(99882850, -), CAediting_653169(99882855, -), CAediting_653170(99882882, -), CAediting_653171(99882900, -), CAediting_653172(99882931, -), CAediting_653173(99882933, -), CAediting_653174(99882938, -), CAediting_653175(99883004, -), CAediting_653176(99883034, -), CAediting_653177(99883037, -), CAediting_653178(99883039, -), CAediting_653179(99883060, -), CAediting_653180(99883077, -), CAediting_653181(99883253, -), CAediting_653182(99883272, -), CAediting_653183(99883277, -), CAediting_653184(99883288, -), CAediting_653185(99883297, -), CAediting_653186(99883298, -), CAediting_653187(99883306, -), CAediting_653188(99883322, -), CAediting_653189(99883325, -), CAediting_653190(99883342, -), CAediting_653191(99883346, -), CAediting_653192(99883352, -), CAediting_653193(99883497, -), CAediting_653194(99883498, -), CAediting_653195(99883503, -), CAediting_653196(99883505, -), CAediting_653197(99883506, -), CAediting_653198(99883522, -), CAediting_653199(99883529, -), CAediting_653200(99883574, -), CAediting_653201(99883575, -), CAediting_653202(99884636, -), CAediting_653203(99884649, -), CAediting_653204(99884650, -), CAediting_653205(99884651, -), CAediting_653206(99884652, -), CAediting_653207(99884679, -), CAediting_653208(99884689, -), CAediting_653209(99884690, -), CAediting_653210(99884693, -), CAediting_653211(99884699, -), CAediting_653212(99884701, -), CAediting_653213(99884708, -), CAediting_653214(99884726, -), CAediting_653215(99884730, -), CAediting_653216(99884731, -), CAediting_653217(99884733, -), CAediting_653218(99884734, -), CAediting_653219(99884765, -), CAediting_653220(99884766, -), CAediting_653221(99884770, -), CAediting_653222(99884773, -), CAediting_653223(99884777, -), CAediting_653224(99884787, -), CAediting_653225(99884795, -), CAediting_653226(99885288, -), CAediting_653227(99885298, -), CAediting_653228(99885302, -), CAediting_653229(99885303, -), CAediting_653230(99885309, -), CAediting_653231(99885310, -), CAediting_653232(99885326, -), CAediting_653233(99885364, -), CAediting_653234(99885366, -), CAediting_653235(99885369, -), CAediting_653236(99885376, -), CAediting_653237(99885378, -), CAediting_653238(99885381, -), CAediting_653239(99885382, -), CAediting_653240(99885405, -), CAediting_653241(99885406, -), CAediting_653242(99885422, -), CAediting_653243(99885474, -), CAediting_653244(99885980, -), CAediting_653245(99886012, -), CAediting_653246(99886133, -), CAediting_653247(99886145, -), CAediting_653248(99886160, -), CAediting_653249(99886202, -), CAediting_653250(99886205, -), CAediting_653251(99886210, -), CAediting_653252(99886218, -), CAediting_653253(99886227, -), CAediting_653254(99886250, -), CAediting_653255(99886266, -), CAediting_653256(99886268, -), CAediting_653257(99886278, -), CAediting_653258(99886281, -), CAediting_653259(99886290, -), CAediting_653260(99886307, -), CAediting_653261(99886308, -), CAediting_653262(99886314, -), CAediting_653263(99886322, -), CAediting_653264(99886333, -), CAediting_653265(99886340, -), CAediting_653266(99886343, -), CAediting_653267(99886349, -), CAediting_653268(99886364, -), CAediting_653269(99886368, -), CAediting_653270(99888053, -), CAediting_653271(99888307, -), CAediting_653272(99888328, -), CAediting_653273(99888351, -), CAediting_653274(99888405, -), CAediting_653275(99888408, -), CAediting_653276(99888449, -), CAediting_653277(99888471, -), CAediting_653278(99888489, -), CAediting_653279(99888495, -), CAediting_653280(99888570, -), CAediting_653281(99888573, -), CAediting_653282(99889337, -), CAediting_653283(99889478, -), CAediting_653284(99889482, -), CAediting_653285(99889483, -), CAediting_653286(99889501, -), CAediting_653287(99889507, -), CAediting_653288(99889518, -), CAediting_653289(99889523, -), CAediting_653290(99889524, -), CAediting_653291(99889530, -), CAediting_653292(99889581, -), CAediting_653293(99889583, -), CAediting_653294(99889679, -), CAediting_653295(99889846, -), CAediting_653296(99889902, -), CAediting_653297(99889924, -), CAediting_653298(99889927, -), CAediting_653299(99889945, -), CAediting_653300(99889954, -), CAediting_653301(99890056, -), CAediting_653302(99890080, -), CAediting_653303(99890156, -), CAediting_653304(99890195, -), CAediting_653305(99890218, -), CAediting_653306(99890219, -), CAediting_653307(99890235, -), CAediting_653308(99890236, -), CAediting_653309(99891334, -), CAediting_653310(99891346, -), CAediting_653311(99891409, -), CAediting_653312(99891410, -),

Top

RNA editing positional annotations for COX6C using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_653150chr8_99878929_-intronic
CAediting_653151chr8_99878935_-intronic
CAediting_653152chr8_99878940_-intronic
CAediting_653153chr8_99878946_-intronic
CAediting_653154chr8_99878960_-intronic
CAediting_653155chr8_99878961_-intronic
CAediting_653156chr8_99880650_-intronic
CAediting_653157chr8_99880656_-intronic
CAediting_653158chr8_99880687_-intronic
CAediting_653159chr8_99880701_-intronic
CAediting_653160chr8_99880703_-intronic
CAediting_653161chr8_99881197_-intronic
CAediting_653162chr8_99881260_-intronic
CAediting_653163chr8_99881274_-intronic
CAediting_653164chr8_99881277_-intronic
CAediting_653165chr8_99881361_-intronic
CAediting_653166chr8_99882840_-intronic
CAediting_653167chr8_99882845_-intronic
CAediting_653168chr8_99882850_-intronic
CAediting_653169chr8_99882855_-intronic
CAediting_653170chr8_99882882_-intronic
CAediting_653171chr8_99882900_-intronic
CAediting_653172chr8_99882931_-intronic
CAediting_653173chr8_99882933_-intronic
CAediting_653174chr8_99882938_-intronic
CAediting_653175chr8_99883004_-intronic
CAediting_653176chr8_99883034_-intronic
CAediting_653177chr8_99883037_-intronic
CAediting_653178chr8_99883039_-intronic
CAediting_653179chr8_99883060_-intronic
CAediting_653180chr8_99883077_-intronic
CAediting_653181chr8_99883253_-intronic
CAediting_653182chr8_99883272_-intronic
CAediting_653183chr8_99883277_-intronic
CAediting_653184chr8_99883288_-intronic
CAediting_653185chr8_99883297_-intronic
CAediting_653186chr8_99883298_-intronic
CAediting_653187chr8_99883306_-intronic
CAediting_653188chr8_99883322_-intronic
CAediting_653189chr8_99883325_-intronic
CAediting_653190chr8_99883342_-intronic
CAediting_653191chr8_99883346_-intronic
CAediting_653192chr8_99883352_-intronic
CAediting_653193chr8_99883497_-intronic
CAediting_653194chr8_99883498_-intronic
CAediting_653195chr8_99883503_-intronic
CAediting_653196chr8_99883505_-intronic
CAediting_653197chr8_99883506_-intronic
CAediting_653198chr8_99883522_-intronic
CAediting_653199chr8_99883529_-intronic
CAediting_653200chr8_99883574_-intronic
CAediting_653201chr8_99883575_-intronic
CAediting_653202chr8_99884636_-intronic
CAediting_653203chr8_99884649_-intronic
CAediting_653204chr8_99884650_-intronic
CAediting_653205chr8_99884651_-intronic
CAediting_653206chr8_99884652_-intronic
CAediting_653207chr8_99884679_-intronic
CAediting_653208chr8_99884689_-intronic
CAediting_653209chr8_99884690_-intronic
CAediting_653210chr8_99884693_-intronic
CAediting_653211chr8_99884699_-intronic
CAediting_653212chr8_99884701_-intronic
CAediting_653213chr8_99884708_-intronic
CAediting_653214chr8_99884726_-intronic
CAediting_653215chr8_99884730_-intronic
CAediting_653216chr8_99884731_-intronic
CAediting_653217chr8_99884733_-intronic
CAediting_653218chr8_99884734_-intronic
CAediting_653219chr8_99884765_-intronic
CAediting_653220chr8_99884766_-intronic
CAediting_653221chr8_99884770_-intronic
CAediting_653222chr8_99884773_-intronic
CAediting_653223chr8_99884777_-intronic
CAediting_653224chr8_99884787_-intronic
CAediting_653225chr8_99884795_-intronic
CAediting_653226chr8_99885288_-intronic
CAediting_653227chr8_99885298_-intronic
CAediting_653228chr8_99885302_-intronic
CAediting_653229chr8_99885303_-intronic
CAediting_653230chr8_99885309_-intronic
CAediting_653231chr8_99885310_-intronic
CAediting_653232chr8_99885326_-intronic
CAediting_653233chr8_99885364_-intronic
CAediting_653234chr8_99885366_-intronic
CAediting_653235chr8_99885369_-intronic
CAediting_653236chr8_99885376_-intronic
CAediting_653237chr8_99885378_-intronic
CAediting_653238chr8_99885381_-intronic
CAediting_653239chr8_99885382_-intronic
CAediting_653240chr8_99885405_-intronic
CAediting_653241chr8_99885406_-intronic
CAediting_653242chr8_99885422_-intronic
CAediting_653243chr8_99885474_-intronic
CAediting_653244chr8_99885980_-intronic
CAediting_653245chr8_99886012_-UTR3
CAediting_653246chr8_99886133_-UTR3
CAediting_653247chr8_99886145_-UTR3
CAediting_653248chr8_99886160_-UTR3
CAediting_653249chr8_99886202_-UTR3
CAediting_653250chr8_99886205_-UTR3
CAediting_653251chr8_99886210_-UTR3
CAediting_653252chr8_99886218_-UTR3
CAediting_653253chr8_99886227_-UTR3
CAediting_653254chr8_99886250_-UTR3
CAediting_653255chr8_99886266_-UTR3
CAediting_653256chr8_99886268_-UTR3
CAediting_653257chr8_99886278_-UTR3
CAediting_653258chr8_99886281_-UTR3
CAediting_653259chr8_99886290_-UTR3
CAediting_653260chr8_99886307_-UTR3
CAediting_653261chr8_99886308_-UTR3
CAediting_653262chr8_99886314_-UTR3
CAediting_653263chr8_99886322_-UTR3
CAediting_653264chr8_99886333_-UTR3
CAediting_653265chr8_99886340_-UTR3
CAediting_653266chr8_99886343_-UTR3
CAediting_653267chr8_99886349_-UTR3
CAediting_653268chr8_99886364_-UTR3
CAediting_653269chr8_99886368_-UTR3
CAediting_653270chr8_99888053_-intronic
CAediting_653271chr8_99888307_-intronic
CAediting_653272chr8_99888328_-intronic
CAediting_653273chr8_99888351_-intronic
CAediting_653274chr8_99888405_-intronic
CAediting_653275chr8_99888408_-intronic
CAediting_653276chr8_99888449_-intronic
CAediting_653277chr8_99888471_-intronic
CAediting_653278chr8_99888489_-intronic
CAediting_653279chr8_99888495_-intronic
CAediting_653280chr8_99888570_-intronic
CAediting_653281chr8_99888573_-intronic
CAediting_653282chr8_99889337_-intronic
CAediting_653283chr8_99889478_-intronic
CAediting_653284chr8_99889482_-intronic
CAediting_653285chr8_99889483_-intronic
CAediting_653286chr8_99889501_-intronic
CAediting_653287chr8_99889507_-intronic
CAediting_653288chr8_99889518_-intronic
CAediting_653289chr8_99889523_-intronic
CAediting_653290chr8_99889524_-intronic
CAediting_653291chr8_99889530_-intronic
CAediting_653292chr8_99889581_-intronic
CAediting_653293chr8_99889583_-intronic
CAediting_653294chr8_99889679_-intronic
CAediting_653295chr8_99889846_-intronic
CAediting_653296chr8_99889902_-intronic
CAediting_653297chr8_99889924_-intronic
CAediting_653298chr8_99889927_-intronic
CAediting_653299chr8_99889945_-intronic
CAediting_653300chr8_99889954_-intronic
CAediting_653301chr8_99890056_-intronic
CAediting_653302chr8_99890080_-intronic
CAediting_653303chr8_99890156_-intronic
CAediting_653304chr8_99890195_-intronic
CAediting_653305chr8_99890218_-intronic
CAediting_653306chr8_99890219_-intronic
CAediting_653307chr8_99890235_-intronic
CAediting_653308chr8_99890236_-intronic
CAediting_653309chr8_99891334_-intronic
CAediting_653310chr8_99891346_-intronic
CAediting_653311chr8_99891409_-intronic
CAediting_653312chr8_99891410_-intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_653150chr8_99878929_-DNATcMar-TiggerTigger5b
CAediting_653151chr8_99878935_-DNATcMar-TiggerTigger5b
CAediting_653152chr8_99878940_-DNATcMar-TiggerTigger5b
CAediting_653153chr8_99878946_-DNATcMar-TiggerTigger5b
CAediting_653154chr8_99878960_-DNATcMar-TiggerTigger5b
CAediting_653155chr8_99878961_-DNATcMar-TiggerTigger5b
CAediting_653156chr8_99880650_-SINEAluAluJb
CAediting_653157chr8_99880656_-SINEAluAluJb
CAediting_653158chr8_99880687_-SINEAluAluJb
CAediting_653159chr8_99880701_-SINEAluAluJb
CAediting_653160chr8_99880703_-SINEAluAluJb
CAediting_653161chr8_99881197_-SINEAluAluSz
CAediting_653162chr8_99881260_-SINEAluAluSz
CAediting_653163chr8_99881274_-SINEAluAluSz
CAediting_653164chr8_99881277_-SINEAluAluSz
CAediting_653165chr8_99881361_-SINEAluAluSz
CAediting_653166chr8_99882840_-SINEAluAluJb
CAediting_653167chr8_99882845_-SINEAluAluJb
CAediting_653168chr8_99882850_-SINEAluAluJb
CAediting_653169chr8_99882855_-SINEAluAluJb
CAediting_653170chr8_99882882_-SINEAluAluJb
CAediting_653171chr8_99882900_-SINEAluAluJb
CAediting_653172chr8_99882931_-SINEAluAluJb
CAediting_653173chr8_99882933_-SINEAluAluJb
CAediting_653174chr8_99882938_-SINEAluAluJb
CAediting_653175chr8_99883004_-SINEAluAluJb
CAediting_653176chr8_99883034_-SINEAluAluJb
CAediting_653177chr8_99883037_-SINEAluAluJb
CAediting_653178chr8_99883039_-SINEAluAluJb
CAediting_653179chr8_99883060_-SINEAluAluJb
CAediting_653180chr8_99883077_-SINEAluAluJb
CAediting_653181chr8_99883253_-SINEAluAluJo
CAediting_653182chr8_99883272_-SINEAluAluJo
CAediting_653183chr8_99883277_-SINEAluAluJo
CAediting_653184chr8_99883288_-SINEAluAluJo
CAediting_653185chr8_99883297_-SINEAluAluJo
CAediting_653186chr8_99883298_-SINEAluAluJo
CAediting_653187chr8_99883306_-SINEAluAluJo
CAediting_653188chr8_99883322_-SINEAluAluJo
CAediting_653189chr8_99883325_-SINEAluAluJo
CAediting_653190chr8_99883342_-SINEAluAluJo
CAediting_653191chr8_99883346_-SINEAluAluJo
CAediting_653192chr8_99883352_-SINEAluAluJo
CAediting_653193chr8_99883497_-SINEAluAluJo
CAediting_653194chr8_99883498_-SINEAluAluJo
CAediting_653195chr8_99883503_-SINEAluAluJo
CAediting_653196chr8_99883505_-SINEAluAluJo
CAediting_653197chr8_99883506_-SINEAluAluJo
CAediting_653198chr8_99883522_-SINEAluAluJo
CAediting_653199chr8_99883529_-SINEAluAluJo
CAediting_653200chr8_99883574_-SINEAluAluJo
CAediting_653201chr8_99883575_-SINEAluAluJo
CAediting_653202chr8_99884636_-LINEL1L1MB2
CAediting_653203chr8_99884649_-DNATcMar-TiggerTigger7
CAediting_653204chr8_99884650_-DNATcMar-TiggerTigger7
CAediting_653205chr8_99884651_-DNATcMar-TiggerTigger7
CAediting_653206chr8_99884652_-DNATcMar-TiggerTigger7
CAediting_653207chr8_99884679_-DNATcMar-TiggerTigger7
CAediting_653208chr8_99884689_-DNATcMar-TiggerTigger7
CAediting_653209chr8_99884690_-DNATcMar-TiggerTigger7
CAediting_653210chr8_99884693_-DNATcMar-TiggerTigger7
CAediting_653211chr8_99884699_-DNATcMar-TiggerTigger7
CAediting_653212chr8_99884701_-DNATcMar-TiggerTigger7
CAediting_653213chr8_99884708_-DNATcMar-TiggerTigger7
CAediting_653214chr8_99884726_-DNATcMar-TiggerTigger7
CAediting_653215chr8_99884730_-DNATcMar-TiggerTigger7
CAediting_653216chr8_99884731_-DNATcMar-TiggerTigger7
CAediting_653217chr8_99884733_-DNATcMar-TiggerTigger7
CAediting_653218chr8_99884734_-DNATcMar-TiggerTigger7
CAediting_653219chr8_99884765_-DNATcMar-TiggerTigger7
CAediting_653220chr8_99884766_-DNATcMar-TiggerTigger7
CAediting_653221chr8_99884770_-DNATcMar-TiggerTigger7
CAediting_653222chr8_99884773_-DNATcMar-TiggerTigger7
CAediting_653223chr8_99884777_-DNATcMar-TiggerTigger7
CAediting_653224chr8_99884787_-DNATcMar-TiggerTigger7
CAediting_653225chr8_99884795_-DNATcMar-TiggerTigger7
CAediting_653226chr8_99885288_-DNATcMar-TiggerMER44A
CAediting_653227chr8_99885298_-DNATcMar-TiggerMER44A
CAediting_653228chr8_99885302_-DNATcMar-TiggerMER44A
CAediting_653229chr8_99885303_-DNATcMar-TiggerMER44A
CAediting_653230chr8_99885309_-DNATcMar-TiggerMER44A
CAediting_653231chr8_99885310_-DNATcMar-TiggerMER44A
CAediting_653232chr8_99885326_-DNATcMar-TiggerMER44A
CAediting_653233chr8_99885364_-DNATcMar-TiggerMER44A
CAediting_653234chr8_99885366_-DNATcMar-TiggerMER44A
CAediting_653235chr8_99885369_-DNATcMar-TiggerMER44A
CAediting_653236chr8_99885376_-DNATcMar-TiggerMER44A
CAediting_653237chr8_99885378_-DNATcMar-TiggerMER44A
CAediting_653238chr8_99885381_-DNATcMar-TiggerMER44A
CAediting_653239chr8_99885382_-DNATcMar-TiggerMER44A
CAediting_653240chr8_99885405_-DNATcMar-TiggerMER44A
CAediting_653241chr8_99885406_-DNATcMar-TiggerMER44A
CAediting_653242chr8_99885422_-DNATcMar-TiggerMER44A
CAediting_653243chr8_99885474_-LINEL1L1MB2
CAediting_653244chr8_99885980_-LINEL1L1MB2
CAediting_653245chr8_99886012_-LINEL1L1MB2
CAediting_653246chr8_99886133_-SINEAluAluJb
CAediting_653247chr8_99886145_-SINEAluAluJb
CAediting_653248chr8_99886160_-SINEAluAluJb
CAediting_653249chr8_99886202_-SINEAluAluJb
CAediting_653250chr8_99886205_-SINEAluAluJb
CAediting_653251chr8_99886210_-SINEAluAluJb
CAediting_653252chr8_99886218_-SINEAluAluJb
CAediting_653253chr8_99886227_-SINEAluAluJb
CAediting_653254chr8_99886250_-SINEAluAluJb
CAediting_653255chr8_99886266_-SINEAluAluJb
CAediting_653256chr8_99886268_-SINEAluAluJb
CAediting_653257chr8_99886278_-SINEAluAluJb
CAediting_653258chr8_99886281_-SINEAluAluJb
CAediting_653259chr8_99886290_-SINEAluAluJb
CAediting_653260chr8_99886307_-SINEAluAluJb
CAediting_653261chr8_99886308_-SINEAluAluJb
CAediting_653262chr8_99886314_-SINEAluAluJb
CAediting_653263chr8_99886322_-SINEAluAluJb
CAediting_653264chr8_99886333_-SINEAluAluJb
CAediting_653265chr8_99886340_-SINEAluAluJb
CAediting_653266chr8_99886343_-SINEAluAluJb
CAediting_653267chr8_99886349_-SINEAluAluJb
CAediting_653268chr8_99886364_-SINEAluAluJb
CAediting_653269chr8_99886368_-SINEAluAluJb
CAediting_653270chr8_99888053_-SINEAluAluYc
CAediting_653271chr8_99888307_-SINEAluAluSg
CAediting_653272chr8_99888328_-SINEAluAluSg
CAediting_653273chr8_99888351_-SINEAluAluSg
CAediting_653274chr8_99888405_-SINEAluAluSg
CAediting_653275chr8_99888408_-SINEAluAluSg
CAediting_653276chr8_99888449_-SINEAluAluSg
CAediting_653277chr8_99888471_-SINEAluAluSg
CAediting_653278chr8_99888489_-SINEAluAluSg
CAediting_653279chr8_99888495_-SINEAluAluSg
CAediting_653280chr8_99888570_-SINEAluAluSg
CAediting_653281chr8_99888573_-SINEAluAluSg
CAediting_653282chr8_99889337_-SINEAluAluSx1
CAediting_653283chr8_99889478_-SINEAluAluSq2
CAediting_653284chr8_99889482_-SINEAluAluSq2
CAediting_653285chr8_99889483_-SINEAluAluSq2
CAediting_653286chr8_99889501_-SINEAluAluSq2
CAediting_653287chr8_99889507_-SINEAluAluSq2
CAediting_653288chr8_99889518_-SINEAluAluSq2
CAediting_653289chr8_99889523_-SINEAluAluSq2
CAediting_653290chr8_99889524_-SINEAluAluSq2
CAediting_653291chr8_99889530_-SINEAluAluSq2
CAediting_653292chr8_99889581_-SINEAluAluSq2
CAediting_653293chr8_99889583_-SINEAluAluSq2
CAediting_653294chr8_99889679_-SINEAluAluSq2
CAediting_653295chr8_99889846_-SINEAluAluY
CAediting_653296chr8_99889902_-SINEAluAluY
CAediting_653297chr8_99889924_-SINEAluAluY
CAediting_653298chr8_99889927_-SINEAluAluY
CAediting_653299chr8_99889945_-SINEAluAluY
CAediting_653300chr8_99889954_-SINEAluAluY
CAediting_653301chr8_99890056_-SINEAluAluY
CAediting_653302chr8_99890080_-SINEAluAluY
CAediting_653303chr8_99890156_-SINEAluAluSx1
CAediting_653304chr8_99890195_-SINEAluAluSx1
CAediting_653305chr8_99890218_-SINEAluAluSx1
CAediting_653306chr8_99890219_-SINEAluAluSx1
CAediting_653307chr8_99890235_-SINEAluAluSx1
CAediting_653308chr8_99890236_-SINEAluAluSx1
CAediting_653309chr8_99891334_-SINEAluAluJb
CAediting_653310chr8_99891346_-SINEAluAluJb
CAediting_653311chr8_99891409_-SINEAluAluJb
CAediting_653312chr8_99891410_-SINEAluAluJb

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RNA A-to-I editing events in the alternative splicing sites for COX6C

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength
ESCAediting_653255chr8_99886266_-99886258:998862665SS3+0iAGGCATGTG-24.57GGGCATGTG-27.89

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000164919.9.COX6C.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000164919.9.COX6C.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for COX6C

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for COX6C

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for COX6C

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_653249chr8_99886202_-ENSG00000164919.9ENST00000518171hsa-miR-4645-5p99886197998862037mer-m89988619699886214147.00-14.10
CAediting_653249chr8_99886202_-ENSG00000164919.9ENST00000518171hsa-miR-467399886197998862037mer-m89988619699886218144.00-20.75
CAediting_653249chr8_99886202_-ENSG00000164919.9ENST00000518171hsa-miR-469299886198998862036mer9988619799886218145.00-25.73
CAediting_653249chr8_99886202_-ENSG00000164919.9ENST00000518171hsa-miR-4742-5p99886198998862047mer-m89988619799886220143.00-16.08
CAediting_653250chr8_99886205_-ENSG00000164919.9ENST00000518171hsa-miR-314399886202998862076mer9988620199886226150.00-15.06
CAediting_653258chr8_99886281_-ENSG00000164919.9ENST00000518171hsa-miR-1343-3p99886278998862858mer-1a9988627899886299141.00-15.75
CAediting_653258chr8_99886281_-ENSG00000164919.9ENST00000518171hsa-miR-516a-3p99886276998862827mer-m89988627599886292141.00-17.01
CAediting_653258chr8_99886281_-ENSG00000164919.9ENST00000518171hsa-miR-516a-3p99886276998862827mer-m89988627599886292141.00-17.01
CAediting_653258chr8_99886281_-ENSG00000164919.9ENST00000518171hsa-miR-516b-3p99886276998862827mer-m89988627599886292141.00-17.01
CAediting_653258chr8_99886281_-ENSG00000164919.9ENST00000518171hsa-miR-516b-3p99886276998862827mer-m89988627599886292141.00-17.01
CAediting_653258chr8_99886281_-ENSG00000164919.9ENST00000518171hsa-miR-6783-3p99886278998862858mer-1a9988627899886299141.00-17.82
CAediting_653258chr8_99886281_-ENSG00000164919.9ENST00000518171hsa-miR-6852-5p99886279998862857mer-1a9988627999886298149.00-26.78
CAediting_653258chr8_99886281_-ENSG00000164919.9ENST00000518171hsa-miR-7162-5p99886276998862827mer-m89988627599886292140.00-15.47
CAediting_653267chr8_99886349_-ENSG00000164919.9ENST00000518171hsa-miR-140-3p99886347998863537mer-m89988634699886366140.00-20.49
CAediting_653269chr8_99886368_-ENSG00000164919.9ENST00000518171hsa-miR-1285-3p99886363998863686mer9988636299886382152.00-28.89
CAediting_653269chr8_99886368_-ENSG00000164919.9ENST00000518171hsa-miR-1285-3p99886363998863686mer9988636299886382152.00-28.89
CAediting_653269chr8_99886368_-ENSG00000164919.9ENST00000518171hsa-miR-448699886363998863686mer9988636299886378147.00-20.79
CAediting_653247chr8_99886145_-ENSG00000164919.9ENST00000518171hsa-miR-3189-3p99886144998861507mer-m89988614399886162145.00-19.31
CAediting_653247chr8_99886145_-ENSG00000164919.9ENST00000518171hsa-miR-6813-3p99886143998861497mer-m89988614299886162140.00-16.10
CAediting_653251chr8_99886210_-ENSG00000164919.9ENST00000518171hsa-miR-807499886205998862117mer-m89988620499886228163.00-23.34
CAediting_653252chr8_99886218_-ENSG00000164919.9ENST00000518171hsa-miR-340-3p99886217998862237mer-m89988621699886237149.00-17.69
CAediting_653252chr8_99886218_-ENSG00000164919.9ENST00000518171hsa-miR-6827-3p99886217998862237mer-m89988621699886236153.00-17.53
CAediting_653256chr8_99886268_-ENSG00000164919.9ENST00000518171hsa-miR-139-5p99886265998862717mer-m89988626499886286162.00-21.01
CAediting_653257chr8_99886278_-ENSG00000164919.9ENST00000518171hsa-miR-2682-3p99886276998862827mer-m89988627599886297147.00-16.46
CAediting_653257chr8_99886278_-ENSG00000164919.9ENST00000518171hsa-miR-6781-3p99886276998862827mer-m89988627599886296140.00-13.59
CAediting_653257chr8_99886278_-ENSG00000164919.9ENST00000518171hsa-miR-6819-3p99886275998862817mer-m89988627499886294140.00-14.69
CAediting_653257chr8_99886278_-ENSG00000164919.9ENST00000518171hsa-miR-6849-3p99886273998862797mer-m89988627299886293142.00-16.50
CAediting_653257chr8_99886278_-ENSG00000164919.9ENST00000518171hsa-miR-6877-3p99886275998862817mer-m89988627499886294140.00-20.51
CAediting_653260chr8_99886307_-ENSG00000164919.9ENST00000518171hsa-miR-1199-5p99886307998863137mer-m89988630699886325152.00-23.81
CAediting_653260chr8_99886307_-ENSG00000164919.9ENST00000518171hsa-miR-125a-5p99886305998863117mer-m89988630499886327142.00-19.28
CAediting_653260chr8_99886307_-ENSG00000164919.9ENST00000518171hsa-miR-125b-5p99886305998863117mer-m89988630499886325142.00-18.42
CAediting_653260chr8_99886307_-ENSG00000164919.9ENST00000518171hsa-miR-125b-5p99886305998863117mer-m89988630499886325142.00-18.42
CAediting_653260chr8_99886307_-ENSG00000164919.9ENST00000518171hsa-miR-331-3p99886303998863097mer-1a9988630399886323144.00-24.68
CAediting_653260chr8_99886307_-ENSG00000164919.9ENST00000518171hsa-miR-431999886305998863117mer-m89988630499886320145.00-18.55
CAediting_653260chr8_99886307_-ENSG00000164919.9ENST00000518171hsa-miR-6751-3p99886307998863137mer-m89988630699886326145.00-13.99
CAediting_653262chr8_99886314_-ENSG00000164919.9ENST00000518171hsa-miR-1247-3p99886312998863187mer-m89988631199886333164.00-28.44
CAediting_653262chr8_99886314_-ENSG00000164919.9ENST00000518171hsa-miR-3940-3p99886310998863167mer-m89988630999886330140.00-14.50
CAediting_653268chr8_99886364_-ENSG00000164919.9ENST00000518171hsa-miR-153899886360998863667mer-m89988635999886381147.00-26.07
CAediting_653268chr8_99886364_-ENSG00000164919.9ENST00000518171hsa-miR-4745-3p99886360998863667mer-m89988635999886382144.00-24.61

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_653257chr8_99886278_-ENSG00000164919.9ENST00000518171hsa-miR-103a-1-5p99886276998862827mer-m89988627599886296152-16.92
CAediting_653258chr8_99886281_-ENSG00000164919.9ENST00000518171hsa-miR-103a-1-5p99886276998862827mer-m89988627599886296152-16.92
CAediting_653257chr8_99886278_-ENSG00000164919.9ENST00000518171hsa-miR-103a-2-5p99886276998862827mer-m89988627599886296152-17.8
CAediting_653258chr8_99886281_-ENSG00000164919.9ENST00000518171hsa-miR-103a-2-5p99886276998862827mer-m89988627599886296152-17.8
CAediting_653252chr8_99886218_-ENSG00000164919.9ENST00000518171hsa-miR-10a-5p99886214998862207mer-m89988621399886235145-13.67
CAediting_653252chr8_99886218_-ENSG00000164919.9ENST00000518171hsa-miR-10b-5p99886214998862207mer-m89988621399886235140-12.49
CAediting_653248chr8_99886160_-ENSG00000164919.9ENST00000518171hsa-miR-1211499886157998861637mer-m89988615699886174145-16.33
CAediting_653268chr8_99886364_-ENSG00000164919.9ENST00000518171hsa-miR-1234-3p99886359998863657mer-m89988635899886379140-15.28
CAediting_653267chr8_99886349_-ENSG00000164919.9ENST00000518171hsa-miR-139-5p99886348998863536mer9988634799886369143-19.99
CAediting_653260chr8_99886307_-ENSG00000164919.9ENST00000518171hsa-miR-188-5p99886302998863087mer-m89988630199886323152-23.08
CAediting_653252chr8_99886218_-ENSG00000164919.9ENST00000518171hsa-miR-339-5p99886215998862217mer-m89988621499886237152-17.69
CAediting_653262chr8_99886314_-ENSG00000164919.9ENST00000518171hsa-miR-3689a-3p99886314998863207mer-m89988631399886333151-22.95
CAediting_653263chr8_99886322_-ENSG00000164919.9ENST00000518171hsa-miR-377-5p99886317998863237mer-m89988631699886339149-16.28
CAediting_653254chr8_99886250_-ENSG00000164919.9ENST00000518171hsa-miR-3934-5p99886246998862527mer-m89988624599886266152-25.71
CAediting_653252chr8_99886218_-ENSG00000164919.9ENST00000518171hsa-miR-442199886216998862227mer-m89988621599886236154-16.06
CAediting_653259chr8_99886290_-ENSG00000164919.9ENST00000518171hsa-miR-447899886286998862927mer-m89988628599886300149-23.48
CAediting_653250chr8_99886205_-ENSG00000164919.9ENST00000518171hsa-miR-451799886202998862087mer-1a9988620299886226144-16.99
CAediting_653259chr8_99886290_-ENSG00000164919.9ENST00000518171hsa-miR-4649-3p99886289998862957mer-m89988628899886308147-20.55
CAediting_653248chr8_99886160_-ENSG00000164919.9ENST00000518171hsa-miR-4804-5p99886160998861667mer-m89988615999886179151-19.65
CAediting_653259chr8_99886290_-ENSG00000164919.9ENST00000518171hsa-miR-485-5p99886285998862917mer-m89988628499886306153-18.53
CAediting_653250chr8_99886205_-ENSG00000164919.9ENST00000518171hsa-miR-5583-3p99886202998862098mer-1a9988620299886224147-10.58
CAediting_653250chr8_99886205_-ENSG00000164919.9ENST00000518171hsa-miR-5583-3p99886202998862098mer-1a9988620299886224147-10.58
CAediting_653252chr8_99886218_-ENSG00000164919.9ENST00000518171hsa-miR-5699-3p99886216998862227mer-m89988621599886236153-17.34
CAediting_653263chr8_99886322_-ENSG00000164919.9ENST00000518171hsa-miR-608699886317998863237mer-m89988631699886334148-26.01
CAediting_653268chr8_99886364_-ENSG00000164919.9ENST00000518171hsa-miR-66199886361998863677mer-m89988636099886382147-18.6
CAediting_653262chr8_99886314_-ENSG00000164919.9ENST00000518171hsa-miR-66199886311998863177mer-m89988631099886334152-24.52
CAediting_653268chr8_99886364_-ENSG00000164919.9ENST00000518171hsa-miR-6742-3p99886362998863687mer-m89988636199886380140-13.49
CAediting_653262chr8_99886314_-ENSG00000164919.9ENST00000518171hsa-miR-6779-5p99886314998863207mer-m89988631399886331148-26.05
CAediting_653262chr8_99886314_-ENSG00000164919.9ENST00000518171hsa-miR-6780a-5p99886314998863207mer-m89988631399886337147-26.28
CAediting_653264chr8_99886333_-ENSG00000164919.9ENST00000518171hsa-miR-6807-5p99886333998863397mer-m89988633299886352142-18.31
CAediting_653252chr8_99886218_-ENSG00000164919.9ENST00000518171hsa-miR-6818-3p99886218998862247mer-m89988621799886238140-11.1
CAediting_653262chr8_99886314_-ENSG00000164919.9ENST00000518171hsa-miR-6852-5p99886312998863176mer9988631199886331140-23.85
CAediting_653260chr8_99886307_-ENSG00000164919.9ENST00000518171hsa-miR-6866-3p99886302998863087mer-m89988630199886323149-17.28
CAediting_653259chr8_99886290_-ENSG00000164919.9ENST00000518171hsa-miR-7160-5p99886288998862947mer-m89988628799886306144-20
CAediting_653248chr8_99886160_-ENSG00000164919.9ENST00000518171hsa-miR-807199886158998861647mer-m89988615799886175149-20.96
CAediting_653248chr8_99886160_-ENSG00000164919.9ENST00000518171hsa-miR-807199886158998861647mer-m89988615799886175149-20.96
CAediting_653258chr8_99886281_-ENSG00000164919.9ENST00000518171hsa-miR-887-5p99886281998862877mer-m89988628099886299143-19.73

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_117844chr1_162342605_+ENSG00000164919.9ENST00000523016hsa-miR-556-3p99887484998874907mer-m89988748399887504152-10.11

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for COX6C

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.
ENST00000518171.4protein_codingSoverviewSoverview

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI
CAediting_653245ENST00000518171.4chr8_99886012_--235.80-236.60-272.10
CAediting_653246ENST00000518171.4chr8_99886133_--237.60-236.60-272.10
CAediting_653247ENST00000518171.4chr8_99886145_--242.80-236.60-272.10
CAediting_653248ENST00000518171.4chr8_99886160_--239.70-236.60-272.10
CAediting_653249ENST00000518171.4chr8_99886202_--240.20-236.60-272.10
CAediting_653250ENST00000518171.4chr8_99886205_--237.50-236.60-272.10
CAediting_653251ENST00000518171.4chr8_99886210_--237.50-236.60-272.10
CAediting_653252ENST00000518171.4chr8_99886218_--237.40-236.60-272.10
CAediting_653253ENST00000518171.4chr8_99886227_--238.30-236.60-272.10
CAediting_653254ENST00000518171.4chr8_99886250_--239.70-236.60-272.10
CAediting_653255ENST00000518171.4chr8_99886266_--237.10-236.60-272.10
CAediting_653256ENST00000518171.4chr8_99886268_--236.90-236.60-272.10
CAediting_653257ENST00000518171.4chr8_99886278_--242.30-236.60-272.10
CAediting_653258ENST00000518171.4chr8_99886281_--242.10-236.60-272.10
CAediting_653259ENST00000518171.4chr8_99886290_--236.60-236.60-272.10
CAediting_653260ENST00000518171.4chr8_99886307_--237.80-236.60-272.10
CAediting_653261ENST00000518171.4chr8_99886308_--239.90-236.60-272.10
CAediting_653262ENST00000518171.4chr8_99886314_--235.90-236.60-272.10
CAediting_653263ENST00000518171.4chr8_99886322_--236.30-236.60-272.10
CAediting_653264ENST00000518171.4chr8_99886333_--236.20-236.60-272.10
CAediting_653265ENST00000518171.4chr8_99886340_--236.60-236.60-272.10
CAediting_653266ENST00000518171.4chr8_99886343_--238.20-236.60-272.10
CAediting_653267ENST00000518171.4chr8_99886349_--236.20-236.60-272.10
CAediting_653268ENST00000518171.4chr8_99886364_--235.80-236.60-272.10
CAediting_653269ENST00000518171.4chr8_99886368_--237.60-236.60-272.10

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Relation with ADAR for COX6C

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
BRCACAediting_653205chr8_99884651_-0.02564012598257340.196476259988416....
BRCACAediting_653207chr8_99884679_-..3.61735729482543e-050.343962774855259..
BRCACAediting_653208chr8_99884689_-0.01592059327405220.217871527504964....
BRCACAediting_653220chr8_99884766_-0.024993211702260.277915415191041....
BRCACAediting_653238chr8_99885381_-1.90900322731185e-050.341385056828169....
BRCACAediting_653239chr8_99885382_-6.21397169807133e-070.333654399174673....
BRCACAediting_653267chr8_99886349_-..0.01654057254537170.21069945553345..

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Relation with cancer stages for COX6C

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.
BRCApathologic_stageCAediting_653205chr8_99884651_-0.02820148106047230.196337458106138

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Relation with survival for COX6C

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR
BRCACAediting_653267chr8_99886349_-0.01651519777973710.01297952524770000

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RelatedDrugs for COX6C

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status
COX6CP09669DB02659Cholic AcidCytochrome c oxidase subunit 6C SmallMoleculeDrugapproved

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RelatedDiseases for COX6C

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource