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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: SLC43A2 (CAeditome ID:124935)

Gene summary for SLC43A2

check button Gene summary
Gene informationGene symbol

SLC43A2

Gene ID

124935

Gene namesolute carrier family 43 member 2
SynonymsLAT4
Cytomap

17p13.3

Type of geneprotein-coding
Descriptionlarge neutral amino acids transporter small subunit 4L-type amino acid transporter 4solute carrier family 43 (amino acid system L transporter), member 2
Modification date20210518
UniProtAcc

Q8N370

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
SLC43A2

GO:0051956

Large neutral amino acids transporter small subunit 4

26305885

SLC43A2

GO:0060358

Large neutral amino acids transporter small subunit 4

26305885


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RNA A-to-I events for SLC43A2

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000167703.13
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_1150746(1569883, -), CAediting_1150747(1569889, -), CAediting_1150748(1569895, -), CAediting_1150749(1569897, -), CAediting_1150750(1569898, -), CAediting_1150751(1569899, -), CAediting_1150752(1569901, -), CAediting_1150753(1569902, -), CAediting_1150754(1569903, -), CAediting_1150755(1569904, -), CAediting_1150756(1569905, -), CAediting_1150757(1569917, -), CAediting_1150758(1569921, -), CAediting_1150759(1569935, -), CAediting_1150760(1569940, -), CAediting_1150761(1569964, -), CAediting_1150762(1569977, -), CAediting_1150763(1569984, -), CAediting_1150764(1569985, -), CAediting_1150765(1569999, -), CAediting_1150766(1570009, -), CAediting_1150767(1570016, -), CAediting_1150768(1570020, -), CAediting_1150769(1570026, -), CAediting_1150770(1570052, -), CAediting_1150771(1570058, -), CAediting_1150772(1570061, -), CAediting_1150773(1570130, -), CAediting_1150774(1570143, -), CAediting_1150775(1570157, -), CAediting_1150776(1570160, -), CAediting_1150777(1570165, -), CAediting_1150778(1570166, -), CAediting_1150779(1570246, -), CAediting_1150780(1570309, -), CAediting_1150781(1570310, -), CAediting_1150782(1570583, -), CAediting_1150783(1570584, -), CAediting_1150784(1570592, -), CAediting_1150785(1570598, -), CAediting_1150786(1570681, -), CAediting_1150787(1570759, -), CAediting_1150788(1570767, -), CAediting_1150789(1572907, -), CAediting_1150790(1572914, -), CAediting_1150791(1572916, -), CAediting_1150792(1572928, -), CAediting_1150793(1572929, -), CAediting_1150794(1572930, -), CAediting_1150795(1572938, -), CAediting_1150796(1572943, -), CAediting_1150797(1572952, -), CAediting_1150798(1572956, -), CAediting_1150799(1572990, -), CAediting_1150800(1573005, -), CAediting_1150801(1573027, -), CAediting_1150802(1573051, -), CAediting_1150803(1573067, -), CAediting_1150804(1573081, -), CAediting_1150805(1573093, -), CAediting_1150806(1573094, -), CAediting_1150807(1573106, -), CAediting_1150808(1573116, -), CAediting_1150809(1573653, -), CAediting_1150810(1573657, -), CAediting_1150811(1573680, -), CAediting_1150812(1573716, -), CAediting_1150813(1573717, -), CAediting_1150814(1573725, -), CAediting_1150815(1573728, -), CAediting_1150816(1573731, -), CAediting_1150817(1573735, -), CAediting_1150818(1573741, -), CAediting_1150819(1573748, -), CAediting_1150820(1573752, -), CAediting_1150821(1573758, -), CAediting_1150822(1573783, -), CAediting_1150823(1573784, -), CAediting_1150824(1573850, -), CAediting_1150825(1573864, -), CAediting_1150826(1573869, -), CAediting_1150827(1573882, -), CAediting_1150828(1573890, -), CAediting_1150829(1573891, -), CAediting_1150830(1576195, -), CAediting_1150831(1578561, -), CAediting_1150832(1578562, -), CAediting_1150833(1578580, -), CAediting_1150834(1578625, -), CAediting_1150835(1578656, -), CAediting_1150836(1578665, -), CAediting_1150837(1578666, -), CAediting_1150838(1578701, -), CAediting_1150839(1578706, -), CAediting_1150840(1578748, -), CAediting_1150841(1578884, -), CAediting_1150842(1579019, -), CAediting_1150843(1579583, -), CAediting_1150844(1579618, -), CAediting_1150845(1579682, -), CAediting_1150846(1579737, -), CAediting_1150847(1579742, -), CAediting_1150848(1579755, -), CAediting_1150849(1579824, -), CAediting_1150850(1580003, -), CAediting_1150851(1580038, -), CAediting_1150852(1580098, -), CAediting_1150853(1580104, -), CAediting_1150854(1580109, -), CAediting_1150855(1580191, -), CAediting_1150856(1580580, -), CAediting_1150857(1580597, -), CAediting_1150858(1580624, -), CAediting_1150859(1580629, -), CAediting_1150860(1580634, -), CAediting_1150861(1580647, -), CAediting_1150862(1580659, -), CAediting_1150863(1580686, -), CAediting_1150864(1580690, -), CAediting_1150865(1580699, -), CAediting_1150866(1580734, -), CAediting_1150867(1580802, -), CAediting_1150868(1580807, -), CAediting_1150869(1580887, -), CAediting_1150870(1583929, -), CAediting_1150871(1583931, -), CAediting_1150872(1583968, -), CAediting_1150873(1583992, -), CAediting_1150874(1584028, -), CAediting_1150875(1584034, -), CAediting_1150876(1584060, -), CAediting_1150877(1584549, -), CAediting_1150878(1584571, -), CAediting_1150879(1584619, -), CAediting_1150880(1584632, -), CAediting_1150881(1585101, -), CAediting_1150882(1585104, -), CAediting_1150883(1585271, -), CAediting_1150884(1585278, -), CAediting_1150885(1585380, -), CAediting_1150886(1585405, -), CAediting_1150887(1585409, -), CAediting_1150888(1585441, -), CAediting_1150889(1585634, -), CAediting_1150890(1585661, -), CAediting_1150891(1585683, -), CAediting_1150892(1588154, -), CAediting_1150893(1588229, -), CAediting_1150894(1588238, -), CAediting_1150895(1588264, -), CAediting_1150896(1588637, -), CAediting_1150897(1588640, -), CAediting_1150898(1589433, -), CAediting_1150899(1589456, -), CAediting_1150900(1589712, -), CAediting_1150901(1589733, -), CAediting_1150902(1589757, -), CAediting_1150903(1589865, -), CAediting_1150904(1589891, -), CAediting_1150905(1589892, -), CAediting_1150906(1589914, -), CAediting_1150907(1595776, -), CAediting_1150908(1596237, -), CAediting_1150909(1596267, -), CAediting_1150910(1596273, -), CAediting_1150911(1596751, -), CAediting_1150912(1597133, -), CAediting_1150913(1597134, -), CAediting_1150914(1598338, -), CAediting_1150915(1599325, -), CAediting_1150916(1599618, -), CAediting_1150917(1599619, -), CAediting_1150918(1599624, -), CAediting_1150919(1599688, -), CAediting_1150920(1600272, -), CAediting_1150921(1600288, -), CAediting_1150922(1600289, -), CAediting_1150923(1600299, -), CAediting_1150924(1600315, -), CAediting_1150925(1600319, -), CAediting_1150926(1600324, -), CAediting_1150927(1600354, -), CAediting_1150928(1600355, -), CAediting_1150929(1600583, -), CAediting_1150930(1600650, -), CAediting_1150931(1600651, -), CAediting_1150932(1600656, -), CAediting_1150933(1600659, -), CAediting_1150934(1600665, -), CAediting_1150935(1600733, -), CAediting_1150936(1600751, -), CAediting_1150937(1600761, -), CAediting_1150938(1600808, -), CAediting_1150939(1600824, -), CAediting_1150940(1602226, -), CAediting_1150941(1602258, -), CAediting_1150942(1602262, -), CAediting_1150943(1602443, -), CAediting_1150944(1602534, -), CAediting_1150945(1604137, -), CAediting_1150946(1608532, -), CAediting_1150947(1610047, -), CAediting_1150948(1610094, -), CAediting_1150949(1610133, -), CAediting_1150950(1610144, -), CAediting_1150951(1610197, -), CAediting_1150952(1610317, -), CAediting_1150953(1610395, -), CAediting_1150954(1610917, -), CAediting_1150955(1610946, -), CAediting_1150956(1610947, -), CAediting_1150957(1610949, -), CAediting_1150958(1610952, -), CAediting_1150959(1610973, -), CAediting_1150960(1610978, -), CAediting_1150961(1611041, -), CAediting_1150962(1611390, -), CAediting_1150963(1611414, -), CAediting_1150964(1611418, -), CAediting_1150965(1611469, -), CAediting_1150966(1611553, -), CAediting_1150967(1611588, -), CAediting_1150968(1611589, -), CAediting_1150969(1612092, -), CAediting_1150970(1613590, -), CAediting_1150971(1613591, -), CAediting_1150972(1615274, -), CAediting_1150973(1615277, -), CAediting_1150974(1615278, -), CAediting_1150975(1615389, -), CAediting_1150976(1618873, -),

Top

RNA editing positional annotations for SLC43A2 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_1150746chr17_1569883_-UTR3
CAediting_1150747chr17_1569889_-UTR3
CAediting_1150748chr17_1569895_-UTR3
CAediting_1150749chr17_1569897_-UTR3
CAediting_1150750chr17_1569898_-UTR3
CAediting_1150751chr17_1569899_-UTR3
CAediting_1150752chr17_1569901_-UTR3
CAediting_1150753chr17_1569902_-UTR3
CAediting_1150754chr17_1569903_-UTR3
CAediting_1150755chr17_1569904_-UTR3
CAediting_1150756chr17_1569905_-UTR3
CAediting_1150757chr17_1569917_-UTR3
CAediting_1150758chr17_1569921_-UTR3
CAediting_1150759chr17_1569935_-UTR3
CAediting_1150760chr17_1569940_-UTR3
CAediting_1150761chr17_1569964_-UTR3
CAediting_1150762chr17_1569977_-UTR3
CAediting_1150763chr17_1569984_-UTR3
CAediting_1150764chr17_1569985_-UTR3
CAediting_1150765chr17_1569999_-UTR3
CAediting_1150766chr17_1570009_-UTR3
CAediting_1150767chr17_1570016_-UTR3
CAediting_1150768chr17_1570020_-UTR3
CAediting_1150769chr17_1570026_-UTR3
CAediting_1150770chr17_1570052_-UTR3
CAediting_1150771chr17_1570058_-UTR3
CAediting_1150772chr17_1570061_-UTR3
CAediting_1150773chr17_1570130_-UTR3
CAediting_1150774chr17_1570143_-UTR3
CAediting_1150775chr17_1570157_-UTR3
CAediting_1150776chr17_1570160_-UTR3
CAediting_1150777chr17_1570165_-UTR3
CAediting_1150778chr17_1570166_-UTR3
CAediting_1150779chr17_1570246_-UTR3
CAediting_1150780chr17_1570309_-UTR3
CAediting_1150781chr17_1570310_-UTR3
CAediting_1150782chr17_1570583_-UTR3
CAediting_1150783chr17_1570584_-UTR3
CAediting_1150784chr17_1570592_-UTR3
CAediting_1150785chr17_1570598_-UTR3
CAediting_1150786chr17_1570681_-UTR3
CAediting_1150787chr17_1570759_-UTR3
CAediting_1150788chr17_1570767_-UTR3
CAediting_1150789chr17_1572907_-UTR3
CAediting_1150790chr17_1572914_-UTR3
CAediting_1150791chr17_1572916_-UTR3
CAediting_1150792chr17_1572928_-UTR3
CAediting_1150793chr17_1572929_-UTR3
CAediting_1150794chr17_1572930_-UTR3
CAediting_1150795chr17_1572938_-UTR3
CAediting_1150796chr17_1572943_-UTR3
CAediting_1150797chr17_1572952_-UTR3
CAediting_1150798chr17_1572956_-UTR3
CAediting_1150799chr17_1572990_-UTR3
CAediting_1150800chr17_1573005_-UTR3
CAediting_1150801chr17_1573027_-UTR3
CAediting_1150802chr17_1573051_-UTR3
CAediting_1150803chr17_1573067_-UTR3
CAediting_1150804chr17_1573081_-UTR3
CAediting_1150805chr17_1573093_-UTR3
CAediting_1150806chr17_1573094_-UTR3
CAediting_1150807chr17_1573106_-UTR3
CAediting_1150808chr17_1573116_-UTR3
CAediting_1150809chr17_1573653_-UTR3
CAediting_1150810chr17_1573657_-UTR3
CAediting_1150811chr17_1573680_-UTR3
CAediting_1150812chr17_1573716_-UTR3
CAediting_1150813chr17_1573717_-UTR3
CAediting_1150814chr17_1573725_-UTR3
CAediting_1150815chr17_1573728_-UTR3
CAediting_1150816chr17_1573731_-UTR3
CAediting_1150817chr17_1573735_-UTR3
CAediting_1150818chr17_1573741_-UTR3
CAediting_1150819chr17_1573748_-UTR3
CAediting_1150820chr17_1573752_-UTR3
CAediting_1150821chr17_1573758_-UTR3
CAediting_1150822chr17_1573783_-UTR3
CAediting_1150823chr17_1573784_-UTR3
CAediting_1150824chr17_1573850_-UTR3
CAediting_1150825chr17_1573864_-UTR3
CAediting_1150826chr17_1573869_-UTR3
CAediting_1150827chr17_1573882_-UTR3
CAediting_1150828chr17_1573890_-UTR3
CAediting_1150829chr17_1573891_-UTR3
CAediting_1150830chr17_1576195_-intronic
CAediting_1150831chr17_1578561_-ncRNA_exonic
CAediting_1150832chr17_1578562_-ncRNA_exonic
CAediting_1150833chr17_1578580_-ncRNA_exonic
CAediting_1150834chr17_1578625_-ncRNA_exonic
CAediting_1150835chr17_1578656_-ncRNA_exonic
CAediting_1150836chr17_1578665_-ncRNA_exonic
CAediting_1150837chr17_1578666_-ncRNA_exonic
CAediting_1150838chr17_1578701_-ncRNA_exonic
CAediting_1150839chr17_1578706_-ncRNA_intronic
CAediting_1150840chr17_1578748_-ncRNA_intronic
CAediting_1150841chr17_1578884_-ncRNA_intronic
CAediting_1150842chr17_1579019_-ncRNA_intronic
CAediting_1150843chr17_1579583_-ncRNA_intronic
CAediting_1150844chr17_1579618_-ncRNA_intronic
CAediting_1150845chr17_1579682_-ncRNA_intronic
CAediting_1150846chr17_1579737_-ncRNA_intronic
CAediting_1150847chr17_1579742_-ncRNA_intronic
CAediting_1150848chr17_1579755_-ncRNA_intronic
CAediting_1150849chr17_1579824_-ncRNA_intronic
CAediting_1150850chr17_1580003_-ncRNA_intronic
CAediting_1150851chr17_1580038_-ncRNA_intronic
CAediting_1150852chr17_1580098_-ncRNA_intronic
CAediting_1150853chr17_1580104_-ncRNA_intronic
CAediting_1150854chr17_1580109_-ncRNA_intronic
CAediting_1150855chr17_1580191_-ncRNA_intronic
CAediting_1150856chr17_1580580_-ncRNA_intronic
CAediting_1150857chr17_1580597_-ncRNA_intronic
CAediting_1150858chr17_1580624_-ncRNA_intronic
CAediting_1150859chr17_1580629_-ncRNA_intronic
CAediting_1150860chr17_1580634_-ncRNA_intronic
CAediting_1150861chr17_1580647_-ncRNA_intronic
CAediting_1150862chr17_1580659_-ncRNA_intronic
CAediting_1150863chr17_1580686_-ncRNA_intronic
CAediting_1150864chr17_1580690_-ncRNA_intronic
CAediting_1150865chr17_1580699_-ncRNA_intronic
CAediting_1150866chr17_1580734_-ncRNA_intronic
CAediting_1150867chr17_1580802_-ncRNA_intronic
CAediting_1150868chr17_1580807_-ncRNA_intronic
CAediting_1150869chr17_1580887_-ncRNA_intronic
CAediting_1150870chr17_1583929_-intronic
CAediting_1150871chr17_1583931_-intronic
CAediting_1150872chr17_1583968_-intronic
CAediting_1150873chr17_1583992_-intronic
CAediting_1150874chr17_1584028_-intronic
CAediting_1150875chr17_1584034_-intronic
CAediting_1150876chr17_1584060_-intronic
CAediting_1150877chr17_1584549_-intronic
CAediting_1150878chr17_1584571_-intronic
CAediting_1150879chr17_1584619_-intronic
CAediting_1150880chr17_1584632_-intronic
CAediting_1150881chr17_1585101_-intronic
CAediting_1150882chr17_1585104_-intronic
CAediting_1150883chr17_1585271_-ncRNA_exonic
CAediting_1150884chr17_1585278_-ncRNA_exonic
CAediting_1150885chr17_1585380_-ncRNA_exonic
CAediting_1150886chr17_1585405_-ncRNA_exonic
CAediting_1150887chr17_1585409_-ncRNA_exonic
CAediting_1150888chr17_1585441_-ncRNA_exonic
CAediting_1150889chr17_1585634_-ncRNA_exonic
CAediting_1150890chr17_1585661_-ncRNA_exonic
CAediting_1150891chr17_1585683_-ncRNA_exonic
CAediting_1150892chr17_1588154_-ncRNA_intronic
CAediting_1150893chr17_1588229_-ncRNA_intronic
CAediting_1150894chr17_1588238_-ncRNA_intronic
CAediting_1150895chr17_1588264_-ncRNA_intronic
CAediting_1150896chr17_1588637_-ncRNA_intronic
CAediting_1150897chr17_1588640_-ncRNA_intronic
CAediting_1150898chr17_1589433_-ncRNA_intronic
CAediting_1150899chr17_1589456_-ncRNA_intronic
CAediting_1150900chr17_1589712_-ncRNA_intronic
CAediting_1150901chr17_1589733_-ncRNA_intronic
CAediting_1150902chr17_1589757_-ncRNA_intronic
CAediting_1150903chr17_1589865_-ncRNA_intronic
CAediting_1150904chr17_1589891_-ncRNA_intronic
CAediting_1150905chr17_1589892_-ncRNA_intronic
CAediting_1150906chr17_1589914_-ncRNA_intronic
CAediting_1150907chr17_1595776_-ncRNA_intronic
CAediting_1150908chr17_1596237_-ncRNA_intronic
CAediting_1150909chr17_1596267_-ncRNA_intronic
CAediting_1150910chr17_1596273_-ncRNA_intronic
CAediting_1150911chr17_1596751_-ncRNA_intronic
CAediting_1150912chr17_1597133_-ncRNA_intronic
CAediting_1150913chr17_1597134_-ncRNA_intronic
CAediting_1150914chr17_1598338_-ncRNA_intronic
CAediting_1150915chr17_1599325_-ncRNA_intronic
CAediting_1150916chr17_1599618_-ncRNA_intronic
CAediting_1150917chr17_1599619_-ncRNA_intronic
CAediting_1150918chr17_1599624_-ncRNA_intronic
CAediting_1150919chr17_1599688_-ncRNA_intronic
CAediting_1150920chr17_1600272_-ncRNA_intronic
CAediting_1150921chr17_1600288_-ncRNA_intronic
CAediting_1150922chr17_1600289_-ncRNA_intronic
CAediting_1150923chr17_1600299_-ncRNA_intronic
CAediting_1150924chr17_1600315_-ncRNA_intronic
CAediting_1150925chr17_1600319_-ncRNA_intronic
CAediting_1150926chr17_1600324_-ncRNA_intronic
CAediting_1150927chr17_1600354_-ncRNA_intronic
CAediting_1150928chr17_1600355_-ncRNA_intronic
CAediting_1150929chr17_1600583_-ncRNA_intronic
CAediting_1150930chr17_1600650_-ncRNA_intronic
CAediting_1150931chr17_1600651_-ncRNA_intronic
CAediting_1150932chr17_1600656_-ncRNA_intronic
CAediting_1150933chr17_1600659_-ncRNA_intronic
CAediting_1150934chr17_1600665_-ncRNA_intronic
CAediting_1150935chr17_1600733_-ncRNA_intronic
CAediting_1150936chr17_1600751_-ncRNA_intronic
CAediting_1150937chr17_1600761_-ncRNA_intronic
CAediting_1150938chr17_1600808_-ncRNA_intronic
CAediting_1150939chr17_1600824_-ncRNA_intronic
CAediting_1150940chr17_1602226_-ncRNA_intronic
CAediting_1150941chr17_1602258_-ncRNA_intronic
CAediting_1150942chr17_1602262_-ncRNA_intronic
CAediting_1150943chr17_1602443_-ncRNA_intronic
CAediting_1150944chr17_1602534_-ncRNA_intronic
CAediting_1150945chr17_1604137_-ncRNA_intronic
CAediting_1150946chr17_1608532_-ncRNA_intronic
CAediting_1150947chr17_1610047_-ncRNA_intronic
CAediting_1150948chr17_1610094_-ncRNA_intronic
CAediting_1150949chr17_1610133_-ncRNA_intronic
CAediting_1150950chr17_1610144_-ncRNA_intronic
CAediting_1150951chr17_1610197_-ncRNA_intronic
CAediting_1150952chr17_1610317_-ncRNA_intronic
CAediting_1150953chr17_1610395_-ncRNA_intronic
CAediting_1150954chr17_1610917_-ncRNA_intronic
CAediting_1150955chr17_1610946_-ncRNA_intronic
CAediting_1150956chr17_1610947_-ncRNA_intronic
CAediting_1150957chr17_1610949_-ncRNA_intronic
CAediting_1150958chr17_1610952_-ncRNA_intronic
CAediting_1150959chr17_1610973_-ncRNA_intronic
CAediting_1150960chr17_1610978_-ncRNA_intronic
CAediting_1150961chr17_1611041_-ncRNA_intronic
CAediting_1150962chr17_1611390_-ncRNA_intronic
CAediting_1150963chr17_1611414_-ncRNA_intronic
CAediting_1150964chr17_1611418_-ncRNA_intronic
CAediting_1150965chr17_1611469_-ncRNA_intronic
CAediting_1150966chr17_1611553_-ncRNA_intronic
CAediting_1150967chr17_1611588_-ncRNA_intronic
CAediting_1150968chr17_1611589_-ncRNA_intronic
CAediting_1150969chr17_1612092_-ncRNA_intronic
CAediting_1150970chr17_1613590_-ncRNA_intronic
CAediting_1150971chr17_1613591_-ncRNA_intronic
CAediting_1150972chr17_1615274_-ncRNA_intronic
CAediting_1150973chr17_1615277_-ncRNA_intronic
CAediting_1150974chr17_1615278_-ncRNA_intronic
CAediting_1150975chr17_1615389_-ncRNA_intronic
CAediting_1150976chr17_1618873_-ncRNA_intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_1150746chr17_1569883_-SINEAluAluY
CAediting_1150747chr17_1569889_-SINEAluAluY
CAediting_1150748chr17_1569895_-SINEAluAluY
CAediting_1150749chr17_1569897_-SINEAluAluY
CAediting_1150750chr17_1569898_-SINEAluAluY
CAediting_1150751chr17_1569899_-SINEAluAluY
CAediting_1150752chr17_1569901_-SINEAluAluY
CAediting_1150753chr17_1569902_-SINEAluAluY
CAediting_1150754chr17_1569903_-SINEAluAluY
CAediting_1150755chr17_1569904_-SINEAluAluY
CAediting_1150756chr17_1569905_-SINEAluAluY
CAediting_1150757chr17_1569917_-SINEAluAluY
CAediting_1150758chr17_1569921_-SINEAluAluY
CAediting_1150759chr17_1569935_-SINEAluAluY
CAediting_1150760chr17_1569940_-SINEAluAluY
CAediting_1150761chr17_1569964_-SINEAluAluY
CAediting_1150762chr17_1569977_-SINEAluAluY
CAediting_1150763chr17_1569984_-SINEAluAluY
CAediting_1150764chr17_1569985_-SINEAluAluY
CAediting_1150765chr17_1569999_-SINEAluAluY
CAediting_1150766chr17_1570009_-SINEAluAluY
CAediting_1150767chr17_1570016_-SINEAluAluY
CAediting_1150768chr17_1570020_-SINEAluAluY
CAediting_1150769chr17_1570026_-SINEAluAluY
CAediting_1150770chr17_1570052_-SINEAluAluY
CAediting_1150771chr17_1570058_-SINEAluAluY
CAediting_1150772chr17_1570061_-SINEAluAluY
CAediting_1150773chr17_1570130_-SINEAluAluY
CAediting_1150774chr17_1570143_-SINEAluAluY
CAediting_1150775chr17_1570157_-SINEAluAluY
CAediting_1150776chr17_1570160_-SINEAluAluY
CAediting_1150777chr17_1570165_-SINEAluAluY
CAediting_1150778chr17_1570166_-SINEAluAluY
CAediting_1150779chr17_1570246_-SINEAluAluSz
CAediting_1150780chr17_1570309_-SINEAluAluSz
CAediting_1150781chr17_1570310_-SINEAluAluSz
CAediting_1150782chr17_1570583_-SINEAluAluYa5
CAediting_1150783chr17_1570584_-SINEAluAluYa5
CAediting_1150784chr17_1570592_-SINEAluAluYa5
CAediting_1150785chr17_1570598_-SINEAluAluYa5
CAediting_1150786chr17_1570681_-SINEAluAluYa5
CAediting_1150787chr17_1570759_-SINEAluAluYa5
CAediting_1150788chr17_1570767_-SINEAluAluYa5
CAediting_1150789chr17_1572907_-SINEAluAluJo
CAediting_1150790chr17_1572914_-SINEAluAluJo
CAediting_1150791chr17_1572916_-SINEAluAluJo
CAediting_1150792chr17_1572928_-SINEAluAluJo
CAediting_1150793chr17_1572929_-SINEAluAluJo
CAediting_1150794chr17_1572930_-SINEAluAluJo
CAediting_1150795chr17_1572938_-SINEAluAluJo
CAediting_1150796chr17_1572943_-SINEAluAluJo
CAediting_1150797chr17_1572952_-SINEAluAluJo
CAediting_1150798chr17_1572956_-SINEAluAluJo
CAediting_1150799chr17_1572990_-SINEAluAluJo
CAediting_1150800chr17_1573005_-SINEAluAluJo
CAediting_1150801chr17_1573027_-SINEAluAluJo
CAediting_1150802chr17_1573051_-SINEAluAluJo
CAediting_1150803chr17_1573067_-SINEAluAluJo
CAediting_1150804chr17_1573081_-SINEAluAluJo
CAediting_1150805chr17_1573093_-SINEAluAluJo
CAediting_1150806chr17_1573094_-SINEAluAluJo
CAediting_1150807chr17_1573106_-SINEAluAluJo
CAediting_1150808chr17_1573116_-SINEAluAluJo
CAediting_1150809chr17_1573653_-SINEAluAluSp
CAediting_1150810chr17_1573657_-SINEAluAluSp
CAediting_1150811chr17_1573680_-SINEAluAluSp
CAediting_1150812chr17_1573716_-SINEAluAluSp
CAediting_1150813chr17_1573717_-SINEAluAluSp
CAediting_1150814chr17_1573725_-SINEAluAluSp
CAediting_1150815chr17_1573728_-SINEAluAluSp
CAediting_1150816chr17_1573731_-SINEAluAluSp
CAediting_1150817chr17_1573735_-SINEAluAluSp
CAediting_1150818chr17_1573741_-SINEAluAluSp
CAediting_1150819chr17_1573748_-SINEAluAluSp
CAediting_1150820chr17_1573752_-SINEAluAluSp
CAediting_1150821chr17_1573758_-SINEAluAluSp
CAediting_1150822chr17_1573783_-SINEAluAluSp
CAediting_1150823chr17_1573784_-SINEAluAluSp
CAediting_1150824chr17_1573850_-SINEAluAluSp
CAediting_1150825chr17_1573864_-SINEAluAluSp
CAediting_1150826chr17_1573869_-SINEAluAluSp
CAediting_1150827chr17_1573882_-SINEAluAluSp
CAediting_1150828chr17_1573890_-SINEAluAluSp
CAediting_1150829chr17_1573891_-SINEAluAluSp
CAediting_1150830chr17_1576195_-SINEAluAluSx1
CAediting_1150831chr17_1578561_-SINEAluAluSg
CAediting_1150832chr17_1578562_-SINEAluAluSg
CAediting_1150833chr17_1578580_-SINEAluAluSg
CAediting_1150834chr17_1578625_-SINEAluAluSg
CAediting_1150835chr17_1578656_-SINEAluAluSg
CAediting_1150836chr17_1578665_-SINEAluAluSg
CAediting_1150837chr17_1578666_-SINEAluAluSg
CAediting_1150838chr17_1578701_-SINEAluAluSg
CAediting_1150839chr17_1578706_-SINEAluAluSg
CAediting_1150840chr17_1578748_-SINEAluAluSg
CAediting_1150841chr17_1578884_-SINEAluAluSx1
CAediting_1150842chr17_1579019_-SINEAluAluSx1
CAediting_1150843chr17_1579583_-SINEAluAluJb
CAediting_1150844chr17_1579618_-SINEAluAluJb
CAediting_1150845chr17_1579682_-SINEAluAluJb
CAediting_1150846chr17_1579737_-SINEAluAluJb
CAediting_1150847chr17_1579742_-SINEAluAluJb
CAediting_1150848chr17_1579755_-SINEAluAluJb
CAediting_1150849chr17_1579824_-SINEAluAluJb
CAediting_1150850chr17_1580003_-SINEAluAluSx
CAediting_1150851chr17_1580038_-SINEAluAluSx
CAediting_1150852chr17_1580098_-SINEAluAluSx
CAediting_1150853chr17_1580104_-SINEAluAluSx
CAediting_1150854chr17_1580109_-SINEAluAluSx
CAediting_1150855chr17_1580191_-SINEAluAluSx
CAediting_1150856chr17_1580580_-SINEAluAluSx
CAediting_1150857chr17_1580597_-SINEAluAluSx
CAediting_1150858chr17_1580624_-SINEAluAluSx
CAediting_1150859chr17_1580629_-SINEAluAluSx
CAediting_1150860chr17_1580634_-SINEAluAluSx
CAediting_1150861chr17_1580647_-SINEAluAluSx
CAediting_1150862chr17_1580659_-SINEAluAluSx
CAediting_1150863chr17_1580686_-SINEAluAluSx
CAediting_1150864chr17_1580690_-SINEAluAluSx
CAediting_1150865chr17_1580699_-SINEAluAluSx
CAediting_1150866chr17_1580734_-SINEAluAluJb
CAediting_1150867chr17_1580802_-SINEAluAluJb
CAediting_1150868chr17_1580807_-SINEAluAluJb
CAediting_1150869chr17_1580887_-SINEAluAluJb
CAediting_1150870chr17_1583929_-SINEAluAluSc8
CAediting_1150871chr17_1583931_-SINEAluAluSc8
CAediting_1150872chr17_1583968_-SINEAluAluSc8
CAediting_1150873chr17_1583992_-SINEAluAluSc8
CAediting_1150874chr17_1584028_-SINEAluAluSc8
CAediting_1150875chr17_1584034_-SINEAluAluSc8
CAediting_1150876chr17_1584060_-SINEAluAluSc8
CAediting_1150877chr17_1584549_-SINEAluAluY
CAediting_1150878chr17_1584571_-SINEAluAluY
CAediting_1150879chr17_1584619_-SINEAluAluY
CAediting_1150880chr17_1584632_-SINEAluAluY
CAediting_1150881chr17_1585101_-SINEAluAlu
CAediting_1150882chr17_1585104_-SINEAluAlu
CAediting_1150883chr17_1585271_-SINEAluAluSz6
CAediting_1150884chr17_1585278_-SINEAluAluSz6
CAediting_1150885chr17_1585380_-SINEAluAluSz6
CAediting_1150886chr17_1585405_-SINEAluAluSz6
CAediting_1150887chr17_1585409_-SINEAluAluSz6
CAediting_1150888chr17_1585441_-SINEAluAluSz6
CAediting_1150889chr17_1585634_-SINEAluAluJr4
CAediting_1150890chr17_1585661_-SINEAluAluJr4
CAediting_1150891chr17_1585683_-SINEAluAluJr4
CAediting_1150892chr17_1588154_-SINEAluAluSq2
CAediting_1150893chr17_1588229_-SINEAluAluSq2
CAediting_1150894chr17_1588238_-SINEAluAluSq2
CAediting_1150895chr17_1588264_-SINEAluAluSq2
CAediting_1150896chr17_1588637_-SINEAluAluJo
CAediting_1150897chr17_1588640_-SINEAluAluJo
CAediting_1150898chr17_1589433_-SINEAluAluJo
CAediting_1150899chr17_1589456_-SINEAluAluJo
CAediting_1150900chr17_1589712_-SINEAluAluSg7
CAediting_1150901chr17_1589733_-SINEAluAluSg7
CAediting_1150902chr17_1589757_-SINEAluAluSg7
CAediting_1150903chr17_1589865_-SINEAluAluSg7
CAediting_1150904chr17_1589891_-SINEAluAluSg7
CAediting_1150905chr17_1589892_-SINEAluAluSg7
CAediting_1150906chr17_1589914_-SINEAluAluSg7
CAediting_1150907chr17_1595776_-SINEAluAluJr
CAediting_1150908chr17_1596237_-SINEAluAluSx3
CAediting_1150909chr17_1596267_-SINEAluAluSx3
CAediting_1150910chr17_1596273_-SINEAluAluSx3
CAediting_1150911chr17_1596751_-SINEAluAluSx
CAediting_1150912chr17_1597133_-SINEAluAluSg
CAediting_1150913chr17_1597134_-SINEAluAluSg
CAediting_1150914chr17_1598338_-SINEAluAluSg7
CAediting_1150915chr17_1599325_-SINEAluAluSc
CAediting_1150916chr17_1599618_-SINEAluAluSx1
CAediting_1150917chr17_1599619_-SINEAluAluSx1
CAediting_1150918chr17_1599624_-SINEAluAluSx1
CAediting_1150919chr17_1599688_-SINEAluAluSx1
CAediting_1150920chr17_1600272_-SINEAluAluSx1
CAediting_1150921chr17_1600288_-SINEAluAluSx1
CAediting_1150922chr17_1600289_-SINEAluAluSx1
CAediting_1150923chr17_1600299_-SINEAluAluSx1
CAediting_1150924chr17_1600315_-SINEAluAluSx1
CAediting_1150925chr17_1600319_-SINEAluAluSx1
CAediting_1150926chr17_1600324_-SINEAluAluSx1
CAediting_1150927chr17_1600354_-SINEAluAluSx1
CAediting_1150928chr17_1600355_-SINEAluAluSx1
CAediting_1150929chr17_1600583_-SINEAluAluSx1
CAediting_1150930chr17_1600650_-SINEAluAluSx1
CAediting_1150931chr17_1600651_-SINEAluAluSx1
CAediting_1150932chr17_1600656_-SINEAluAluSx1
CAediting_1150933chr17_1600659_-SINEAluAluSx1
CAediting_1150934chr17_1600665_-SINEAluAluSx1
CAediting_1150935chr17_1600733_-SINEAluAluSx1
CAediting_1150936chr17_1600751_-SINEAluAluSx1
CAediting_1150937chr17_1600761_-SINEAluAluSx1
CAediting_1150938chr17_1600808_-SINEAluAluSx1
CAediting_1150939chr17_1600824_-SINEAluAluSx1
CAediting_1150940chr17_1602226_-SINEAluAluJr4
CAediting_1150941chr17_1602258_-SINEAluAluJr4
CAediting_1150942chr17_1602262_-SINEAluAluJr4
CAediting_1150943chr17_1602443_-SINEAluAluSx1
CAediting_1150944chr17_1602534_-SINEAluAluSx1
CAediting_1150945chr17_1604137_-SINEAluAluSx
CAediting_1150946chr17_1608532_-SINEAluAluSx
CAediting_1150947chr17_1610047_-SINEAluAluSq2
CAediting_1150948chr17_1610094_-SINEAluAluSq2
CAediting_1150949chr17_1610133_-SINEAluAluSq2
CAediting_1150950chr17_1610144_-SINEAluAluSq2
CAediting_1150951chr17_1610197_-SINEAluAluSq2
CAediting_1150952chr17_1610317_-SINEAluAluJr
CAediting_1150953chr17_1610395_-SINEAluAluJr
CAediting_1150954chr17_1610917_-SINEAluAluSg4
CAediting_1150955chr17_1610946_-SINEAluAluSg4
CAediting_1150956chr17_1610947_-SINEAluAluSg4
CAediting_1150957chr17_1610949_-SINEAluAluSg4
CAediting_1150958chr17_1610952_-SINEAluAluSg4
CAediting_1150959chr17_1610973_-SINEAluAluSg4
CAediting_1150960chr17_1610978_-SINEAluAluSg4
CAediting_1150961chr17_1611041_-SINEAluAluSg4
CAediting_1150962chr17_1611390_-SINEAluAluSx
CAediting_1150963chr17_1611414_-SINEAluAluSx
CAediting_1150964chr17_1611418_-SINEAluAluSx
CAediting_1150965chr17_1611469_-SINEAluAluSx
CAediting_1150966chr17_1611553_-SINEAluAluSx
CAediting_1150967chr17_1611588_-SINEAluAluSx
CAediting_1150968chr17_1611589_-SINEAluAluSx
CAediting_1150969chr17_1612092_-SINEAluAluSz
CAediting_1150970chr17_1613590_-SINEAluAluSq2
CAediting_1150971chr17_1613591_-SINEAluAluSq2
CAediting_1150972chr17_1615274_-SINEAluAluSx1
CAediting_1150973chr17_1615277_-SINEAluAluSx1
CAediting_1150974chr17_1615278_-SINEAluAluSx1
CAediting_1150975chr17_1615389_-SINEAluAluSx1
CAediting_1150976chr17_1618873_-SINEAluAluSx

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RNA A-to-I editing events in the alternative splicing sites for SLC43A2

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000167703.13.SLC43A2.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000167703.13.SLC43A2.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for SLC43A2

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for SLC43A2

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for SLC43A2

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_980496chr14_31014685_-ENSG00000167703.13ENST00000571650hsa-miR-624-3p157506115750666mer15750601575080143-19.91
CAediting_688080chr9_63819626_+ENSG00000167703.13ENST00000572801hsa-miR-4477b159162315916297mer-m815916221591643142-10.24
CAediting_688080chr9_63819626_+ENSG00000167703.13ENST00000576721hsa-miR-4477b159162315916297mer-m815916221591643142-10.24
CAediting_688080chr9_63819626_+ENSG00000167703.13ENST00000571376hsa-miR-4477b159162315916297mer-m815916221591643142-10.24
CAediting_77128chr1_85133844_+ENSG00000167703.13ENST00000571650hsa-miR-4423-3p157467715746837mer-m815746761574696140-16.02
CAediting_580943chr7_100356700_+ENSG00000167703.13ENST00000571650hsa-miR-6840-3p157547215754787mer-m815754711575492143-26.71
CAediting_524911chr7_5495852_-ENSG00000167703.13ENST00000571650hsa-miR-589-3p157537515753817mer-m815753741575397156-20.97
CAediting_1229415chr17_67471547_+ENSG00000167703.13ENST00000572801hsa-miR-548aa161322816132347mer-m816132271613251140-10.07
CAediting_580943chr7_100356700_+ENSG00000167703.13ENST00000572801hsa-miR-6840-3p159158715915937mer-m815915861591606142-22.63
CAediting_580943chr7_100356700_+ENSG00000167703.13ENST00000576721hsa-miR-6840-3p159158715915937mer-m815915861591606142-22.63
CAediting_1229415chr17_67471547_+ENSG00000167703.13ENST00000571376hsa-miR-548aa161322816132347mer-m816132271613251140-10.07
CAediting_468389chr6_31355314_-ENSG00000167703.13ENST00000571650hsa-miR-6891-5p157495715749637mer-m815749561574974143-32.29
CAediting_468389chr6_31355314_-ENSG00000167703.13ENST00000572801hsa-miR-6891-5p159321215932187mer-m815932111593229151-23.7
CAediting_468389chr6_31355314_-ENSG00000167703.13ENST00000576721hsa-miR-6891-5p159321215932187mer-m815932111593229151-23.7
CAediting_468389chr6_31355314_-ENSG00000167703.13ENST00000571376hsa-miR-6891-5p159321215932187mer-m815932111593229151-23.7

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1054808chr15_66496985_-ENSG00000167703.13ENST00000571650hsa-miR-4512157459415745996mer15745931574615147-34.4
CAediting_580943chr7_100356700_+ENSG00000167703.13ENST00000571650hsa-miR-6840-3p157450515745117mer-m815745041574525142-22.41

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for SLC43A2

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for SLC43A2

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
LGGCAediting_1150792chr17_1572928_-0.008044720378695980.273256152953306....
BRCACAediting_1150792chr17_1572928_-1.77693386195769e-050.372175495860322....
KIRCCAediting_1150792chr17_1572928_-0.03882065650368320.137542617457509....
BRCACAediting_1150795chr17_1572938_-2.10611123842961e-070.500249171858542....
KIRCCAediting_1150795chr17_1572938_-0.0002755801092292520.260337234645354....
BRCACAediting_1150796chr17_1572943_-0.001521329617337210.436689475437755....
KIRCCAediting_1150796chr17_1572943_-0.01973824184740480.220047180220299....
LGGCAediting_1150804chr17_1573081_-..0.02693230798847270.266387103258482..
KIRCCAediting_1150804chr17_1573081_-0.001489109663744610.253048750087773....
BRCACAediting_1150828chr17_1573890_-0.007846848931914670.3517697222647030.03486660263030.282547577779578..
STADCAediting_1150828chr17_1573890_-0.02021078928304470.315309259139165..0.03752269995110530.283847305205373
KIRCCAediting_1150828chr17_1573890_-0.002414368234109970.291697829448316....

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Relation with cancer stages for SLC43A2

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.
BRCApathologic_stageCAediting_1150804chr17_1573081_-0.02076093243948960.29081907230646

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Relation with survival for SLC43A2

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR
BRCACAediting_1150792chr17_1572928_-6.50441214752329e-050.01200430.00164317
KIRCCAediting_1150792chr17_1572928_-0.003354809773850160.022176213.3804
KIRCCAediting_1150804chr17_1573081_-0.01080768506476860.008527861.0505

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RelatedDrugs for SLC43A2

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for SLC43A2

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource
SLC43A2C0023893Liver Cirrhosis, Experimental1CTD_human