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Editing gene: LSM11 (CAeditome ID:134353)

Gene summary for LSM11

Gene summary

Gene information	Gene symbol	LSM11
	Gene ID	134353
	Gene name	LSM11, U7 small nuclear RNA associated
	Synonyms	-
	Cytomap	5q33.3
	Type of gene	protein-coding
	Description	U7 snRNA-associated Sm-like protein LSm11
	Modification date	20210518
	UniProtAcc	P83369
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
LSM11	GO:0071209	U7 snRNA-associated Sm-like protein LSm11	12975319
LSM11	GO:0005634	U7 snRNA-associated Sm-like protein LSm11	12975319
LSM11	GO:0005654	U7 snRNA-associated Sm-like protein LSm11	0000052
LSM11	GO:0016604	U7 snRNA-associated Sm-like protein LSm11	0000052
LSM11	GO:0005683	U7 snRNA-associated Sm-like protein LSm11	11574479
LSM11	GO:0005697	U7 snRNA-associated Sm-like protein LSm11	18082603

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RNA A-to-I events for LSM11

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000155858.5

RNA A-to-I editing events in Cancer.

CAediting_444043(157756890, +), CAediting_444044(157756904, +), CAediting_444045(157756912, +), CAediting_444046(157756913, +), CAediting_444047(157756951, +), CAediting_444048(157756965, +), CAediting_444049(157756990, +), CAediting_444050(157757004, +), CAediting_444051(157757005, +), CAediting_444052(157757006, +), CAediting_444053(157757007, +), CAediting_444054(157757010, +), CAediting_444055(157757015, +), CAediting_444056(157757016, +), CAediting_444057(157757045, +), CAediting_444058(157757055, +), CAediting_444059(157757072, +), CAediting_444060(157757075, +), CAediting_444061(157757078, +), CAediting_444062(157757087, +), CAediting_444063(157757094, +), CAediting_444064(157757107, +), CAediting_444065(157757154, +), CAediting_444066(157757172, +), CAediting_444067(157758110, +), CAediting_444068(157758184, +), CAediting_444069(157758194, +), CAediting_444070(157758195, +), CAediting_444071(157758208, +), CAediting_444072(157758219, +), CAediting_444073(157758280, +), CAediting_444074(157758289, +), CAediting_444075(157758294, +), CAediting_444076(157758303, +), CAediting_444077(157758315, +), CAediting_444078(157758327, +), CAediting_444079(157758328, +), CAediting_444080(157758335, +), CAediting_444081(157758349, +), CAediting_444082(157758358, +), CAediting_444083(157758366, +), CAediting_444084(157758368, +), CAediting_444085(157758380, +),

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RNA editing positional annotations for LSM11 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_444043	chr5_157756890_+	UTR3
CAediting_444044	chr5_157756904_+	UTR3
CAediting_444045	chr5_157756912_+	UTR3
CAediting_444046	chr5_157756913_+	UTR3
CAediting_444047	chr5_157756951_+	UTR3
CAediting_444048	chr5_157756965_+	UTR3
CAediting_444049	chr5_157756990_+	UTR3
CAediting_444050	chr5_157757004_+	UTR3
CAediting_444051	chr5_157757005_+	UTR3
CAediting_444052	chr5_157757006_+	UTR3
CAediting_444053	chr5_157757007_+	UTR3
CAediting_444054	chr5_157757010_+	UTR3
CAediting_444055	chr5_157757015_+	UTR3
CAediting_444056	chr5_157757016_+	UTR3
CAediting_444057	chr5_157757045_+	UTR3
CAediting_444058	chr5_157757055_+	UTR3
CAediting_444059	chr5_157757072_+	UTR3
CAediting_444060	chr5_157757075_+	UTR3
CAediting_444061	chr5_157757078_+	UTR3
CAediting_444062	chr5_157757087_+	UTR3
CAediting_444063	chr5_157757094_+	UTR3
CAediting_444064	chr5_157757107_+	UTR3
CAediting_444065	chr5_157757154_+	UTR3
CAediting_444066	chr5_157757172_+	UTR3
CAediting_444067	chr5_157758110_+	UTR3
CAediting_444068	chr5_157758184_+	UTR3
CAediting_444069	chr5_157758194_+	UTR3
CAediting_444070	chr5_157758195_+	UTR3
CAediting_444071	chr5_157758208_+	UTR3
CAediting_444072	chr5_157758219_+	UTR3
CAediting_444073	chr5_157758280_+	UTR3
CAediting_444074	chr5_157758289_+	UTR3
CAediting_444075	chr5_157758294_+	UTR3
CAediting_444076	chr5_157758303_+	UTR3
CAediting_444077	chr5_157758315_+	UTR3
CAediting_444078	chr5_157758327_+	UTR3
CAediting_444079	chr5_157758328_+	UTR3
CAediting_444080	chr5_157758335_+	UTR3
CAediting_444081	chr5_157758349_+	UTR3
CAediting_444082	chr5_157758358_+	UTR3
CAediting_444083	chr5_157758366_+	UTR3
CAediting_444084	chr5_157758368_+	UTR3
CAediting_444085	chr5_157758380_+	UTR3

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_444043	chr5_157756890_+	SINE	Alu	AluY
CAediting_444044	chr5_157756904_+	SINE	Alu	AluY
CAediting_444045	chr5_157756912_+	SINE	Alu	AluY
CAediting_444046	chr5_157756913_+	SINE	Alu	AluY
CAediting_444047	chr5_157756951_+	SINE	Alu	AluY
CAediting_444048	chr5_157756965_+	SINE	Alu	AluY
CAediting_444049	chr5_157756990_+	SINE	Alu	AluY
CAediting_444050	chr5_157757004_+	SINE	Alu	AluY
CAediting_444051	chr5_157757005_+	SINE	Alu	AluY
CAediting_444052	chr5_157757006_+	SINE	Alu	AluY
CAediting_444053	chr5_157757007_+	SINE	Alu	AluY
CAediting_444054	chr5_157757010_+	SINE	Alu	AluY
CAediting_444055	chr5_157757015_+	SINE	Alu	AluY
CAediting_444056	chr5_157757016_+	SINE	Alu	AluY
CAediting_444057	chr5_157757045_+	SINE	Alu	AluY
CAediting_444058	chr5_157757055_+	SINE	Alu	AluY
CAediting_444059	chr5_157757072_+	SINE	Alu	AluY
CAediting_444060	chr5_157757075_+	SINE	Alu	AluY
CAediting_444061	chr5_157757078_+	SINE	Alu	AluY
CAediting_444062	chr5_157757087_+	SINE	Alu	AluY
CAediting_444063	chr5_157757094_+	SINE	Alu	AluY
CAediting_444064	chr5_157757107_+	SINE	Alu	AluY
CAediting_444065	chr5_157757154_+	SINE	Alu	AluY
CAediting_444066	chr5_157757172_+	SINE	Alu	AluY
CAediting_444068	chr5_157758184_+	SINE	Alu	AluSq
CAediting_444069	chr5_157758194_+	SINE	Alu	AluSq
CAediting_444070	chr5_157758195_+	SINE	Alu	AluSq
CAediting_444071	chr5_157758208_+	SINE	Alu	AluSq
CAediting_444072	chr5_157758219_+	SINE	Alu	AluSq
CAediting_444073	chr5_157758280_+	SINE	Alu	AluSq
CAediting_444074	chr5_157758289_+	SINE	Alu	AluSq
CAediting_444075	chr5_157758294_+	SINE	Alu	AluSq
CAediting_444076	chr5_157758303_+	SINE	Alu	AluSq
CAediting_444077	chr5_157758315_+	SINE	Alu	AluSq
CAediting_444078	chr5_157758327_+	SINE	Alu	AluSq
CAediting_444079	chr5_157758328_+	SINE	Alu	AluSq
CAediting_444080	chr5_157758335_+	SINE	Alu	AluSq
CAediting_444081	chr5_157758349_+	SINE	Alu	AluSq
CAediting_444082	chr5_157758358_+	SINE	Alu	AluSq
CAediting_444083	chr5_157758366_+	SINE	Alu	AluSq
CAediting_444084	chr5_157758368_+	SINE	Alu	AluSq
CAediting_444085	chr5_157758380_+	SINE	Alu	AluSq

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RNA A-to-I editing events in the alternative splicing sites for LSM11

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000155858.5.LSM11.

Correlation between RNA A-to-I editing and PSI for ENSG00000155858.5.LSM11.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for LSM11

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for LSM11

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for LSM11

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_444049	chr5_157756990_+	ENSG00000155858.5	ENST00000286307	hsa-miR-3158-3p	157756987	157756993	7mer-m8	157756969	157756994	149.00	-21.54
CAediting_444049	chr5_157756990_+	ENSG00000155858.5	ENST00000286307	hsa-miR-3158-3p	157756987	157756993	7mer-m8	157756969	157756994	149.00	-21.54
CAediting_444049	chr5_157756990_+	ENSG00000155858.5	ENST00000286307	hsa-miR-412-3p	157756983	157756989	7mer-m8	157756968	157756990	151.00	-19.78
CAediting_444049	chr5_157756990_+	ENSG00000155858.5	ENST00000286307	hsa-miR-6754-3p	157756983	157756989	7mer-m8	157756970	157756990	146.00	-16.46
CAediting_444059	chr5_157757072_+	ENSG00000155858.5	ENST00000286307	hsa-miR-6867-3p	157757071	157757077	7mer-1a	157757057	157757077	143.00	-24.81
CAediting_444068	chr5_157758184_+	ENSG00000155858.5	ENST00000286307	hsa-miR-4537	157758181	157758187	7mer-m8	157758166	157758188	151.00	-23.25
CAediting_444071	chr5_157758208_+	ENSG00000155858.5	ENST00000286307	hsa-miR-1247-3p	157758203	157758209	7mer-m8	157758188	157758210	148.00	-21.66
CAediting_444072	chr5_157758219_+	ENSG00000155858.5	ENST00000286307	hsa-miR-589-5p	157758217	157758223	7mer-m8	157758204	157758224	150.00	-15.69
CAediting_444077	chr5_157758315_+	ENSG00000155858.5	ENST00000286307	hsa-miR-3940-3p	157758312	157758318	7mer-m8	157758298	157758319	146.00	-20.09
CAediting_444079	chr5_157758328_+	ENSG00000155858.5	ENST00000286307	hsa-miR-28-5p	157758326	157758332	7mer-m8	157758313	157758333	159.00	-22.83
CAediting_444079	chr5_157758328_+	ENSG00000155858.5	ENST00000286307	hsa-miR-3670	157758324	157758330	7mer-m8	157758308	157758331	154.00	-17.50
CAediting_444079	chr5_157758328_+	ENSG00000155858.5	ENST00000286307	hsa-miR-3670	157758324	157758330	7mer-m8	157758308	157758331	154.00	-17.50
CAediting_444079	chr5_157758328_+	ENSG00000155858.5	ENST00000286307	hsa-miR-3670	157758324	157758330	7mer-m8	157758308	157758331	154.00	-17.50
CAediting_444079	chr5_157758328_+	ENSG00000155858.5	ENST00000286307	hsa-miR-3670	157758324	157758330	7mer-m8	157758308	157758331	154.00	-17.50
CAediting_444079	chr5_157758328_+	ENSG00000155858.5	ENST00000286307	hsa-miR-708-5p	157758326	157758332	7mer-m8	157758312	157758333	158.00	-23.93
CAediting_444083	chr5_157758366_+	ENSG00000155858.5	ENST00000286307	hsa-miR-6771-5p	157758360	157758367	8mer-1a	157758348	157758367	160.00	-30.26
CAediting_444084	chr5_157758368_+	ENSG00000155858.5	ENST00000286307	hsa-miR-3189-3p	157758362	157758368	7mer-m8	157758346	157758369	153.00	-26.36
CAediting_444084	chr5_157758368_+	ENSG00000155858.5	ENST00000286307	hsa-miR-6813-3p	157758363	157758369	7mer-m8	157758350	157758370	140.00	-11.59
CAediting_444085	chr5_157758380_+	ENSG00000155858.5	ENST00000286307	hsa-miR-106a-3p	157758376	157758381	6mer	157758361	157758382	141.00	-21.13
CAediting_444044	chr5_157756904_+	ENSG00000155858.5	ENST00000286307	hsa-miR-4634	157756901	157756907	7mer-m8	157756890	157756908	150.00	-23.29
CAediting_444045	chr5_157756912_+	ENSG00000155858.5	ENST00000286307	hsa-miR-513a-5p	157756906	157756912	7mer-m8	157756896	157756913	144.00	-16.68
CAediting_444045	chr5_157756912_+	ENSG00000155858.5	ENST00000286307	hsa-miR-513a-5p	157756906	157756912	7mer-m8	157756896	157756913	144.00	-16.68
CAediting_444045	chr5_157756912_+	ENSG00000155858.5	ENST00000286307	hsa-miR-638	157756911	157756917	7mer-1a	157756893	157756917	159.00	-35.56
CAediting_444046	chr5_157756913_+	ENSG00000155858.5	ENST00000286307	hsa-miR-8052	157756911	157756917	7mer-1a	157756899	157756917	140.00	-24.15
CAediting_444047	chr5_157756951_+	ENSG00000155858.5	ENST00000286307	hsa-miR-10a-5p	157756947	157756953	7mer-m8	157756933	157756954	157.00	-24.60
CAediting_444047	chr5_157756951_+	ENSG00000155858.5	ENST00000286307	hsa-miR-10b-5p	157756947	157756953	7mer-m8	157756933	157756954	149.00	-19.81
CAediting_444047	chr5_157756951_+	ENSG00000155858.5	ENST00000286307	hsa-miR-146b-3p	157756946	157756952	7mer-m8	157756929	157756953	147.00	-23.67
CAediting_444047	chr5_157756951_+	ENSG00000155858.5	ENST00000286307	hsa-miR-4679	157756944	157756950	7mer-m8	157756930	157756951	144.00	-14.39
CAediting_444047	chr5_157756951_+	ENSG00000155858.5	ENST00000286307	hsa-miR-4679	157756944	157756950	7mer-m8	157756930	157756951	144.00	-14.39
CAediting_444047	chr5_157756951_+	ENSG00000155858.5	ENST00000286307	hsa-miR-4725-5p	157756948	157756955	8mer-1a	157756935	157756955	150.00	-24.04
CAediting_444047	chr5_157756951_+	ENSG00000155858.5	ENST00000286307	hsa-miR-504-5p	157756948	157756955	8mer-1a	157756934	157756955	154.00	-20.79
CAediting_444050	chr5_157757004_+	ENSG00000155858.5	ENST00000286307	hsa-miR-222-5p	157756998	157757005	8mer-1a	157756982	157757005	146.00	-14.17
CAediting_444050	chr5_157757004_+	ENSG00000155858.5	ENST00000286307	hsa-miR-30a-3p	157757000	157757007	8mer-1a	157756983	157757007	150.00	-10.49
CAediting_444050	chr5_157757004_+	ENSG00000155858.5	ENST00000286307	hsa-miR-30d-3p	157757000	157757007	8mer-1a	157756982	157757007	147.00	-13.22
CAediting_444050	chr5_157757004_+	ENSG00000155858.5	ENST00000286307	hsa-miR-30e-3p	157757000	157757007	8mer-1a	157756983	157757007	150.00	-11.75
CAediting_444050	chr5_157757004_+	ENSG00000155858.5	ENST00000286307	hsa-miR-936	157756997	157757004	8mer-1a	157756982	157757004	159.00	-26.12
CAediting_444051	chr5_157757005_+	ENSG00000155858.5	ENST00000286307	hsa-miR-325	157756998	157757005	8mer-1a	157756983	157757005	141.00	-12.77
CAediting_444052	chr5_157757006_+	ENSG00000155858.5	ENST00000286307	hsa-miR-630	157757004	157757011	8mer-1a	157756990	157757011	157.00	-16.15
CAediting_444054	chr5_157757010_+	ENSG00000155858.5	ENST00000286307	hsa-miR-3680-3p	157757007	157757014	8mer-1a	157756992	157757014	140.00	-13.99
CAediting_444054	chr5_157757010_+	ENSG00000155858.5	ENST00000286307	hsa-miR-3680-3p	157757007	157757014	8mer-1a	157756992	157757014	140.00	-13.99
CAediting_444055	chr5_157757015_+	ENSG00000155858.5	ENST00000286307	hsa-miR-6844	157757009	157757015	7mer-m8	157756995	157757016	155.00	-7.49
CAediting_444057	chr5_157757045_+	ENSG00000155858.5	ENST00000286307	hsa-miR-140-3p	157757040	157757046	7mer-m8	157757024	157757047	148.00	-28.72
CAediting_444058	chr5_157757055_+	ENSG00000155858.5	ENST00000286307	hsa-miR-1207-3p	157757048	157757054	7mer-m8	157757037	157757055	145.00	-13.53
CAediting_444060	chr5_157757075_+	ENSG00000155858.5	ENST00000286307	hsa-miR-6752-3p	157757068	157757074	7mer-m8	157757056	157757075	149.00	-25.31
CAediting_444060	chr5_157757075_+	ENSG00000155858.5	ENST00000286307	hsa-miR-6801-3p	157757069	157757076	8mer-1a	157757055	157757076	151.00	-24.94
CAediting_444060	chr5_157757075_+	ENSG00000155858.5	ENST00000286307	hsa-miR-6810-3p	157757069	157757076	8mer-1a	157757053	157757076	147.00	-27.90
CAediting_444061	chr5_157757078_+	ENSG00000155858.5	ENST00000286307	hsa-miR-4286	157757076	157757082	7mer-m8	157757065	157757083	147.00	-21.99
CAediting_444061	chr5_157757078_+	ENSG00000155858.5	ENST00000286307	hsa-miR-4639-3p	157757073	157757079	7mer-m8	157757064	157757080	146.00	-18.62
CAediting_444061	chr5_157757078_+	ENSG00000155858.5	ENST00000286307	hsa-miR-6777-3p	157757074	157757080	7mer-m8	157757062	157757081	164.00	-31.52
CAediting_444062	chr5_157757087_+	ENSG00000155858.5	ENST00000286307	hsa-miR-4284	157757082	157757088	7mer-m8	157757072	157757089	148.00	-23.05
CAediting_444062	chr5_157757087_+	ENSG00000155858.5	ENST00000286307	hsa-miR-4437	157757083	157757089	7mer-m8	157757070	157757090	140.00	-15.06
CAediting_444063	chr5_157757094_+	ENSG00000155858.5	ENST00000286307	hsa-miR-5587-3p	157757087	157757093	7mer-m8	157757072	157757094	141.00	-21.00
CAediting_444063	chr5_157757094_+	ENSG00000155858.5	ENST00000286307	hsa-miR-6840-5p	157757088	157757094	7mer-m8	157757072	157757095	145.00	-25.75
CAediting_444064	chr5_157757107_+	ENSG00000155858.5	ENST00000286307	hsa-miR-6784-3p	157757106	157757111	6mer	157757090	157757112	147.00	-30.55
CAediting_444066	chr5_157757172_+	ENSG00000155858.5	ENST00000286307	hsa-miR-204-5p	157757168	157757175	8mer-1a	157757154	157757175	142.00	-10.74
CAediting_444066	chr5_157757172_+	ENSG00000155858.5	ENST00000286307	hsa-miR-211-5p	157757168	157757175	8mer-1a	157757154	157757175	142.00	-10.74
CAediting_444066	chr5_157757172_+	ENSG00000155858.5	ENST00000286307	hsa-miR-4446-5p	157757170	157757177	8mer-1a	157757156	157757177	140.00	-12.75
CAediting_444066	chr5_157757172_+	ENSG00000155858.5	ENST00000286307	hsa-miR-4755-5p	157757169	157757176	8mer-1a	157757147	157757176	147.00	-23.04
CAediting_444066	chr5_157757172_+	ENSG00000155858.5	ENST00000286307	hsa-miR-5006-3p	157757169	157757176	8mer-1a	157757156	157757176	145.00	-18.03
CAediting_444066	chr5_157757172_+	ENSG00000155858.5	ENST00000286307	hsa-miR-6832-3p	157757167	157757174	8mer-1a	157757155	157757174	145.00	-11.04
CAediting_444070	chr5_157758195_+	ENSG00000155858.5	ENST00000286307	hsa-miR-10394-5p	157758188	157758194	7mer-m8	157758172	157758195	154.00	-24.29
CAediting_444070	chr5_157758195_+	ENSG00000155858.5	ENST00000286307	hsa-miR-1205	157758188	157758194	7mer-m8	157758176	157758195	145.00	-22.21
CAediting_444075	chr5_157758294_+	ENSG00000155858.5	ENST00000286307	hsa-miR-3183	157758288	157758294	7mer-m8	157758274	157758295	140.00	-13.44
CAediting_444075	chr5_157758294_+	ENSG00000155858.5	ENST00000286307	hsa-miR-4640-3p	157758292	157758298	7mer-m8	157758278	157758299	157.00	-19.40
CAediting_444075	chr5_157758294_+	ENSG00000155858.5	ENST00000286307	hsa-miR-4723-3p	157758288	157758294	7mer-m8	157758275	157758295	142.00	-17.74
CAediting_444075	chr5_157758294_+	ENSG00000155858.5	ENST00000286307	hsa-miR-6769b-3p	157758288	157758294	7mer-m8	157758275	157758295	142.00	-17.49
CAediting_444075	chr5_157758294_+	ENSG00000155858.5	ENST00000286307	hsa-miR-6892-3p	157758289	157758295	7mer-m8	157758276	157758296	140.00	-16.14
CAediting_444076	chr5_157758303_+	ENSG00000155858.5	ENST00000286307	hsa-miR-4445-3p	157758300	157758306	7mer-m8	157758287	157758307	150.00	-18.55
CAediting_444076	chr5_157758303_+	ENSG00000155858.5	ENST00000286307	hsa-miR-548al	157758300	157758306	7mer-m8	157758284	157758307	155.00	-19.01
CAediting_444078	chr5_157758327_+	ENSG00000155858.5	ENST00000286307	hsa-miR-1289	157758325	157758331	7mer-m8	157758311	157758332	162.00	-24.98
CAediting_444078	chr5_157758327_+	ENSG00000155858.5	ENST00000286307	hsa-miR-1289	157758325	157758331	7mer-m8	157758311	157758332	162.00	-24.98
CAediting_444080	chr5_157758335_+	ENSG00000155858.5	ENST00000286307	hsa-miR-3922-5p	157758333	157758339	7mer-m8	157758318	157758340	164.00	-23.54
CAediting_444080	chr5_157758335_+	ENSG00000155858.5	ENST00000286307	hsa-miR-4753-5p	157758332	157758338	7mer-m8	157758317	157758339	147.00	-23.18
CAediting_444080	chr5_157758335_+	ENSG00000155858.5	ENST00000286307	hsa-miR-665	157758328	157758334	7mer-m8	157758316	157758335	157.00	-22.68
CAediting_444081	chr5_157758349_+	ENSG00000155858.5	ENST00000286307	hsa-miR-3937	157758346	157758352	7mer-m8	157758332	157758353	150.00	-20.91

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_444045	chr5_157756912_+	ENSG00000155858.5	ENST00000286307	hsa-miR-10399-5p	157756907	157756913	7mer-m8	157756893	157756914	144	-11.21
CAediting_444046	chr5_157756913_+	ENSG00000155858.5	ENST00000286307	hsa-miR-10399-5p	157756907	157756913	7mer-m8	157756893	157756914	144	-11.21
CAediting_444081	chr5_157758349_+	ENSG00000155858.5	ENST00000286307	hsa-miR-12114	157758345	157758351	7mer-m8	157758333	157758352	144	-23.96
CAediting_444043	chr5_157756890_+	ENSG00000155858.5	ENST00000286307	hsa-miR-1271-3p	157756888	157756894	7mer-m8	157756875	157756895	141	-15.64
CAediting_444063	chr5_157757094_+	ENSG00000155858.5	ENST00000286307	hsa-miR-1281	157757091	157757097	7mer-m8	157757082	157757098	141	-16.88
CAediting_444059	chr5_157757072_+	ENSG00000155858.5	ENST00000286307	hsa-miR-1976	157757069	157757076	8mer-1a	157757057	157757076	146	-19.34
CAediting_444060	chr5_157757075_+	ENSG00000155858.5	ENST00000286307	hsa-miR-1976	157757069	157757076	8mer-1a	157757057	157757076	146	-19.34
CAediting_444064	chr5_157757107_+	ENSG00000155858.5	ENST00000286307	hsa-miR-2276-3p	157757101	157757107	7mer-m8	157757087	157757108	144	-17.09
CAediting_444043	chr5_157756890_+	ENSG00000155858.5	ENST00000286307	hsa-miR-3064-5p	157756884	157756890	7mer-m8	157756871	157756891	141	-17.29
CAediting_444077	chr5_157758315_+	ENSG00000155858.5	ENST00000286307	hsa-miR-3064-5p	157758310	157758315	6mer	157758296	157758316	140	-22.62
CAediting_444043	chr5_157756890_+	ENSG00000155858.5	ENST00000286307	hsa-miR-3085-3p	157756884	157756890	7mer-m8	157756871	157756891	147	-14.81
CAediting_444083	chr5_157758366_+	ENSG00000155858.5	ENST00000286307	hsa-miR-30b-3p	157758359	157758366	8mer-1a	157758345	157758366	151	-18.54
CAediting_444075	chr5_157758294_+	ENSG00000155858.5	ENST00000286307	hsa-miR-3127-3p	157758291	157758297	7mer-m8	157758277	157758298	145	-20.54
CAediting_444068	chr5_157758184_+	ENSG00000155858.5	ENST00000286307	hsa-miR-3160-3p	157758181	157758187	7mer-m8	157758167	157758188	150	-21.07
CAediting_444068	chr5_157758184_+	ENSG00000155858.5	ENST00000286307	hsa-miR-3160-3p	157758181	157758187	7mer-m8	157758167	157758188	150	-21.07
CAediting_444081	chr5_157758349_+	ENSG00000155858.5	ENST00000286307	hsa-miR-3165	157758344	157758350	7mer-m8	157758327	157758351	144	-15.14
CAediting_444075	chr5_157758294_+	ENSG00000155858.5	ENST00000286307	hsa-miR-320a-5p	157758289	157758295	7mer-m8	157758275	157758296	147	-13.51
CAediting_444081	chr5_157758349_+	ENSG00000155858.5	ENST00000286307	hsa-miR-3665	157758347	157758353	7mer-m8	157758337	157758354	140	-17.87
CAediting_444071	chr5_157758208_+	ENSG00000155858.5	ENST00000286307	hsa-miR-3689a-3p	157758201	157758207	7mer-m8	157758188	157758208	146	-19.57
CAediting_444083	chr5_157758366_+	ENSG00000155858.5	ENST00000286307	hsa-miR-3689a-3p	157758359	157758366	8mer-1a	157758345	157758366	149	-22.05
CAediting_444071	chr5_157758208_+	ENSG00000155858.5	ENST00000286307	hsa-miR-3689b-3p	157758201	157758207	7mer-m8	157758188	157758208	154	-23.33
CAediting_444083	chr5_157758366_+	ENSG00000155858.5	ENST00000286307	hsa-miR-3689b-3p	157758359	157758366	8mer-1a	157758345	157758366	149	-22.1
CAediting_444071	chr5_157758208_+	ENSG00000155858.5	ENST00000286307	hsa-miR-3689c	157758201	157758207	7mer-m8	157758188	157758208	154	-23.33
CAediting_444083	chr5_157758366_+	ENSG00000155858.5	ENST00000286307	hsa-miR-3689c	157758359	157758366	8mer-1a	157758345	157758366	149	-22.1
CAediting_444080	chr5_157758335_+	ENSG00000155858.5	ENST00000286307	hsa-miR-3974	157758332	157758338	7mer-m8	157758314	157758339	146	-15.66
CAediting_444065	chr5_157757154_+	ENSG00000155858.5	ENST00000286307	hsa-miR-431-5p	157757150	157757156	7mer-m8	157757136	157757157	143	-16.94
CAediting_444064	chr5_157757107_+	ENSG00000155858.5	ENST00000286307	hsa-miR-4418	157757103	157757108	6mer	157757093	157757109	142	-21.8
CAediting_444082	chr5_157758358_+	ENSG00000155858.5	ENST00000286307	hsa-miR-4478	157758355	157758361	7mer-m8	157758347	157758362	149	-22.24
CAediting_444082	chr5_157758358_+	ENSG00000155858.5	ENST00000286307	hsa-miR-4649-3p	157758352	157758358	7mer-m8	157758337	157758359	150	-21
CAediting_444055	chr5_157757015_+	ENSG00000155858.5	ENST00000286307	hsa-miR-4735-5p	157757013	157757019	7mer-m8	157756999	157757020	140	-5.48
CAediting_444056	chr5_157757016_+	ENSG00000155858.5	ENST00000286307	hsa-miR-4735-5p	157757013	157757019	7mer-m8	157756999	157757020	140	-5.48
CAediting_444077	chr5_157758315_+	ENSG00000155858.5	ENST00000286307	hsa-miR-4794	157758309	157758315	7mer-m8	157758294	157758316	147	-21.79
CAediting_444082	chr5_157758358_+	ENSG00000155858.5	ENST00000286307	hsa-miR-485-5p	157758356	157758362	7mer-m8	157758342	157758363	149	-16.01
CAediting_444071	chr5_157758208_+	ENSG00000155858.5	ENST00000286307	hsa-miR-490-3p	157758205	157758211	7mer-m8	157758190	157758212	146	-17.33
CAediting_444069	chr5_157758194_+	ENSG00000155858.5	ENST00000286307	hsa-miR-495-5p	157758191	157758197	7mer-m8	157758177	157758198	140	-11.4
CAediting_444070	chr5_157758195_+	ENSG00000155858.5	ENST00000286307	hsa-miR-495-5p	157758191	157758197	7mer-m8	157758177	157758198	140	-11.4
CAediting_444075	chr5_157758294_+	ENSG00000155858.5	ENST00000286307	hsa-miR-5088-3p	157758290	157758296	7mer-m8	157758276	157758297	146	-16.37
CAediting_444046	chr5_157756913_+	ENSG00000155858.5	ENST00000286307	hsa-miR-5089-5p	157756911	157756917	7mer-m8	157756896	157756918	148	-14.13
CAediting_444043	chr5_157756890_+	ENSG00000155858.5	ENST00000286307	hsa-miR-550a-3-5p	157756888	157756894	7mer-m8	157756874	157756895	147	-16.59
CAediting_444043	chr5_157756890_+	ENSG00000155858.5	ENST00000286307	hsa-miR-550a-5p	157756888	157756894	7mer-m8	157756871	157756895	147	-16.98
CAediting_444043	chr5_157756890_+	ENSG00000155858.5	ENST00000286307	hsa-miR-550a-5p	157756888	157756894	7mer-m8	157756871	157756895	147	-16.98
CAediting_444045	chr5_157756912_+	ENSG00000155858.5	ENST00000286307	hsa-miR-6504-3p	157756907	157756913	7mer-m8	157756893	157756914	148	-14.35
CAediting_444046	chr5_157756913_+	ENSG00000155858.5	ENST00000286307	hsa-miR-6504-3p	157756907	157756913	7mer-m8	157756893	157756914	148	-14.35
CAediting_444043	chr5_157756890_+	ENSG00000155858.5	ENST00000286307	hsa-miR-6504-5p	157756884	157756890	7mer-m8	157756872	157756891	147	-17.22
CAediting_444077	chr5_157758315_+	ENSG00000155858.5	ENST00000286307	hsa-miR-6504-5p	157758310	157758315	6mer	157758295	157758316	142	-16.48
CAediting_444077	chr5_157758315_+	ENSG00000155858.5	ENST00000286307	hsa-miR-664a-5p	157758309	157758315	7mer-m8	157758289	157758316	147	-16.15
CAediting_444059	chr5_157757072_+	ENSG00000155858.5	ENST00000286307	hsa-miR-6747-3p	157757067	157757074	8mer-1a	157757053	157757074	147	-22.85
CAediting_444075	chr5_157758294_+	ENSG00000155858.5	ENST00000286307	hsa-miR-6756-3p	157758291	157758297	7mer-m8	157758279	157758298	143	-16.61
CAediting_444063	chr5_157757094_+	ENSG00000155858.5	ENST00000286307	hsa-miR-6778-3p	157757090	157757096	7mer-m8	157757075	157757097	153	-25.94
CAediting_444071	chr5_157758208_+	ENSG00000155858.5	ENST00000286307	hsa-miR-6779-5p	157758201	157758207	7mer-m8	157758190	157758208	148	-21.48
CAediting_444083	chr5_157758366_+	ENSG00000155858.5	ENST00000286307	hsa-miR-6779-5p	157758359	157758366	8mer-1a	157758348	157758366	148	-23.1
CAediting_444071	chr5_157758208_+	ENSG00000155858.5	ENST00000286307	hsa-miR-6780a-5p	157758201	157758207	7mer-m8	157758188	157758208	153	-23.8
CAediting_444044	chr5_157756904_+	ENSG00000155858.5	ENST00000286307	hsa-miR-6807-5p	157756897	157756903	7mer-m8	157756882	157756904	148	-27.23
CAediting_444049	chr5_157756990_+	ENSG00000155858.5	ENST00000286307	hsa-miR-6823-5p	157756988	157756994	7mer-m8	157756975	157756995	143	-15.09
CAediting_444045	chr5_157756912_+	ENSG00000155858.5	ENST00000286307	hsa-miR-7151-3p	157756905	157756912	8mer-1a	157756892	157756912	144	-16.51
CAediting_444057	chr5_157757045_+	ENSG00000155858.5	ENST00000286307	hsa-miR-7151-3p	157757038	157757044	7mer-m8	157757025	157757045	140	-17.27
CAediting_444068	chr5_157758184_+	ENSG00000155858.5	ENST00000286307	hsa-miR-7160-5p	157758180	157758185	6mer	157758164	157758186	141	-24.47
CAediting_444082	chr5_157758358_+	ENSG00000155858.5	ENST00000286307	hsa-miR-7160-5p	157758353	157758359	7mer-m8	157758343	157758360	144	-18.41
CAediting_444057	chr5_157757045_+	ENSG00000155858.5	ENST00000286307	hsa-miR-8052	157757044	157757050	7mer-1a	157757030	157757050	141	-23.11
CAediting_444083	chr5_157758366_+	ENSG00000155858.5	ENST00000286307	hsa-miR-887-5p	157758360	157758367	8mer-1a	157758348	157758367	143	-15.14
CAediting_444075	chr5_157758294_+	ENSG00000155858.5	ENST00000286307	hsa-miR-942-5p	157758288	157758294	7mer-m8	157758274	157758295	147	-13.87

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_748296	chr10_51299626_+	ENSG00000155858.5	ENST00000286307	hsa-miR-605-3p	157757720	157757726	7mer-m8	157757702	157757727	146	-22.01
CAediting_980496	chr14_31014685_-	ENSG00000155858.5	ENST00000286307	hsa-miR-624-3p	157756989	157756995	7mer-m8	157756974	157756996	153	-14.18
CAediting_980496	chr14_31014685_-	ENSG00000155858.5	ENST00000286307	hsa-miR-624-3p	157756038	157756044	7mer-m8	157756025	157756045	162	-23.76
CAediting_1229413	chr17_67471544_+	ENSG00000155858.5	ENST00000286307	hsa-miR-548aa	157758659	157758665	7mer-m8	157758640	157758666	142	-11.13
CAediting_1229413	chr17_67471544_+	ENSG00000155858.5	ENST00000286307	hsa-miR-548aa	157756216	157756223	8mer-1a	157756199	157756223	145	-9.22
CAediting_1229415	chr17_67471547_+	ENSG00000155858.5	ENST00000286307	hsa-miR-548aa	157759076	157759083	8mer-1a	157759060	157759083	153	-16.23
CAediting_117844	chr1_162342605_+	ENSG00000155858.5	ENST00000286307	hsa-miR-556-3p	157756436	157756442	7mer-m8	157756420	157756443	145	-13.05
CAediting_228905	chr2_188297554_+	ENSG00000155858.5	ENST00000286307	hsa-miR-561-3p	157755340	157755346	7mer-m8	157755322	157755347	147	-12.62
CAediting_604450	chr7_133034877_-	ENSG00000155858.5	ENST00000286307	hsa-miR-3654	157756113	157756119	7mer-m8	157756104	157756120	150	-19.49
CAediting_524911	chr7_5495852_-	ENSG00000155858.5	ENST00000286307	hsa-miR-589-3p	157755867	157755873	7mer-m8	157755848	157755874	155	-18.61

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_573001	chr7_92204086_-	ENSG00000155858.5	ENST00000286307	hsa-miR-1285-5p	157759037	157759043	7mer-m8	157759021	157759044	144	-16.68
CAediting_442554	chr5_154685830_+	ENSG00000155858.5	ENST00000286307	hsa-miR-1303	157756764	157756771	8mer-1a	157756750	157756771	152	-16.95
CAediting_442554	chr5_154685830_+	ENSG00000155858.5	ENST00000286307	hsa-miR-1303	157759457	157759464	8mer-1a	157759443	157759464	140	-9.85
CAediting_1160181	chr17_7017644_-	ENSG00000155858.5	ENST00000286307	hsa-miR-195-3p	157756439	157756446	8mer-1a	157756425	157756446	153	-16.32
CAediting_393	chr1_1167164_+	ENSG00000155858.5	ENST00000286307	hsa-miR-200b-3p	157759893	157759899	7mer-m8	157759880	157759900	148	-9.98
CAediting_1368054	chr19_46709310_-	ENSG00000155858.5	ENST00000286307	hsa-miR-320e	157756115	157756121	7mer-m8	157756104	157756122	149	-20.64
CAediting_77128	chr1_85133844_+	ENSG00000155858.5	ENST00000286307	hsa-miR-4423-3p	157757817	157757823	7mer-m8	157757804	157757824	145	-10.66
CAediting_1524209	chrX_134546392_-	ENSG00000155858.5	ENST00000286307	hsa-miR-503-5p	157757340	157757345	6mer	157757324	157757346	141	-16.71
CAediting_1229413	chr17_67471544_+	ENSG00000155858.5	ENST00000286307	hsa-miR-548aa	157756468	157756475	8mer-1a	157756452	157756475	148	-6.47
CAediting_1229414	chr17_67471546_+	ENSG00000155858.5	ENST00000286307	hsa-miR-548aa	157756468	157756475	8mer-1a	157756452	157756475	148	-6.47
CAediting_1229415	chr17_67471547_+	ENSG00000155858.5	ENST00000286307	hsa-miR-548aa	157756468	157756475	8mer-1a	157756452	157756475	148	-6.47
CAediting_1229413	chr17_67471544_+	ENSG00000155858.5	ENST00000286307	hsa-miR-548aa	157755282	157755288	7mer-m8	157755265	157755289	145	-13.44
CAediting_1229414	chr17_67471546_+	ENSG00000155858.5	ENST00000286307	hsa-miR-548aa	157755282	157755288	7mer-m8	157755265	157755289	145	-13.44
CAediting_1229415	chr17_67471547_+	ENSG00000155858.5	ENST00000286307	hsa-miR-548aa	157755282	157755288	7mer-m8	157755265	157755289	145	-13.44
CAediting_117844	chr1_162342605_+	ENSG00000155858.5	ENST00000286307	hsa-miR-556-3p	157756143	157756149	7mer-m8	157756131	157756150	151	-9.62
CAediting_228905	chr2_188297554_+	ENSG00000155858.5	ENST00000286307	hsa-miR-561-3p	157756541	157756547	7mer-m8	157756527	157756548	140	-3.7
CAediting_228905	chr2_188297554_+	ENSG00000155858.5	ENST00000286307	hsa-miR-561-3p	157757401	157757406	6mer	157757384	157757407	140	-8.07
CAediting_1351755	chr19_40282625_-	ENSG00000155858.5	ENST00000286307	hsa-miR-641	157756833	157756838	6mer	157756816	157756839	145	-17.94
CAediting_1351755	chr19_40282625_-	ENSG00000155858.5	ENST00000286307	hsa-miR-641	157760366	157760372	7mer-m8	157760350	157760373	146	-12.11
CAediting_468389	chr6_31355314_-	ENSG00000155858.5	ENST00000286307	hsa-miR-6891-5p	157759880	157759886	7mer-m8	157759869	157759887	140	-12.43

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for LSM11

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000286307.5	protein_coding

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_444043	ENST00000286307.5	chr5_157756890_+	-2284.00	-2277.90	-2283.40
CAediting_444044	ENST00000286307.5	chr5_157756904_+	-2277.50	-2277.90	-2283.40
CAediting_444045	ENST00000286307.5	chr5_157756912_+	-2278.00	-2277.90	-2283.40
CAediting_444046	ENST00000286307.5	chr5_157756913_+	-2277.90	-2277.90	-2283.40
CAediting_444047	ENST00000286307.5	chr5_157756951_+	-2277.60	-2277.90	-2283.40
CAediting_444048	ENST00000286307.5	chr5_157756965_+	-2277.60	-2277.90	-2283.40
CAediting_444049	ENST00000286307.5	chr5_157756990_+	-2277.90	-2277.90	-2283.40
CAediting_444050	ENST00000286307.5	chr5_157757004_+	-2278.00	-2277.90	-2283.40
CAediting_444051	ENST00000286307.5	chr5_157757005_+	-2278.00	-2277.90	-2283.40
CAediting_444052	ENST00000286307.5	chr5_157757006_+	-2278.00	-2277.90	-2283.40
CAediting_444053	ENST00000286307.5	chr5_157757007_+	-2278.00	-2277.90	-2283.40
CAediting_444054	ENST00000286307.5	chr5_157757010_+	-2277.90	-2277.90	-2283.40
CAediting_444055	ENST00000286307.5	chr5_157757015_+	-2278.00	-2277.90	-2283.40
CAediting_444056	ENST00000286307.5	chr5_157757016_+	-2277.60	-2277.90	-2283.40
CAediting_444057	ENST00000286307.5	chr5_157757045_+	-2278.90	-2277.90	-2283.40
CAediting_444058	ENST00000286307.5	chr5_157757055_+	-2277.90	-2277.90	-2283.40
CAediting_444059	ENST00000286307.5	chr5_157757072_+	-2277.20	-2277.90	-2283.40
CAediting_444060	ENST00000286307.5	chr5_157757075_+	-2277.00	-2277.90	-2283.40
CAediting_444061	ENST00000286307.5	chr5_157757078_+	-2277.90	-2277.90	-2283.40
CAediting_444062	ENST00000286307.5	chr5_157757087_+	-2277.90	-2277.90	-2283.40
CAediting_444063	ENST00000286307.5	chr5_157757094_+	-2277.00	-2277.90	-2283.40
CAediting_444064	ENST00000286307.5	chr5_157757107_+	-2277.20	-2277.90	-2283.40
CAediting_444065	ENST00000286307.5	chr5_157757154_+	-2279.60	-2277.90	-2283.40
CAediting_444066	ENST00000286307.5	chr5_157757172_+	-2278.00	-2277.90	-2283.40
CAediting_444067	ENST00000286307.5	chr5_157758110_+	-2278.00	-2277.90	-2283.40
CAediting_444068	ENST00000286307.5	chr5_157758184_+	-2281.50	-2277.90	-2283.40
CAediting_444069	ENST00000286307.5	chr5_157758194_+	-2277.60	-2277.90	-2283.40
CAediting_444070	ENST00000286307.5	chr5_157758195_+	-2278.30	-2277.90	-2283.40
CAediting_444071	ENST00000286307.5	chr5_157758208_+	-2284.10	-2277.90	-2283.40
CAediting_444072	ENST00000286307.5	chr5_157758219_+	-2278.20	-2277.90	-2283.40
CAediting_444073	ENST00000286307.5	chr5_157758280_+	-2277.90	-2277.90	-2283.40
CAediting_444074	ENST00000286307.5	chr5_157758289_+	-2277.60	-2277.90	-2283.40
CAediting_444075	ENST00000286307.5	chr5_157758294_+	-2280.50	-2277.90	-2283.40
CAediting_444076	ENST00000286307.5	chr5_157758303_+	-2276.90	-2277.90	-2283.40
CAediting_444077	ENST00000286307.5	chr5_157758315_+	-2277.20	-2277.90	-2283.40
CAediting_444078	ENST00000286307.5	chr5_157758327_+	-2276.30	-2277.90	-2283.40
CAediting_444079	ENST00000286307.5	chr5_157758328_+	-2277.90	-2277.90	-2283.40
CAediting_444080	ENST00000286307.5	chr5_157758335_+	-2277.30	-2277.90	-2283.40
CAediting_444081	ENST00000286307.5	chr5_157758349_+	-2277.50	-2277.90	-2283.40
CAediting_444082	ENST00000286307.5	chr5_157758358_+	-2277.20	-2277.90	-2283.40
CAediting_444083	ENST00000286307.5	chr5_157758366_+	-2277.60	-2277.90	-2283.40
CAediting_444084	ENST00000286307.5	chr5_157758368_+	-2277.60	-2277.90	-2283.40
CAediting_444085	ENST00000286307.5	chr5_157758380_+	-2277.90	-2277.90	-2283.40

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Relation with ADAR for LSM11

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
BRCA	CAediting_444074	chr5_157758289_+	8.93032891386042e-06	0.456276438633992	.	.	.	.

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Relation with cancer stages for LSM11

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for LSM11

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for LSM11

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for LSM11

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene