CAeditome Logo

Home

Download

Statistics

Examples

Help

Contact
Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: ZNF573 (CAeditome ID:126231)

Gene summary for ZNF573

check button Gene summary
Gene informationGene symbol

ZNF573

Gene ID

126231

Gene namezinc finger protein 573
Synonyms-
Cytomap

19q13.12

Type of geneprotein-coding
Descriptionzinc finger protein 573
Modification date20210518
UniProtAcc

Q86YE8

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID

Top

RNA A-to-I events for ZNF573

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000189144.12
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_1343893(37735948, -), CAediting_1343894(37735956, -), CAediting_1343895(37735962, -), CAediting_1343896(37735977, -), CAediting_1343897(37735978, -), CAediting_1343898(37735979, -), CAediting_1343899(37735989, -), CAediting_1343900(37735999, -), CAediting_1343901(37736008, -), CAediting_1343902(37736009, -), CAediting_1343903(37736042, -), CAediting_1343904(37736043, -), CAediting_1343905(37736063, -), CAediting_1343906(37736069, -), CAediting_1343907(37736071, -), CAediting_1343908(37736077, -), CAediting_1343909(37736081, -), CAediting_1343910(37736087, -), CAediting_1343911(37736093, -), CAediting_1343912(37736098, -), CAediting_1343913(37736110, -), CAediting_1343914(37736111, -), CAediting_1343915(37736124, -), CAediting_1343916(37736131, -), CAediting_1343917(37736133, -), CAediting_1343918(37736136, -), CAediting_1343919(37736141, -), CAediting_1343920(37736143, -), CAediting_1343921(37736146, -), CAediting_1343922(37736160, -), CAediting_1343923(37736167, -), CAediting_1343924(37736171, -), CAediting_1343925(37736192, -), CAediting_1343926(37737151, -), CAediting_1343927(37737152, -), CAediting_1343928(37737153, -), CAediting_1343929(37737154, -), CAediting_1343930(37737173, -), CAediting_1343931(37737176, -), CAediting_1343932(37737185, -), CAediting_1343933(37737203, -), CAediting_1343934(37737210, -), CAediting_1343935(37737214, -), CAediting_1343936(37737227, -), CAediting_1343937(37737234, -), CAediting_1343938(37737235, -), CAediting_1343939(37737243, -), CAediting_1343940(37737259, -), CAediting_1343941(37737270, -), CAediting_1343942(37737276, -), CAediting_1343943(37737284, -), CAediting_1343944(37737298, -), CAediting_1343945(37737330, -), CAediting_1343946(37737331, -), CAediting_1343947(37737339, -), CAediting_1343948(37737343, -), CAediting_1343949(37737349, -), CAediting_1343950(37737353, -), CAediting_1343951(37737492, -), CAediting_1343952(37737506, -), CAediting_1343953(37737513, -), CAediting_1343954(37737535, -), CAediting_1343955(37737537, -), CAediting_1343956(37737553, -), CAediting_1343957(37737569, -), CAediting_1343958(37737571, -), CAediting_1343959(37737573, -), CAediting_1343960(37737930, -), CAediting_1343961(37737931, -), CAediting_1343962(37737951, -), CAediting_1343963(37737953, -), CAediting_1343964(37737954, -), CAediting_1343965(37737963, -), CAediting_1343966(37737981, -), CAediting_1343967(37737985, -), CAediting_1343968(37737992, -), CAediting_1343969(37738012, -), CAediting_1343970(37738013, -), CAediting_1343971(37738027, -), CAediting_1343972(37738031, -), CAediting_1343973(37738044, -), CAediting_1343974(37738054, -), CAediting_1343975(37738080, -), CAediting_1343976(37738090, -), CAediting_1343977(37738093, -), CAediting_1343978(37738094, -), CAediting_1343979(37738095, -), CAediting_1343980(37738096, -), CAediting_1343981(37738099, -), CAediting_1343982(37738110, -), CAediting_1343983(37738111, -), CAediting_1343984(37738118, -), CAediting_1343985(37738120, -), CAediting_1343986(37738137, -), CAediting_1343987(37738144, -), CAediting_1343988(37738149, -), CAediting_1343989(37738152, -), CAediting_1343990(37738165, -), CAediting_1343991(37738166, -), CAediting_1343992(37738179, -), CAediting_1343993(37738182, -), CAediting_1343994(37738188, -), CAediting_1343995(37753004, -), CAediting_1343996(37755067, -), CAediting_1343997(37755102, -), CAediting_1343998(37755108, -), CAediting_1343999(37755140, -), CAediting_1344000(37755241, -), CAediting_1344001(37758500, -), CAediting_1344002(37758548, -), CAediting_1344003(37763820, -), CAediting_1344004(37764485, -), CAediting_1344005(37764497, -), CAediting_1344006(37764498, -), CAediting_1344007(37764586, -), CAediting_1344008(37764639, -), CAediting_1344009(37765003, -), CAediting_1344010(37765008, -), CAediting_1344011(37765044, -), CAediting_1344012(37765050, -), CAediting_1344013(37765066, -), CAediting_1344014(37765070, -), CAediting_1344015(37765083, -), CAediting_1344016(37765085, -), CAediting_1344017(37765088, -), CAediting_1344018(37765788, -), CAediting_1344019(37765793, -), CAediting_1344020(37765794, -), CAediting_1344021(37765885, -), CAediting_1344022(37769483, -), CAediting_1344023(37769493, -), CAediting_1344024(37770562, -), CAediting_1344025(37772669, -), CAediting_1344026(37774206, -), CAediting_1344027(37774392, -), CAediting_1344028(37775052, -), CAediting_1344029(37775074, -), CAediting_1344030(37775077, -), CAediting_1344031(37775079, -), CAediting_1344032(37775109, -), CAediting_1344033(37775113, -), CAediting_1344034(37775114, -), CAediting_1344035(37775119, -), CAediting_1344036(37775128, -), CAediting_1344037(37775132, -), CAediting_1344038(37775138, -), CAediting_1344039(37775141, -), CAediting_1344040(37775145, -), CAediting_1344041(37775161, -), CAediting_1344042(37775163, -), CAediting_1344043(37775173, -), CAediting_1344044(37775177, -), CAediting_1344045(37777286, -), CAediting_1344046(37778452, -), CAediting_1344047(37778461, -),

Top

RNA editing positional annotations for ZNF573 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred
CAediting_1344002chr19_37758548_-nonsynonymous SNVENST00000339503.6c.A49Gp.S17GDBN

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_1343893chr19_37735948_-ncRNA_exonic
CAediting_1343894chr19_37735956_-ncRNA_exonic
CAediting_1343895chr19_37735962_-ncRNA_exonic
CAediting_1343896chr19_37735977_-ncRNA_exonic
CAediting_1343897chr19_37735978_-ncRNA_exonic
CAediting_1343898chr19_37735979_-ncRNA_exonic
CAediting_1343899chr19_37735989_-ncRNA_exonic
CAediting_1343900chr19_37735999_-ncRNA_exonic
CAediting_1343901chr19_37736008_-ncRNA_exonic
CAediting_1343902chr19_37736009_-ncRNA_exonic
CAediting_1343903chr19_37736042_-ncRNA_intronic
CAediting_1343904chr19_37736043_-ncRNA_intronic
CAediting_1343905chr19_37736063_-ncRNA_intronic
CAediting_1343906chr19_37736069_-ncRNA_intronic
CAediting_1343907chr19_37736071_-ncRNA_intronic
CAediting_1343908chr19_37736077_-ncRNA_intronic
CAediting_1343909chr19_37736081_-ncRNA_intronic
CAediting_1343910chr19_37736087_-ncRNA_intronic
CAediting_1343911chr19_37736093_-ncRNA_intronic
CAediting_1343912chr19_37736098_-ncRNA_intronic
CAediting_1343913chr19_37736110_-ncRNA_intronic
CAediting_1343914chr19_37736111_-ncRNA_intronic
CAediting_1343915chr19_37736124_-ncRNA_intronic
CAediting_1343916chr19_37736131_-ncRNA_intronic
CAediting_1343917chr19_37736133_-ncRNA_intronic
CAediting_1343918chr19_37736136_-ncRNA_intronic
CAediting_1343919chr19_37736141_-ncRNA_intronic
CAediting_1343920chr19_37736143_-ncRNA_intronic
CAediting_1343921chr19_37736146_-ncRNA_intronic
CAediting_1343922chr19_37736160_-ncRNA_intronic
CAediting_1343923chr19_37736167_-ncRNA_intronic
CAediting_1343924chr19_37736171_-ncRNA_intronic
CAediting_1343925chr19_37736192_-ncRNA_intronic
CAediting_1343926chr19_37737151_-ncRNA_intronic
CAediting_1343927chr19_37737152_-ncRNA_intronic
CAediting_1343928chr19_37737153_-ncRNA_intronic
CAediting_1343929chr19_37737154_-ncRNA_intronic
CAediting_1343930chr19_37737173_-ncRNA_intronic
CAediting_1343931chr19_37737176_-ncRNA_intronic
CAediting_1343932chr19_37737185_-ncRNA_intronic
CAediting_1343933chr19_37737203_-ncRNA_intronic
CAediting_1343934chr19_37737210_-ncRNA_intronic
CAediting_1343935chr19_37737214_-ncRNA_intronic
CAediting_1343936chr19_37737227_-ncRNA_intronic
CAediting_1343937chr19_37737234_-ncRNA_intronic
CAediting_1343938chr19_37737235_-ncRNA_intronic
CAediting_1343939chr19_37737243_-ncRNA_intronic
CAediting_1343940chr19_37737259_-ncRNA_intronic
CAediting_1343941chr19_37737270_-ncRNA_intronic
CAediting_1343942chr19_37737276_-ncRNA_intronic
CAediting_1343943chr19_37737284_-ncRNA_intronic
CAediting_1343944chr19_37737298_-ncRNA_intronic
CAediting_1343945chr19_37737330_-ncRNA_intronic
CAediting_1343946chr19_37737331_-ncRNA_intronic
CAediting_1343947chr19_37737339_-ncRNA_intronic
CAediting_1343948chr19_37737343_-ncRNA_intronic
CAediting_1343949chr19_37737349_-ncRNA_intronic
CAediting_1343950chr19_37737353_-ncRNA_intronic
CAediting_1343951chr19_37737492_-ncRNA_intronic
CAediting_1343952chr19_37737506_-ncRNA_intronic
CAediting_1343953chr19_37737513_-ncRNA_intronic
CAediting_1343954chr19_37737535_-ncRNA_intronic
CAediting_1343955chr19_37737537_-ncRNA_intronic
CAediting_1343956chr19_37737553_-ncRNA_intronic
CAediting_1343957chr19_37737569_-ncRNA_intronic
CAediting_1343958chr19_37737571_-ncRNA_intronic
CAediting_1343959chr19_37737573_-ncRNA_intronic
CAediting_1343960chr19_37737930_-ncRNA_intronic
CAediting_1343961chr19_37737931_-ncRNA_intronic
CAediting_1343962chr19_37737951_-ncRNA_intronic
CAediting_1343963chr19_37737953_-ncRNA_intronic
CAediting_1343964chr19_37737954_-ncRNA_intronic
CAediting_1343965chr19_37737963_-ncRNA_intronic
CAediting_1343966chr19_37737981_-ncRNA_intronic
CAediting_1343967chr19_37737985_-ncRNA_intronic
CAediting_1343968chr19_37737992_-ncRNA_intronic
CAediting_1343969chr19_37738012_-ncRNA_intronic
CAediting_1343970chr19_37738013_-ncRNA_intronic
CAediting_1343971chr19_37738027_-ncRNA_intronic
CAediting_1343972chr19_37738031_-ncRNA_intronic
CAediting_1343973chr19_37738044_-ncRNA_intronic
CAediting_1343974chr19_37738054_-ncRNA_intronic
CAediting_1343975chr19_37738080_-ncRNA_intronic
CAediting_1343976chr19_37738090_-ncRNA_intronic
CAediting_1343977chr19_37738093_-ncRNA_intronic
CAediting_1343978chr19_37738094_-ncRNA_intronic
CAediting_1343979chr19_37738095_-ncRNA_intronic
CAediting_1343980chr19_37738096_-ncRNA_intronic
CAediting_1343981chr19_37738099_-ncRNA_intronic
CAediting_1343982chr19_37738110_-ncRNA_intronic
CAediting_1343983chr19_37738111_-ncRNA_intronic
CAediting_1343984chr19_37738118_-ncRNA_intronic
CAediting_1343985chr19_37738120_-ncRNA_intronic
CAediting_1343986chr19_37738137_-ncRNA_intronic
CAediting_1343987chr19_37738144_-ncRNA_intronic
CAediting_1343988chr19_37738149_-ncRNA_intronic
CAediting_1343989chr19_37738152_-ncRNA_intronic
CAediting_1343990chr19_37738165_-ncRNA_intronic
CAediting_1343991chr19_37738166_-ncRNA_intronic
CAediting_1343992chr19_37738179_-ncRNA_intronic
CAediting_1343993chr19_37738182_-ncRNA_intronic
CAediting_1343994chr19_37738188_-ncRNA_intronic
CAediting_1343995chr19_37753004_-intronic
CAediting_1343996chr19_37755067_-intronic
CAediting_1343997chr19_37755102_-intronic
CAediting_1343998chr19_37755108_-intronic
CAediting_1343999chr19_37755140_-intronic
CAediting_1344000chr19_37755241_-UTR3
CAediting_1344001chr19_37758500_-exonic
CAediting_1344002chr19_37758548_-exonic
CAediting_1344003chr19_37763820_-intronic
CAediting_1344004chr19_37764485_-intronic
CAediting_1344005chr19_37764497_-intronic
CAediting_1344006chr19_37764498_-intronic
CAediting_1344007chr19_37764586_-intronic
CAediting_1344008chr19_37764639_-intronic
CAediting_1344009chr19_37765003_-intronic
CAediting_1344010chr19_37765008_-intronic
CAediting_1344011chr19_37765044_-intronic
CAediting_1344012chr19_37765050_-intronic
CAediting_1344013chr19_37765066_-intronic
CAediting_1344014chr19_37765070_-intronic
CAediting_1344015chr19_37765083_-intronic
CAediting_1344016chr19_37765085_-intronic
CAediting_1344017chr19_37765088_-intronic
CAediting_1344018chr19_37765788_-intronic
CAediting_1344019chr19_37765793_-intronic
CAediting_1344020chr19_37765794_-intronic
CAediting_1344021chr19_37765885_-intronic
CAediting_1344022chr19_37769483_-intronic
CAediting_1344023chr19_37769493_-intronic
CAediting_1344024chr19_37770562_-exonic
CAediting_1344025chr19_37772669_-ncRNA_intronic
CAediting_1344026chr19_37774206_-ncRNA_intronic
CAediting_1344027chr19_37774392_-ncRNA_intronic
CAediting_1344028chr19_37775052_-ncRNA_intronic
CAediting_1344029chr19_37775074_-ncRNA_intronic
CAediting_1344030chr19_37775077_-ncRNA_intronic
CAediting_1344031chr19_37775079_-ncRNA_intronic
CAediting_1344032chr19_37775109_-ncRNA_intronic
CAediting_1344033chr19_37775113_-ncRNA_intronic
CAediting_1344034chr19_37775114_-ncRNA_intronic
CAediting_1344035chr19_37775119_-ncRNA_intronic
CAediting_1344036chr19_37775128_-ncRNA_intronic
CAediting_1344037chr19_37775132_-ncRNA_intronic
CAediting_1344038chr19_37775138_-ncRNA_intronic
CAediting_1344039chr19_37775141_-ncRNA_intronic
CAediting_1344040chr19_37775145_-ncRNA_intronic
CAediting_1344041chr19_37775161_-ncRNA_intronic
CAediting_1344042chr19_37775163_-ncRNA_intronic
CAediting_1344043chr19_37775173_-ncRNA_intronic
CAediting_1344044chr19_37775177_-ncRNA_intronic
CAediting_1344045chr19_37777286_-ncRNA_intronic
CAediting_1344046chr19_37778452_-ncRNA_intronic
CAediting_1344047chr19_37778461_-ncRNA_intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_1343893chr19_37735948_-SINEAluAluJr
CAediting_1343894chr19_37735956_-SINEAluAluJr
CAediting_1343895chr19_37735962_-SINEAluAluJr
CAediting_1343896chr19_37735977_-SINEAluAluJr
CAediting_1343897chr19_37735978_-SINEAluAluJr
CAediting_1343898chr19_37735979_-SINEAluAluJr
CAediting_1343899chr19_37735989_-SINEAluAluJr
CAediting_1343900chr19_37735999_-SINEAluAluJr
CAediting_1343901chr19_37736008_-SINEAluAluJr
CAediting_1343902chr19_37736009_-SINEAluAluJr
CAediting_1343903chr19_37736042_-SINEAluAluJr
CAediting_1343904chr19_37736043_-SINEAluAluJr
CAediting_1343905chr19_37736063_-SINEAluAluJr
CAediting_1343906chr19_37736069_-SINEAluAluJr
CAediting_1343907chr19_37736071_-SINEAluAluJr
CAediting_1343908chr19_37736077_-SINEAluAluJr
CAediting_1343909chr19_37736081_-SINEAluAluJr
CAediting_1343910chr19_37736087_-SINEAluAluJr
CAediting_1343911chr19_37736093_-SINEAluAluJr
CAediting_1343912chr19_37736098_-SINEAluAluJr
CAediting_1343913chr19_37736110_-SINEAluAluJr
CAediting_1343914chr19_37736111_-SINEAluAluJr
CAediting_1343915chr19_37736124_-SINEAluAluJr
CAediting_1343916chr19_37736131_-SINEAluAluJr
CAediting_1343917chr19_37736133_-SINEAluAluJr
CAediting_1343918chr19_37736136_-SINEAluAluJr
CAediting_1343919chr19_37736141_-SINEAluAluJr
CAediting_1343920chr19_37736143_-SINEAluAluJr
CAediting_1343921chr19_37736146_-SINEAluAluJr
CAediting_1343922chr19_37736160_-SINEAluAluJr
CAediting_1343923chr19_37736167_-SINEAluAluJr
CAediting_1343924chr19_37736171_-SINEAluAluJr
CAediting_1343925chr19_37736192_-SINEAluAluJr
CAediting_1343926chr19_37737151_-SINEAluAluSc8
CAediting_1343927chr19_37737152_-SINEAluAluSc8
CAediting_1343928chr19_37737153_-SINEAluAluSc8
CAediting_1343929chr19_37737154_-SINEAluAluSc8
CAediting_1343930chr19_37737173_-SINEAluAluSc8
CAediting_1343931chr19_37737176_-SINEAluAluSc8
CAediting_1343932chr19_37737185_-SINEAluAluSc8
CAediting_1343933chr19_37737203_-SINEAluAluSc8
CAediting_1343934chr19_37737210_-SINEAluAluSc8
CAediting_1343935chr19_37737214_-SINEAluAluSc8
CAediting_1343936chr19_37737227_-SINEAluAluSc8
CAediting_1343937chr19_37737234_-SINEAluAluSc8
CAediting_1343938chr19_37737235_-SINEAluAluSc8
CAediting_1343939chr19_37737243_-SINEAluAluSc8
CAediting_1343940chr19_37737259_-SINEAluAluSc8
CAediting_1343941chr19_37737270_-SINEAluAluSc8
CAediting_1343942chr19_37737276_-SINEAluAluSc8
CAediting_1343943chr19_37737284_-SINEAluAluSc8
CAediting_1343944chr19_37737298_-SINEAluAluSc8
CAediting_1343945chr19_37737330_-SINEAluAluSc8
CAediting_1343946chr19_37737331_-SINEAluAluSc8
CAediting_1343947chr19_37737339_-SINEAluAluSc8
CAediting_1343948chr19_37737343_-SINEAluAluSc8
CAediting_1343949chr19_37737349_-SINEAluAluSc8
CAediting_1343950chr19_37737353_-SINEAluAluSc8
CAediting_1343951chr19_37737492_-SINEAluAluJo
CAediting_1343952chr19_37737506_-SINEAluAluJo
CAediting_1343953chr19_37737513_-SINEAluAluJo
CAediting_1343954chr19_37737535_-SINEAluAluJo
CAediting_1343955chr19_37737537_-SINEAluAluJo
CAediting_1343956chr19_37737553_-SINEAluAluJo
CAediting_1343957chr19_37737569_-SINEAluAluJo
CAediting_1343958chr19_37737571_-SINEAluAluJo
CAediting_1343959chr19_37737573_-SINEAluAluJo
CAediting_1343960chr19_37737930_-SINEAluAluY
CAediting_1343961chr19_37737931_-SINEAluAluY
CAediting_1343962chr19_37737951_-SINEAluAluY
CAediting_1343963chr19_37737953_-SINEAluAluY
CAediting_1343964chr19_37737954_-SINEAluAluY
CAediting_1343965chr19_37737963_-SINEAluAluY
CAediting_1343966chr19_37737981_-SINEAluAluY
CAediting_1343967chr19_37737985_-SINEAluAluY
CAediting_1343968chr19_37737992_-SINEAluAluY
CAediting_1343969chr19_37738012_-SINEAluAluY
CAediting_1343970chr19_37738013_-SINEAluAluY
CAediting_1343971chr19_37738027_-SINEAluAluY
CAediting_1343972chr19_37738031_-SINEAluAluY
CAediting_1343973chr19_37738044_-SINEAluAluY
CAediting_1343974chr19_37738054_-SINEAluAluY
CAediting_1343975chr19_37738080_-SINEAluAluY
CAediting_1343976chr19_37738090_-SINEAluAluY
CAediting_1343977chr19_37738093_-SINEAluAluY
CAediting_1343978chr19_37738094_-SINEAluAluY
CAediting_1343979chr19_37738095_-SINEAluAluY
CAediting_1343980chr19_37738096_-SINEAluAluY
CAediting_1343981chr19_37738099_-SINEAluAluY
CAediting_1343982chr19_37738110_-SINEAluAluY
CAediting_1343983chr19_37738111_-SINEAluAluY
CAediting_1343984chr19_37738118_-SINEAluAluY
CAediting_1343985chr19_37738120_-SINEAluAluY
CAediting_1343986chr19_37738137_-SINEAluAluY
CAediting_1343987chr19_37738144_-SINEAluAluY
CAediting_1343988chr19_37738149_-SINEAluAluY
CAediting_1343989chr19_37738152_-SINEAluAluY
CAediting_1343990chr19_37738165_-SINEAluAluY
CAediting_1343991chr19_37738166_-SINEAluAluY
CAediting_1343992chr19_37738179_-SINEAluAluY
CAediting_1343993chr19_37738182_-SINEAluAluY
CAediting_1343994chr19_37738188_-SINEAluAluY
CAediting_1343995chr19_37753004_-SINEAluFLAM_C
CAediting_1343996chr19_37755067_-SINEAluAluY
CAediting_1343997chr19_37755102_-SINEAluAluY
CAediting_1343998chr19_37755108_-SINEAluAluY
CAediting_1343999chr19_37755140_-SINEAluAluY
CAediting_1344000chr19_37755241_-SINEAluAluY
CAediting_1344001chr19_37758500_-SINEAluAluSx
CAediting_1344002chr19_37758548_-SINEAluAluSx
CAediting_1344003chr19_37763820_-SINEAluAluSp
CAediting_1344004chr19_37764485_-SINEAluAluSc
CAediting_1344005chr19_37764497_-SINEAluAluSc
CAediting_1344006chr19_37764498_-SINEAluAluSc
CAediting_1344007chr19_37764586_-SINEAluAluSc
CAediting_1344008chr19_37764639_-SINEAluAluYk4
CAediting_1344009chr19_37765003_-SINEAluAluSq2
CAediting_1344010chr19_37765008_-SINEAluAluSq2
CAediting_1344011chr19_37765044_-SINEAluAluSq2
CAediting_1344012chr19_37765050_-SINEAluAluSq2
CAediting_1344013chr19_37765066_-SINEAluAluSq2
CAediting_1344014chr19_37765070_-SINEAluAluSq2
CAediting_1344015chr19_37765083_-SINEAluAluSq2
CAediting_1344016chr19_37765085_-SINEAluAluSq2
CAediting_1344017chr19_37765088_-SINEAluAluSq2
CAediting_1344018chr19_37765788_-SINEAluAluSq2
CAediting_1344019chr19_37765793_-SINEAluAluSq2
CAediting_1344020chr19_37765794_-SINEAluAluSq2
CAediting_1344021chr19_37765885_-SINEAluAluSq2
CAediting_1344022chr19_37769483_-SINEAluAluSg
CAediting_1344023chr19_37769493_-SINEAluAluSg
CAediting_1344024chr19_37770562_-SINEAluAluJo
CAediting_1344025chr19_37772669_-SINEAluAluJb
CAediting_1344026chr19_37774206_-SINEAluAluSx
CAediting_1344027chr19_37774392_-SINEAluAluSx
CAediting_1344028chr19_37775052_-SINEAluAluJo
CAediting_1344029chr19_37775074_-SINEAluAluJo
CAediting_1344030chr19_37775077_-SINEAluAluJo
CAediting_1344031chr19_37775079_-SINEAluAluJo
CAediting_1344032chr19_37775109_-SINEAluAluJo
CAediting_1344033chr19_37775113_-SINEAluAluJo
CAediting_1344034chr19_37775114_-SINEAluAluJo
CAediting_1344035chr19_37775119_-SINEAluAluJo
CAediting_1344036chr19_37775128_-SINEAluAluJo
CAediting_1344037chr19_37775132_-SINEAluAluJo
CAediting_1344038chr19_37775138_-SINEAluAluJo
CAediting_1344039chr19_37775141_-SINEAluAluJo
CAediting_1344040chr19_37775145_-SINEAluAluJo
CAediting_1344041chr19_37775161_-SINEAluAluJo
CAediting_1344042chr19_37775163_-SINEAluAluJo
CAediting_1344043chr19_37775173_-SINEAluAluJo
CAediting_1344044chr19_37775177_-SINEAluAluJo
CAediting_1344045chr19_37777286_-SINEAluAluSz
CAediting_1344046chr19_37778452_-SINEAluAluSz
CAediting_1344047chr19_37778461_-SINEAluAluSz

Top

RNA A-to-I editing events in the alternative splicing sites for ZNF573

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000189144.12.ZNF573.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000189144.12.ZNF573.

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for ZNF573

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.
LAML.CAediting_1343917.ENSG00000189144.ZNF573.png
Soverview

Top

Protein coding region RNA A-to-I editings for ZNF573

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


Top

The effects of the RNA editing to the miRNA binding sites for ZNF573

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1344000chr19_37755241_-ENSG00000189144.12ENST00000591516hsa-miR-513a-5p37755240377552467mer-m83775523937755256144.00-16.68
CAediting_1344000chr19_37755241_-ENSG00000189144.12ENST00000591516hsa-miR-513a-5p37755240377552467mer-m83775523937755256144.00-16.68
CAediting_1344000chr19_37755241_-ENSG00000189144.12ENST00000591516hsa-miR-63837755235377552417mer-1a3775523537755259159.00-35.56
CAediting_1344001chr19_37758500_-ENSG00000189144.12ENST00000589632hsa-miR-132-5p37758499377585057mer-m83775849837758520150.00-19.99
CAediting_1344002chr19_37758548_-ENSG00000189144.12ENST00000589632hsa-miR-453737758543377585508mer-1a3775854337758565151.00-25.55

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1344002chr19_37758548_-ENSG00000189144.12ENST00000589632hsa-miR-3160-3p37758543377585508mer-1a3775854337758564150-18.42
CAediting_1344002chr19_37758548_-ENSG00000189144.12ENST00000589632hsa-miR-3160-3p37758543377585508mer-1a3775854337758564150-18.42
CAediting_1344001chr19_37758500_-ENSG00000189144.12ENST00000589632hsa-miR-6884-5p37758495377585017mer-m83775849437758516152-22.51
CAediting_1344002chr19_37758548_-ENSG00000189144.12ENST00000589632hsa-miR-7160-5p37758546377585516mer3775854537758564148-27.42
CAediting_1344001chr19_37758500_-ENSG00000189144.12ENST00000589632hsa-miR-797437758497377585037mer-m83775849637758519140-18.58
CAediting_1344000chr19_37755241_-ENSG00000189144.12ENST00000591516hsa-miR-10399-5p37755239377552457mer-m83775523837755259144-11.2
CAediting_1344000chr19_37755241_-ENSG00000189144.12ENST00000591516hsa-miR-6504-3p37755239377552457mer-m83775523837755259148-14.35
CAediting_1344000chr19_37755241_-ENSG00000189144.12ENST00000591516hsa-miR-7151-3p37755240377552478mer-1a3775524037755260144-16.51

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1229415chr17_67471547_+ENSG00000189144.12ENST00000589632hsa-miR-548aa37738402377384098mer-1a3773840237738426150-10.23
CAediting_228905chr2_188297554_+ENSG00000189144.12ENST00000589632hsa-miR-561-3p37739286377392927mer-m83773928537739306146-10.72
CAediting_228905chr2_188297554_+ENSG00000189144.12ENST00000589632hsa-miR-561-3p37740089377400968mer-1a3774008937740110144-12.08
CAediting_1229415chr17_67471547_+ENSG00000189144.12ENST00000339503hsa-miR-548aa37738402377384098mer-1a3773840237738426150-10.23
CAediting_1229415chr17_67471547_+ENSG00000189144.12ENST00000586155hsa-miR-548aa37738402377384098mer-1a3773840237738426150-10.23
CAediting_228905chr2_188297554_+ENSG00000189144.12ENST00000586155hsa-miR-561-3p37739286377392927mer-m83773928537739306146-10.72
CAediting_228905chr2_188297554_+ENSG00000189144.12ENST00000586155hsa-miR-561-3p37740089377400968mer-1a3774008937740110144-12.08
CAediting_1229415chr17_67471547_+ENSG00000189144.12ENST00000536220hsa-miR-548aa37738402377384098mer-1a3773840237738426150-10.23
CAediting_1229415chr17_67471547_+ENSG00000189144.12ENST00000392138hsa-miR-548aa37738402377384098mer-1a3773840237738426150-10.23
CAediting_228905chr2_188297554_+ENSG00000189144.12ENST00000489148hsa-miR-561-3p37740089377400968mer-1a3774008937740110144-12.08
CAediting_228905chr2_188297554_+ENSG00000189144.12ENST00000585724hsa-miR-561-3p37740089377400968mer-1a3774008937740110144-12.08
CAediting_228905chr2_188297554_+ENSG00000189144.12ENST00000591516hsa-miR-561-3p37740089377400968mer-1a3774008937740110144-12.08

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_228905chr2_188297554_+ENSG00000189144.12ENST00000589632hsa-miR-561-3p37739082377390887mer-m83773908137739102146-9.19
CAediting_228905chr2_188297554_+ENSG00000189144.12ENST00000589632hsa-miR-561-3p37739334377393407mer-m83773933337739356146-9.08
CAediting_228905chr2_188297554_+ENSG00000189144.12ENST00000586155hsa-miR-561-3p37739082377390887mer-m83773908137739102146-9.19
CAediting_228905chr2_188297554_+ENSG00000189144.12ENST00000586155hsa-miR-561-3p37739334377393407mer-m83773933337739356146-9.08

check button Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for ZNF573

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

Top

Relation with ADAR for ZNF573

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
BRCACAediting_1343908chr19_37736077_-0.006255294285613230.271662589719969....
STADCAediting_1343908chr19_37736077_-0.003571536572820790.297665796559934....
KIRCCAediting_1343908chr19_37736077_-0.04516954041688130.255352687431368....
BRCACAediting_1343957chr19_37737569_-0.04715004406252310.174439220656719....

Top

Relation with cancer stages for ZNF573

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.
BRCApathologic_stageCAediting_1343917chr19_37736133_-0.01317892686376160.26635613348198

Top

Relation with survival for ZNF573

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

Top

RelatedDrugs for ZNF573

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

Top

RelatedDiseases for ZNF573

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource