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Editing gene: SGPP2 (CAeditome ID:130367)

Gene summary for SGPP2

Gene summary

Gene information	Gene symbol	SGPP2
	Gene ID	130367
	Gene name	sphingosine-1-phosphate phosphatase 2
	Synonyms	SPP2\|SPPase2
	Cytomap	2q36.1
	Type of gene	protein-coding
	Description	sphingosine-1-phosphate phosphatase 2sphingosine 1-phosphate phosphohydrolase 2sphingosine-1-phosphatase 2sphingosine-1-phosphate phosphotase 2
	Modification date	20210518
	UniProtAcc	Q8IWX5
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
SGPP2	GO:0042392	Sphingosine-1-phosphate phosphatase 2	12411432
SGPP2	GO:0006670	Sphingosine-1-phosphate phosphatase 2	12411432
SGPP2	GO:0005783	Sphingosine-1-phosphate phosphatase 2	12411432

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RNA A-to-I events for SGPP2

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000163082.9

RNA A-to-I editing events in Cancer.

CAediting_244814(222426097, +), CAediting_244815(222426103, +), CAediting_244816(222426107, +), CAediting_244817(222426119, +), CAediting_244818(222426151, +), CAediting_244819(222426160, +), CAediting_244820(222426162, +), CAediting_244821(222426165, +), CAediting_244822(222427284, +), CAediting_244823(222427394, +), CAediting_244824(222428975, +), CAediting_244825(222430508, +), CAediting_244826(222431285, +), CAediting_244827(222431403, +), CAediting_244828(222463354, +), CAediting_244829(222475195, +), CAediting_244830(222475196, +), CAediting_244831(222490452, +), CAediting_244832(222490477, +), CAediting_244833(222490531, +), CAediting_244834(222490549, +), CAediting_244835(222490563, +), CAediting_244836(222490725, +), CAediting_244837(222491204, +), CAediting_244838(222491235, +), CAediting_244839(222493564, +), CAediting_244840(222493598, +), CAediting_244841(222493601, +), CAediting_244842(222505709, +), CAediting_244843(222505755, +), CAediting_244844(222505814, +), CAediting_244845(222514418, +), CAediting_244846(222514433, +), CAediting_244847(222520506, +), CAediting_244848(222520609, +), CAediting_244849(222520610, +), CAediting_244850(222520615, +), CAediting_244851(222520636, +), CAediting_244852(222520637, +), CAediting_244853(222520650, +), CAediting_244854(222520651, +), CAediting_244855(222520773, +), CAediting_244856(222520777, +), CAediting_244857(222520899, +), CAediting_244858(222520901, +), CAediting_244859(222527221, +), CAediting_244860(222527237, +), CAediting_244861(222527250, +), CAediting_244862(222527252, +), CAediting_244863(222527367, +), CAediting_244864(222527443, +), CAediting_244865(222527444, +), CAediting_244866(222528109, +), CAediting_244867(222528124, +), CAediting_244868(222528132, +), CAediting_244869(222528183, +), CAediting_244870(222528199, +), CAediting_244871(222528220, +), CAediting_244872(222528282, +), CAediting_244873(222528648, +), CAediting_244874(222528717, +), CAediting_244875(222528720, +), CAediting_244876(222528729, +), CAediting_244877(222528766, +), CAediting_244878(222528826, +), CAediting_244879(222528837, +), CAediting_244880(222530954, +), CAediting_244881(222531995, +), CAediting_244882(222532034, +), CAediting_244883(222532096, +), CAediting_244884(222532127, +), CAediting_244885(222532131, +), CAediting_244886(222532143, +), CAediting_244887(222532145, +), CAediting_244888(222532153, +), CAediting_244889(222532154, +), CAediting_244890(222532180, +), CAediting_244891(222532194, +), CAediting_244892(222532291, +), CAediting_244893(222559481, +), CAediting_244894(222559488, +), CAediting_244895(222559505, +), CAediting_244896(222559517, +), CAediting_244897(222559523, +), CAediting_244898(222559525, +), CAediting_244899(222559526, +), CAediting_244900(222559531, +), CAediting_244901(222559541, +), CAediting_244902(222559542, +), CAediting_244903(222559543, +), CAediting_244904(222559561, +), CAediting_244905(222559562, +), CAediting_244906(222559565, +), CAediting_244907(222559579, +), CAediting_244908(222559588, +), CAediting_244909(222559591, +), CAediting_244910(222559604, +), CAediting_244911(222559609, +), CAediting_244912(222559614, +), CAediting_244913(222559617, +), CAediting_244914(222559625, +), CAediting_244915(222559629, +), CAediting_244916(222559630, +), CAediting_244917(222559638, +), CAediting_244918(222559640, +), CAediting_244919(222559644, +), CAediting_244920(222559664, +), CAediting_244921(222559668, +), CAediting_244922(222559675, +), CAediting_244923(222559677, +), CAediting_244924(222559694, +), CAediting_244925(222559698, +), CAediting_244926(222559702, +), CAediting_244927(222559707, +), CAediting_244928(222559715, +), CAediting_244929(222559716, +), CAediting_244930(222559717, +), CAediting_244931(222559726, +), CAediting_244932(222559729, +), CAediting_244933(222559731, +), CAediting_244934(222559735, +), CAediting_244935(222559738, +), CAediting_244936(222560844, +), CAediting_244937(222560852, +), CAediting_244938(222560853, +), CAediting_244939(222560858, +), CAediting_244940(222560861, +), CAediting_244941(222560869, +), CAediting_244942(222560885, +), CAediting_244943(222560896, +), CAediting_244944(222560899, +), CAediting_244945(222560920, +),

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RNA editing positional annotations for SGPP2 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_244814	chr2_222426097_+	intronic
CAediting_244815	chr2_222426103_+	intronic
CAediting_244816	chr2_222426107_+	intronic
CAediting_244817	chr2_222426119_+	intronic
CAediting_244818	chr2_222426151_+	intronic
CAediting_244819	chr2_222426160_+	intronic
CAediting_244820	chr2_222426162_+	intronic
CAediting_244821	chr2_222426165_+	intronic
CAediting_244822	chr2_222427284_+	intronic
CAediting_244823	chr2_222427394_+	intronic
CAediting_244824	chr2_222428975_+	intronic
CAediting_244825	chr2_222430508_+	intronic
CAediting_244826	chr2_222431285_+	intronic
CAediting_244827	chr2_222431403_+	intronic
CAediting_244828	chr2_222463354_+	intronic
CAediting_244829	chr2_222475195_+	intronic
CAediting_244830	chr2_222475196_+	intronic
CAediting_244831	chr2_222490452_+	intronic
CAediting_244832	chr2_222490477_+	intronic
CAediting_244833	chr2_222490531_+	intronic
CAediting_244834	chr2_222490549_+	intronic
CAediting_244835	chr2_222490563_+	intronic
CAediting_244836	chr2_222490725_+	intronic
CAediting_244837	chr2_222491204_+	intronic
CAediting_244838	chr2_222491235_+	intronic
CAediting_244839	chr2_222493564_+	intronic
CAediting_244840	chr2_222493598_+	intronic
CAediting_244841	chr2_222493601_+	intronic
CAediting_244842	chr2_222505709_+	intronic
CAediting_244843	chr2_222505755_+	intronic
CAediting_244844	chr2_222505814_+	intronic
CAediting_244845	chr2_222514418_+	intronic
CAediting_244846	chr2_222514433_+	intronic
CAediting_244847	chr2_222520506_+	intronic
CAediting_244848	chr2_222520609_+	intronic
CAediting_244849	chr2_222520610_+	intronic
CAediting_244850	chr2_222520615_+	intronic
CAediting_244851	chr2_222520636_+	intronic
CAediting_244852	chr2_222520637_+	intronic
CAediting_244853	chr2_222520650_+	intronic
CAediting_244854	chr2_222520651_+	intronic
CAediting_244855	chr2_222520773_+	intronic
CAediting_244856	chr2_222520777_+	intronic
CAediting_244857	chr2_222520899_+	intronic
CAediting_244858	chr2_222520901_+	intronic
CAediting_244859	chr2_222527221_+	intronic
CAediting_244860	chr2_222527237_+	intronic
CAediting_244861	chr2_222527250_+	intronic
CAediting_244862	chr2_222527252_+	intronic
CAediting_244863	chr2_222527367_+	intronic
CAediting_244864	chr2_222527443_+	intronic
CAediting_244865	chr2_222527444_+	intronic
CAediting_244866	chr2_222528109_+	intronic
CAediting_244867	chr2_222528124_+	intronic
CAediting_244868	chr2_222528132_+	intronic
CAediting_244869	chr2_222528183_+	intronic
CAediting_244870	chr2_222528199_+	intronic
CAediting_244871	chr2_222528220_+	intronic
CAediting_244872	chr2_222528282_+	intronic
CAediting_244873	chr2_222528648_+	intronic
CAediting_244874	chr2_222528717_+	intronic
CAediting_244875	chr2_222528720_+	intronic
CAediting_244876	chr2_222528729_+	intronic
CAediting_244877	chr2_222528766_+	intronic
CAediting_244878	chr2_222528826_+	intronic
CAediting_244879	chr2_222528837_+	intronic
CAediting_244880	chr2_222530954_+	intronic
CAediting_244881	chr2_222531995_+	intronic
CAediting_244882	chr2_222532034_+	intronic
CAediting_244883	chr2_222532096_+	intronic
CAediting_244884	chr2_222532127_+	intronic
CAediting_244885	chr2_222532131_+	intronic
CAediting_244886	chr2_222532143_+	intronic
CAediting_244887	chr2_222532145_+	intronic
CAediting_244888	chr2_222532153_+	intronic
CAediting_244889	chr2_222532154_+	intronic
CAediting_244890	chr2_222532180_+	intronic
CAediting_244891	chr2_222532194_+	intronic
CAediting_244892	chr2_222532291_+	intronic
CAediting_244893	chr2_222559481_+	UTR3
CAediting_244894	chr2_222559488_+	UTR3
CAediting_244895	chr2_222559505_+	UTR3
CAediting_244896	chr2_222559517_+	UTR3
CAediting_244897	chr2_222559523_+	UTR3
CAediting_244898	chr2_222559525_+	UTR3
CAediting_244899	chr2_222559526_+	UTR3
CAediting_244900	chr2_222559531_+	UTR3
CAediting_244901	chr2_222559541_+	UTR3
CAediting_244902	chr2_222559542_+	UTR3
CAediting_244903	chr2_222559543_+	UTR3
CAediting_244904	chr2_222559561_+	UTR3
CAediting_244905	chr2_222559562_+	UTR3
CAediting_244906	chr2_222559565_+	UTR3
CAediting_244907	chr2_222559579_+	UTR3
CAediting_244908	chr2_222559588_+	UTR3
CAediting_244909	chr2_222559591_+	UTR3
CAediting_244910	chr2_222559604_+	UTR3
CAediting_244911	chr2_222559609_+	UTR3
CAediting_244912	chr2_222559614_+	UTR3
CAediting_244913	chr2_222559617_+	UTR3
CAediting_244914	chr2_222559625_+	UTR3
CAediting_244915	chr2_222559629_+	UTR3
CAediting_244916	chr2_222559630_+	UTR3
CAediting_244917	chr2_222559638_+	UTR3
CAediting_244918	chr2_222559640_+	UTR3
CAediting_244919	chr2_222559644_+	UTR3
CAediting_244920	chr2_222559664_+	UTR3
CAediting_244921	chr2_222559668_+	UTR3
CAediting_244922	chr2_222559675_+	UTR3
CAediting_244923	chr2_222559677_+	UTR3
CAediting_244924	chr2_222559694_+	UTR3
CAediting_244925	chr2_222559698_+	UTR3
CAediting_244926	chr2_222559702_+	UTR3
CAediting_244927	chr2_222559707_+	UTR3
CAediting_244928	chr2_222559715_+	UTR3
CAediting_244929	chr2_222559716_+	UTR3
CAediting_244930	chr2_222559717_+	UTR3
CAediting_244931	chr2_222559726_+	UTR3
CAediting_244932	chr2_222559729_+	UTR3
CAediting_244933	chr2_222559731_+	UTR3
CAediting_244934	chr2_222559735_+	UTR3
CAediting_244935	chr2_222559738_+	UTR3
CAediting_244936	chr2_222560844_+	UTR3
CAediting_244937	chr2_222560852_+	UTR3
CAediting_244938	chr2_222560853_+	UTR3
CAediting_244939	chr2_222560858_+	UTR3
CAediting_244940	chr2_222560861_+	UTR3
CAediting_244941	chr2_222560869_+	UTR3
CAediting_244942	chr2_222560885_+	UTR3
CAediting_244943	chr2_222560896_+	UTR3
CAediting_244944	chr2_222560899_+	UTR3
CAediting_244945	chr2_222560920_+	UTR3

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_244814	chr2_222426097_+	SINE	Alu	AluSx3
CAediting_244815	chr2_222426103_+	SINE	Alu	AluSx3
CAediting_244816	chr2_222426107_+	SINE	Alu	AluSx3
CAediting_244817	chr2_222426119_+	SINE	Alu	AluSx3
CAediting_244818	chr2_222426151_+	SINE	Alu	AluSx3
CAediting_244819	chr2_222426160_+	SINE	Alu	AluSx3
CAediting_244820	chr2_222426162_+	SINE	Alu	AluSx3
CAediting_244821	chr2_222426165_+	SINE	Alu	AluSx3
CAediting_244822	chr2_222427284_+	SINE	Alu	AluJr4
CAediting_244823	chr2_222427394_+	SINE	Alu	AluJr4
CAediting_244824	chr2_222428975_+	SINE	Alu	AluSx
CAediting_244825	chr2_222430508_+	SINE	Alu	FLAM_C
CAediting_244826	chr2_222431285_+	SINE	Alu	AluSz
CAediting_244827	chr2_222431403_+	SINE	Alu	AluSz
CAediting_244828	chr2_222463354_+	SINE	Alu	AluJb
CAediting_244829	chr2_222475195_+	SINE	Alu	AluSx3
CAediting_244830	chr2_222475196_+	SINE	Alu	AluSx3
CAediting_244831	chr2_222490452_+	SINE	Alu	AluJo
CAediting_244832	chr2_222490477_+	SINE	Alu	AluJo
CAediting_244833	chr2_222490531_+	SINE	Alu	AluJo
CAediting_244834	chr2_222490549_+	SINE	Alu	AluJo
CAediting_244835	chr2_222490563_+	SINE	Alu	AluJo
CAediting_244836	chr2_222490725_+	SINE	Alu	AluJo
CAediting_244837	chr2_222491204_+	SINE	Alu	AluJo
CAediting_244838	chr2_222491235_+	SINE	Alu	AluJo
CAediting_244839	chr2_222493564_+	SINE	Alu	AluJo
CAediting_244840	chr2_222493598_+	SINE	Alu	AluJo
CAediting_244841	chr2_222493601_+	SINE	Alu	AluJo
CAediting_244842	chr2_222505709_+	SINE	Alu	AluJb
CAediting_244843	chr2_222505755_+	SINE	Alu	AluJb
CAediting_244844	chr2_222505814_+	SINE	Alu	AluJb
CAediting_244845	chr2_222514418_+	SINE	Alu	FLAM_C
CAediting_244846	chr2_222514433_+	SINE	Alu	FLAM_C
CAediting_244847	chr2_222520506_+	SINE	Alu	AluSx1
CAediting_244848	chr2_222520609_+	SINE	Alu	AluSx1
CAediting_244849	chr2_222520610_+	SINE	Alu	AluSx1
CAediting_244850	chr2_222520615_+	SINE	Alu	AluSx1
CAediting_244851	chr2_222520636_+	SINE	Alu	AluSx1
CAediting_244852	chr2_222520637_+	SINE	Alu	AluSx1
CAediting_244853	chr2_222520650_+	SINE	Alu	AluSx1
CAediting_244854	chr2_222520651_+	SINE	Alu	AluSx1
CAediting_244855	chr2_222520773_+	SINE	Alu	AluJb
CAediting_244856	chr2_222520777_+	SINE	Alu	AluJb
CAediting_244857	chr2_222520899_+	SINE	Alu	AluJb
CAediting_244858	chr2_222520901_+	SINE	Alu	AluJb
CAediting_244859	chr2_222527221_+	DNA	TcMar-Tigger	Tigger1
CAediting_244860	chr2_222527237_+	DNA	TcMar-Tigger	Tigger1
CAediting_244861	chr2_222527250_+	DNA	TcMar-Tigger	Tigger1
CAediting_244862	chr2_222527252_+	DNA	TcMar-Tigger	Tigger1
CAediting_244863	chr2_222527367_+	DNA	TcMar-Tigger	Tigger1
CAediting_244864	chr2_222527443_+	LINE	L1	L1M3
CAediting_244865	chr2_222527444_+	LINE	L1	L1M3
CAediting_244866	chr2_222528109_+	DNA	hAT-Charlie	MER5B
CAediting_244867	chr2_222528124_+	DNA	hAT-Charlie	MER5B
CAediting_244868	chr2_222528132_+	DNA	hAT-Charlie	MER5B
CAediting_244869	chr2_222528183_+	LINE	L1	L1MB3
CAediting_244870	chr2_222528199_+	LINE	L1	L1MB3
CAediting_244871	chr2_222528220_+	LINE	L1	L1MB3
CAediting_244872	chr2_222528282_+	DNA	TcMar-Tigger	Tigger1
CAediting_244873	chr2_222528648_+	SINE	Alu	AluJo
CAediting_244874	chr2_222528717_+	SINE	Alu	AluJo
CAediting_244875	chr2_222528720_+	SINE	Alu	AluJo
CAediting_244876	chr2_222528729_+	SINE	Alu	AluJo
CAediting_244877	chr2_222528766_+	SINE	Alu	AluJo
CAediting_244878	chr2_222528826_+	SINE	Alu	AluJo
CAediting_244879	chr2_222528837_+	SINE	Alu	AluJo
CAediting_244880	chr2_222530954_+	DNA	TcMar-Tigger	Tigger1
CAediting_244881	chr2_222531995_+	SINE	Alu	AluSp
CAediting_244882	chr2_222532034_+	SINE	Alu	AluSp
CAediting_244883	chr2_222532096_+	SINE	Alu	AluSp
CAediting_244884	chr2_222532127_+	SINE	Alu	AluSp
CAediting_244885	chr2_222532131_+	SINE	Alu	AluSp
CAediting_244886	chr2_222532143_+	SINE	Alu	AluSp
CAediting_244887	chr2_222532145_+	SINE	Alu	AluSp
CAediting_244888	chr2_222532153_+	SINE	Alu	AluSp
CAediting_244889	chr2_222532154_+	SINE	Alu	AluSp
CAediting_244890	chr2_222532180_+	SINE	Alu	AluSp
CAediting_244891	chr2_222532194_+	SINE	Alu	AluSp
CAediting_244892	chr2_222532291_+	SINE	Alu	AluSp
CAediting_244893	chr2_222559481_+	SINE	Alu	AluJb
CAediting_244894	chr2_222559488_+	SINE	Alu	AluJb
CAediting_244895	chr2_222559505_+	SINE	Alu	AluJb
CAediting_244896	chr2_222559517_+	SINE	Alu	AluJb
CAediting_244897	chr2_222559523_+	SINE	Alu	AluJb
CAediting_244898	chr2_222559525_+	SINE	Alu	AluJb
CAediting_244899	chr2_222559526_+	SINE	Alu	AluJb
CAediting_244900	chr2_222559531_+	SINE	Alu	AluJb
CAediting_244901	chr2_222559541_+	SINE	Alu	AluJb
CAediting_244902	chr2_222559542_+	SINE	Alu	AluJb
CAediting_244903	chr2_222559543_+	SINE	Alu	AluJb
CAediting_244904	chr2_222559561_+	SINE	Alu	AluJb
CAediting_244905	chr2_222559562_+	SINE	Alu	AluJb
CAediting_244906	chr2_222559565_+	SINE	Alu	AluJb
CAediting_244907	chr2_222559579_+	SINE	Alu	AluJb
CAediting_244908	chr2_222559588_+	SINE	Alu	AluJb
CAediting_244909	chr2_222559591_+	SINE	Alu	AluJb
CAediting_244910	chr2_222559604_+	SINE	Alu	AluJb
CAediting_244911	chr2_222559609_+	SINE	Alu	AluJb
CAediting_244912	chr2_222559614_+	SINE	Alu	AluJb
CAediting_244913	chr2_222559617_+	SINE	Alu	AluJb
CAediting_244914	chr2_222559625_+	SINE	Alu	AluJb
CAediting_244915	chr2_222559629_+	SINE	Alu	AluJb
CAediting_244916	chr2_222559630_+	SINE	Alu	AluJb
CAediting_244917	chr2_222559638_+	SINE	Alu	AluJb
CAediting_244918	chr2_222559640_+	SINE	Alu	AluJb
CAediting_244919	chr2_222559644_+	SINE	Alu	AluJb
CAediting_244920	chr2_222559664_+	SINE	Alu	AluJb
CAediting_244921	chr2_222559668_+	SINE	Alu	AluJb
CAediting_244922	chr2_222559675_+	SINE	Alu	AluJb
CAediting_244923	chr2_222559677_+	SINE	Alu	AluJb
CAediting_244924	chr2_222559694_+	SINE	Alu	AluJb
CAediting_244925	chr2_222559698_+	SINE	Alu	AluJb
CAediting_244926	chr2_222559702_+	SINE	Alu	AluJb
CAediting_244927	chr2_222559707_+	SINE	Alu	AluJb
CAediting_244928	chr2_222559715_+	SINE	Alu	AluJb
CAediting_244929	chr2_222559716_+	SINE	Alu	AluJb
CAediting_244930	chr2_222559717_+	SINE	Alu	AluJb
CAediting_244931	chr2_222559726_+	SINE	Alu	AluJb
CAediting_244932	chr2_222559729_+	SINE	Alu	AluJb
CAediting_244933	chr2_222559731_+	SINE	Alu	AluJb
CAediting_244934	chr2_222559735_+	SINE	Alu	AluJb
CAediting_244935	chr2_222559738_+	SINE	Alu	AluJb
CAediting_244936	chr2_222560844_+	SINE	Alu	AluY
CAediting_244937	chr2_222560852_+	SINE	Alu	AluY
CAediting_244938	chr2_222560853_+	SINE	Alu	AluY
CAediting_244939	chr2_222560858_+	SINE	Alu	AluY
CAediting_244940	chr2_222560861_+	SINE	Alu	AluY
CAediting_244941	chr2_222560869_+	SINE	Alu	AluY
CAediting_244942	chr2_222560885_+	SINE	Alu	AluY
CAediting_244943	chr2_222560896_+	SINE	Alu	AluY
CAediting_244944	chr2_222560899_+	SINE	Alu	AluY
CAediting_244945	chr2_222560920_+	SINE	Alu	AluY

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RNA A-to-I editing events in the alternative splicing sites for SGPP2

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000163082.9.SGPP2.

Correlation between RNA A-to-I editing and PSI for ENSG00000163082.9.SGPP2.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for SGPP2

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

COAD.CAediting_244897.ENSG00000163082.SGPP2.png
Soverview

COAD.CAediting_244900.ENSG00000163082.SGPP2.png
Soverview

COAD.CAediting_244927.ENSG00000163082.SGPP2.png
Soverview

COAD.CAediting_244930.ENSG00000163082.SGPP2.png
Soverview

LUAD.CAediting_244916.ENSG00000163082.SGPP2.png
Soverview

PAAD.CAediting_244910.ENSG00000163082.SGPP2.png
Soverview

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Protein coding region RNA A-to-I editings for SGPP2

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for SGPP2

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for SGPP2

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000321276.7	protein_coding

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_244893	ENST00000321276.7	chr2_222559481_+	-1227.70	-1226.50	-1267.70
CAediting_244894	ENST00000321276.7	chr2_222559488_+	-1229.70	-1226.50	-1267.70
CAediting_244895	ENST00000321276.7	chr2_222559505_+	-1228.10	-1226.50	-1267.70
CAediting_244896	ENST00000321276.7	chr2_222559517_+	-1230.60	-1226.50	-1267.70
CAediting_244897	ENST00000321276.7	chr2_222559523_+	-1226.50	-1226.50	-1267.70
CAediting_244898	ENST00000321276.7	chr2_222559525_+	-1227.70	-1226.50	-1267.70
CAediting_244899	ENST00000321276.7	chr2_222559526_+	-1232.50	-1226.50	-1267.70
CAediting_244900	ENST00000321276.7	chr2_222559531_+	-1230.10	-1226.50	-1267.70
CAediting_244901	ENST00000321276.7	chr2_222559541_+	-1226.50	-1226.50	-1267.70
CAediting_244902	ENST00000321276.7	chr2_222559542_+	-1229.90	-1226.50	-1267.70
CAediting_244903	ENST00000321276.7	chr2_222559543_+	-1229.90	-1226.50	-1267.70
CAediting_244904	ENST00000321276.7	chr2_222559561_+	-1226.50	-1226.50	-1267.70
CAediting_244905	ENST00000321276.7	chr2_222559562_+	-1232.90	-1226.50	-1267.70
CAediting_244906	ENST00000321276.7	chr2_222559565_+	-1227.00	-1226.50	-1267.70
CAediting_244907	ENST00000321276.7	chr2_222559579_+	-1227.30	-1226.50	-1267.70
CAediting_244908	ENST00000321276.7	chr2_222559588_+	-1229.70	-1226.50	-1267.70
CAediting_244909	ENST00000321276.7	chr2_222559591_+	-1228.00	-1226.50	-1267.70
CAediting_244910	ENST00000321276.7	chr2_222559604_+	-1229.90	-1226.50	-1267.70
CAediting_244911	ENST00000321276.7	chr2_222559609_+	-1232.50	-1226.50	-1267.70
CAediting_244912	ENST00000321276.7	chr2_222559614_+	-1230.90	-1226.50	-1267.70
CAediting_244913	ENST00000321276.7	chr2_222559617_+	-1226.70	-1226.50	-1267.70
CAediting_244914	ENST00000321276.7	chr2_222559625_+	-1227.10	-1226.50	-1267.70
CAediting_244915	ENST00000321276.7	chr2_222559629_+	-1226.50	-1226.50	-1267.70
CAediting_244916	ENST00000321276.7	chr2_222559630_+	-1227.80	-1226.50	-1267.70
CAediting_244917	ENST00000321276.7	chr2_222559638_+	-1227.80	-1226.50	-1267.70
CAediting_244918	ENST00000321276.7	chr2_222559640_+	-1225.60	-1226.50	-1267.70
CAediting_244919	ENST00000321276.7	chr2_222559644_+	-1232.70	-1226.50	-1267.70
CAediting_244920	ENST00000321276.7	chr2_222559664_+	-1225.80	-1226.50	-1267.70
CAediting_244921	ENST00000321276.7	chr2_222559668_+	-1227.90	-1226.50	-1267.70
CAediting_244922	ENST00000321276.7	chr2_222559675_+	-1231.10	-1226.50	-1267.70
CAediting_244923	ENST00000321276.7	chr2_222559677_+	-1227.30	-1226.50	-1267.70
CAediting_244924	ENST00000321276.7	chr2_222559694_+	-1233.20	-1226.50	-1267.70
CAediting_244925	ENST00000321276.7	chr2_222559698_+	-1231.90	-1226.50	-1267.70
CAediting_244926	ENST00000321276.7	chr2_222559702_+	-1226.10	-1226.50	-1267.70
CAediting_244927	ENST00000321276.7	chr2_222559707_+	-1232.70	-1226.50	-1267.70
CAediting_244928	ENST00000321276.7	chr2_222559715_+	-1226.20	-1226.50	-1267.70
CAediting_244929	ENST00000321276.7	chr2_222559716_+	-1226.60	-1226.50	-1267.70
CAediting_244930	ENST00000321276.7	chr2_222559717_+	-1226.20	-1226.50	-1267.70
CAediting_244931	ENST00000321276.7	chr2_222559726_+	-1225.90	-1226.50	-1267.70
CAediting_244932	ENST00000321276.7	chr2_222559729_+	-1223.50	-1226.50	-1267.70
CAediting_244933	ENST00000321276.7	chr2_222559731_+	-1225.20	-1226.50	-1267.70
CAediting_244934	ENST00000321276.7	chr2_222559735_+	-1226.10	-1226.50	-1267.70
CAediting_244935	ENST00000321276.7	chr2_222559738_+	-1225.60	-1226.50	-1267.70
CAediting_244936	ENST00000321276.7	chr2_222560844_+	-1226.10	-1226.50	-1267.70
CAediting_244937	ENST00000321276.7	chr2_222560852_+	-1226.60	-1226.50	-1267.70
CAediting_244938	ENST00000321276.7	chr2_222560853_+	-1226.50	-1226.50	-1267.70
CAediting_244939	ENST00000321276.7	chr2_222560858_+	-1225.80	-1226.50	-1267.70
CAediting_244940	ENST00000321276.7	chr2_222560861_+	-1226.10	-1226.50	-1267.70
CAediting_244941	ENST00000321276.7	chr2_222560869_+	-1225.60	-1226.50	-1267.70
CAediting_244942	ENST00000321276.7	chr2_222560885_+	-1225.60	-1226.50	-1267.70
CAediting_244943	ENST00000321276.7	chr2_222560896_+	-1225.80	-1226.50	-1267.70
CAediting_244944	ENST00000321276.7	chr2_222560899_+	-1225.60	-1226.50	-1267.70
CAediting_244945	ENST00000321276.7	chr2_222560920_+	-1226.50	-1226.50	-1267.70

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Relation with ADAR for SGPP2

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
STAD	CAediting_244817	chr2_222426119_+	0.0452170540141205	0.227443999403172	.	.	.	.
STAD	CAediting_244896	chr2_222559517_+	.	.	2.51056224334155e-06	0.553715647854627	.	.
BLCA	CAediting_244897	chr2_222559523_+	5.26752084165178e-06	0.326050235274982	.	.	.	.
BRCA	CAediting_244897	chr2_222559523_+	5.1680061250075e-16	0.421803403020669	.	.	.	.
CESC	CAediting_244897	chr2_222559523_+	0.00030889906054826	0.236821000179717	.	.	.	.
LUAD	CAediting_244897	chr2_222559523_+	4.67475179328753e-18	0.382022370108664	.	.	.	.
COAD	CAediting_244897	chr2_222559523_+	1.8639067816954e-08	0.290218059540427	0.0457895712402138	0.105049920875007	.	.
LUSC	CAediting_244897	chr2_222559523_+	3.1408562332489e-16	0.371383111159107	.	.	.	.
PRAD	CAediting_244897	chr2_222559523_+	0.0335350335353641	0.208655889726424	.	.	.	.
HNSC	CAediting_244897	chr2_222559523_+	1.84652885279857e-16	0.392281230401942	0.000146060185836372	0.186926619918091	.	.
STAD	CAediting_244897	chr2_222559523_+	1.43979548527154e-12	0.373055680013141	.	.	.	.
KICH	CAediting_244897	chr2_222559523_+	0.0335741499352173	0.277155746745153	.	.	.	.
THCA	CAediting_244897	chr2_222559523_+	9.14517380915745e-05	0.19580576543972	.	.	.	.
KIRC	CAediting_244897	chr2_222559523_+	6.98411700410634e-12	0.30718737913038	.	.	.	.
UCEC	CAediting_244897	chr2_222559523_+	2.20299506520817e-10	0.335400864641868	.	.	.	.
KIRP	CAediting_244897	chr2_222559523_+	5.67849673049641e-05	0.252751720863113	.	.	.	.
ESCA	CAediting_244897	chr2_222559523_+	0.000509483070422079	0.276842436393991	.	.	.	.
OV	CAediting_244897	chr2_222559523_+	6.23355195405150e-09	0.313878393130522	.	.	.	.
PAAD	CAediting_244897	chr2_222559523_+	8.59988278327606e-07	0.375325153698452	.	.	.	.
PCPG	CAediting_244897	chr2_222559523_+	1.02951453423802e-09	0.482671220797767	0.00450336959729048	0.236241492468424	.	.
MESO	CAediting_244897	chr2_222559523_+	0.000337600573433145	0.431050216871836	.	.	.	.
READ	CAediting_244897	chr2_222559523_+	0.000442135559918756	0.323735119477102	.	.	.	.
LUAD	CAediting_244899	chr2_222559526_+	0.00105463447627455	0.285157928503637	.	.	.	.
LUSC	CAediting_244899	chr2_222559526_+	0.0469139708926453	0.235001317823368	.	.	.	.
HNSC	CAediting_244899	chr2_222559526_+	.	.	0.00767775160326028	0.294200005473355	.	.
ESCA	CAediting_244899	chr2_222559526_+	0.0156111893575075	0.305896411769826	.	.	.	.
OV	CAediting_244899	chr2_222559526_+	0.01790787675016	0.19309935753598	.	.	.	.
BLCA	CAediting_244900	chr2_222559531_+	0.00244408430620572	0.244862115639085	.	.	.	.
BRCA	CAediting_244900	chr2_222559531_+	4.09234934032148e-09	0.337185831056718	.	.	.	.
CESC	CAediting_244900	chr2_222559531_+	7.06556347402559e-05	0.284945455088408	.	.	.	.
LUAD	CAediting_244900	chr2_222559531_+	2.13298907403513e-15	0.372021070241412	.	.	.	.
COAD	CAediting_244900	chr2_222559531_+	0.000449553425781634	0.197498499997201	.	.	.	.
LUSC	CAediting_244900	chr2_222559531_+	4.66778944319317e-14	0.363396438418783	.	.	.	.
HNSC	CAediting_244900	chr2_222559531_+	9.24672077015606e-10	0.314225357244752	0.00341487154687466	0.153283608595715	.	.
STAD	CAediting_244900	chr2_222559531_+	9.72841801614249e-07	0.265720621461398	.	.	.	.
KICH	CAediting_244900	chr2_222559531_+	0.0186045714100787	0.325328138589021	.	.	.	.
KIRC	CAediting_244900	chr2_222559531_+	2.46127804781798e-05	0.194896960946365	.	.	.	.
UCEC	CAediting_244900	chr2_222559531_+	0.000255168731606572	0.201852505195435	.	.	.	.
KIRP	CAediting_244900	chr2_222559531_+	0.000546118513326225	0.247221523819748	0.0320063786588908	0.154830365626919	.	.
ESCA	CAediting_244900	chr2_222559531_+	5.07583947393009e-05	0.323530953653532	.	.	.	.
OV	CAediting_244900	chr2_222559531_+	1.15048716801536e-09	0.334876087753358	.	.	.	.
PAAD	CAediting_244900	chr2_222559531_+	0.00157914425942096	0.261006115818046	.	.	.	.
PCPG	CAediting_244900	chr2_222559531_+	0.000254707955388559	0.322879101760906	0.000903959846304456	0.294387944599465	.	.
MESO	CAediting_244900	chr2_222559531_+	0.00205323273459222	0.403350260085639	0.037684433641557	0.27848161183243	.	.
READ	CAediting_244900	chr2_222559531_+	0.0257117665513606	0.217666775657358	.	.	.	.
STAD	CAediting_244903	chr2_222559543_+	0.0112929764488471	0.251164146270808	0.0157464287893217	0.239744546391736	.	.
BRCA	CAediting_244905	chr2_222559562_+	0.00317715136285978	0.253055464879592	.	.	.	.
CESC	CAediting_244905	chr2_222559562_+	.	.	0.00815512197552438	0.318332990767575	.	.
LUAD	CAediting_244905	chr2_222559562_+	1.2470688157782e-05	0.285510643308377	.	.	.	.
STAD	CAediting_244905	chr2_222559562_+	0.00289179456864197	0.229849159416545	8.93113201332965e-06	0.337132347704062	0.00396734980835944	0.222461506667471
KIRC	CAediting_244905	chr2_222559562_+	0.0261685219496025	0.127963819540947	.	.	.	.
BRCA	CAediting_244907	chr2_222559579_+	3.56240311405045e-08	0.362576008166064	.	.	.	.
CESC	CAediting_244907	chr2_222559579_+	0.0167924667112354	0.261844567721991	.	.	.	.
LUAD	CAediting_244907	chr2_222559579_+	0.0011036261708803	0.196797437830221	.	.	0.000108479191436388	0.232547022364655
STAD	CAediting_244907	chr2_222559579_+	0.0150981521971225	0.193032636587616	0.0403234320828059	0.163322556993115	.	.
UCEC	CAediting_244907	chr2_222559579_+	0.00169294133193536	0.242584955969493	.	.	.	.
BRCA	CAediting_244910	chr2_222559604_+	3.360227593117e-14	0.465476176284369	.	.	.	.
LUAD	CAediting_244910	chr2_222559604_+	1.17423153616852e-18	0.448875166566888	.	.	.	.
LUSC	CAediting_244910	chr2_222559604_+	1.19878447361084e-09	0.3872843174098	.	.	.	.
STAD	CAediting_244910	chr2_222559604_+	0.00152831331089256	0.253271984483018	0.000389531723011511	0.282295476531005	.	.
KIRC	CAediting_244910	chr2_222559604_+	0.000166715673007533	0.199914456476567	.	.	.	.
UCEC	CAediting_244910	chr2_222559604_+	0.000101419973664567	0.278251476389244	.	.	.	.
ESCA	CAediting_244910	chr2_222559604_+	0.00475604853560158	0.3126016093882	.	.	.	.
OV	CAediting_244910	chr2_222559604_+	0.000479387696800689	0.229432879880597	.	.	.	.
PAAD	CAediting_244910	chr2_222559604_+	4.44032581926756e-06	0.434826181371977	.	.	.	.
BRCA	CAediting_244914	chr2_222559625_+	2.05499455881863e-11	0.432847091323194	.	.	.	.
CESC	CAediting_244914	chr2_222559625_+	2.83963627082111e-05	0.3636870633821	.	.	.	.
LUAD	CAediting_244914	chr2_222559625_+	1.29899462589918e-11	0.336810883742007	.	.	.	.
COAD	CAediting_244914	chr2_222559625_+	0.0300183906021128	0.186840396259379	.	.	.	.
LUSC	CAediting_244914	chr2_222559625_+	5.06178606793102e-09	0.360436210604471	.	.	.	.
HNSC	CAediting_244914	chr2_222559625_+	2.7476124027325e-07	0.336745866754652	.	.	.	.
STAD	CAediting_244914	chr2_222559625_+	0.00201390709560891	0.22564099001037	.	.	.	.
THCA	CAediting_244914	chr2_222559625_+	0.038045342376434	0.127269254177036	.	.	.	.
KIRC	CAediting_244914	chr2_222559625_+	0.000488720000734166	0.176425666378479	.	.	.	.
UCEC	CAediting_244914	chr2_222559625_+	0.00261453510878111	0.224915234394469	.	.	.	.
OV	CAediting_244914	chr2_222559625_+	0.00037063484187098	0.229378709157059	.	.	.	.
PAAD	CAediting_244914	chr2_222559625_+	0.0208484829233045	0.214365800836274	.	.	.	.
PCPG	CAediting_244914	chr2_222559625_+	0.0033719610407248	0.310968532791205	.	.	.	.
BRCA	CAediting_244915	chr2_222559629_+	0.000189450619006389	0.412979941365843	.	.	.	.
LUAD	CAediting_244915	chr2_222559629_+	0.0226348328988763	0.236216584481447	.	.	.	.
BRCA	CAediting_244919	chr2_222559644_+	0.000353423344237634	0.300882347178885	.	.	.	.
CESC	CAediting_244919	chr2_222559644_+	0.00273539993551394	0.343464823165609	.	.	.	.
LUAD	CAediting_244919	chr2_222559644_+	0.00282491102157719	0.180406339972072	.	.	.	.
LUSC	CAediting_244919	chr2_222559644_+	1.35397584566815e-06	0.338769876343737	.	.	.	.
UCEC	CAediting_244919	chr2_222559644_+	.	.	0.0233852698282608	0.204340321059738	.	.
OV	CAediting_244919	chr2_222559644_+	1.30914215612641e-05	0.295100100058992	.	.	.	.
PAAD	CAediting_244919	chr2_222559644_+	0.00116244338303154	0.346440606449563	.	.	.	.
PCPG	CAediting_244919	chr2_222559644_+	0.0060054915417535	0.287487822438287	.	.	.	.
BRCA	CAediting_244924	chr2_222559694_+	0.00597433599046655	0.376269165302985	.	.	.	.
LUAD	CAediting_244924	chr2_222559694_+	5.66037447450358e-05	0.398981839305144	.	.	.	.
HNSC	CAediting_244924	chr2_222559694_+	.	.	0.0425256942216994	0.285166439665983	.	.
STAD	CAediting_244924	chr2_222559694_+	.	.	.	.	0.0116487400055185	0.337842474452228
BRCA	CAediting_244925	chr2_222559698_+	0.000757901427969194	0.343189040795093	.	.	.	.
CESC	CAediting_244925	chr2_222559698_+	0.00103198956947407	0.364583156608848	.	.	.	.
LUAD	CAediting_244925	chr2_222559698_+	8.95858096346941e-14	0.447680546367476	.	.	.	.
LUSC	CAediting_244925	chr2_222559698_+	2.48387304625491e-06	0.360295528687032	.	.	.	.
STAD	CAediting_244925	chr2_222559698_+	0.0146257889741518	0.172426895643541	.	.	.	.
KIRC	CAediting_244925	chr2_222559698_+	0.0306450670094121	0.12163256656389	.	.	.	.
ESCA	CAediting_244925	chr2_222559698_+	0.00296729099022783	0.32417119756217	.	.	.	.
OV	CAediting_244925	chr2_222559698_+	0.0449774560893261	0.138508009586323	.	.	.	.
BLCA	CAediting_244927	chr2_222559707_+	0.00434607759960378	0.308172504860827	.	.	.	.
BRCA	CAediting_244927	chr2_222559707_+	2.83179499898076e-09	0.448057720571697	.	.	.	.
CESC	CAediting_244927	chr2_222559707_+	0.000149155044294623	0.310880981830295	.	.	.	.
LUAD	CAediting_244927	chr2_222559707_+	1.67265919573437e-22	0.466833884347529	.	.	.	.
COAD	CAediting_244927	chr2_222559707_+	0.000489607617265817	0.240216808728869	.	.	.	.
LUSC	CAediting_244927	chr2_222559707_+	7.65150039702629e-11	0.361420308256115	0.0229618857953948	0.130192666248441	.	.
HNSC	CAediting_244927	chr2_222559707_+	0.00286568247820845	0.174804573893578	0.00200284732999418	0.181034005050148	.	.
STAD	CAediting_244927	chr2_222559707_+	6.70403415657744e-05	0.231509611130319	.	.	.	.
THCA	CAediting_244927	chr2_222559707_+	0.0213461926649743	0.157657145443936	.	.	.	.
KIRC	CAediting_244927	chr2_222559707_+	4.66780032369868e-06	0.223155876090772	.	.	.	.
UCEC	CAediting_244927	chr2_222559707_+	7.50193630788002e-05	0.285434249272547	0.0205907327451215	0.169230840427231	.	.
ESCA	CAediting_244927	chr2_222559707_+	1.05805710679186e-05	0.360344386129448	.	.	.	.
OV	CAediting_244927	chr2_222559707_+	9.27577348708352e-10	0.351286907186912	.	.	.	.
PAAD	CAediting_244927	chr2_222559707_+	1.94587803005846e-07	0.447006684526861	.	.	.	.
BRCA	CAediting_244929	chr2_222559716_+	9.79879524691224e-05	0.426686323302582	.	.	.	.
LUAD	CAediting_244929	chr2_222559716_+	2.34229885591013e-07	0.343782167675572	.	.	.	.
STAD	CAediting_244929	chr2_222559716_+	0.000326567037810092	0.26273959905121	0.00939684189632952	0.191527230949047	.	.
KIRC	CAediting_244929	chr2_222559716_+	0.0116432986207799	0.14381975633043	.	.	.	.
UCEC	CAediting_244929	chr2_222559716_+	0.0263319030165936	0.291644547058555	.	.	.	.
KIRP	CAediting_244929	chr2_222559716_+	0.00857763669873925	0.360898200650664	.	.	.	.
ESCA	CAediting_244929	chr2_222559716_+	0.00293829056959416	0.29741787557939	.	.	.	.
BLCA	CAediting_244930	chr2_222559717_+	0.00926171840076652	0.289244185839473	.	.	.	.
BRCA	CAediting_244930	chr2_222559717_+	2.26276370619544e-09	0.487775265860916	.	.	.	.
CESC	CAediting_244930	chr2_222559717_+	2.22658264790685e-06	0.39428352008325	.	.	.	.
LUAD	CAediting_244930	chr2_222559717_+	6.51295634855444e-20	0.44535456179849	.	.	.	.
COAD	CAediting_244930	chr2_222559717_+	5.11629348649375e-06	0.311655403902639	0.021801307903782	0.159761687792845	.	.
LUSC	CAediting_244930	chr2_222559717_+	7.22983489440091e-08	0.306737899120121	.	.	.	.
HNSC	CAediting_244930	chr2_222559717_+	0.000167805473297466	0.221114553500973	0.000164210783313298	0.221424501586539	.	.
STAD	CAediting_244930	chr2_222559717_+	0.000309627491864412	0.212899299520758	.	.	.	.
THCA	CAediting_244930	chr2_222559717_+	0.00808932055386466	0.190615032748739	.	.	.	.
KIRC	CAediting_244930	chr2_222559717_+	5.78931647015028e-06	0.221532704932464	.	.	.	.
UCEC	CAediting_244930	chr2_222559717_+	4.98333366031572e-05	0.299155835304736	.	.	.	.
KIRP	CAediting_244930	chr2_222559717_+	0.00268175335884283	0.224982201541773	.	.	.	.
ESCA	CAediting_244930	chr2_222559717_+	7.6446722278198e-05	0.326809761242954	.	.	.	.
OV	CAediting_244930	chr2_222559717_+	4.71128328071562e-08	0.321458098979727	.	.	.	.
PAAD	CAediting_244930	chr2_222559717_+	0.00013607778781173	0.337310141487231	.	.	.	.
PCPG	CAediting_244930	chr2_222559717_+	0.00066764969587526	0.405318632075949	.	.	.	.
LUAD	CAediting_244938	chr2_222560853_+	6.30133692064075e-06	0.373799385119517	.	.	.	.
KIRC	CAediting_244938	chr2_222560853_+	0.00309656012920517	0.207146525093479	.	.	.	.

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Relation with cancer stages for SGPP2

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
BRCA	pathologic_stage	CAediting_244915	chr2_222559629_+	0.014951839817555	0.276422548375401
BRCA	pathologic_stage	CAediting_244919	chr2_222559644_+	0.0262223577596379	0.191325156525037
BRCA	pathologic_stage	CAediting_244929	chr2_222559716_+	0.0353487928468227	0.238667914161251
BRCA	pathologic_stage	CAediting_244930	chr2_222559717_+	0.0108754604168825	0.220186086043439
CESC	clinical_stage	CAediting_244919	chr2_222559644_+	0.0129922396403206	0.291455208577448
HNSC	clinical_stage	CAediting_244924	chr2_222559694_+	0.00456506668287514	-0.394661945661455
KIRC	pathologic_stage	CAediting_244897	chr2_222559523_+	0.0394587583462591	0.0945277887150232
KIRC	pathologic_stage	CAediting_244899	chr2_222559526_+	0.0228521116105128	0.208533147988484
KIRC	pathologic_stage	CAediting_244900	chr2_222559531_+	0.00224299106558085	0.142150034493488
KIRC	pathologic_stage	CAediting_244914	chr2_222559625_+	0.0294230701859777	0.111007221994897
KIRP	clinical_stage	CAediting_244897	chr2_222559523_+	0.0398912606724169	0.158244242190107
KIRP	clinical_stage	CAediting_244930	chr2_222559717_+	0.0271142946307874	0.203467807938298
KIRP	pathologic_stage	CAediting_244897	chr2_222559523_+	0.00422152964520337	0.190057987849615
KIRP	pathologic_stage	CAediting_244900	chr2_222559531_+	0.0380126138152593	0.158350960572671
KIRP	pathologic_stage	CAediting_244927	chr2_222559707_+	0.0159648067554917	0.193288980444512
KIRP	pathologic_stage	CAediting_244930	chr2_222559717_+	0.00923830660800113	0.20457322236388
READ	pathologic_stage	CAediting_244897	chr2_222559523_+	0.0463754523330629	-0.19579922890665
READ	pathologic_stage	CAediting_244900	chr2_222559531_+	0.00288563481757979	-0.299446555007435
STAD	pathologic_stage	CAediting_244814	chr2_222426097_+	0.00160466989191315	0.358162850216291
THCA	pathologic_stage	CAediting_244897	chr2_222559523_+	0.0273053759910871	0.112058182186852
THCA	pathologic_stage	CAediting_244914	chr2_222559625_+	0.0285827778463646	0.135273376905867

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Relation with survival for SGPP2

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
LUAD	CAediting_244899	chr2_222559526_+	0.0428690262702119	0.0153208	192.537
THCA	CAediting_244897	chr2_222559523_+	0.00175756277369643	0.00735929	4515710
ESCA	CAediting_244899	chr2_222559526_+	0.0373506298009926	0.00256496	324571
ESCA	CAediting_244938	chr2_222560853_+	0.0171416019317738	0.0142246	14286.3
OV	CAediting_244919	chr2_222559644_+	0.023141156400412	0.0100792	16.3874

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RelatedDrugs for SGPP2

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for SGPP2

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene