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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: SPNS2 (CAeditome ID:124976)

Gene summary for SPNS2

check button Gene summary
Gene informationGene symbol

SPNS2

Gene ID

124976

Gene namesphingolipid transporter 2
SynonymsDFNB115|SLC62A2|SLC63A2
Cytomap

17p13.2

Type of geneprotein-coding
Descriptionprotein spinster homolog 2SPNS sphingolipid transporter 2spinster homolog 2
Modification date20210518
UniProtAcc

Q8IVW8

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
SPNS2

GO:0046624

Protein spinster homolog 2

21084291

SPNS2

GO:0006869

Protein spinster homolog 2

21084291


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RNA A-to-I events for SPNS2

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000183018.7
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_1156945(4516132, +), CAediting_1156946(4524577, +), CAediting_1156947(4526347, +), CAediting_1156948(4526348, +), CAediting_1156949(4526407, +), CAediting_1156950(4526426, +), CAediting_1156951(4526427, +), CAediting_1156952(4526482, +), CAediting_1156953(4526483, +), CAediting_1156954(4526492, +), CAediting_1156955(4526515, +), CAediting_1156956(4526523, +), CAediting_1156957(4526531, +), CAediting_1156958(4526560, +), CAediting_1156959(4528084, +), CAediting_1156960(4528087, +), CAediting_1156961(4528097, +), CAediting_1156962(4528102, +), CAediting_1156963(4528103, +), CAediting_1156964(4528122, +), CAediting_1156965(4528123, +), CAediting_1156966(4528152, +), CAediting_1156967(4528164, +), CAediting_1156968(4528184, +), CAediting_1156969(4528197, +), CAediting_1156970(4528206, +), CAediting_1156971(4528208, +), CAediting_1156972(4528220, +), CAediting_1156973(4528229, +), CAediting_1156974(4528232, +), CAediting_1156975(4528237, +), CAediting_1156976(4528257, +), CAediting_1156977(4528267, +), CAediting_1156978(4528275, +), CAediting_1156979(4528285, +), CAediting_1156980(4528294, +), CAediting_1156981(4528306, +), CAediting_1156982(4528486, +), CAediting_1156983(4528502, +), CAediting_1156984(4528518, +), CAediting_1156985(4528526, +), CAediting_1156986(4528527, +), CAediting_1156987(4528570, +), CAediting_1156988(4528576, +), CAediting_1156989(4528577, +), CAediting_1156990(4528606, +), CAediting_1156991(4528616, +), CAediting_1156992(4528618, +), CAediting_1156993(4528638, +), CAediting_1156994(4528642, +), CAediting_1156995(4528657, +), CAediting_1156996(4528660, +), CAediting_1156997(4528662, +), CAediting_1156998(4528664, +), CAediting_1156999(4528665, +), CAediting_1157000(4528720, +), CAediting_1157001(4528730, +), CAediting_1157002(4528774, +), CAediting_1157003(4528797, +), CAediting_1157004(4528823, +), CAediting_1157005(4529000, +), CAediting_1157006(4529011, +), CAediting_1157007(4529017, +), CAediting_1157008(4529031, +), CAediting_1157009(4529036, +), CAediting_1157010(4529037, +), CAediting_1157011(4529040, +), CAediting_1157012(4529041, +), CAediting_1157013(4529075, +), CAediting_1157014(4529077, +), CAediting_1157015(4529101, +), CAediting_1157016(4529102, +), CAediting_1157017(4529119, +), CAediting_1157018(4529121, +), CAediting_1157019(4529133, +), CAediting_1157020(4529186, +), CAediting_1157021(4529195, +), CAediting_1157022(4529196, +), CAediting_1157023(4529208, +), CAediting_1157024(4529210, +), CAediting_1157025(4529217, +), CAediting_1157026(4529253, +), CAediting_1157027(4529263, +), CAediting_1157028(4529265, +), CAediting_1157029(4529267, +), CAediting_1157030(4529270, +), CAediting_1157031(4529277, +), CAediting_1157032(4529285, +), CAediting_1157033(4529314, +), CAediting_1157034(4529318, +), CAediting_1157035(4529332, +), CAediting_1157036(4529340, +), CAediting_1157037(4529341, +), CAediting_1157038(4529342, +), CAediting_1157039(4529354, +), CAediting_1157040(4529356, +), CAediting_1157041(4529360, +), CAediting_1157042(4529363, +), CAediting_1157043(4529376, +), CAediting_1157044(4529427, +), CAediting_1157045(4529435, +), CAediting_1157046(4529436, +), CAediting_1157047(4529441, +), CAediting_1157048(4529444, +), CAediting_1157049(4529458, +), CAediting_1157050(4529466, +), CAediting_1157051(4529471, +), CAediting_1157052(4529472, +), CAediting_1157053(4529486, +), CAediting_1157054(4529487, +), CAediting_1157055(4529494, +), CAediting_1157056(4529495, +), CAediting_1157057(4529496, +), CAediting_1157058(4529497, +), CAediting_1157059(4529508, +), CAediting_1157060(4529511, +), CAediting_1157061(4529513, +), CAediting_1157062(4529514, +), CAediting_1157063(4529520, +), CAediting_1157064(4529521, +), CAediting_1157065(4529522, +), CAediting_1157066(4529525, +), CAediting_1157067(4529549, +), CAediting_1157068(4529551, +), CAediting_1157069(4529552, +), CAediting_1157070(4529568, +), CAediting_1157071(4529574, +), CAediting_1157072(4529578, +), CAediting_1157073(4529581, +), CAediting_1157074(4529583, +), CAediting_1157075(4529584, +), CAediting_1157076(4529592, +), CAediting_1157077(4529604, +), CAediting_1157078(4529613, +), CAediting_1157079(4529617, +), CAediting_1157080(4529621, +), CAediting_1157081(4529623, +), CAediting_1157082(4529636, +), CAediting_1157083(4529647, +), CAediting_1157084(4529658, +), CAediting_1157085(4529659, +), CAediting_1157086(4529666, +), CAediting_1157087(4529678, +), CAediting_1157088(4529679, +), CAediting_1157089(4534801, +),

Top

RNA editing positional annotations for SPNS2 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_1156945chr17_4516132_+intronic
CAediting_1156946chr17_4524577_+intronic
CAediting_1156947chr17_4526347_+intronic
CAediting_1156948chr17_4526348_+intronic
CAediting_1156949chr17_4526407_+intronic
CAediting_1156950chr17_4526426_+intronic
CAediting_1156951chr17_4526427_+intronic
CAediting_1156952chr17_4526482_+intronic
CAediting_1156953chr17_4526483_+intronic
CAediting_1156954chr17_4526492_+intronic
CAediting_1156955chr17_4526515_+intronic
CAediting_1156956chr17_4526523_+intronic
CAediting_1156957chr17_4526531_+intronic
CAediting_1156958chr17_4526560_+intronic
CAediting_1156959chr17_4528084_+intronic
CAediting_1156960chr17_4528087_+intronic
CAediting_1156961chr17_4528097_+intronic
CAediting_1156962chr17_4528102_+intronic
CAediting_1156963chr17_4528103_+intronic
CAediting_1156964chr17_4528122_+intronic
CAediting_1156965chr17_4528123_+intronic
CAediting_1156966chr17_4528152_+intronic
CAediting_1156967chr17_4528164_+intronic
CAediting_1156968chr17_4528184_+intronic
CAediting_1156969chr17_4528197_+intronic
CAediting_1156970chr17_4528206_+intronic
CAediting_1156971chr17_4528208_+intronic
CAediting_1156972chr17_4528220_+intronic
CAediting_1156973chr17_4528229_+intronic
CAediting_1156974chr17_4528232_+intronic
CAediting_1156975chr17_4528237_+intronic
CAediting_1156976chr17_4528257_+intronic
CAediting_1156977chr17_4528267_+intronic
CAediting_1156978chr17_4528275_+intronic
CAediting_1156979chr17_4528285_+intronic
CAediting_1156980chr17_4528294_+intronic
CAediting_1156981chr17_4528306_+intronic
CAediting_1156982chr17_4528486_+intronic
CAediting_1156983chr17_4528502_+intronic
CAediting_1156984chr17_4528518_+intronic
CAediting_1156985chr17_4528526_+intronic
CAediting_1156986chr17_4528527_+intronic
CAediting_1156987chr17_4528570_+intronic
CAediting_1156988chr17_4528576_+intronic
CAediting_1156989chr17_4528577_+intronic
CAediting_1156990chr17_4528606_+intronic
CAediting_1156991chr17_4528616_+intronic
CAediting_1156992chr17_4528618_+intronic
CAediting_1156993chr17_4528638_+intronic
CAediting_1156994chr17_4528642_+intronic
CAediting_1156995chr17_4528657_+intronic
CAediting_1156996chr17_4528660_+intronic
CAediting_1156997chr17_4528662_+intronic
CAediting_1156998chr17_4528664_+intronic
CAediting_1156999chr17_4528665_+intronic
CAediting_1157000chr17_4528720_+intronic
CAediting_1157001chr17_4528730_+intronic
CAediting_1157002chr17_4528774_+intronic
CAediting_1157003chr17_4528797_+intronic
CAediting_1157004chr17_4528823_+intronic
CAediting_1157005chr17_4529000_+intronic
CAediting_1157006chr17_4529011_+intronic
CAediting_1157007chr17_4529017_+intronic
CAediting_1157008chr17_4529031_+intronic
CAediting_1157009chr17_4529036_+intronic
CAediting_1157010chr17_4529037_+intronic
CAediting_1157011chr17_4529040_+intronic
CAediting_1157012chr17_4529041_+intronic
CAediting_1157013chr17_4529075_+intronic
CAediting_1157014chr17_4529077_+intronic
CAediting_1157015chr17_4529101_+intronic
CAediting_1157016chr17_4529102_+intronic
CAediting_1157017chr17_4529119_+intronic
CAediting_1157018chr17_4529121_+intronic
CAediting_1157019chr17_4529133_+intronic
CAediting_1157020chr17_4529186_+intronic
CAediting_1157021chr17_4529195_+intronic
CAediting_1157022chr17_4529196_+intronic
CAediting_1157023chr17_4529208_+intronic
CAediting_1157024chr17_4529210_+intronic
CAediting_1157025chr17_4529217_+intronic
CAediting_1157026chr17_4529253_+intronic
CAediting_1157027chr17_4529263_+intronic
CAediting_1157028chr17_4529265_+intronic
CAediting_1157029chr17_4529267_+intronic
CAediting_1157030chr17_4529270_+intronic
CAediting_1157031chr17_4529277_+intronic
CAediting_1157032chr17_4529285_+intronic
CAediting_1157033chr17_4529314_+intronic
CAediting_1157034chr17_4529318_+intronic
CAediting_1157035chr17_4529332_+intronic
CAediting_1157036chr17_4529340_+intronic
CAediting_1157037chr17_4529341_+intronic
CAediting_1157038chr17_4529342_+intronic
CAediting_1157039chr17_4529354_+intronic
CAediting_1157040chr17_4529356_+intronic
CAediting_1157041chr17_4529360_+intronic
CAediting_1157042chr17_4529363_+intronic
CAediting_1157043chr17_4529376_+intronic
CAediting_1157044chr17_4529427_+intronic
CAediting_1157045chr17_4529435_+intronic
CAediting_1157046chr17_4529436_+intronic
CAediting_1157047chr17_4529441_+intronic
CAediting_1157048chr17_4529444_+intronic
CAediting_1157049chr17_4529458_+intronic
CAediting_1157050chr17_4529466_+intronic
CAediting_1157051chr17_4529471_+intronic
CAediting_1157052chr17_4529472_+intronic
CAediting_1157053chr17_4529486_+intronic
CAediting_1157054chr17_4529487_+intronic
CAediting_1157055chr17_4529494_+intronic
CAediting_1157056chr17_4529495_+intronic
CAediting_1157057chr17_4529496_+intronic
CAediting_1157058chr17_4529497_+intronic
CAediting_1157059chr17_4529508_+intronic
CAediting_1157060chr17_4529511_+intronic
CAediting_1157061chr17_4529513_+intronic
CAediting_1157062chr17_4529514_+intronic
CAediting_1157063chr17_4529520_+intronic
CAediting_1157064chr17_4529521_+intronic
CAediting_1157065chr17_4529522_+intronic
CAediting_1157066chr17_4529525_+intronic
CAediting_1157067chr17_4529549_+intronic
CAediting_1157068chr17_4529551_+intronic
CAediting_1157069chr17_4529552_+intronic
CAediting_1157070chr17_4529568_+intronic
CAediting_1157071chr17_4529574_+intronic
CAediting_1157072chr17_4529578_+intronic
CAediting_1157073chr17_4529581_+intronic
CAediting_1157074chr17_4529583_+intronic
CAediting_1157075chr17_4529584_+intronic
CAediting_1157076chr17_4529592_+intronic
CAediting_1157077chr17_4529604_+intronic
CAediting_1157078chr17_4529613_+intronic
CAediting_1157079chr17_4529617_+intronic
CAediting_1157080chr17_4529621_+intronic
CAediting_1157081chr17_4529623_+intronic
CAediting_1157082chr17_4529636_+intronic
CAediting_1157083chr17_4529647_+intronic
CAediting_1157084chr17_4529658_+intronic
CAediting_1157085chr17_4529659_+intronic
CAediting_1157086chr17_4529666_+intronic
CAediting_1157087chr17_4529678_+intronic
CAediting_1157088chr17_4529679_+intronic
CAediting_1157089chr17_4534801_+ncRNA_intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_1156945chr17_4516132_+SINEAluAluSx1
CAediting_1156946chr17_4524577_+SINEAluAluSz6
CAediting_1156947chr17_4526347_+SINEAluAluSq2
CAediting_1156948chr17_4526348_+SINEAluAluSq2
CAediting_1156949chr17_4526407_+SINEAluAluSq2
CAediting_1156950chr17_4526426_+SINEAluAluSq2
CAediting_1156951chr17_4526427_+SINEAluAluSq2
CAediting_1156952chr17_4526482_+SINEAluAluSq2
CAediting_1156953chr17_4526483_+SINEAluAluSq2
CAediting_1156954chr17_4526492_+SINEAluAluSq2
CAediting_1156955chr17_4526515_+SINEAluAluSq2
CAediting_1156956chr17_4526523_+SINEAluAluSq2
CAediting_1156957chr17_4526531_+SINEAluAluSq2
CAediting_1156958chr17_4526560_+SINEAluAluSq2
CAediting_1156959chr17_4528084_+SINEAluAluSq2
CAediting_1156960chr17_4528087_+SINEAluAluSq2
CAediting_1156961chr17_4528097_+SINEAluAluSq2
CAediting_1156962chr17_4528102_+SINEAluAluSq2
CAediting_1156963chr17_4528103_+SINEAluAluSq2
CAediting_1156964chr17_4528122_+SINEAluAluSq2
CAediting_1156965chr17_4528123_+SINEAluAluSq2
CAediting_1156966chr17_4528152_+SINEAluAluSq2
CAediting_1156967chr17_4528164_+SINEAluAluSq2
CAediting_1156968chr17_4528184_+SINEAluAluSq2
CAediting_1156969chr17_4528197_+SINEAluAluSq2
CAediting_1156970chr17_4528206_+SINEAluAluSq2
CAediting_1156971chr17_4528208_+SINEAluAluSq2
CAediting_1156972chr17_4528220_+SINEAluAluSq2
CAediting_1156973chr17_4528229_+SINEAluAluSq2
CAediting_1156974chr17_4528232_+SINEAluAluSq2
CAediting_1156975chr17_4528237_+SINEAluAluSq2
CAediting_1156976chr17_4528257_+SINEAluAluSq2
CAediting_1156977chr17_4528267_+SINEAluAluSq2
CAediting_1156978chr17_4528275_+SINEAluAluSq2
CAediting_1156979chr17_4528285_+SINEAluAluSq2
CAediting_1156980chr17_4528294_+SINEAluAluSq2
CAediting_1156981chr17_4528306_+SINEAluAluSq2
CAediting_1156982chr17_4528486_+SINEAluAluSx1
CAediting_1156983chr17_4528502_+SINEAluAluSx1
CAediting_1156984chr17_4528518_+SINEAluAluSx1
CAediting_1156985chr17_4528526_+SINEAluAluSx1
CAediting_1156986chr17_4528527_+SINEAluAluSx1
CAediting_1156987chr17_4528570_+SINEAluAluSx1
CAediting_1156988chr17_4528576_+SINEAluAluSx1
CAediting_1156989chr17_4528577_+SINEAluAluSx1
CAediting_1156990chr17_4528606_+SINEAluAluSx1
CAediting_1156991chr17_4528616_+SINEAluAluSx1
CAediting_1156992chr17_4528618_+SINEAluAluSx1
CAediting_1156993chr17_4528638_+SINEAluAluSx1
CAediting_1156994chr17_4528642_+SINEAluAluSx1
CAediting_1156995chr17_4528657_+SINEAluAluSx1
CAediting_1156996chr17_4528660_+SINEAluAluSx1
CAediting_1156997chr17_4528662_+SINEAluAluSx1
CAediting_1156998chr17_4528664_+SINEAluAluSx1
CAediting_1156999chr17_4528665_+SINEAluAluSx1
CAediting_1157000chr17_4528720_+SINEAluAluSx1
CAediting_1157001chr17_4528730_+SINEAluAluSx1
CAediting_1157002chr17_4528774_+SINEAluAluSx1
CAediting_1157003chr17_4528797_+SINEAluAluJr4
CAediting_1157004chr17_4528823_+SINEAluAluJr4
CAediting_1157005chr17_4529000_+SINEAluAluSg7
CAediting_1157006chr17_4529011_+SINEAluAluSg7
CAediting_1157007chr17_4529017_+SINEAluAluSg7
CAediting_1157008chr17_4529031_+SINEAluAluSg7
CAediting_1157009chr17_4529036_+SINEAluAluSg7
CAediting_1157010chr17_4529037_+SINEAluAluSg7
CAediting_1157011chr17_4529040_+SINEAluAluSg7
CAediting_1157012chr17_4529041_+SINEAluAluSg7
CAediting_1157013chr17_4529075_+SINEAluAluSg7
CAediting_1157014chr17_4529077_+SINEAluAluSg7
CAediting_1157015chr17_4529101_+SINEAluAluSg7
CAediting_1157016chr17_4529102_+SINEAluAluSg7
CAediting_1157017chr17_4529119_+SINEAluAluSg7
CAediting_1157018chr17_4529121_+SINEAluAluSg7
CAediting_1157019chr17_4529133_+SINEAluAluSg7
CAediting_1157020chr17_4529186_+SINEAluAluSg7
CAediting_1157021chr17_4529195_+SINEAluAluSg7
CAediting_1157022chr17_4529196_+SINEAluAluSg7
CAediting_1157023chr17_4529208_+SINEAluAluSg7
CAediting_1157024chr17_4529210_+SINEAluAluSg7
CAediting_1157025chr17_4529217_+SINEAluAluSg7
CAediting_1157026chr17_4529253_+SINEAluAluJr4
CAediting_1157027chr17_4529263_+SINEAluAluJr4
CAediting_1157028chr17_4529265_+SINEAluAluJr4
CAediting_1157029chr17_4529267_+SINEAluAluJr4
CAediting_1157030chr17_4529270_+SINEAluAluJr4
CAediting_1157031chr17_4529277_+SINEAluAluJr4
CAediting_1157032chr17_4529285_+SINEAluAluJr4
CAediting_1157033chr17_4529314_+SINEAluAluJr4
CAediting_1157034chr17_4529318_+SINEAluAluJr4
CAediting_1157035chr17_4529332_+SINEAluAluJr4
CAediting_1157036chr17_4529340_+SINEAluAluJr4
CAediting_1157037chr17_4529341_+SINEAluAluJr4
CAediting_1157038chr17_4529342_+SINEAluAluJr4
CAediting_1157039chr17_4529354_+SINEAluAluJr4
CAediting_1157040chr17_4529356_+SINEAluAluJr4
CAediting_1157041chr17_4529360_+SINEAluAluJr4
CAediting_1157042chr17_4529363_+SINEAluAluJr4
CAediting_1157043chr17_4529376_+SINEAluAluJr4
CAediting_1157044chr17_4529427_+SINEAluAluSx1
CAediting_1157045chr17_4529435_+SINEAluAluSx1
CAediting_1157046chr17_4529436_+SINEAluAluSx1
CAediting_1157047chr17_4529441_+SINEAluAluSx1
CAediting_1157048chr17_4529444_+SINEAluAluSx1
CAediting_1157049chr17_4529458_+SINEAluAluSx1
CAediting_1157050chr17_4529466_+SINEAluAluSx1
CAediting_1157051chr17_4529471_+SINEAluAluSx1
CAediting_1157052chr17_4529472_+SINEAluAluSx1
CAediting_1157053chr17_4529486_+SINEAluAluSx1
CAediting_1157054chr17_4529487_+SINEAluAluSx1
CAediting_1157055chr17_4529494_+SINEAluAluSx1
CAediting_1157056chr17_4529495_+SINEAluAluSx1
CAediting_1157057chr17_4529496_+SINEAluAluSx1
CAediting_1157058chr17_4529497_+SINEAluAluSx1
CAediting_1157059chr17_4529508_+SINEAluAluSx1
CAediting_1157060chr17_4529511_+SINEAluAluSx1
CAediting_1157061chr17_4529513_+SINEAluAluSx1
CAediting_1157062chr17_4529514_+SINEAluAluSx1
CAediting_1157063chr17_4529520_+SINEAluAluSx1
CAediting_1157064chr17_4529521_+SINEAluAluSx1
CAediting_1157065chr17_4529522_+SINEAluAluSx1
CAediting_1157066chr17_4529525_+SINEAluAluSx1
CAediting_1157067chr17_4529549_+SINEAluAluSx1
CAediting_1157068chr17_4529551_+SINEAluAluSx1
CAediting_1157069chr17_4529552_+SINEAluAluSx1
CAediting_1157070chr17_4529568_+SINEAluAluSx1
CAediting_1157071chr17_4529574_+SINEAluAluSx1
CAediting_1157072chr17_4529578_+SINEAluAluSx1
CAediting_1157073chr17_4529581_+SINEAluAluSx1
CAediting_1157074chr17_4529583_+SINEAluAluSx1
CAediting_1157075chr17_4529584_+SINEAluAluSx1
CAediting_1157076chr17_4529592_+SINEAluAluSx1
CAediting_1157077chr17_4529604_+SINEAluAluSx1
CAediting_1157078chr17_4529613_+SINEAluAluSx1
CAediting_1157079chr17_4529617_+SINEAluAluSx1
CAediting_1157080chr17_4529621_+SINEAluAluSx1
CAediting_1157081chr17_4529623_+SINEAluAluSx1
CAediting_1157082chr17_4529636_+SINEAluAluSx1
CAediting_1157083chr17_4529647_+SINEAluAluSx1
CAediting_1157084chr17_4529658_+SINEAluAluSx1
CAediting_1157085chr17_4529659_+SINEAluAluSx1
CAediting_1157086chr17_4529666_+SINEAluAluSx1
CAediting_1157087chr17_4529678_+SINEAluAluSx1
CAediting_1157088chr17_4529679_+SINEAluAluSx1

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RNA A-to-I editing events in the alternative splicing sites for SPNS2

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength
ESCAediting_1156976chr17_4528257_+4528256:45282645SS2+0iCAGGTGATC4.28CGGGTGATC1.21

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000183018.7.SPNS2.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000183018.7.SPNS2.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for SPNS2

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.
STAD.CAediting_1157067.ENSG00000183018.SPNS2.png
Soverview

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Protein coding region RNA A-to-I editings for SPNS2

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for SPNS2

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_748296chr10_51299626_+ENSG00000183018.7ENST00000329078hsa-miR-605-3p453779045377967mer-m845377804537797142-15.26
CAediting_1054808chr15_66496985_-ENSG00000183018.7ENST00000329078hsa-miR-4512453885845388647mer-1a45388434538864141-23.07
CAediting_1054808chr15_66496985_-ENSG00000183018.7ENST00000329078hsa-miR-4512453840745384137mer-m845383924538414154-26.74
CAediting_86358chr1_109598906_+ENSG00000183018.7ENST00000329078hsa-miR-197-5p453883345388397mer-m845388164538840151-29.55
CAediting_1399425chr20_1392958_-ENSG00000183018.7ENST00000329078hsa-miR-6869-5p453842845384358mer-1a45384154538435158-24.24

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1054808chr15_66496985_-ENSG00000183018.7ENST00000329078hsa-miR-4512453814545381517mer-m845381304538152147-26.79
CAediting_524911chr7_5495852_-ENSG00000183018.7ENST00000329078hsa-miR-589-3p453811445381218mer-1a45380984538121146-20.8

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for SPNS2

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for SPNS2

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
STADCAediting_1157068chr17_4529551_+0.0103662732561720.276682239951944....

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Relation with cancer stages for SPNS2

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

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Relation with survival for SPNS2

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for SPNS2

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for SPNS2

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource