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Editing gene: SLC38A10 (CAeditome ID:124565)

Gene summary for SLC38A10

Gene summary

Gene information	Gene symbol	SLC38A10
	Gene ID	124565
	Gene name	solute carrier family 38 member 10
	Synonyms	PP1744
	Cytomap	17q25.3
	Type of gene	protein-coding
	Description	putative sodium-coupled neutral amino acid transporter 10
	Modification date	20210518
	UniProtAcc	Q9HBR0
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
SLC38A10	GO:0005794	Putative sodium-coupled neutral amino acid transporter 10	0000052

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RNA A-to-I events for SLC38A10

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000157637.11

RNA A-to-I editing events in Cancer.

CAediting_1245406(81247560, -), CAediting_1245407(81247567, -), CAediting_1245408(81247569, -), CAediting_1245409(81247581, -), CAediting_1245410(81247582, -), CAediting_1245411(81247583, -), CAediting_1245412(81247604, -), CAediting_1245413(81247608, -), CAediting_1245414(81247609, -), CAediting_1245415(81247622, -), CAediting_1245416(81247634, -), CAediting_1245417(81247659, -), CAediting_1245418(81247715, -), CAediting_1245419(81247719, -), CAediting_1245420(81247722, -), CAediting_1245421(81247729, -), CAediting_1245422(81247732, -), CAediting_1245423(81247754, -), CAediting_1245424(81247772, -), CAediting_1245425(81247779, -), CAediting_1245426(81247784, -), CAediting_1245427(81247791, -), CAediting_1245428(81247794, -), CAediting_1245429(81247815, -), CAediting_1245430(81247835, -), CAediting_1245431(81247971, -), CAediting_1245432(81247972, -), CAediting_1245433(81248023, -), CAediting_1245434(81248025, -), CAediting_1245435(81248030, -), CAediting_1245436(81248034, -), CAediting_1245437(81248054, -), CAediting_1245438(81248086, -), CAediting_1245439(81248090, -), CAediting_1245440(81248152, -), CAediting_1245441(81248162, -), CAediting_1245442(81248163, -), CAediting_1245443(81248183, -), CAediting_1245444(81248191, -), CAediting_1245445(81248194, -), CAediting_1245446(81248198, -), CAediting_1245447(81248213, -), CAediting_1245448(81248224, -), CAediting_1245449(81248229, -), CAediting_1245450(81248230, -), CAediting_1245451(81254478, -), CAediting_1245452(81254513, -), CAediting_1245453(81254520, -), CAediting_1245454(81254524, -), CAediting_1245455(81254533, -), CAediting_1245456(81254544, -), CAediting_1245457(81254553, -), CAediting_1245458(81254555, -), CAediting_1245459(81254578, -), CAediting_1245460(81254610, -), CAediting_1245461(81254616, -), CAediting_1245462(81254623, -), CAediting_1245463(81254639, -), CAediting_1245464(81254678, -), CAediting_1245465(81254683, -), CAediting_1245466(81254727, -), CAediting_1245467(81254741, -), CAediting_1245468(81255486, -), CAediting_1245469(81255730, -), CAediting_1245470(81255751, -), CAediting_1245471(81255774, -), CAediting_1245472(81255778, -), CAediting_1245473(81255779, -), CAediting_1245474(81255829, -), CAediting_1245475(81255836, -), CAediting_1245476(81255837, -), CAediting_1245477(81255861, -), CAediting_1245478(81255871, -), CAediting_1245479(81255882, -), CAediting_1245480(81255895, -), CAediting_1245481(81255896, -), CAediting_1245482(81255899, -), CAediting_1245483(81255905, -), CAediting_1245484(81255906, -), CAediting_1245485(81255913, -), CAediting_1245486(81255920, -), CAediting_1245487(81255922, -), CAediting_1245488(81255925, -), CAediting_1245489(81255956, -), CAediting_1245490(81257155, -), CAediting_1245491(81257180, -), CAediting_1245492(81257196, -), CAediting_1245493(81257217, -), CAediting_1245494(81257260, -), CAediting_1245495(81257269, -), CAediting_1245496(81257271, -), CAediting_1245497(81257272, -), CAediting_1245498(81257273, -), CAediting_1245499(81257289, -), CAediting_1245500(81257299, -), CAediting_1245501(81257333, -), CAediting_1245502(81257342, -), CAediting_1245503(81257347, -), CAediting_1245504(81257363, -), CAediting_1245505(81268466, -), CAediting_1245506(81268469, -), CAediting_1245507(81268502, -), CAediting_1245508(81268503, -), CAediting_1245509(81268508, -), CAediting_1245510(81268544, -), CAediting_1245511(81268552, -), CAediting_1245512(81268562, -), CAediting_1245513(81269239, -), CAediting_1245514(81269427, -), CAediting_1245515(81269431, -), CAediting_1245516(81269882, -), CAediting_1245517(81269888, -), CAediting_1245518(81269959, -), CAediting_1245519(81274961, -), CAediting_1245520(81275044, -), CAediting_1245521(81275057, -), CAediting_1245522(81275066, -), CAediting_1245523(81275070, -), CAediting_1245524(81275073, -), CAediting_1245525(81275074, -), CAediting_1245526(81275085, -), CAediting_1245527(81275263, -), CAediting_1245528(81275324, -), CAediting_1245529(81276454, -), CAediting_1245530(81276520, -), CAediting_1245531(81283666, -), CAediting_1245532(81283742, -), CAediting_1245533(81283746, -), CAediting_1245534(81283774, -), CAediting_1245535(81283790, -), CAediting_1245536(81283793, -), CAediting_1245537(81283838, -), CAediting_1245538(81283882, -), CAediting_1245539(81284275, -),

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RNA editing positional annotations for SLC38A10 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1245406	chr17_81247560_-	ncRNA_exonic
CAediting_1245407	chr17_81247567_-	ncRNA_exonic
CAediting_1245408	chr17_81247569_-	ncRNA_exonic
CAediting_1245409	chr17_81247581_-	ncRNA_exonic
CAediting_1245410	chr17_81247582_-	ncRNA_exonic
CAediting_1245411	chr17_81247583_-	ncRNA_exonic
CAediting_1245412	chr17_81247604_-	ncRNA_exonic
CAediting_1245413	chr17_81247608_-	ncRNA_exonic
CAediting_1245414	chr17_81247609_-	ncRNA_exonic
CAediting_1245415	chr17_81247622_-	ncRNA_exonic
CAediting_1245416	chr17_81247634_-	ncRNA_exonic
CAediting_1245417	chr17_81247659_-	ncRNA_intronic
CAediting_1245418	chr17_81247715_-	ncRNA_intronic
CAediting_1245419	chr17_81247719_-	ncRNA_intronic
CAediting_1245420	chr17_81247722_-	ncRNA_intronic
CAediting_1245421	chr17_81247729_-	ncRNA_intronic
CAediting_1245422	chr17_81247732_-	ncRNA_intronic
CAediting_1245423	chr17_81247754_-	ncRNA_intronic
CAediting_1245424	chr17_81247772_-	ncRNA_intronic
CAediting_1245425	chr17_81247779_-	ncRNA_intronic
CAediting_1245426	chr17_81247784_-	ncRNA_intronic
CAediting_1245427	chr17_81247791_-	ncRNA_intronic
CAediting_1245428	chr17_81247794_-	ncRNA_intronic
CAediting_1245429	chr17_81247815_-	ncRNA_intronic
CAediting_1245430	chr17_81247835_-	ncRNA_intronic
CAediting_1245431	chr17_81247971_-	ncRNA_intronic
CAediting_1245432	chr17_81247972_-	ncRNA_intronic
CAediting_1245433	chr17_81248023_-	ncRNA_intronic
CAediting_1245434	chr17_81248025_-	ncRNA_intronic
CAediting_1245435	chr17_81248030_-	ncRNA_intronic
CAediting_1245436	chr17_81248034_-	ncRNA_intronic
CAediting_1245437	chr17_81248054_-	ncRNA_intronic
CAediting_1245438	chr17_81248086_-	ncRNA_intronic
CAediting_1245439	chr17_81248090_-	ncRNA_intronic
CAediting_1245440	chr17_81248152_-	ncRNA_intronic
CAediting_1245441	chr17_81248162_-	ncRNA_intronic
CAediting_1245442	chr17_81248163_-	ncRNA_intronic
CAediting_1245443	chr17_81248183_-	ncRNA_intronic
CAediting_1245444	chr17_81248191_-	ncRNA_intronic
CAediting_1245445	chr17_81248194_-	ncRNA_intronic
CAediting_1245446	chr17_81248198_-	ncRNA_intronic
CAediting_1245447	chr17_81248213_-	ncRNA_intronic
CAediting_1245448	chr17_81248224_-	ncRNA_intronic
CAediting_1245449	chr17_81248229_-	ncRNA_intronic
CAediting_1245450	chr17_81248230_-	ncRNA_intronic
CAediting_1245451	chr17_81254478_-	ncRNA_intronic
CAediting_1245452	chr17_81254513_-	ncRNA_intronic
CAediting_1245453	chr17_81254520_-	ncRNA_intronic
CAediting_1245454	chr17_81254524_-	ncRNA_intronic
CAediting_1245455	chr17_81254533_-	ncRNA_intronic
CAediting_1245456	chr17_81254544_-	ncRNA_intronic
CAediting_1245457	chr17_81254553_-	ncRNA_intronic
CAediting_1245458	chr17_81254555_-	ncRNA_intronic
CAediting_1245459	chr17_81254578_-	ncRNA_intronic
CAediting_1245460	chr17_81254610_-	ncRNA_intronic
CAediting_1245461	chr17_81254616_-	ncRNA_intronic
CAediting_1245462	chr17_81254623_-	ncRNA_intronic
CAediting_1245463	chr17_81254639_-	ncRNA_intronic
CAediting_1245464	chr17_81254678_-	ncRNA_intronic
CAediting_1245465	chr17_81254683_-	ncRNA_intronic
CAediting_1245466	chr17_81254727_-	ncRNA_intronic
CAediting_1245467	chr17_81254741_-	ncRNA_intronic
CAediting_1245468	chr17_81255486_-	ncRNA_intronic
CAediting_1245469	chr17_81255730_-	ncRNA_intronic
CAediting_1245470	chr17_81255751_-	ncRNA_intronic
CAediting_1245471	chr17_81255774_-	ncRNA_intronic
CAediting_1245472	chr17_81255778_-	ncRNA_intronic
CAediting_1245473	chr17_81255779_-	ncRNA_intronic
CAediting_1245474	chr17_81255829_-	ncRNA_intronic
CAediting_1245475	chr17_81255836_-	ncRNA_intronic
CAediting_1245476	chr17_81255837_-	ncRNA_intronic
CAediting_1245477	chr17_81255861_-	ncRNA_intronic
CAediting_1245478	chr17_81255871_-	ncRNA_intronic
CAediting_1245479	chr17_81255882_-	ncRNA_intronic
CAediting_1245480	chr17_81255895_-	ncRNA_intronic
CAediting_1245481	chr17_81255896_-	ncRNA_intronic
CAediting_1245482	chr17_81255899_-	ncRNA_intronic
CAediting_1245483	chr17_81255905_-	ncRNA_intronic
CAediting_1245484	chr17_81255906_-	ncRNA_intronic
CAediting_1245485	chr17_81255913_-	ncRNA_intronic
CAediting_1245486	chr17_81255920_-	ncRNA_intronic
CAediting_1245487	chr17_81255922_-	ncRNA_intronic
CAediting_1245488	chr17_81255925_-	ncRNA_intronic
CAediting_1245489	chr17_81255956_-	ncRNA_intronic
CAediting_1245490	chr17_81257155_-	ncRNA_intronic
CAediting_1245491	chr17_81257180_-	ncRNA_intronic
CAediting_1245492	chr17_81257196_-	ncRNA_intronic
CAediting_1245493	chr17_81257217_-	ncRNA_intronic
CAediting_1245494	chr17_81257260_-	ncRNA_intronic
CAediting_1245495	chr17_81257269_-	ncRNA_intronic
CAediting_1245496	chr17_81257271_-	ncRNA_intronic
CAediting_1245497	chr17_81257272_-	ncRNA_intronic
CAediting_1245498	chr17_81257273_-	ncRNA_intronic
CAediting_1245499	chr17_81257289_-	ncRNA_intronic
CAediting_1245500	chr17_81257299_-	ncRNA_intronic
CAediting_1245501	chr17_81257333_-	ncRNA_intronic
CAediting_1245502	chr17_81257342_-	ncRNA_intronic
CAediting_1245503	chr17_81257347_-	ncRNA_intronic
CAediting_1245504	chr17_81257363_-	ncRNA_intronic
CAediting_1245505	chr17_81268466_-	ncRNA_intronic
CAediting_1245506	chr17_81268469_-	ncRNA_intronic
CAediting_1245507	chr17_81268502_-	ncRNA_intronic
CAediting_1245508	chr17_81268503_-	ncRNA_intronic
CAediting_1245509	chr17_81268508_-	ncRNA_intronic
CAediting_1245510	chr17_81268544_-	ncRNA_intronic
CAediting_1245511	chr17_81268552_-	ncRNA_intronic
CAediting_1245512	chr17_81268562_-	ncRNA_intronic
CAediting_1245513	chr17_81269239_-	ncRNA_intronic
CAediting_1245514	chr17_81269427_-	ncRNA_intronic
CAediting_1245515	chr17_81269431_-	ncRNA_intronic
CAediting_1245516	chr17_81269882_-	ncRNA_intronic
CAediting_1245517	chr17_81269888_-	ncRNA_intronic
CAediting_1245518	chr17_81269959_-	ncRNA_intronic
CAediting_1245519	chr17_81274961_-	ncRNA_intronic
CAediting_1245520	chr17_81275044_-	ncRNA_intronic
CAediting_1245521	chr17_81275057_-	ncRNA_intronic
CAediting_1245522	chr17_81275066_-	ncRNA_intronic
CAediting_1245523	chr17_81275070_-	ncRNA_intronic
CAediting_1245524	chr17_81275073_-	ncRNA_intronic
CAediting_1245525	chr17_81275074_-	ncRNA_intronic
CAediting_1245526	chr17_81275085_-	ncRNA_intronic
CAediting_1245527	chr17_81275263_-	ncRNA_intronic
CAediting_1245528	chr17_81275324_-	ncRNA_intronic
CAediting_1245529	chr17_81276454_-	ncRNA_intronic
CAediting_1245530	chr17_81276520_-	ncRNA_intronic
CAediting_1245531	chr17_81283666_-	ncRNA_intronic
CAediting_1245532	chr17_81283742_-	ncRNA_intronic
CAediting_1245533	chr17_81283746_-	ncRNA_intronic
CAediting_1245534	chr17_81283774_-	ncRNA_intronic
CAediting_1245535	chr17_81283790_-	ncRNA_intronic
CAediting_1245536	chr17_81283793_-	ncRNA_intronic
CAediting_1245537	chr17_81283838_-	ncRNA_intronic
CAediting_1245538	chr17_81283882_-	ncRNA_intronic
CAediting_1245539	chr17_81284275_-	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1245406	chr17_81247560_-	SINE	Alu	AluJo
CAediting_1245407	chr17_81247567_-	SINE	Alu	AluJo
CAediting_1245408	chr17_81247569_-	SINE	Alu	AluJo
CAediting_1245409	chr17_81247581_-	SINE	Alu	AluJo
CAediting_1245410	chr17_81247582_-	SINE	Alu	AluJo
CAediting_1245411	chr17_81247583_-	SINE	Alu	AluJo
CAediting_1245412	chr17_81247604_-	SINE	Alu	AluJo
CAediting_1245413	chr17_81247608_-	SINE	Alu	AluJo
CAediting_1245414	chr17_81247609_-	SINE	Alu	AluJo
CAediting_1245415	chr17_81247622_-	SINE	Alu	AluJo
CAediting_1245416	chr17_81247634_-	SINE	Alu	AluJo
CAediting_1245417	chr17_81247659_-	SINE	Alu	AluJo
CAediting_1245418	chr17_81247715_-	SINE	Alu	AluJo
CAediting_1245419	chr17_81247719_-	SINE	Alu	AluJo
CAediting_1245420	chr17_81247722_-	SINE	Alu	AluJo
CAediting_1245421	chr17_81247729_-	SINE	Alu	AluJo
CAediting_1245422	chr17_81247732_-	SINE	Alu	AluJo
CAediting_1245423	chr17_81247754_-	SINE	Alu	AluJo
CAediting_1245424	chr17_81247772_-	SINE	Alu	AluJo
CAediting_1245425	chr17_81247779_-	SINE	Alu	AluJo
CAediting_1245426	chr17_81247784_-	SINE	Alu	AluJo
CAediting_1245427	chr17_81247791_-	SINE	Alu	AluJo
CAediting_1245428	chr17_81247794_-	SINE	Alu	AluJo
CAediting_1245429	chr17_81247815_-	SINE	Alu	AluJo
CAediting_1245430	chr17_81247835_-	SINE	Alu	AluJo
CAediting_1245431	chr17_81247971_-	SINE	Alu	AluY
CAediting_1245432	chr17_81247972_-	SINE	Alu	AluY
CAediting_1245433	chr17_81248023_-	SINE	Alu	AluY
CAediting_1245434	chr17_81248025_-	SINE	Alu	AluY
CAediting_1245435	chr17_81248030_-	SINE	Alu	AluY
CAediting_1245436	chr17_81248034_-	SINE	Alu	AluY
CAediting_1245437	chr17_81248054_-	SINE	Alu	AluY
CAediting_1245438	chr17_81248086_-	SINE	Alu	AluY
CAediting_1245439	chr17_81248090_-	SINE	Alu	AluY
CAediting_1245440	chr17_81248152_-	SINE	Alu	AluY
CAediting_1245441	chr17_81248162_-	SINE	Alu	AluY
CAediting_1245442	chr17_81248163_-	SINE	Alu	AluY
CAediting_1245443	chr17_81248183_-	SINE	Alu	AluY
CAediting_1245444	chr17_81248191_-	SINE	Alu	AluY
CAediting_1245445	chr17_81248194_-	SINE	Alu	AluY
CAediting_1245446	chr17_81248198_-	SINE	Alu	AluY
CAediting_1245447	chr17_81248213_-	SINE	Alu	AluY
CAediting_1245448	chr17_81248224_-	SINE	Alu	AluY
CAediting_1245449	chr17_81248229_-	SINE	Alu	AluY
CAediting_1245450	chr17_81248230_-	SINE	Alu	AluY
CAediting_1245451	chr17_81254478_-	SINE	Alu	AluSx1
CAediting_1245452	chr17_81254513_-	SINE	Alu	AluSx1
CAediting_1245453	chr17_81254520_-	SINE	Alu	AluSx1
CAediting_1245454	chr17_81254524_-	SINE	Alu	AluSx1
CAediting_1245455	chr17_81254533_-	SINE	Alu	AluSx1
CAediting_1245456	chr17_81254544_-	SINE	Alu	AluSx1
CAediting_1245457	chr17_81254553_-	SINE	Alu	AluSx1
CAediting_1245458	chr17_81254555_-	SINE	Alu	AluSx1
CAediting_1245459	chr17_81254578_-	SINE	Alu	AluSx1
CAediting_1245460	chr17_81254610_-	SINE	Alu	AluSx1
CAediting_1245461	chr17_81254616_-	SINE	Alu	AluSx1
CAediting_1245462	chr17_81254623_-	SINE	Alu	AluSx1
CAediting_1245463	chr17_81254639_-	SINE	Alu	AluSx1
CAediting_1245464	chr17_81254678_-	SINE	Alu	AluSx1
CAediting_1245465	chr17_81254683_-	SINE	Alu	AluSx1
CAediting_1245466	chr17_81254727_-	SINE	Alu	AluSx1
CAediting_1245467	chr17_81254741_-	SINE	Alu	AluSx1
CAediting_1245469	chr17_81255730_-	SINE	Alu	AluSz
CAediting_1245470	chr17_81255751_-	SINE	Alu	AluSz
CAediting_1245471	chr17_81255774_-	SINE	Alu	AluSz
CAediting_1245472	chr17_81255778_-	SINE	Alu	AluSz
CAediting_1245473	chr17_81255779_-	SINE	Alu	AluSz
CAediting_1245474	chr17_81255829_-	SINE	Alu	AluSz
CAediting_1245475	chr17_81255836_-	SINE	Alu	AluSz
CAediting_1245476	chr17_81255837_-	SINE	Alu	AluSz
CAediting_1245477	chr17_81255861_-	SINE	Alu	AluSz
CAediting_1245478	chr17_81255871_-	SINE	Alu	AluSz
CAediting_1245479	chr17_81255882_-	SINE	Alu	AluSz
CAediting_1245480	chr17_81255895_-	SINE	Alu	AluSz
CAediting_1245481	chr17_81255896_-	SINE	Alu	AluSz
CAediting_1245482	chr17_81255899_-	SINE	Alu	AluSz
CAediting_1245483	chr17_81255905_-	SINE	Alu	AluSz
CAediting_1245484	chr17_81255906_-	SINE	Alu	AluSz
CAediting_1245485	chr17_81255913_-	SINE	Alu	AluSz
CAediting_1245486	chr17_81255920_-	SINE	Alu	AluSz
CAediting_1245487	chr17_81255922_-	SINE	Alu	AluSz
CAediting_1245488	chr17_81255925_-	SINE	Alu	AluSz
CAediting_1245489	chr17_81255956_-	SINE	Alu	AluSz
CAediting_1245490	chr17_81257155_-	SINE	Alu	AluJb
CAediting_1245491	chr17_81257180_-	SINE	Alu	AluJb
CAediting_1245492	chr17_81257196_-	SINE	Alu	AluJb
CAediting_1245493	chr17_81257217_-	SINE	Alu	AluJb
CAediting_1245494	chr17_81257260_-	SINE	Alu	AluJb
CAediting_1245495	chr17_81257269_-	SINE	Alu	AluJb
CAediting_1245496	chr17_81257271_-	SINE	Alu	AluJb
CAediting_1245497	chr17_81257272_-	SINE	Alu	AluJb
CAediting_1245498	chr17_81257273_-	SINE	Alu	AluJb
CAediting_1245499	chr17_81257289_-	SINE	Alu	AluJb
CAediting_1245500	chr17_81257299_-	SINE	Alu	AluJb
CAediting_1245501	chr17_81257333_-	SINE	Alu	AluJb
CAediting_1245502	chr17_81257342_-	SINE	Alu	AluJb
CAediting_1245503	chr17_81257347_-	SINE	Alu	AluJb
CAediting_1245504	chr17_81257363_-	SINE	Alu	AluJb
CAediting_1245505	chr17_81268466_-	SINE	Alu	AluSx
CAediting_1245506	chr17_81268469_-	SINE	Alu	AluSx
CAediting_1245507	chr17_81268502_-	SINE	Alu	AluSx
CAediting_1245508	chr17_81268503_-	SINE	Alu	AluSx
CAediting_1245509	chr17_81268508_-	SINE	Alu	AluSx
CAediting_1245510	chr17_81268544_-	SINE	Alu	AluSx
CAediting_1245511	chr17_81268552_-	SINE	Alu	AluSx
CAediting_1245512	chr17_81268562_-	SINE	Alu	AluSx
CAediting_1245513	chr17_81269239_-	SINE	Alu	AluSz
CAediting_1245514	chr17_81269427_-	SINE	Alu	AluSz
CAediting_1245515	chr17_81269431_-	SINE	Alu	AluSz
CAediting_1245516	chr17_81269882_-	SINE	Alu	AluSq
CAediting_1245517	chr17_81269888_-	SINE	Alu	AluSq
CAediting_1245518	chr17_81269959_-	SINE	Alu	AluSq
CAediting_1245519	chr17_81274961_-	SINE	Alu	AluJo
CAediting_1245520	chr17_81275044_-	SINE	Alu	AluJo
CAediting_1245521	chr17_81275057_-	SINE	Alu	AluJo
CAediting_1245522	chr17_81275066_-	SINE	Alu	AluJo
CAediting_1245523	chr17_81275070_-	SINE	Alu	AluJo
CAediting_1245524	chr17_81275073_-	SINE	Alu	AluJo
CAediting_1245525	chr17_81275074_-	SINE	Alu	AluJo
CAediting_1245526	chr17_81275085_-	SINE	Alu	AluJo
CAediting_1245527	chr17_81275263_-	SINE	Alu	AluJb
CAediting_1245528	chr17_81275324_-	SINE	Alu	AluJb
CAediting_1245529	chr17_81276454_-	SINE	Alu	AluSg
CAediting_1245530	chr17_81276520_-	SINE	Alu	AluSg
CAediting_1245531	chr17_81283666_-	SINE	Alu	AluY
CAediting_1245532	chr17_81283742_-	SINE	Alu	AluY
CAediting_1245533	chr17_81283746_-	SINE	Alu	AluY
CAediting_1245534	chr17_81283774_-	SINE	Alu	AluY
CAediting_1245535	chr17_81283790_-	SINE	Alu	AluY
CAediting_1245536	chr17_81283793_-	SINE	Alu	AluY
CAediting_1245537	chr17_81283838_-	SINE	Alu	AluY
CAediting_1245538	chr17_81283882_-	SINE	Alu	AluY
CAediting_1245539	chr17_81284275_-	SINE	Alu	AluSx

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RNA A-to-I editing events in the alternative splicing sites for SLC38A10

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000157637.11.SLC38A10.

Correlation between RNA A-to-I editing and PSI for ENSG00000157637.11.SLC38A10.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for SLC38A10

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for SLC38A10

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for SLC38A10

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_393	chr1_1167164_+	ENSG00000157637.11	ENST00000543204	hsa-miR-200b-3p	81280114	81280121	8mer-1a	81280114	81280133	164	-20.6
CAediting_573000	chr7_92204081_-	ENSG00000157637.11	ENST00000543204	hsa-miR-1285-5p	81279887	81279893	7mer-m8	81279886	81279905	145	-16.32

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for SLC38A10

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for SLC38A10

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
LGG	CAediting_1245408	chr17_81247569_-	0.015828182814734	0.318282162612781	.	.	.	.
LIHC	CAediting_1245408	chr17_81247569_-	0.000670290096917834	0.430277691883241	.	.	.	.
LUAD	CAediting_1245410	chr17_81247582_-	0.00388934099508889	0.367312849688094	.	.	.	.
BLCA	CAediting_1245421	chr17_81247729_-	0.0179186790922997	0.246358981888334	.	.	.	.
CESC	CAediting_1245421	chr17_81247729_-	0.0300746680188252	0.287577020741086	.	.	.	.
LUAD	CAediting_1245421	chr17_81247729_-	0.0261028672055991	0.161826937877803	.	.	.	.
STAD	CAediting_1245421	chr17_81247729_-	.	.	0.0387547654243813	0.21131971691152	.	.
THCA	CAediting_1245421	chr17_81247729_-	0.0104966700801711	0.251157800169657	.	.	.	.
KIRP	CAediting_1245421	chr17_81247729_-	0.0195213805585821	0.311306601828085	.	.	.	.
ESCA	CAediting_1245421	chr17_81247729_-	.	.	0.00531521819121429	0.318759944916366	.	.
BRCA	CAediting_1245430	chr17_81247835_-	0.0364669816696683	0.234279063532185	.	.	.	.
LUAD	CAediting_1245450	chr17_81248230_-	0.043705358476788	0.278181754072192	.	.	.	.
PCPG	CAediting_1245450	chr17_81248230_-	0.0307751518975513	0.272415952204454	.	.	.	.

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Relation with cancer stages for SLC38A10

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
BRCA	pathologic_stage	CAediting_1245450	chr17_81248230_-	0.0222055814768789	0.211293469920414
KIRP	clinical_stage	CAediting_1245421	chr17_81247729_-	0.0167648993844393	0.376104625340638
LUSC	pathologic_stage	CAediting_1245426	chr17_81247784_-	0.0333949607836698	0.266338560433381
STAD	pathologic_stage	CAediting_1245427	chr17_81247791_-	0.0242409942069076	0.24010895151828
THCA	pathologic_stage	CAediting_1245427	chr17_81247791_-	0.0253332866678831	0.288600575090415

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Relation with survival for SLC38A10

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for SLC38A10

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for SLC38A10

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene