Home

Download

Statistics

Examples

Help

Contact

Editing gene: TATDN3 (CAeditome ID:128387)

Gene summary for TATDN3

Gene summary

Gene information	Gene symbol	TATDN3
	Gene ID	128387
	Gene name	TatD DNase domain containing 3
	Synonyms	-
	Cytomap	1q32.3
	Type of gene	protein-coding
	Description	putative deoxyribonuclease TATDN3
	Modification date	20210518
	UniProtAcc	Q17R31
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

Top

RNA A-to-I events for TATDN3

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000203705.9

RNA A-to-I editing events in Cancer.

CAediting_138090(212792591, +), CAediting_138091(212794120, +), CAediting_138092(212794470, +), CAediting_138093(212798118, +), CAediting_138094(212798163, +), CAediting_138095(212798164, +), CAediting_138096(212798166, +), CAediting_138097(212798167, +), CAediting_138098(212798183, +), CAediting_138099(212798205, +), CAediting_138100(212798227, +), CAediting_138101(212798228, +), CAediting_138102(212798251, +), CAediting_138103(212798270, +), CAediting_138104(212798419, +), CAediting_138105(212798433, +), CAediting_138106(212799655, +), CAediting_138107(212801508, +), CAediting_138108(212803764, +), CAediting_138109(212803774, +), CAediting_138110(212803781, +), CAediting_138111(212803797, +), CAediting_138112(212803802, +), CAediting_138113(212803816, +), CAediting_138114(212803857, +), CAediting_138115(212803858, +), CAediting_138116(212803859, +), CAediting_138117(212803860, +), CAediting_138118(212803871, +), CAediting_138119(212803874, +), CAediting_138120(212803875, +), CAediting_138121(212803876, +), CAediting_138122(212803877, +), CAediting_138123(212803880, +), CAediting_138124(212803882, +), CAediting_138125(212803889, +), CAediting_138126(212809429, +), CAediting_138127(212809430, +), CAediting_138128(212809497, +), CAediting_138129(212809518, +), CAediting_138130(212809527, +), CAediting_138131(212809537, +), CAediting_138132(212809563, +), CAediting_138133(212809573, +), CAediting_138134(212809586, +), CAediting_138135(212809590, +), CAediting_138136(212809604, +), CAediting_138137(212809617, +), CAediting_138138(212809630, +), CAediting_138139(212809650, +), CAediting_138140(212809746, +), CAediting_138141(212809750, +), CAediting_138142(212809760, +), CAediting_138143(212809762, +), CAediting_138144(212809792, +), CAediting_138145(212809822, +), CAediting_138146(212809824, +), CAediting_138147(212809862, +), CAediting_138148(212809904, +), CAediting_138149(212809949, +), CAediting_138150(212810102, +), CAediting_138151(212810155, +), CAediting_138152(212810158, +), CAediting_138153(212810173, +), CAediting_138154(212810246, +), CAediting_138155(212810391, +), CAediting_138156(212810566, +), CAediting_138157(212810572, +), CAediting_138158(212810607, +), CAediting_138159(212810612, +), CAediting_138160(212811002, +), CAediting_138161(212811003, +), CAediting_138162(212811014, +), CAediting_138163(212811076, +), CAediting_138164(212811086, +), CAediting_138165(212811124, +), CAediting_138166(212811138, +), CAediting_138167(212811278, +), CAediting_138168(212811333, +), CAediting_138169(212811447, +), CAediting_138170(212811473, +), CAediting_138171(212811499, +), CAediting_138172(212811511, +), CAediting_138173(212811526, +), CAediting_138174(212811632, +), CAediting_138175(212813604, +), CAediting_138176(212813780, +), CAediting_138177(212814055, +), CAediting_138178(212814112, +), CAediting_138179(212815617, +), CAediting_138180(212815624, +), CAediting_138181(212815641, +), CAediting_138182(212815649, +), CAediting_138183(212815653, +), CAediting_138184(212815663, +), CAediting_138185(212815665, +), CAediting_138186(212815685, +), CAediting_138187(212815732, +), CAediting_138188(212815744, +), CAediting_138189(212815785, +), CAediting_138190(212815803, +), CAediting_138191(212816223, +), CAediting_138192(212816237, +), CAediting_138193(212816262, +), CAediting_138194(212816269, +), CAediting_138195(212816294, +),

Top

RNA editing positional annotations for TATDN3 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_138090	chr1_212792591_+	ncRNA_intronic
CAediting_138091	chr1_212794120_+	ncRNA_intronic
CAediting_138092	chr1_212794470_+	ncRNA_intronic
CAediting_138093	chr1_212798118_+	ncRNA_intronic
CAediting_138094	chr1_212798163_+	ncRNA_intronic
CAediting_138095	chr1_212798164_+	ncRNA_intronic
CAediting_138096	chr1_212798166_+	ncRNA_intronic
CAediting_138097	chr1_212798167_+	ncRNA_intronic
CAediting_138098	chr1_212798183_+	ncRNA_intronic
CAediting_138099	chr1_212798205_+	ncRNA_intronic
CAediting_138100	chr1_212798227_+	ncRNA_intronic
CAediting_138101	chr1_212798228_+	ncRNA_intronic
CAediting_138102	chr1_212798251_+	ncRNA_intronic
CAediting_138103	chr1_212798270_+	ncRNA_intronic
CAediting_138104	chr1_212798419_+	ncRNA_intronic
CAediting_138105	chr1_212798433_+	ncRNA_intronic
CAediting_138106	chr1_212799655_+	ncRNA_intronic
CAediting_138107	chr1_212801508_+	ncRNA_intronic
CAediting_138108	chr1_212803764_+	ncRNA_intronic
CAediting_138109	chr1_212803774_+	ncRNA_intronic
CAediting_138110	chr1_212803781_+	ncRNA_intronic
CAediting_138111	chr1_212803797_+	ncRNA_intronic
CAediting_138112	chr1_212803802_+	ncRNA_intronic
CAediting_138113	chr1_212803816_+	ncRNA_intronic
CAediting_138114	chr1_212803857_+	ncRNA_intronic
CAediting_138115	chr1_212803858_+	ncRNA_intronic
CAediting_138116	chr1_212803859_+	ncRNA_intronic
CAediting_138117	chr1_212803860_+	ncRNA_intronic
CAediting_138118	chr1_212803871_+	ncRNA_intronic
CAediting_138119	chr1_212803874_+	ncRNA_intronic
CAediting_138120	chr1_212803875_+	ncRNA_intronic
CAediting_138121	chr1_212803876_+	ncRNA_intronic
CAediting_138122	chr1_212803877_+	ncRNA_intronic
CAediting_138123	chr1_212803880_+	ncRNA_intronic
CAediting_138124	chr1_212803882_+	ncRNA_intronic
CAediting_138125	chr1_212803889_+	ncRNA_intronic
CAediting_138126	chr1_212809429_+	ncRNA_intronic
CAediting_138127	chr1_212809430_+	ncRNA_intronic
CAediting_138128	chr1_212809497_+	ncRNA_intronic
CAediting_138129	chr1_212809518_+	ncRNA_intronic
CAediting_138130	chr1_212809527_+	ncRNA_intronic
CAediting_138131	chr1_212809537_+	ncRNA_intronic
CAediting_138132	chr1_212809563_+	ncRNA_intronic
CAediting_138133	chr1_212809573_+	ncRNA_intronic
CAediting_138134	chr1_212809586_+	ncRNA_intronic
CAediting_138135	chr1_212809590_+	ncRNA_intronic
CAediting_138136	chr1_212809604_+	ncRNA_intronic
CAediting_138137	chr1_212809617_+	ncRNA_intronic
CAediting_138138	chr1_212809630_+	ncRNA_intronic
CAediting_138139	chr1_212809650_+	ncRNA_intronic
CAediting_138140	chr1_212809746_+	ncRNA_intronic
CAediting_138141	chr1_212809750_+	ncRNA_intronic
CAediting_138142	chr1_212809760_+	ncRNA_intronic
CAediting_138143	chr1_212809762_+	ncRNA_intronic
CAediting_138144	chr1_212809792_+	ncRNA_intronic
CAediting_138145	chr1_212809822_+	ncRNA_intronic
CAediting_138146	chr1_212809824_+	ncRNA_intronic
CAediting_138147	chr1_212809862_+	ncRNA_intronic
CAediting_138148	chr1_212809904_+	ncRNA_intronic
CAediting_138149	chr1_212809949_+	ncRNA_intronic
CAediting_138150	chr1_212810102_+	ncRNA_intronic
CAediting_138151	chr1_212810155_+	ncRNA_intronic
CAediting_138152	chr1_212810158_+	ncRNA_intronic
CAediting_138153	chr1_212810173_+	ncRNA_intronic
CAediting_138154	chr1_212810246_+	ncRNA_intronic
CAediting_138155	chr1_212810391_+	ncRNA_intronic
CAediting_138156	chr1_212810566_+	ncRNA_intronic
CAediting_138157	chr1_212810572_+	ncRNA_intronic
CAediting_138158	chr1_212810607_+	ncRNA_intronic
CAediting_138159	chr1_212810612_+	ncRNA_intronic
CAediting_138160	chr1_212811002_+	ncRNA_intronic
CAediting_138161	chr1_212811003_+	ncRNA_intronic
CAediting_138162	chr1_212811014_+	ncRNA_intronic
CAediting_138163	chr1_212811076_+	ncRNA_intronic
CAediting_138164	chr1_212811086_+	ncRNA_intronic
CAediting_138165	chr1_212811124_+	ncRNA_intronic
CAediting_138166	chr1_212811138_+	ncRNA_intronic
CAediting_138167	chr1_212811278_+	ncRNA_intronic
CAediting_138168	chr1_212811333_+	ncRNA_intronic
CAediting_138169	chr1_212811447_+	ncRNA_intronic
CAediting_138170	chr1_212811473_+	ncRNA_intronic
CAediting_138171	chr1_212811499_+	ncRNA_intronic
CAediting_138172	chr1_212811511_+	ncRNA_intronic
CAediting_138173	chr1_212811526_+	ncRNA_intronic
CAediting_138174	chr1_212811632_+	ncRNA_intronic
CAediting_138175	chr1_212813604_+	ncRNA_intronic
CAediting_138176	chr1_212813780_+	ncRNA_intronic
CAediting_138177	chr1_212814055_+	ncRNA_intronic
CAediting_138178	chr1_212814112_+	ncRNA_intronic
CAediting_138179	chr1_212815617_+	UTR3
CAediting_138180	chr1_212815624_+	UTR3
CAediting_138181	chr1_212815641_+	UTR3
CAediting_138182	chr1_212815649_+	UTR3
CAediting_138183	chr1_212815653_+	UTR3
CAediting_138184	chr1_212815663_+	UTR3
CAediting_138185	chr1_212815665_+	UTR3
CAediting_138186	chr1_212815685_+	UTR3
CAediting_138187	chr1_212815732_+	UTR3
CAediting_138188	chr1_212815744_+	UTR3
CAediting_138189	chr1_212815785_+	UTR3
CAediting_138190	chr1_212815803_+	UTR3
CAediting_138191	chr1_212816223_+	UTR3
CAediting_138192	chr1_212816237_+	UTR3
CAediting_138193	chr1_212816262_+	UTR3
CAediting_138194	chr1_212816269_+	UTR3
CAediting_138195	chr1_212816294_+	UTR3

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_138090	chr1_212792591_+	SINE	Alu	AluJb
CAediting_138091	chr1_212794120_+	SINE	Alu	AluY
CAediting_138092	chr1_212794470_+	SINE	Alu	AluSq2
CAediting_138093	chr1_212798118_+	SINE	Alu	AluSc8
CAediting_138094	chr1_212798163_+	SINE	Alu	AluSc8
CAediting_138095	chr1_212798164_+	SINE	Alu	AluSc8
CAediting_138096	chr1_212798166_+	SINE	Alu	AluSc8
CAediting_138097	chr1_212798167_+	SINE	Alu	AluSc8
CAediting_138098	chr1_212798183_+	SINE	Alu	AluSc8
CAediting_138099	chr1_212798205_+	SINE	Alu	AluSc8
CAediting_138100	chr1_212798227_+	SINE	Alu	AluSc8
CAediting_138101	chr1_212798228_+	SINE	Alu	AluSc8
CAediting_138102	chr1_212798251_+	SINE	Alu	AluSc8
CAediting_138103	chr1_212798270_+	SINE	Alu	AluSc8
CAediting_138104	chr1_212798419_+	SINE	Alu	FLAM_C
CAediting_138105	chr1_212798433_+	SINE	Alu	FLAM_C
CAediting_138106	chr1_212799655_+	SINE	Alu	AluSz6
CAediting_138107	chr1_212801508_+	DNA	TcMar-Tigger	Tigger20a
CAediting_138108	chr1_212803764_+	SINE	Alu	AluSx1
CAediting_138109	chr1_212803774_+	SINE	Alu	AluSx1
CAediting_138110	chr1_212803781_+	SINE	Alu	AluSx1
CAediting_138111	chr1_212803797_+	SINE	Alu	AluSx1
CAediting_138112	chr1_212803802_+	SINE	Alu	AluSx1
CAediting_138113	chr1_212803816_+	SINE	Alu	AluSx1
CAediting_138114	chr1_212803857_+	SINE	Alu	AluSx1
CAediting_138115	chr1_212803858_+	SINE	Alu	AluSx1
CAediting_138116	chr1_212803859_+	SINE	Alu	AluSx1
CAediting_138117	chr1_212803860_+	SINE	Alu	AluSx1
CAediting_138118	chr1_212803871_+	SINE	Alu	AluSx1
CAediting_138119	chr1_212803874_+	SINE	Alu	AluSx1
CAediting_138120	chr1_212803875_+	SINE	Alu	AluSx1
CAediting_138121	chr1_212803876_+	SINE	Alu	AluSx1
CAediting_138122	chr1_212803877_+	SINE	Alu	AluSx1
CAediting_138123	chr1_212803880_+	SINE	Alu	AluSx1
CAediting_138124	chr1_212803882_+	SINE	Alu	AluSx1
CAediting_138125	chr1_212803889_+	SINE	Alu	AluSx1
CAediting_138126	chr1_212809429_+	SINE	Alu	AluY
CAediting_138127	chr1_212809430_+	SINE	Alu	AluY
CAediting_138128	chr1_212809497_+	SINE	Alu	AluY
CAediting_138129	chr1_212809518_+	SINE	Alu	AluY
CAediting_138130	chr1_212809527_+	SINE	Alu	AluY
CAediting_138131	chr1_212809537_+	SINE	Alu	AluY
CAediting_138132	chr1_212809563_+	SINE	Alu	AluY
CAediting_138133	chr1_212809573_+	SINE	Alu	AluY
CAediting_138134	chr1_212809586_+	SINE	Alu	AluY
CAediting_138135	chr1_212809590_+	SINE	Alu	AluY
CAediting_138136	chr1_212809604_+	SINE	Alu	AluY
CAediting_138137	chr1_212809617_+	SINE	Alu	AluY
CAediting_138138	chr1_212809630_+	SINE	Alu	AluY
CAediting_138139	chr1_212809650_+	SINE	Alu	AluY
CAediting_138140	chr1_212809746_+	SINE	Alu	AluSx
CAediting_138141	chr1_212809750_+	SINE	Alu	AluSx
CAediting_138142	chr1_212809760_+	SINE	Alu	AluSx
CAediting_138143	chr1_212809762_+	SINE	Alu	AluSx
CAediting_138144	chr1_212809792_+	SINE	Alu	AluSx
CAediting_138145	chr1_212809822_+	SINE	Alu	AluSx
CAediting_138146	chr1_212809824_+	SINE	Alu	AluSx
CAediting_138147	chr1_212809862_+	SINE	Alu	AluSx
CAediting_138148	chr1_212809904_+	SINE	Alu	AluSx
CAediting_138149	chr1_212809949_+	SINE	Alu	AluSx
CAediting_138150	chr1_212810102_+	SINE	Alu	AluJb
CAediting_138151	chr1_212810155_+	SINE	Alu	AluJb
CAediting_138152	chr1_212810158_+	SINE	Alu	AluJb
CAediting_138153	chr1_212810173_+	SINE	Alu	AluJb
CAediting_138154	chr1_212810246_+	SINE	Alu	AluY
CAediting_138155	chr1_212810391_+	SINE	Alu	AluY
CAediting_138156	chr1_212810566_+	SINE	Alu	AluJb
CAediting_138157	chr1_212810572_+	SINE	Alu	AluJb
CAediting_138158	chr1_212810607_+	SINE	Alu	AluJb
CAediting_138159	chr1_212810612_+	SINE	Alu	AluJb
CAediting_138160	chr1_212811002_+	SINE	Alu	AluSz6
CAediting_138161	chr1_212811003_+	SINE	Alu	AluSz6
CAediting_138162	chr1_212811014_+	SINE	Alu	AluSz6
CAediting_138163	chr1_212811076_+	SINE	Alu	AluSz6
CAediting_138164	chr1_212811086_+	SINE	Alu	AluSz6
CAediting_138165	chr1_212811124_+	SINE	Alu	AluSz6
CAediting_138166	chr1_212811138_+	SINE	Alu	AluSz6
CAediting_138167	chr1_212811278_+	SINE	Alu	AluSx1
CAediting_138168	chr1_212811333_+	SINE	Alu	AluSx1
CAediting_138169	chr1_212811447_+	SINE	Alu	AluSz6
CAediting_138170	chr1_212811473_+	SINE	Alu	AluSz6
CAediting_138171	chr1_212811499_+	SINE	Alu	AluSz6
CAediting_138172	chr1_212811511_+	SINE	Alu	AluSz6
CAediting_138173	chr1_212811526_+	SINE	Alu	AluSz6
CAediting_138174	chr1_212811632_+	SINE	Alu	AluSg
CAediting_138175	chr1_212813604_+	SINE	Alu	AluJb
CAediting_138176	chr1_212813780_+	SINE	Alu	AluSx
CAediting_138177	chr1_212814055_+	SINE	Alu	AluJb
CAediting_138178	chr1_212814112_+	SINE	Alu	AluJb
CAediting_138179	chr1_212815617_+	SINE	Alu	AluSp
CAediting_138180	chr1_212815624_+	SINE	Alu	AluSp
CAediting_138181	chr1_212815641_+	SINE	Alu	AluSp
CAediting_138182	chr1_212815649_+	SINE	Alu	AluSp
CAediting_138183	chr1_212815653_+	SINE	Alu	AluSp
CAediting_138184	chr1_212815663_+	SINE	Alu	AluSp
CAediting_138185	chr1_212815665_+	SINE	Alu	AluSp
CAediting_138186	chr1_212815685_+	SINE	Alu	AluSp
CAediting_138187	chr1_212815732_+	SINE	Alu	AluSp
CAediting_138188	chr1_212815744_+	SINE	Alu	AluSp
CAediting_138189	chr1_212815785_+	SINE	Alu	AluSp
CAediting_138190	chr1_212815803_+	SINE	Alu	AluSp
CAediting_138191	chr1_212816223_+	SINE	Alu	FLAM_A
CAediting_138192	chr1_212816237_+	SINE	Alu	FLAM_A
CAediting_138193	chr1_212816262_+	SINE	Alu	FLAM_A
CAediting_138194	chr1_212816269_+	SINE	Alu	FLAM_A
CAediting_138195	chr1_212816294_+	SINE	Alu	FLAM_A

Top

RNA A-to-I editing events in the alternative splicing sites for TATDN3

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000203705.9.TATDN3.

Correlation between RNA A-to-I editing and PSI for ENSG00000203705.9.TATDN3.

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for TATDN3

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

COAD.CAediting_138191.ENSG00000203705.TATDN3.png
Soverview

PCPG.CAediting_138191.ENSG00000203705.TATDN3.png
Soverview

Top

Protein coding region RNA A-to-I editings for TATDN3

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

Top

The effects of the RNA editing to the miRNA binding sites for TATDN3

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_138191	chr1_212816223_+	ENSG00000203705.9	ENST00000366973	hsa-miR-140-3p	212816218	212816224	7mer-m8	212816205	212816225	159.00	-23.81
CAediting_138191	chr1_212816223_+	ENSG00000203705.9	ENST00000366973	hsa-miR-593-5p	212816221	212816228	8mer-1a	212816205	212816228	153.00	-22.43
CAediting_138191	chr1_212816223_+	ENSG00000203705.9	ENST00000366973	hsa-miR-767-5p	212816221	212816226	6mer	212816205	212816227	141.00	-18.17
CAediting_138191	chr1_212816223_+	ENSG00000203705.9	ENST00000366973	hsa-miR-9851-3p	212816221	212816228	8mer-1a	212816209	212816228	142.00	-21.82
CAediting_138191	chr1_212816223_+	ENSG00000203705.9	ENST00000525574	hsa-miR-140-3p	212816218	212816224	7mer-m8	212816205	212816225	159.00	-23.81
CAediting_138191	chr1_212816223_+	ENSG00000203705.9	ENST00000525574	hsa-miR-593-5p	212816221	212816228	8mer-1a	212816205	212816228	153.00	-22.43
CAediting_138191	chr1_212816223_+	ENSG00000203705.9	ENST00000525574	hsa-miR-767-5p	212816221	212816226	6mer	212816205	212816227	141.00	-18.17
CAediting_138191	chr1_212816223_+	ENSG00000203705.9	ENST00000525574	hsa-miR-9851-3p	212816221	212816228	8mer-1a	212816209	212816228	142.00	-21.82
CAediting_138195	chr1_212816294_+	ENSG00000203705.9	ENST00000366973	hsa-miR-4716-5p	212816288	212816295	8mer-1a	212816274	212816295	149.00	-18.57
CAediting_138195	chr1_212816294_+	ENSG00000203705.9	ENST00000525574	hsa-miR-4716-5p	212816288	212816295	8mer-1a	212816274	212816295	149.00	-18.57
CAediting_138179	chr1_212815617_+	ENSG00000203705.9	ENST00000366973	hsa-miR-1247-3p	212815612	212815618	7mer-m8	212815597	212815619	164.00	-27.61
CAediting_138179	chr1_212815617_+	ENSG00000203705.9	ENST00000525574	hsa-miR-1247-3p	212815612	212815618	7mer-m8	212815597	212815619	164.00	-27.61
CAediting_138179	chr1_212815617_+	ENSG00000203705.9	ENST00000527693	hsa-miR-1247-3p	212815612	212815618	7mer-m8	212815597	212815619	164.00	-27.61
CAediting_138182	chr1_212815649_+	ENSG00000203705.9	ENST00000366973	hsa-miR-6771-5p	212815643	212815649	7mer-m8	212815631	212815650	152.00	-30.62
CAediting_138182	chr1_212815649_+	ENSG00000203705.9	ENST00000525574	hsa-miR-6771-5p	212815643	212815649	7mer-m8	212815631	212815650	152.00	-30.62
CAediting_138182	chr1_212815649_+	ENSG00000203705.9	ENST00000527693	hsa-miR-6771-5p	212815643	212815649	7mer-m8	212815631	212815650	152.00	-30.62
CAediting_138183	chr1_212815653_+	ENSG00000203705.9	ENST00000366973	hsa-miR-3614-5p	212815646	212815652	7mer-m8	212815629	212815653	151.00	-24.19
CAediting_138183	chr1_212815653_+	ENSG00000203705.9	ENST00000366973	hsa-miR-4691-3p	212815650	212815656	7mer-m8	212815630	212815657	154.00	-25.93
CAediting_138183	chr1_212815653_+	ENSG00000203705.9	ENST00000525574	hsa-miR-3614-5p	212815646	212815652	7mer-m8	212815629	212815653	151.00	-24.19
CAediting_138183	chr1_212815653_+	ENSG00000203705.9	ENST00000525574	hsa-miR-4691-3p	212815650	212815656	7mer-m8	212815630	212815657	154.00	-25.93
CAediting_138183	chr1_212815653_+	ENSG00000203705.9	ENST00000527693	hsa-miR-3614-5p	212815646	212815652	7mer-m8	212815629	212815653	151.00	-24.19
CAediting_138183	chr1_212815653_+	ENSG00000203705.9	ENST00000527693	hsa-miR-4691-3p	212815650	212815656	7mer-m8	212815630	212815657	154.00	-25.93
CAediting_138188	chr1_212815744_+	ENSG00000203705.9	ENST00000366973	hsa-miR-1289	212815742	212815748	7mer-m8	212815728	212815749	154.00	-21.14
CAediting_138188	chr1_212815744_+	ENSG00000203705.9	ENST00000366973	hsa-miR-1289	212815742	212815748	7mer-m8	212815728	212815749	154.00	-21.14
CAediting_138188	chr1_212815744_+	ENSG00000203705.9	ENST00000525574	hsa-miR-1289	212815742	212815748	7mer-m8	212815728	212815749	154.00	-21.14
CAediting_138188	chr1_212815744_+	ENSG00000203705.9	ENST00000525574	hsa-miR-1289	212815742	212815748	7mer-m8	212815728	212815749	154.00	-21.14
CAediting_138188	chr1_212815744_+	ENSG00000203705.9	ENST00000527693	hsa-miR-1289	212815742	212815748	7mer-m8	212815728	212815749	154.00	-21.14
CAediting_138188	chr1_212815744_+	ENSG00000203705.9	ENST00000527693	hsa-miR-1289	212815742	212815748	7mer-m8	212815728	212815749	154.00	-21.14
CAediting_138193	chr1_212816262_+	ENSG00000203705.9	ENST00000366973	hsa-miR-371b-5p	212816257	212816263	7mer-m8	212816243	212816264	147.00	-10.64
CAediting_138193	chr1_212816262_+	ENSG00000203705.9	ENST00000366973	hsa-miR-373-5p	212816257	212816263	7mer-m8	212816243	212816264	142.00	-14.80
CAediting_138193	chr1_212816262_+	ENSG00000203705.9	ENST00000366973	hsa-miR-616-5p	212816257	212816263	7mer-m8	212816242	212816264	144.00	-14.08
CAediting_138193	chr1_212816262_+	ENSG00000203705.9	ENST00000525574	hsa-miR-371b-5p	212816257	212816263	7mer-m8	212816243	212816264	147.00	-10.64
CAediting_138193	chr1_212816262_+	ENSG00000203705.9	ENST00000525574	hsa-miR-373-5p	212816257	212816263	7mer-m8	212816243	212816264	142.00	-14.80
CAediting_138193	chr1_212816262_+	ENSG00000203705.9	ENST00000525574	hsa-miR-616-5p	212816257	212816263	7mer-m8	212816242	212816264	144.00	-14.08
CAediting_138189	chr1_212815785_+	ENSG00000203705.9	ENST00000366973	hsa-miR-3189-3p	212815779	212815785	7mer-m8	212815764	212815786	149.00	-24.33
CAediting_138189	chr1_212815785_+	ENSG00000203705.9	ENST00000366973	hsa-miR-6813-3p	212815780	212815786	7mer-m8	212815767	212815787	140.00	-12.55
CAediting_138189	chr1_212815785_+	ENSG00000203705.9	ENST00000525574	hsa-miR-3189-3p	212815779	212815785	7mer-m8	212815764	212815786	149.00	-24.33
CAediting_138189	chr1_212815785_+	ENSG00000203705.9	ENST00000525574	hsa-miR-6813-3p	212815780	212815786	7mer-m8	212815767	212815787	140.00	-12.55
CAediting_138189	chr1_212815785_+	ENSG00000203705.9	ENST00000527693	hsa-miR-3189-3p	212815779	212815785	7mer-m8	212815764	212815786	149.00	-24.33
CAediting_138189	chr1_212815785_+	ENSG00000203705.9	ENST00000527693	hsa-miR-6813-3p	212815780	212815786	7mer-m8	212815767	212815787	140.00	-12.55

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_138192	chr1_212816237_+	ENSG00000203705.9	ENST00000366973	hsa-miR-1200	212816233	212816239	7mer-m8	212816219	212816240	141	-17.93
CAediting_138182	chr1_212815649_+	ENSG00000203705.9	ENST00000366973	hsa-miR-12126	212815645	212815652	8mer-1a	212815629	212815652	147	-12.83
CAediting_138192	chr1_212816237_+	ENSG00000203705.9	ENST00000366973	hsa-miR-1238-5p	212816230	212816236	7mer-m8	212816213	212816237	146	-20.83
CAediting_138182	chr1_212815649_+	ENSG00000203705.9	ENST00000366973	hsa-miR-1273h-5p	212815642	212815649	8mer-1a	212815629	212815649	151	-20.57
CAediting_138186	chr1_212815685_+	ENSG00000203705.9	ENST00000366973	hsa-miR-1285-3p	212815679	212815685	7mer-m8	212815665	212815686	140	-16.01
CAediting_138186	chr1_212815685_+	ENSG00000203705.9	ENST00000366973	hsa-miR-1285-3p	212815679	212815685	7mer-m8	212815665	212815686	140	-16.01
CAediting_138179	chr1_212815617_+	ENSG00000203705.9	ENST00000366973	hsa-miR-204-3p	212815611	212815617	7mer-m8	212815598	212815618	145	-19.74
CAediting_138182	chr1_212815649_+	ENSG00000203705.9	ENST00000366973	hsa-miR-30b-3p	212815642	212815649	8mer-1a	212815628	212815649	150	-16.36
CAediting_138186	chr1_212815685_+	ENSG00000203705.9	ENST00000366973	hsa-miR-3187-5p	212815679	212815685	7mer-m8	212815659	212815686	152	-25.55
CAediting_138179	chr1_212815617_+	ENSG00000203705.9	ENST00000366973	hsa-miR-3192-5p	212815612	212815617	6mer	212815593	212815618	152	-28.88
CAediting_138182	chr1_212815649_+	ENSG00000203705.9	ENST00000366973	hsa-miR-3689a-3p	212815642	212815649	8mer-1a	212815629	212815649	147	-17.57
CAediting_138182	chr1_212815649_+	ENSG00000203705.9	ENST00000366973	hsa-miR-3689b-3p	212815642	212815649	8mer-1a	212815629	212815649	147	-17.62
CAediting_138182	chr1_212815649_+	ENSG00000203705.9	ENST00000366973	hsa-miR-3689c	212815642	212815649	8mer-1a	212815629	212815649	147	-17.62
CAediting_138187	chr1_212815732_+	ENSG00000203705.9	ENST00000366973	hsa-miR-4293	212815729	212815735	7mer-m8	212815720	212815736	146	-21.19
CAediting_138181	chr1_212815641_+	ENSG00000203705.9	ENST00000366973	hsa-miR-4478	212815638	212815644	7mer-m8	212815630	212815645	153	-28.34
CAediting_138192	chr1_212816237_+	ENSG00000203705.9	ENST00000366973	hsa-miR-4758-5p	212816230	212816236	7mer-m8	212816215	212816237	148	-19.68
CAediting_138181	chr1_212815641_+	ENSG00000203705.9	ENST00000366973	hsa-miR-485-5p	212815639	212815645	7mer-m8	212815625	212815646	148	-16.79
CAediting_138179	chr1_212815617_+	ENSG00000203705.9	ENST00000366973	hsa-miR-490-3p	212815614	212815620	7mer-m8	212815601	212815621	145	-13.22
CAediting_138194	chr1_212816269_+	ENSG00000203705.9	ENST00000366973	hsa-miR-510-5p	212816264	212816270	7mer-m8	212816250	212816271	140	-16.25
CAediting_138194	chr1_212816269_+	ENSG00000203705.9	ENST00000366973	hsa-miR-512-5p	212816265	212816270	6mer	212816249	212816271	141	-20.32
CAediting_138194	chr1_212816269_+	ENSG00000203705.9	ENST00000366973	hsa-miR-512-5p	212816265	212816270	6mer	212816249	212816271	141	-20.32
CAediting_138186	chr1_212815685_+	ENSG00000203705.9	ENST00000366973	hsa-miR-5189-5p	212815679	212815685	7mer-m8	212815661	212815686	149	-24.02
CAediting_138183	chr1_212815653_+	ENSG00000203705.9	ENST00000366973	hsa-miR-5690	212815650	212815656	7mer-m8	212815637	212815657	145	-16.74
CAediting_138186	chr1_212815685_+	ENSG00000203705.9	ENST00000366973	hsa-miR-612	212815679	212815685	7mer-m8	212815662	212815686	147	-25.88
CAediting_138190	chr1_212815803_+	ENSG00000203705.9	ENST00000366973	hsa-miR-6514-3p	212815796	212815802	7mer-m8	212815783	212815803	155	-17.54
CAediting_138181	chr1_212815641_+	ENSG00000203705.9	ENST00000366973	hsa-miR-6734-5p	212815635	212815640	6mer	212815618	212815641	140	-22.72
CAediting_138182	chr1_212815649_+	ENSG00000203705.9	ENST00000366973	hsa-miR-6779-5p	212815642	212815649	8mer-1a	212815631	212815649	148	-22.49
CAediting_138190	chr1_212815803_+	ENSG00000203705.9	ENST00000366973	hsa-miR-6847-3p	212815801	212815807	7mer-m8	212815786	212815808	153	-22.19
CAediting_138186	chr1_212815685_+	ENSG00000203705.9	ENST00000366973	hsa-miR-6860	212815679	212815685	7mer-m8	212815664	212815686	150	-20.88
CAediting_138181	chr1_212815641_+	ENSG00000203705.9	ENST00000366973	hsa-miR-7160-5p	212815636	212815642	7mer-m8	212815623	212815643	143	-19.52
CAediting_138182	chr1_212815649_+	ENSG00000203705.9	ENST00000366973	hsa-miR-887-5p	212815643	212815649	7mer-m8	212815631	212815650	144	-18.12
CAediting_138192	chr1_212816237_+	ENSG00000203705.9	ENST00000525574	hsa-miR-1200	212816233	212816239	7mer-m8	212816219	212816240	141	-17.93
CAediting_138182	chr1_212815649_+	ENSG00000203705.9	ENST00000525574	hsa-miR-12126	212815645	212815652	8mer-1a	212815629	212815652	147	-12.83
CAediting_138192	chr1_212816237_+	ENSG00000203705.9	ENST00000525574	hsa-miR-1238-5p	212816230	212816236	7mer-m8	212816213	212816237	146	-20.83
CAediting_138182	chr1_212815649_+	ENSG00000203705.9	ENST00000525574	hsa-miR-1273h-5p	212815642	212815649	8mer-1a	212815629	212815649	151	-20.57
CAediting_138186	chr1_212815685_+	ENSG00000203705.9	ENST00000525574	hsa-miR-1285-3p	212815679	212815685	7mer-m8	212815665	212815686	140	-16.01
CAediting_138186	chr1_212815685_+	ENSG00000203705.9	ENST00000525574	hsa-miR-1285-3p	212815679	212815685	7mer-m8	212815665	212815686	140	-16.01
CAediting_138179	chr1_212815617_+	ENSG00000203705.9	ENST00000525574	hsa-miR-204-3p	212815611	212815617	7mer-m8	212815598	212815618	145	-19.74
CAediting_138182	chr1_212815649_+	ENSG00000203705.9	ENST00000525574	hsa-miR-30b-3p	212815642	212815649	8mer-1a	212815628	212815649	150	-16.36
CAediting_138186	chr1_212815685_+	ENSG00000203705.9	ENST00000525574	hsa-miR-3187-5p	212815679	212815685	7mer-m8	212815659	212815686	152	-25.55
CAediting_138179	chr1_212815617_+	ENSG00000203705.9	ENST00000525574	hsa-miR-3192-5p	212815612	212815617	6mer	212815593	212815618	152	-28.88
CAediting_138182	chr1_212815649_+	ENSG00000203705.9	ENST00000525574	hsa-miR-3689a-3p	212815642	212815649	8mer-1a	212815629	212815649	147	-17.57
CAediting_138182	chr1_212815649_+	ENSG00000203705.9	ENST00000525574	hsa-miR-3689b-3p	212815642	212815649	8mer-1a	212815629	212815649	147	-17.62
CAediting_138182	chr1_212815649_+	ENSG00000203705.9	ENST00000525574	hsa-miR-3689c	212815642	212815649	8mer-1a	212815629	212815649	147	-17.62
CAediting_138187	chr1_212815732_+	ENSG00000203705.9	ENST00000525574	hsa-miR-4293	212815729	212815735	7mer-m8	212815720	212815736	146	-21.19
CAediting_138181	chr1_212815641_+	ENSG00000203705.9	ENST00000525574	hsa-miR-4478	212815638	212815644	7mer-m8	212815630	212815645	153	-28.34
CAediting_138192	chr1_212816237_+	ENSG00000203705.9	ENST00000525574	hsa-miR-4758-5p	212816230	212816236	7mer-m8	212816215	212816237	148	-19.68
CAediting_138181	chr1_212815641_+	ENSG00000203705.9	ENST00000525574	hsa-miR-485-5p	212815639	212815645	7mer-m8	212815625	212815646	148	-16.79
CAediting_138179	chr1_212815617_+	ENSG00000203705.9	ENST00000525574	hsa-miR-490-3p	212815614	212815620	7mer-m8	212815601	212815621	145	-13.22
CAediting_138194	chr1_212816269_+	ENSG00000203705.9	ENST00000525574	hsa-miR-510-5p	212816264	212816270	7mer-m8	212816250	212816271	140	-16.25
CAediting_138194	chr1_212816269_+	ENSG00000203705.9	ENST00000525574	hsa-miR-512-5p	212816265	212816270	6mer	212816249	212816271	141	-20.32
CAediting_138194	chr1_212816269_+	ENSG00000203705.9	ENST00000525574	hsa-miR-512-5p	212816265	212816270	6mer	212816249	212816271	141	-20.32
CAediting_138186	chr1_212815685_+	ENSG00000203705.9	ENST00000525574	hsa-miR-5189-5p	212815679	212815685	7mer-m8	212815661	212815686	149	-24.02
CAediting_138183	chr1_212815653_+	ENSG00000203705.9	ENST00000525574	hsa-miR-5690	212815650	212815656	7mer-m8	212815637	212815657	145	-16.74
CAediting_138186	chr1_212815685_+	ENSG00000203705.9	ENST00000525574	hsa-miR-612	212815679	212815685	7mer-m8	212815662	212815686	147	-25.88
CAediting_138190	chr1_212815803_+	ENSG00000203705.9	ENST00000525574	hsa-miR-6514-3p	212815796	212815802	7mer-m8	212815783	212815803	155	-17.54
CAediting_138181	chr1_212815641_+	ENSG00000203705.9	ENST00000525574	hsa-miR-6734-5p	212815635	212815640	6mer	212815618	212815641	140	-22.72
CAediting_138182	chr1_212815649_+	ENSG00000203705.9	ENST00000525574	hsa-miR-6779-5p	212815642	212815649	8mer-1a	212815631	212815649	148	-22.49
CAediting_138190	chr1_212815803_+	ENSG00000203705.9	ENST00000525574	hsa-miR-6847-3p	212815801	212815807	7mer-m8	212815786	212815808	153	-22.19
CAediting_138186	chr1_212815685_+	ENSG00000203705.9	ENST00000525574	hsa-miR-6860	212815679	212815685	7mer-m8	212815664	212815686	150	-20.88
CAediting_138181	chr1_212815641_+	ENSG00000203705.9	ENST00000525574	hsa-miR-7160-5p	212815636	212815642	7mer-m8	212815623	212815643	143	-19.52
CAediting_138182	chr1_212815649_+	ENSG00000203705.9	ENST00000525574	hsa-miR-887-5p	212815643	212815649	7mer-m8	212815631	212815650	144	-18.12
CAediting_138182	chr1_212815649_+	ENSG00000203705.9	ENST00000527693	hsa-miR-12126	212815645	212815652	8mer-1a	212815629	212815652	147	-12.83
CAediting_138182	chr1_212815649_+	ENSG00000203705.9	ENST00000527693	hsa-miR-1273h-5p	212815642	212815649	8mer-1a	212815629	212815649	151	-20.57
CAediting_138186	chr1_212815685_+	ENSG00000203705.9	ENST00000527693	hsa-miR-1285-3p	212815679	212815685	7mer-m8	212815665	212815686	140	-16.01
CAediting_138186	chr1_212815685_+	ENSG00000203705.9	ENST00000527693	hsa-miR-1285-3p	212815679	212815685	7mer-m8	212815665	212815686	140	-16.01
CAediting_138179	chr1_212815617_+	ENSG00000203705.9	ENST00000527693	hsa-miR-204-3p	212815611	212815617	7mer-m8	212815598	212815618	145	-19.74
CAediting_138182	chr1_212815649_+	ENSG00000203705.9	ENST00000527693	hsa-miR-30b-3p	212815642	212815649	8mer-1a	212815628	212815649	150	-16.36
CAediting_138186	chr1_212815685_+	ENSG00000203705.9	ENST00000527693	hsa-miR-3187-5p	212815679	212815685	7mer-m8	212815659	212815686	152	-25.55
CAediting_138179	chr1_212815617_+	ENSG00000203705.9	ENST00000527693	hsa-miR-3192-5p	212815612	212815617	6mer	212815593	212815618	152	-28.88
CAediting_138182	chr1_212815649_+	ENSG00000203705.9	ENST00000527693	hsa-miR-3689a-3p	212815642	212815649	8mer-1a	212815629	212815649	147	-17.57
CAediting_138182	chr1_212815649_+	ENSG00000203705.9	ENST00000527693	hsa-miR-3689b-3p	212815642	212815649	8mer-1a	212815629	212815649	147	-17.62
CAediting_138182	chr1_212815649_+	ENSG00000203705.9	ENST00000527693	hsa-miR-3689c	212815642	212815649	8mer-1a	212815629	212815649	147	-17.62
CAediting_138187	chr1_212815732_+	ENSG00000203705.9	ENST00000527693	hsa-miR-4293	212815729	212815735	7mer-m8	212815720	212815736	146	-21.19
CAediting_138181	chr1_212815641_+	ENSG00000203705.9	ENST00000527693	hsa-miR-4478	212815638	212815644	7mer-m8	212815630	212815645	153	-28.34
CAediting_138181	chr1_212815641_+	ENSG00000203705.9	ENST00000527693	hsa-miR-485-5p	212815639	212815645	7mer-m8	212815625	212815646	148	-16.79
CAediting_138179	chr1_212815617_+	ENSG00000203705.9	ENST00000527693	hsa-miR-490-3p	212815614	212815620	7mer-m8	212815601	212815621	145	-13.22
CAediting_138186	chr1_212815685_+	ENSG00000203705.9	ENST00000527693	hsa-miR-5189-5p	212815679	212815685	7mer-m8	212815661	212815686	149	-24.02
CAediting_138183	chr1_212815653_+	ENSG00000203705.9	ENST00000527693	hsa-miR-5690	212815650	212815656	7mer-m8	212815637	212815657	145	-16.74
CAediting_138186	chr1_212815685_+	ENSG00000203705.9	ENST00000527693	hsa-miR-612	212815679	212815685	7mer-m8	212815662	212815686	147	-25.88
CAediting_138190	chr1_212815803_+	ENSG00000203705.9	ENST00000527693	hsa-miR-6514-3p	212815796	212815802	7mer-m8	212815783	212815803	155	-17.54
CAediting_138181	chr1_212815641_+	ENSG00000203705.9	ENST00000527693	hsa-miR-6734-5p	212815635	212815640	6mer	212815618	212815641	140	-22.72
CAediting_138182	chr1_212815649_+	ENSG00000203705.9	ENST00000527693	hsa-miR-6779-5p	212815642	212815649	8mer-1a	212815631	212815649	148	-22.49
CAediting_138190	chr1_212815803_+	ENSG00000203705.9	ENST00000527693	hsa-miR-6847-3p	212815801	212815807	7mer-m8	212815786	212815808	153	-22.19
CAediting_138186	chr1_212815685_+	ENSG00000203705.9	ENST00000527693	hsa-miR-6860	212815679	212815685	7mer-m8	212815664	212815686	150	-20.88
CAediting_138181	chr1_212815641_+	ENSG00000203705.9	ENST00000527693	hsa-miR-7160-5p	212815636	212815642	7mer-m8	212815623	212815643	143	-19.52
CAediting_138182	chr1_212815649_+	ENSG00000203705.9	ENST00000527693	hsa-miR-887-5p	212815643	212815649	7mer-m8	212815631	212815650	144	-18.12

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_393	chr1_1167164_+	ENSG00000203705.9	ENST00000532324	hsa-miR-200b-3p	212815198	212815204	7mer-m8	212815181	212815205	154	-19.63
CAediting_393	chr1_1167164_+	ENSG00000203705.9	ENST00000526641	hsa-miR-200b-3p	212815198	212815204	7mer-m8	212815181	212815205	154	-19.63
CAediting_393	chr1_1167164_+	ENSG00000203705.9	ENST00000531963	hsa-miR-200b-3p	212815198	212815204	7mer-m8	212815181	212815205	154	-19.63
CAediting_846604	chr11_93733708_-	ENSG00000203705.9	ENST00000366973	hsa-miR-1304-3p	212815623	212815628	6mer	212815608	212815629	146	-18.78
CAediting_393	chr1_1167164_+	ENSG00000203705.9	ENST00000366973	hsa-miR-200b-3p	212815198	212815204	7mer-m8	212815181	212815205	154	-19.63
CAediting_393	chr1_1167164_+	ENSG00000203705.9	ENST00000526997	hsa-miR-200b-3p	212815198	212815204	7mer-m8	212815181	212815205	154	-19.63
CAediting_846604	chr11_93733708_-	ENSG00000203705.9	ENST00000525574	hsa-miR-1304-3p	212815623	212815628	6mer	212815608	212815629	146	-18.78
CAediting_393	chr1_1167164_+	ENSG00000203705.9	ENST00000525574	hsa-miR-200b-3p	212815198	212815204	7mer-m8	212815181	212815205	154	-19.63
CAediting_846604	chr11_93733708_-	ENSG00000203705.9	ENST00000527693	hsa-miR-1304-3p	212815623	212815628	6mer	212815608	212815629	146	-18.78
CAediting_393	chr1_1167164_+	ENSG00000203705.9	ENST00000527693	hsa-miR-200b-3p	212815198	212815204	7mer-m8	212815181	212815205	154	-19.63

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1306324	chr19_13836464_-	ENSG00000203705.9	ENST00000366973	hsa-miR-27a-3p	212815495	212815501	7mer-m8	212815479	212815502	148	-14.33
CAediting_1306324	chr19_13836464_-	ENSG00000203705.9	ENST00000525574	hsa-miR-27a-3p	212815495	212815501	7mer-m8	212815479	212815502	148	-14.33
CAediting_1306324	chr19_13836464_-	ENSG00000203705.9	ENST00000527693	hsa-miR-27a-3p	212815495	212815501	7mer-m8	212815479	212815502	148	-14.33

Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for TATDN3

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000366973.7	protein_coding
ENST00000366974.7	protein_coding
ENST00000525574.4	nonsense_mediated_decay
ENST00000527693.1	protein_coding

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_138179	ENST00000366973.7	chr1_212815617_+	-659.80	-656.70	-692.20
CAediting_138180	ENST00000366973.7	chr1_212815624_+	-656.50	-656.70	-692.20
CAediting_138181	ENST00000366973.7	chr1_212815641_+	-657.10	-656.70	-692.20
CAediting_138182	ENST00000366973.7	chr1_212815649_+	-660.10	-656.70	-692.20
CAediting_138183	ENST00000366973.7	chr1_212815653_+	-663.30	-656.70	-692.20
CAediting_138184	ENST00000366973.7	chr1_212815663_+	-659.10	-656.70	-692.20
CAediting_138185	ENST00000366973.7	chr1_212815665_+	-659.20	-656.70	-692.20
CAediting_138186	ENST00000366973.7	chr1_212815685_+	-660.60	-656.70	-692.20
CAediting_138187	ENST00000366973.7	chr1_212815732_+	-661.70	-656.70	-692.20
CAediting_138188	ENST00000366973.7	chr1_212815744_+	-660.80	-656.70	-692.20
CAediting_138189	ENST00000366973.7	chr1_212815785_+	-660.20	-656.70	-692.20
CAediting_138190	ENST00000366973.7	chr1_212815803_+	-657.10	-656.70	-692.20
CAediting_138191	ENST00000366973.7	chr1_212816223_+	-656.30	-656.70	-692.20
CAediting_138192	ENST00000366973.7	chr1_212816237_+	-660.30	-656.70	-692.20
CAediting_138193	ENST00000366973.7	chr1_212816262_+	-659.40	-656.70	-692.20
CAediting_138194	ENST00000366973.7	chr1_212816269_+	-663.10	-656.70	-692.20
CAediting_138195	ENST00000366973.7	chr1_212816294_+	-662.50	-656.70	-692.20
CAediting_138179	ENST00000366974.7	chr1_212815617_+	-688.30	-685.20	-720.70
CAediting_138180	ENST00000366974.7	chr1_212815624_+	-685.00	-685.20	-720.70
CAediting_138181	ENST00000366974.7	chr1_212815641_+	-685.60	-685.20	-720.70
CAediting_138182	ENST00000366974.7	chr1_212815649_+	-688.60	-685.20	-720.70
CAediting_138183	ENST00000366974.7	chr1_212815653_+	-691.80	-685.20	-720.70
CAediting_138184	ENST00000366974.7	chr1_212815663_+	-687.60	-685.20	-720.70
CAediting_138185	ENST00000366974.7	chr1_212815665_+	-687.70	-685.20	-720.70
CAediting_138186	ENST00000366974.7	chr1_212815685_+	-689.10	-685.20	-720.70
CAediting_138187	ENST00000366974.7	chr1_212815732_+	-690.20	-685.20	-720.70
CAediting_138188	ENST00000366974.7	chr1_212815744_+	-689.30	-685.20	-720.70
CAediting_138189	ENST00000366974.7	chr1_212815785_+	-688.70	-685.20	-720.70
CAediting_138190	ENST00000366974.7	chr1_212815803_+	-685.60	-685.20	-720.70
CAediting_138191	ENST00000366974.7	chr1_212816223_+	-684.80	-685.20	-720.70
CAediting_138192	ENST00000366974.7	chr1_212816237_+	-688.80	-685.20	-720.70
CAediting_138193	ENST00000366974.7	chr1_212816262_+	-687.90	-685.20	-720.70
CAediting_138194	ENST00000366974.7	chr1_212816269_+	-691.60	-685.20	-720.70
CAediting_138195	ENST00000366974.7	chr1_212816294_+	-691.00	-685.20	-720.70
CAediting_138179	ENST00000525574.4	chr1_212815617_+	-607.40	-604.00	-639.50
CAediting_138180	ENST00000525574.4	chr1_212815624_+	-603.80	-604.00	-639.50
CAediting_138181	ENST00000525574.4	chr1_212815641_+	-604.40	-604.00	-639.50
CAediting_138182	ENST00000525574.4	chr1_212815649_+	-607.40	-604.00	-639.50
CAediting_138183	ENST00000525574.4	chr1_212815653_+	-610.60	-604.00	-639.50
CAediting_138184	ENST00000525574.4	chr1_212815663_+	-606.70	-604.00	-639.50
CAediting_138185	ENST00000525574.4	chr1_212815665_+	-606.50	-604.00	-639.50
CAediting_138186	ENST00000525574.4	chr1_212815685_+	-607.90	-604.00	-639.50
CAediting_138187	ENST00000525574.4	chr1_212815732_+	-609.00	-604.00	-639.50
CAediting_138188	ENST00000525574.4	chr1_212815744_+	-608.10	-604.00	-639.50
CAediting_138189	ENST00000525574.4	chr1_212815785_+	-607.50	-604.00	-639.50
CAediting_138190	ENST00000525574.4	chr1_212815803_+	-604.70	-604.00	-639.50
CAediting_138191	ENST00000525574.4	chr1_212816223_+	-603.60	-604.00	-639.50
CAediting_138192	ENST00000525574.4	chr1_212816237_+	-607.60	-604.00	-639.50
CAediting_138193	ENST00000525574.4	chr1_212816262_+	-606.70	-604.00	-639.50
CAediting_138194	ENST00000525574.4	chr1_212816269_+	-610.40	-604.00	-639.50
CAediting_138195	ENST00000525574.4	chr1_212816294_+	-610.10	-604.00	-639.50
CAediting_138179	ENST00000527693.1	chr1_212815617_+	-258.00	-254.10	-273.20
CAediting_138180	ENST00000527693.1	chr1_212815624_+	-252.80	-254.10	-273.20
CAediting_138181	ENST00000527693.1	chr1_212815641_+	-254.10	-254.10	-273.20
CAediting_138182	ENST00000527693.1	chr1_212815649_+	-254.00	-254.10	-273.20
CAediting_138183	ENST00000527693.1	chr1_212815653_+	-255.70	-254.10	-273.20
CAediting_138184	ENST00000527693.1	chr1_212815663_+	-257.30	-254.10	-273.20
CAediting_138185	ENST00000527693.1	chr1_212815665_+	-257.20	-254.10	-273.20
CAediting_138186	ENST00000527693.1	chr1_212815685_+	-256.70	-254.10	-273.20
CAediting_138187	ENST00000527693.1	chr1_212815732_+	-258.10	-254.10	-273.20
CAediting_138188	ENST00000527693.1	chr1_212815744_+	-257.20	-254.10	-273.20
CAediting_138189	ENST00000527693.1	chr1_212815785_+	-258.70	-254.10	-273.20
CAediting_138190	ENST00000527693.1	chr1_212815803_+	-255.70	-254.10	-273.20

Top

Relation with ADAR for TATDN3

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
BLCA	CAediting_138191	chr1_212816223_+	0.00700827058639701	0.233660261821069	.	.	.	.
LGG	CAediting_138191	chr1_212816223_+	1.17962098459951e-11	0.368891547264805	.	.	.	.
BRCA	CAediting_138191	chr1_212816223_+	1.87391035410023e-30	0.406974300555798	.	.	.	.
CESC	CAediting_138191	chr1_212816223_+	0.000795617223331031	0.296231755421568	.	.	.	.
LUAD	CAediting_138191	chr1_212816223_+	2.59310600301826e-08	0.34436691223363	.	.	.	.
LUSC	CAediting_138191	chr1_212816223_+	8.47734688969195e-07	0.332081219753791	.	.	.	.
GBM	CAediting_138191	chr1_212816223_+	2.69472656314342e-06	0.474070067914146	.	.	.	.
PRAD	CAediting_138191	chr1_212816223_+	2.66622349425576e-07	0.405352685217899	.	.	.	.
HNSC	CAediting_138191	chr1_212816223_+	0.010772235504267	0.24011034993716	.	.	.	.
STAD	CAediting_138191	chr1_212816223_+	0.022229590809437	0.194539290703482	.	.	.	.
THCA	CAediting_138191	chr1_212816223_+	0.00643816418262947	0.186582540956398	.	.	.	.
KIRC	CAediting_138191	chr1_212816223_+	0.041591404390865	0.120784752244011	.	.	.	.
UCEC	CAediting_138191	chr1_212816223_+	0.000320774795407589	0.280894208303064	.	.	.	.
OV	CAediting_138191	chr1_212816223_+	0.00494674511692924	0.189708833898303	.	.	0.0289178315976974	0.147995226639778
PCPG	CAediting_138191	chr1_212816223_+	1.33054193885005e-06	0.390236628932283	.	.	.	.
TGCT	CAediting_138191	chr1_212816223_+	4.7157196600948e-08	0.553584501997542	.	.	.	.
THYM	CAediting_138191	chr1_212816223_+	0.000415923355398266	0.471669902699442	.	.	.	.
BRCA	CAediting_138195	chr1_212816294_+	0.00341985590500523	0.240755611338255	.	.	.	.

Top

Relation with cancer stages for TATDN3

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
BRCA	pathologic_stage	CAediting_138195	chr1_212816294_+	0.0241262841230179	0.188542078552187
KIRC	pathologic_stage	CAediting_138191	chr1_212816223_+	0.0408358919357303	0.121232353615082
LUAD	pathologic_stage	CAediting_138191	chr1_212816223_+	0.0191691598619463	0.149257538903486
STAD	pathologic_stage	CAediting_138191	chr1_212816223_+	0.0209196841270426	0.200867376867192

Top

Relation with survival for TATDN3

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
COAD	CAediting_138191	chr1_212816223_+	0.0205199309723412	0.0390828	196224

Top

RelatedDrugs for TATDN3

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

Top

RelatedDiseases for TATDN3

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene