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![]() | Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples |
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![]() | The effects of the RNA editing to the stability of the RNA structures |
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Editing gene: NDUFA11 (CAeditome ID:126328) |
Gene summary for NDUFA11 |
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Gene information | Gene symbol | NDUFA11 | Gene ID | 126328 |
Gene name | NADH:ubiquinone oxidoreductase subunit A11 | |
Synonyms | B14.7|CI-B14.7|MC1DN14 | |
Cytomap | 19p13.3 | |
Type of gene | protein-coding | |
Description | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 11, 14.7kDaNADH-ubiquinone oxidoreductase subunit B14.7complex I B14.7 subunit | |
Modification date | 20210518 | |
UniProtAcc | Q86Y39 | |
Context |
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Gene | GO ID | GO term | PubMed ID |
NDUFA11 | GO:0005739 | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11 | 0000052 |
NDUFA11 | GO:0005747 | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11 | 12611891 |
NDUFA11 | GO:0005747 | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11 | 27626371 |
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RNA A-to-I events for NDUFA11 |
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CAediting_1280252(5891392, -), CAediting_1280253(5893215, -), CAediting_1280254(5893223, -), CAediting_1280255(5893253, -), CAediting_1280256(5893254, -), CAediting_1280257(5893278, -), CAediting_1280258(5899575, -), CAediting_1280259(5899588, -), CAediting_1280260(5899589, -), CAediting_1280261(5902559, -), |
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RNA editing positional annotations for NDUFA11 using Annovar |
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CAeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
CAediting_1280253 | chr19_5893215_- | nonsynonymous SNV | ENST00000418389.5 | c.A389G | p.Q130R | D | . | N |
CAediting_1280257 | chr19_5893278_- | nonsynonymous SNV | ENST00000418389.5 | c.A326G | p.H109R | D | . | N |
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CAeditome ID | Position | Variant type |
CAediting_1280252 | chr19_5891392_- | UTR3 |
CAediting_1280253 | chr19_5893215_- | exonic |
CAediting_1280254 | chr19_5893223_- | exonic |
CAediting_1280255 | chr19_5893253_- | exonic |
CAediting_1280256 | chr19_5893254_- | exonic |
CAediting_1280257 | chr19_5893278_- | exonic |
CAediting_1280258 | chr19_5899575_- | intronic |
CAediting_1280259 | chr19_5899588_- | intronic |
CAediting_1280260 | chr19_5899589_- | intronic |
CAediting_1280261 | chr19_5902559_- | ncRNA_exonic |
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CAeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
CAediting_1280252 | chr19_5891392_- | SINE | Alu | AluSx1 |
CAediting_1280253 | chr19_5893215_- | SINE | Alu | AluJr |
CAediting_1280254 | chr19_5893223_- | SINE | Alu | AluJr |
CAediting_1280255 | chr19_5893253_- | SINE | Alu | AluJr |
CAediting_1280256 | chr19_5893254_- | SINE | Alu | AluJr |
CAediting_1280257 | chr19_5893278_- | SINE | Alu | AluJr |
CAediting_1280258 | chr19_5899575_- | SINE | Alu | AluSx1 |
CAediting_1280259 | chr19_5899588_- | SINE | Alu | AluSx1 |
CAediting_1280260 | chr19_5899589_- | SINE | Alu | AluSx1 |
CAediting_1280261 | chr19_5902559_- | SINE | Alu | AluJr |
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RNA A-to-I editing events in the alternative splicing sites for NDUFA11 |
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AStype | CAeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for NDUFA11 |
![]() * The grey color means N/A. |
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Protein coding region RNA A-to-I editings for NDUFA11 |
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The effects of the RNA editing to the miRNA binding sites for NDUFA11 |
**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page. |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_1280252 | chr19_5891392_- | ENSG00000174886.11 | ENST00000418389 | hsa-miR-5089-5p | 5891392 | 5891398 | 7mer-m8 | 5891391 | 5891409 | 146 | -13.74 |
CAediting_1280252 | chr19_5891392_- | ENSG00000174886.11 | ENST00000418389 | hsa-miR-6506-5p | 5891391 | 5891397 | 7mer-m8 | 5891390 | 5891412 | 144 | -16.19 |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_980496 | chr14_31014685_- | ENSG00000174886.11 | ENST00000418389 | hsa-miR-624-3p | 5891443 | 5891449 | 7mer-m8 | 5891442 | 5891462 | 148 | -14.35 |
CAediting_980496 | chr14_31014685_- | ENSG00000174886.11 | ENST00000418389 | hsa-miR-624-3p | 5892337 | 5892344 | 8mer-1a | 5892337 | 5892357 | 155 | -16.44 |
CAediting_748296 | chr10_51299626_+ | ENSG00000174886.11 | ENST00000592634 | hsa-miR-605-3p | 5895733 | 5895739 | 7mer-m8 | 5895732 | 5895754 | 150 | -15.68 |
CAediting_980496 | chr14_31014685_- | ENSG00000174886.11 | ENST00000592634 | hsa-miR-624-3p | 5896104 | 5896110 | 7mer-m8 | 5896103 | 5896124 | 143 | -18.03 |
CAediting_1054808 | chr15_66496985_- | ENSG00000174886.11 | ENST00000418389 | hsa-miR-4512 | 5892658 | 5892664 | 7mer-m8 | 5892657 | 5892679 | 151 | -27.99 |
CAediting_1054808 | chr15_66496985_- | ENSG00000174886.11 | ENST00000418389 | hsa-miR-4512 | 5892030 | 5892036 | 7mer-m8 | 5892029 | 5892050 | 145 | -17.99 |
CAediting_117844 | chr1_162342605_+ | ENSG00000174886.11 | ENST00000418389 | hsa-miR-556-3p | 5892520 | 5892526 | 7mer-m8 | 5892519 | 5892541 | 146 | -11.45 |
CAediting_1229414 | chr17_67471546_+ | ENSG00000174886.11 | ENST00000592634 | hsa-miR-548aa | 5895438 | 5895443 | 6mer | 5895437 | 5895460 | 140 | -21.52 |
CAediting_1368054 | chr19_46709310_- | ENSG00000174886.11 | ENST00000592634 | hsa-miR-320e | 5895479 | 5895485 | 7mer-m8 | 5895478 | 5895495 | 151 | -19.25 |
CAediting_1368054 | chr19_46709310_- | ENSG00000174886.11 | ENST00000592634 | hsa-miR-320e | 5895421 | 5895428 | 8mer-1a | 5895421 | 5895439 | 153 | -22.09 |
CAediting_86358 | chr1_109598906_+ | ENSG00000174886.11 | ENST00000592634 | hsa-miR-197-5p | 5896243 | 5896248 | 6mer | 5896242 | 5896264 | 144 | -30.52 |
CAediting_86358 | chr1_109598906_+ | ENSG00000174886.11 | ENST00000592634 | hsa-miR-197-5p | 5896376 | 5896382 | 7mer-m8 | 5896375 | 5896399 | 165 | -29.65 |
CAediting_86358 | chr1_109598906_+ | ENSG00000174886.11 | ENST00000592634 | hsa-miR-197-5p | 5896107 | 5896112 | 6mer | 5896106 | 5896128 | 152 | -36.5 |
CAediting_77128 | chr1_85133844_+ | ENSG00000174886.11 | ENST00000592634 | hsa-miR-4423-3p | 5895159 | 5895165 | 7mer-m8 | 5895158 | 5895178 | 145 | -16.04 |
CAediting_468389 | chr6_31355314_- | ENSG00000174886.11 | ENST00000592634 | hsa-miR-6891-5p | 5896232 | 5896239 | 8mer-1a | 5896232 | 5896250 | 157 | -33.72 |
CAediting_468389 | chr6_31355314_- | ENSG00000174886.11 | ENST00000592634 | hsa-miR-6891-5p | 5896204 | 5896211 | 8mer-1a | 5896204 | 5896222 | 145 | -19.87 |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_1524209 | chrX_134546392_- | ENSG00000174886.11 | ENST00000592634 | hsa-miR-503-5p | 5896298 | 5896303 | 6mer | 5896291 | 5896314 | 152 | -23.65 |
CAediting_1524209 | chrX_134546392_- | ENSG00000174886.11 | ENST00000592634 | hsa-miR-503-5p | 5896295 | 5896300 | 6mer | 5896291 | 5896314 | 152 | -23.65 |
CAediting_1524209 | chrX_134546392_- | ENSG00000174886.11 | ENST00000592634 | hsa-miR-503-5p | 5896292 | 5896297 | 6mer | 5896291 | 5896314 | 152 | -23.65 |
CAediting_1524209 | chrX_134546392_- | ENSG00000174886.11 | ENST00000592634 | hsa-miR-503-5p | 5896301 | 5896306 | 6mer | 5896291 | 5896314 | 152 | -23.65 |
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The effects of the RNA editing to the stability of the RNA structures for NDUFA11 |
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ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
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CAeditom_ID | ENST | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for NDUFA11 |
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Cancer | CAeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
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Relation with cancer stages for NDUFA11 |
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Cancer | Stage_type | CAeditomID | position | P-val | Coeff. |
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Relation with survival for NDUFA11 |
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Cancer | CAeditomID | position | KMpvalue | Coxpvalue | CoxHR |
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RelatedDrugs for NDUFA11 |
![]() (DrugBank Version 5.1.8 2021-01-03) |
Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
NDUFA11 | Q86Y39 | DB00157 | NADH | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11 | SmallMoleculeDrug | approved|nutraceutical |
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RelatedDiseases for NDUFA11 |
![]() (DisGeNet 7.0) |
Gene | Disease ID | Disease name | # pubmeds | Source |
NDUFA11 | C1838979 | MITOCHONDRIAL COMPLEX I DEFICIENCY | 3 | GENOMICS_ENGLAND;ORPHANET |
NDUFA11 | C0751651 | Mitochondrial Diseases | 1 | GENOMICS_ENGLAND |