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Editing gene: GINM1 (CAeditome ID:116254)

Gene summary for GINM1

Gene summary

Gene information	Gene symbol	GINM1
	Gene ID	116254
	Gene name	glycoprotein integral membrane 1
	Synonyms	C6orf72
	Cytomap	6q25.1
	Type of gene	protein-coding
	Description	glycoprotein integral membrane protein 1
	Modification date	20210518
	UniProtAcc	Q9NU53
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for GINM1

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000055211.11

RNA A-to-I editing events in Cancer.

CAediting_509215(149569590, +), CAediting_509216(149572701, +), CAediting_509217(149572755, +), CAediting_509218(149572779, +), CAediting_509219(149573230, +), CAediting_509220(149573260, +), CAediting_509221(149573671, +), CAediting_509222(149573688, +), CAediting_509223(149573724, +), CAediting_509224(149574640, +), CAediting_509225(149574656, +), CAediting_509226(149574658, +), CAediting_509227(149574777, +), CAediting_509228(149591039, +), CAediting_509229(149591040, +), CAediting_509230(149591045, +), CAediting_509231(149591056, +), CAediting_509232(149591075, +), CAediting_509233(149591103, +), CAediting_509234(149591113, +), CAediting_509235(149591124, +), CAediting_509236(149591127, +), CAediting_509237(149591128, +), CAediting_509238(149591134, +), CAediting_509239(149591137, +), CAediting_509240(149591138, +), CAediting_509241(149591141, +), CAediting_509242(149591142, +), CAediting_509243(149591145, +), CAediting_509244(149591177, +), CAediting_509245(149591181, +), CAediting_509246(149591213, +), CAediting_509247(149591233, +), CAediting_509248(149591242, +), CAediting_509249(149591274, +), CAediting_509250(149591276, +),

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RNA editing positional annotations for GINM1 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_509215	chr6_149569590_+	intronic
CAediting_509216	chr6_149572701_+	intronic
CAediting_509217	chr6_149572755_+	intronic
CAediting_509218	chr6_149572779_+	intronic
CAediting_509219	chr6_149573230_+	intronic
CAediting_509220	chr6_149573260_+	intronic
CAediting_509221	chr6_149573671_+	intronic
CAediting_509222	chr6_149573688_+	intronic
CAediting_509223	chr6_149573724_+	intronic
CAediting_509224	chr6_149574640_+	intronic
CAediting_509225	chr6_149574656_+	intronic
CAediting_509226	chr6_149574658_+	intronic
CAediting_509227	chr6_149574777_+	intronic
CAediting_509228	chr6_149591039_+	UTR3
CAediting_509229	chr6_149591040_+	UTR3
CAediting_509230	chr6_149591045_+	UTR3
CAediting_509231	chr6_149591056_+	UTR3
CAediting_509232	chr6_149591075_+	UTR3
CAediting_509233	chr6_149591103_+	UTR3
CAediting_509234	chr6_149591113_+	UTR3
CAediting_509235	chr6_149591124_+	UTR3
CAediting_509236	chr6_149591127_+	UTR3
CAediting_509237	chr6_149591128_+	UTR3
CAediting_509238	chr6_149591134_+	UTR3
CAediting_509239	chr6_149591137_+	UTR3
CAediting_509240	chr6_149591138_+	UTR3
CAediting_509241	chr6_149591141_+	UTR3
CAediting_509242	chr6_149591142_+	UTR3
CAediting_509243	chr6_149591145_+	UTR3
CAediting_509244	chr6_149591177_+	UTR3
CAediting_509245	chr6_149591181_+	UTR3
CAediting_509246	chr6_149591213_+	UTR3
CAediting_509247	chr6_149591233_+	UTR3
CAediting_509248	chr6_149591242_+	UTR3
CAediting_509249	chr6_149591274_+	UTR3
CAediting_509250	chr6_149591276_+	UTR3

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_509215	chr6_149569590_+	SINE	Alu	AluSx
CAediting_509216	chr6_149572701_+	SINE	Alu	AluSz6
CAediting_509217	chr6_149572755_+	SINE	Alu	AluSz6
CAediting_509218	chr6_149572779_+	SINE	Alu	AluSz6
CAediting_509219	chr6_149573230_+	SINE	Alu	AluSx
CAediting_509220	chr6_149573260_+	SINE	Alu	AluSx
CAediting_509221	chr6_149573671_+	SINE	Alu	AluJb
CAediting_509222	chr6_149573688_+	SINE	Alu	AluJb
CAediting_509223	chr6_149573724_+	SINE	Alu	AluJb
CAediting_509224	chr6_149574640_+	SINE	Alu	AluJb
CAediting_509225	chr6_149574656_+	SINE	Alu	AluJb
CAediting_509226	chr6_149574658_+	SINE	Alu	AluJb
CAediting_509227	chr6_149574777_+	SINE	Alu	AluJb
CAediting_509228	chr6_149591039_+	SINE	Alu	AluSc
CAediting_509229	chr6_149591040_+	SINE	Alu	AluSc
CAediting_509230	chr6_149591045_+	SINE	Alu	AluSc
CAediting_509231	chr6_149591056_+	SINE	Alu	AluSc
CAediting_509232	chr6_149591075_+	SINE	Alu	AluSc
CAediting_509233	chr6_149591103_+	SINE	Alu	AluSc
CAediting_509234	chr6_149591113_+	SINE	Alu	AluSc
CAediting_509235	chr6_149591124_+	SINE	Alu	AluSc
CAediting_509236	chr6_149591127_+	SINE	Alu	AluSc
CAediting_509237	chr6_149591128_+	SINE	Alu	AluSc
CAediting_509238	chr6_149591134_+	SINE	Alu	AluSc
CAediting_509239	chr6_149591137_+	SINE	Alu	AluSc
CAediting_509240	chr6_149591138_+	SINE	Alu	AluSc
CAediting_509241	chr6_149591141_+	SINE	Alu	AluSc
CAediting_509242	chr6_149591142_+	SINE	Alu	AluSc
CAediting_509243	chr6_149591145_+	SINE	Alu	AluSc
CAediting_509244	chr6_149591177_+	SINE	Alu	AluSc
CAediting_509245	chr6_149591181_+	SINE	Alu	AluSc
CAediting_509246	chr6_149591213_+	SINE	Alu	AluSc
CAediting_509247	chr6_149591233_+	SINE	Alu	AluSc
CAediting_509248	chr6_149591242_+	SINE	Alu	AluSc
CAediting_509249	chr6_149591274_+	SINE	Alu	AluSc
CAediting_509250	chr6_149591276_+	SINE	Alu	AluSc

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RNA A-to-I editing events in the alternative splicing sites for GINM1

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000055211.11.GINM1.

Correlation between RNA A-to-I editing and PSI for ENSG00000055211.11.GINM1.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for GINM1

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for GINM1

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for GINM1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_509228	chr6_149591039_+	ENSG00000055211.11	ENST00000367419	hsa-miR-513a-5p	149591033	149591039	7mer-m8	149591023	149591040	152.00	-17.32
CAediting_509228	chr6_149591039_+	ENSG00000055211.11	ENST00000367419	hsa-miR-513a-5p	149591033	149591039	7mer-m8	149591023	149591040	152.00	-17.32
CAediting_509228	chr6_149591039_+	ENSG00000055211.11	ENST00000367419	hsa-miR-638	149591038	149591044	7mer-1a	149591018	149591044	154.00	-31.53
CAediting_509229	chr6_149591040_+	ENSG00000055211.11	ENST00000367419	hsa-miR-8052	149591038	149591044	7mer-1a	149591026	149591044	148.00	-29.06
CAediting_509230	chr6_149591045_+	ENSG00000055211.11	ENST00000367419	hsa-miR-1247-3p	149591040	149591047	8mer-1a	149591017	149591047	146.00	-23.53
CAediting_509230	chr6_149591045_+	ENSG00000055211.11	ENST00000367419	hsa-miR-4449	149591042	149591048	7mer-m8	149591028	149591049	157.00	-28.92
CAediting_509232	chr6_149591075_+	ENSG00000055211.11	ENST00000367419	hsa-miR-10401-3p	149591074	149591079	6mer	149591061	149591080	145.00	-35.36
CAediting_509232	chr6_149591075_+	ENSG00000055211.11	ENST00000367419	hsa-miR-10401-3p	149591074	149591079	6mer	149591061	149591080	145.00	-35.36
CAediting_509232	chr6_149591075_+	ENSG00000055211.11	ENST00000367419	hsa-miR-10401-3p	149591074	149591079	6mer	149591061	149591080	145.00	-35.36
CAediting_509232	chr6_149591075_+	ENSG00000055211.11	ENST00000367419	hsa-miR-10401-3p	149591074	149591079	6mer	149591061	149591080	145.00	-35.36
CAediting_509234	chr6_149591113_+	ENSG00000055211.11	ENST00000367419	hsa-miR-3158-3p	149591110	149591116	7mer-m8	149591093	149591117	158.00	-25.28
CAediting_509234	chr6_149591113_+	ENSG00000055211.11	ENST00000367419	hsa-miR-3158-3p	149591110	149591116	7mer-m8	149591093	149591117	158.00	-25.28
CAediting_509234	chr6_149591113_+	ENSG00000055211.11	ENST00000367419	hsa-miR-412-3p	149591106	149591112	7mer-m8	149591091	149591113	144.00	-13.52
CAediting_509234	chr6_149591113_+	ENSG00000055211.11	ENST00000367419	hsa-miR-6754-3p	149591106	149591112	7mer-m8	149591091	149591113	141.00	-13.23
CAediting_509237	chr6_149591128_+	ENSG00000055211.11	ENST00000367419	hsa-miR-325	149591121	149591128	8mer-1a	149591106	149591128	141.00	-12.77
CAediting_509233	chr6_149591103_+	ENSG00000055211.11	ENST00000367419	hsa-miR-6868-5p	149591096	149591102	7mer-m8	149591082	149591103	142.00	-14.25
CAediting_509233	chr6_149591103_+	ENSG00000055211.11	ENST00000367419	hsa-miR-9851-5p	149591097	149591104	8mer-1a	149591084	149591104	158.00	-21.24
CAediting_509235	chr6_149591124_+	ENSG00000055211.11	ENST00000367419	hsa-miR-2467-3p	149591119	149591124	6mer	149591104	149591125	141.00	-23.27
CAediting_509235	chr6_149591124_+	ENSG00000055211.11	ENST00000367419	hsa-miR-374b-3p	149591121	149591128	8mer-1a	149591103	149591128	146.00	-14.59
CAediting_509236	chr6_149591127_+	ENSG00000055211.11	ENST00000367419	hsa-miR-222-5p	149591121	149591128	8mer-1a	149591105	149591128	146.00	-14.38
CAediting_509236	chr6_149591127_+	ENSG00000055211.11	ENST00000367419	hsa-miR-30a-3p	149591123	149591130	8mer-1a	149591106	149591130	150.00	-10.49
CAediting_509236	chr6_149591127_+	ENSG00000055211.11	ENST00000367419	hsa-miR-30d-3p	149591123	149591130	8mer-1a	149591105	149591130	147.00	-10.55
CAediting_509236	chr6_149591127_+	ENSG00000055211.11	ENST00000367419	hsa-miR-30e-3p	149591123	149591130	8mer-1a	149591106	149591130	150.00	-11.75
CAediting_509236	chr6_149591127_+	ENSG00000055211.11	ENST00000367419	hsa-miR-936	149591120	149591127	8mer-1a	149591105	149591127	159.00	-26.12
CAediting_509245	chr6_149591181_+	ENSG00000055211.11	ENST00000367419	hsa-miR-1207-3p	149591174	149591180	7mer-m8	149591163	149591181	145.00	-13.53
CAediting_509245	chr6_149591181_+	ENSG00000055211.11	ENST00000367419	hsa-miR-646	149591176	149591182	7mer-m8	149591164	149591183	148.00	-22.30
CAediting_509246	chr6_149591213_+	ENSG00000055211.11	ENST00000367419	hsa-miR-4437	149591209	149591215	7mer-m8	149591196	149591216	146.00	-19.53
CAediting_509247	chr6_149591233_+	ENSG00000055211.11	ENST00000367419	hsa-miR-6511a-3p	149591232	149591237	6mer	149591217	149591238	140.00	-25.39
CAediting_509247	chr6_149591233_+	ENSG00000055211.11	ENST00000367419	hsa-miR-6511a-3p	149591232	149591237	6mer	149591217	149591238	140.00	-25.39
CAediting_509247	chr6_149591233_+	ENSG00000055211.11	ENST00000367419	hsa-miR-6511a-3p	149591232	149591237	6mer	149591217	149591238	140.00	-25.39
CAediting_509247	chr6_149591233_+	ENSG00000055211.11	ENST00000367419	hsa-miR-6511a-3p	149591232	149591237	6mer	149591217	149591238	140.00	-25.39
CAediting_509247	chr6_149591233_+	ENSG00000055211.11	ENST00000367419	hsa-miR-6511b-3p	149591232	149591237	6mer	149591216	149591238	144.00	-29.64
CAediting_509247	chr6_149591233_+	ENSG00000055211.11	ENST00000367419	hsa-miR-6511b-3p	149591232	149591237	6mer	149591216	149591238	144.00	-29.64
CAediting_509248	chr6_149591242_+	ENSG00000055211.11	ENST00000367419	hsa-miR-149-5p	149591235	149591241	7mer-m8	149591217	149591242	149.00	-30.20
CAediting_509239	chr6_149591137_+	ENSG00000055211.11	ENST00000367419	hsa-miR-4482-3p	149591132	149591139	8mer-1a	149591116	149591139	158.00	-16.19
CAediting_509250	chr6_149591276_+	ENSG00000055211.11	ENST00000367419	hsa-miR-339-5p	149591270	149591276	7mer-m8	149591255	149591277	163.00	-27.89
CAediting_509250	chr6_149591276_+	ENSG00000055211.11	ENST00000367419	hsa-miR-6726-3p	149591273	149591279	7mer-m8	149591259	149591280	169.00	-33.86

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_509228	chr6_149591039_+	ENSG00000055211.11	ENST00000367419	hsa-miR-10399-5p	149591034	149591040	7mer-m8	149591020	149591041	144	-10.52
CAediting_509229	chr6_149591040_+	ENSG00000055211.11	ENST00000367419	hsa-miR-10399-5p	149591034	149591040	7mer-m8	149591020	149591041	144	-10.52
CAediting_509247	chr6_149591233_+	ENSG00000055211.11	ENST00000367419	hsa-miR-1184	149591227	149591233	7mer-m8	149591212	149591234	140	-20.87
CAediting_509247	chr6_149591233_+	ENSG00000055211.11	ENST00000367419	hsa-miR-1184	149591227	149591233	7mer-m8	149591212	149591234	140	-20.87
CAediting_509247	chr6_149591233_+	ENSG00000055211.11	ENST00000367419	hsa-miR-1184	149591227	149591233	7mer-m8	149591212	149591234	140	-20.87
CAediting_509230	chr6_149591045_+	ENSG00000055211.11	ENST00000367419	hsa-miR-1343-3p	149591041	149591047	7mer-m8	149591027	149591048	141	-16.23
CAediting_509231	chr6_149591056_+	ENSG00000055211.11	ENST00000367419	hsa-miR-150-5p	149591050	149591056	7mer-m8	149591034	149591057	143	-16.8
CAediting_509247	chr6_149591233_+	ENSG00000055211.11	ENST00000367419	hsa-miR-4418	149591228	149591234	7mer-m8	149591219	149591235	150	-22.02
CAediting_509233	chr6_149591103_+	ENSG00000055211.11	ENST00000367419	hsa-miR-4716-5p	149591101	149591107	7mer-m8	149591087	149591108	140	-9.36
CAediting_509244	chr6_149591177_+	ENSG00000055211.11	ENST00000367419	hsa-miR-4731-5p	149591173	149591178	6mer	149591159	149591179	146	-23.15
CAediting_509241	chr6_149591141_+	ENSG00000055211.11	ENST00000367419	hsa-miR-4735-5p	149591139	149591145	7mer-m8	149591125	149591146	140	-4.28
CAediting_509242	chr6_149591142_+	ENSG00000055211.11	ENST00000367419	hsa-miR-4735-5p	149591139	149591145	7mer-m8	149591125	149591146	140	-4.28
CAediting_509243	chr6_149591145_+	ENSG00000055211.11	ENST00000367419	hsa-miR-4735-5p	149591139	149591145	7mer-m8	149591125	149591146	140	-4.28
CAediting_509233	chr6_149591103_+	ENSG00000055211.11	ENST00000367419	hsa-miR-4781-3p	149591099	149591105	7mer-m8	149591084	149591106	143	-11.01
CAediting_509246	chr6_149591213_+	ENSG00000055211.11	ENST00000367419	hsa-miR-498-5p	149591206	149591212	7mer-m8	149591191	149591213	142	-10.65
CAediting_509229	chr6_149591040_+	ENSG00000055211.11	ENST00000367419	hsa-miR-5089-5p	149591038	149591044	7mer-m8	149591026	149591045	146	-13.24
CAediting_509230	chr6_149591045_+	ENSG00000055211.11	ENST00000367419	hsa-miR-5089-5p	149591038	149591044	7mer-m8	149591026	149591045	146	-13.24
CAediting_509247	chr6_149591233_+	ENSG00000055211.11	ENST00000367419	hsa-miR-509-3-5p	149591228	149591234	7mer-m8	149591214	149591235	147	-21.33
CAediting_509247	chr6_149591233_+	ENSG00000055211.11	ENST00000367419	hsa-miR-509-5p	149591228	149591234	7mer-m8	149591215	149591235	144	-19.29
CAediting_509247	chr6_149591233_+	ENSG00000055211.11	ENST00000367419	hsa-miR-509-5p	149591228	149591234	7mer-m8	149591215	149591235	144	-19.29
CAediting_509245	chr6_149591181_+	ENSG00000055211.11	ENST00000367419	hsa-miR-562	149591177	149591183	7mer-m8	149591164	149591184	151	-14.2
CAediting_509245	chr6_149591181_+	ENSG00000055211.11	ENST00000367419	hsa-miR-5697	149591178	149591184	7mer-m8	149591164	149591185	146	-18.01
CAediting_509230	chr6_149591045_+	ENSG00000055211.11	ENST00000367419	hsa-miR-6506-5p	149591039	149591045	7mer-m8	149591024	149591046	144	-16.13
CAediting_509249	chr6_149591274_+	ENSG00000055211.11	ENST00000367419	hsa-miR-6773-3p	149591268	149591275	8mer-1a	149591254	149591275	142	-15.63
CAediting_509231	chr6_149591056_+	ENSG00000055211.11	ENST00000367419	hsa-miR-6778-3p	149591052	149591058	7mer-m8	149591041	149591059	146	-17.22
CAediting_509230	chr6_149591045_+	ENSG00000055211.11	ENST00000367419	hsa-miR-6783-3p	149591041	149591047	7mer-m8	149591027	149591048	147	-13.34
CAediting_509234	chr6_149591113_+	ENSG00000055211.11	ENST00000367419	hsa-miR-6823-5p	149591111	149591117	7mer-m8	149591098	149591118	143	-17.07
CAediting_509235	chr6_149591124_+	ENSG00000055211.11	ENST00000367419	hsa-miR-6832-5p	149591118	149591124	7mer-m8	149591103	149591125	140	-18.87
CAediting_509230	chr6_149591045_+	ENSG00000055211.11	ENST00000367419	hsa-miR-6838-3p	149591043	149591049	7mer-m8	149591031	149591050	140	-18.35
CAediting_509231	chr6_149591056_+	ENSG00000055211.11	ENST00000367419	hsa-miR-6878-3p	149591054	149591061	8mer-1a	149591042	149591061	145	-18.14
CAediting_509228	chr6_149591039_+	ENSG00000055211.11	ENST00000367419	hsa-miR-7151-3p	149591032	149591039	8mer-1a	149591023	149591039	146	-17.62
CAediting_509247	chr6_149591233_+	ENSG00000055211.11	ENST00000367419	hsa-miR-7156-3p	149591226	149591232	7mer-m8	149591211	149591233	143	-24.11

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_980496	chr14_31014685_-	ENSG00000055211.11	ENST00000367419	hsa-miR-624-3p	149591112	149591118	7mer-m8	149591099	149591119	152	-13.11
CAediting_228905	chr2_188297554_+	ENSG00000055211.11	ENST00000367419	hsa-miR-561-3p	149590950	149590957	8mer-1a	149590934	149590957	150	-9.09

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_442554	chr5_154685830_+	ENSG00000055211.11	ENST00000367419	hsa-miR-1303	149591314	149591321	8mer-1a	149591299	149591321	150	-17.72
CAediting_228905	chr2_188297554_+	ENSG00000055211.11	ENST00000367419	hsa-miR-561-3p	149591717	149591723	7mer-m8	149591703	149591724	145	-5.13

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for GINM1

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000367419.8	protein_coding

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_509228	ENST00000367419.8	chr6_149591039_+	-558.90	-557.80	-581.40
CAediting_509229	ENST00000367419.8	chr6_149591040_+	-557.80	-557.80	-581.40
CAediting_509230	ENST00000367419.8	chr6_149591045_+	-559.70	-557.80	-581.40
CAediting_509231	ENST00000367419.8	chr6_149591056_+	-556.70	-557.80	-581.40
CAediting_509232	ENST00000367419.8	chr6_149591075_+	-557.80	-557.80	-581.40
CAediting_509233	ENST00000367419.8	chr6_149591103_+	-560.00	-557.80	-581.40
CAediting_509234	ENST00000367419.8	chr6_149591113_+	-558.00	-557.80	-581.40
CAediting_509235	ENST00000367419.8	chr6_149591124_+	-557.90	-557.80	-581.40
CAediting_509236	ENST00000367419.8	chr6_149591127_+	-557.80	-557.80	-581.40
CAediting_509237	ENST00000367419.8	chr6_149591128_+	-557.80	-557.80	-581.40
CAediting_509238	ENST00000367419.8	chr6_149591134_+	-558.60	-557.80	-581.40
CAediting_509239	ENST00000367419.8	chr6_149591137_+	-557.80	-557.80	-581.40
CAediting_509240	ENST00000367419.8	chr6_149591138_+	-557.80	-557.80	-581.40
CAediting_509241	ENST00000367419.8	chr6_149591141_+	-557.90	-557.80	-581.40
CAediting_509242	ENST00000367419.8	chr6_149591142_+	-559.60	-557.80	-581.40
CAediting_509243	ENST00000367419.8	chr6_149591145_+	-557.50	-557.80	-581.40
CAediting_509244	ENST00000367419.8	chr6_149591177_+	-557.10	-557.80	-581.40
CAediting_509245	ENST00000367419.8	chr6_149591181_+	-557.50	-557.80	-581.40
CAediting_509246	ENST00000367419.8	chr6_149591213_+	-558.80	-557.80	-581.40
CAediting_509247	ENST00000367419.8	chr6_149591233_+	-557.90	-557.80	-581.40
CAediting_509248	ENST00000367419.8	chr6_149591242_+	-557.80	-557.80	-581.40
CAediting_509249	ENST00000367419.8	chr6_149591274_+	-559.90	-557.80	-581.40
CAediting_509250	ENST00000367419.8	chr6_149591276_+	-562.30	-557.80	-581.40

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Relation with ADAR for GINM1

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
GBM	CAediting_509248	chr6_149591242_+	0.0364918146787286	0.277691624078551	.	.	.	.

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Relation with cancer stages for GINM1

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for GINM1

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for GINM1

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for GINM1

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene