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Editing gene: MALSU1 (CAeditome ID:115416)

Gene summary for MALSU1

Gene summary

Gene information	Gene symbol	MALSU1
	Gene ID	115416
	Gene name	mitochondrial assembly of ribosomal large subunit 1
	Synonyms	C7orf30\|mtRsfA
	Cytomap	7p15.3
	Type of gene	protein-coding
	Description	mitochondrial assembly of ribosomal large subunit protein 1
	Modification date	20210518
	UniProtAcc	Q96EH3
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
MALSU1	GO:0070130	Mitochondrial assembly of ribosomal large subunit protein 1	22829778
MALSU1	GO:0005739	Mitochondrial assembly of ribosomal large subunit protein 1	0000052
MALSU1	GO:0005739	Mitochondrial assembly of ribosomal large subunit protein 1	16548050
MALSU1	GO:0005739	Mitochondrial assembly of ribosomal large subunit protein 1	22238376
MALSU1	GO:0005829	Mitochondrial assembly of ribosomal large subunit protein 1	0000052

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RNA A-to-I events for MALSU1

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000156928.4

RNA A-to-I editing events in Cancer.

CAediting_531474(23301390, +), CAediting_531475(23301440, +), CAediting_531476(23301443, +), CAediting_531477(23301511, +), CAediting_531478(23301521, +), CAediting_531479(23301533, +), CAediting_531480(23301848, +), CAediting_531481(23301858, +), CAediting_531482(23302846, +), CAediting_531483(23302851, +), CAediting_531484(23302856, +), CAediting_531485(23302906, +), CAediting_531486(23302957, +), CAediting_531487(23302960, +), CAediting_531488(23303024, +), CAediting_531489(23303036, +), CAediting_531490(23303042, +), CAediting_531491(23303541, +), CAediting_531492(23303542, +), CAediting_531493(23303563, +), CAediting_531494(23303597, +), CAediting_531495(23303689, +), CAediting_531496(23303706, +), CAediting_531497(23303712, +), CAediting_531498(23303729, +), CAediting_531499(23303734, +), CAediting_531500(23303750, +), CAediting_531501(23303758, +), CAediting_531502(23303759, +), CAediting_531503(23303774, +), CAediting_531504(23303796, +), CAediting_531505(23303797, +), CAediting_531506(23303850, +), CAediting_531507(23303851, +), CAediting_531508(23303872, +), CAediting_531509(23303896, +), CAediting_531510(23303904, +), CAediting_531511(23303905, +), CAediting_531512(23303920, +), CAediting_531513(23303921, +), CAediting_531514(23303922, +), CAediting_531515(23303930, +), CAediting_531516(23303944, +), CAediting_531517(23303947, +), CAediting_531518(23303948, +), CAediting_531519(23303950, +), CAediting_531520(23303955, +), CAediting_531521(23303959, +), CAediting_531522(23303985, +), CAediting_531523(23303986, +), CAediting_531524(23303991, +), CAediting_531525(23303995, +), CAediting_531526(23304002, +), CAediting_531527(23304515, +), CAediting_531528(23304516, +), CAediting_531529(23304517, +), CAediting_531530(23304519, +), CAediting_531531(23304523, +), CAediting_531532(23304574, +), CAediting_531533(23304600, +), CAediting_531534(23304612, +), CAediting_531535(23304617, +), CAediting_531536(23304633, +), CAediting_531537(23304639, +), CAediting_531538(23304653, +), CAediting_531539(23304659, +), CAediting_531540(23304700, +), CAediting_531541(23304711, +), CAediting_531542(23304723, +), CAediting_531543(23304725, +), CAediting_531544(23305436, +), CAediting_531545(23305443, +), CAediting_531546(23305448, +), CAediting_531547(23305454, +), CAediting_531548(23305476, +), CAediting_531549(23305479, +), CAediting_531550(23305502, +), CAediting_531551(23305505, +), CAediting_531552(23305515, +), CAediting_531553(23305551, +), CAediting_531554(23305597, +), CAediting_531555(23305598, +), CAediting_531556(23305599, +), CAediting_531557(23305651, +), CAediting_531558(23305653, +), CAediting_531559(23305921, +), CAediting_531560(23305939, +), CAediting_531561(23305940, +), CAediting_531562(23305970, +), CAediting_531563(23305993, +), CAediting_531564(23305994, +), CAediting_531565(23305999, +), CAediting_531566(23306008, +), CAediting_531567(23306018, +), CAediting_531568(23306030, +), CAediting_531569(23306036, +), CAediting_531570(23306037, +), CAediting_531571(23306039, +), CAediting_531572(23306042, +), CAediting_531573(23306047, +), CAediting_531574(23306065, +), CAediting_531575(23306073, +), CAediting_531576(23306106, +), CAediting_531577(23306146, +), CAediting_531578(23306157, +), CAediting_531579(23306159, +), CAediting_531580(23306164, +), CAediting_531581(23308933, +),

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RNA editing positional annotations for MALSU1 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_531474	chr7_23301390_+	ncRNA_intronic
CAediting_531475	chr7_23301440_+	ncRNA_intronic
CAediting_531476	chr7_23301443_+	ncRNA_intronic
CAediting_531477	chr7_23301511_+	ncRNA_intronic
CAediting_531478	chr7_23301521_+	ncRNA_intronic
CAediting_531479	chr7_23301533_+	ncRNA_intronic
CAediting_531480	chr7_23301848_+	ncRNA_intronic
CAediting_531481	chr7_23301858_+	ncRNA_intronic
CAediting_531482	chr7_23302846_+	ncRNA_intronic
CAediting_531483	chr7_23302851_+	ncRNA_intronic
CAediting_531484	chr7_23302856_+	ncRNA_intronic
CAediting_531485	chr7_23302906_+	ncRNA_intronic
CAediting_531486	chr7_23302957_+	ncRNA_intronic
CAediting_531487	chr7_23302960_+	ncRNA_intronic
CAediting_531488	chr7_23303024_+	ncRNA_intronic
CAediting_531489	chr7_23303036_+	ncRNA_intronic
CAediting_531490	chr7_23303042_+	ncRNA_intronic
CAediting_531491	chr7_23303541_+	ncRNA_intronic
CAediting_531492	chr7_23303542_+	ncRNA_intronic
CAediting_531493	chr7_23303563_+	ncRNA_intronic
CAediting_531494	chr7_23303597_+	ncRNA_intronic
CAediting_531495	chr7_23303689_+	ncRNA_intronic
CAediting_531496	chr7_23303706_+	ncRNA_intronic
CAediting_531497	chr7_23303712_+	ncRNA_intronic
CAediting_531498	chr7_23303729_+	ncRNA_intronic
CAediting_531499	chr7_23303734_+	ncRNA_intronic
CAediting_531500	chr7_23303750_+	ncRNA_intronic
CAediting_531501	chr7_23303758_+	ncRNA_intronic
CAediting_531502	chr7_23303759_+	ncRNA_intronic
CAediting_531503	chr7_23303774_+	ncRNA_intronic
CAediting_531504	chr7_23303796_+	ncRNA_intronic
CAediting_531505	chr7_23303797_+	ncRNA_intronic
CAediting_531506	chr7_23303850_+	ncRNA_intronic
CAediting_531507	chr7_23303851_+	ncRNA_intronic
CAediting_531508	chr7_23303872_+	ncRNA_intronic
CAediting_531509	chr7_23303896_+	ncRNA_intronic
CAediting_531510	chr7_23303904_+	ncRNA_intronic
CAediting_531511	chr7_23303905_+	ncRNA_intronic
CAediting_531512	chr7_23303920_+	ncRNA_intronic
CAediting_531513	chr7_23303921_+	ncRNA_intronic
CAediting_531514	chr7_23303922_+	ncRNA_intronic
CAediting_531515	chr7_23303930_+	ncRNA_intronic
CAediting_531516	chr7_23303944_+	ncRNA_intronic
CAediting_531517	chr7_23303947_+	ncRNA_intronic
CAediting_531518	chr7_23303948_+	ncRNA_intronic
CAediting_531519	chr7_23303950_+	ncRNA_intronic
CAediting_531520	chr7_23303955_+	ncRNA_intronic
CAediting_531521	chr7_23303959_+	ncRNA_intronic
CAediting_531522	chr7_23303985_+	ncRNA_intronic
CAediting_531523	chr7_23303986_+	ncRNA_intronic
CAediting_531524	chr7_23303991_+	ncRNA_intronic
CAediting_531525	chr7_23303995_+	ncRNA_intronic
CAediting_531526	chr7_23304002_+	ncRNA_intronic
CAediting_531527	chr7_23304515_+	ncRNA_intronic
CAediting_531528	chr7_23304516_+	ncRNA_intronic
CAediting_531529	chr7_23304517_+	ncRNA_intronic
CAediting_531530	chr7_23304519_+	ncRNA_intronic
CAediting_531531	chr7_23304523_+	ncRNA_intronic
CAediting_531532	chr7_23304574_+	ncRNA_intronic
CAediting_531533	chr7_23304600_+	ncRNA_intronic
CAediting_531534	chr7_23304612_+	ncRNA_intronic
CAediting_531535	chr7_23304617_+	ncRNA_intronic
CAediting_531536	chr7_23304633_+	ncRNA_intronic
CAediting_531537	chr7_23304639_+	ncRNA_intronic
CAediting_531538	chr7_23304653_+	ncRNA_intronic
CAediting_531539	chr7_23304659_+	ncRNA_intronic
CAediting_531540	chr7_23304700_+	ncRNA_intronic
CAediting_531541	chr7_23304711_+	ncRNA_intronic
CAediting_531542	chr7_23304723_+	ncRNA_intronic
CAediting_531543	chr7_23304725_+	ncRNA_intronic
CAediting_531544	chr7_23305436_+	ncRNA_intronic
CAediting_531545	chr7_23305443_+	ncRNA_intronic
CAediting_531546	chr7_23305448_+	ncRNA_intronic
CAediting_531547	chr7_23305454_+	ncRNA_intronic
CAediting_531548	chr7_23305476_+	ncRNA_intronic
CAediting_531549	chr7_23305479_+	ncRNA_intronic
CAediting_531550	chr7_23305502_+	ncRNA_intronic
CAediting_531551	chr7_23305505_+	ncRNA_intronic
CAediting_531552	chr7_23305515_+	ncRNA_intronic
CAediting_531553	chr7_23305551_+	ncRNA_intronic
CAediting_531554	chr7_23305597_+	ncRNA_intronic
CAediting_531555	chr7_23305598_+	ncRNA_intronic
CAediting_531556	chr7_23305599_+	ncRNA_intronic
CAediting_531557	chr7_23305651_+	ncRNA_intronic
CAediting_531558	chr7_23305653_+	ncRNA_intronic
CAediting_531559	chr7_23305921_+	ncRNA_intronic
CAediting_531560	chr7_23305939_+	ncRNA_intronic
CAediting_531561	chr7_23305940_+	ncRNA_intronic
CAediting_531562	chr7_23305970_+	ncRNA_intronic
CAediting_531563	chr7_23305993_+	ncRNA_intronic
CAediting_531564	chr7_23305994_+	ncRNA_intronic
CAediting_531565	chr7_23305999_+	ncRNA_intronic
CAediting_531566	chr7_23306008_+	ncRNA_intronic
CAediting_531567	chr7_23306018_+	ncRNA_intronic
CAediting_531568	chr7_23306030_+	ncRNA_intronic
CAediting_531569	chr7_23306036_+	ncRNA_intronic
CAediting_531570	chr7_23306037_+	ncRNA_intronic
CAediting_531571	chr7_23306039_+	ncRNA_intronic
CAediting_531572	chr7_23306042_+	ncRNA_intronic
CAediting_531573	chr7_23306047_+	ncRNA_intronic
CAediting_531574	chr7_23306065_+	ncRNA_intronic
CAediting_531575	chr7_23306073_+	ncRNA_intronic
CAediting_531576	chr7_23306106_+	ncRNA_intronic
CAediting_531577	chr7_23306146_+	ncRNA_intronic
CAediting_531578	chr7_23306157_+	ncRNA_intronic
CAediting_531579	chr7_23306159_+	ncRNA_intronic
CAediting_531580	chr7_23306164_+	ncRNA_intronic
CAediting_531581	chr7_23308933_+	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_531474	chr7_23301390_+	SINE	Alu	AluSp
CAediting_531475	chr7_23301440_+	SINE	Alu	AluSp
CAediting_531476	chr7_23301443_+	SINE	Alu	AluSp
CAediting_531477	chr7_23301511_+	SINE	Alu	AluSp
CAediting_531478	chr7_23301521_+	SINE	Alu	AluSp
CAediting_531479	chr7_23301533_+	SINE	Alu	AluSp
CAediting_531480	chr7_23301848_+	SINE	Alu	AluSc
CAediting_531481	chr7_23301858_+	SINE	Alu	AluSc
CAediting_531482	chr7_23302846_+	SINE	Alu	AluSx1
CAediting_531483	chr7_23302851_+	SINE	Alu	AluSx1
CAediting_531484	chr7_23302856_+	SINE	Alu	AluSx1
CAediting_531485	chr7_23302906_+	SINE	Alu	AluSx1
CAediting_531486	chr7_23302957_+	SINE	Alu	AluSx1
CAediting_531487	chr7_23302960_+	SINE	Alu	AluSx1
CAediting_531488	chr7_23303024_+	SINE	Alu	AluSx1
CAediting_531489	chr7_23303036_+	SINE	Alu	AluSx1
CAediting_531490	chr7_23303042_+	SINE	Alu	AluSx1
CAediting_531491	chr7_23303541_+	SINE	Alu	AluJb
CAediting_531492	chr7_23303542_+	SINE	Alu	AluJb
CAediting_531493	chr7_23303563_+	SINE	Alu	AluJb
CAediting_531494	chr7_23303597_+	SINE	Alu	AluJb
CAediting_531495	chr7_23303689_+	SINE	Alu	AluJb
CAediting_531496	chr7_23303706_+	SINE	Alu	AluJb
CAediting_531497	chr7_23303712_+	SINE	Alu	AluJb
CAediting_531498	chr7_23303729_+	SINE	Alu	AluJb
CAediting_531499	chr7_23303734_+	SINE	Alu	AluJb
CAediting_531500	chr7_23303750_+	SINE	Alu	AluJb
CAediting_531501	chr7_23303758_+	SINE	Alu	AluJb
CAediting_531502	chr7_23303759_+	SINE	Alu	AluJb
CAediting_531503	chr7_23303774_+	SINE	Alu	AluJb
CAediting_531504	chr7_23303796_+	SINE	Alu	AluJb
CAediting_531505	chr7_23303797_+	SINE	Alu	AluJb
CAediting_531506	chr7_23303850_+	SINE	Alu	AluSq
CAediting_531507	chr7_23303851_+	SINE	Alu	AluSq
CAediting_531508	chr7_23303872_+	SINE	Alu	AluSq
CAediting_531509	chr7_23303896_+	SINE	Alu	AluSq
CAediting_531510	chr7_23303904_+	SINE	Alu	AluSq
CAediting_531511	chr7_23303905_+	SINE	Alu	AluSq
CAediting_531512	chr7_23303920_+	SINE	Alu	AluSq
CAediting_531513	chr7_23303921_+	SINE	Alu	AluSq
CAediting_531514	chr7_23303922_+	SINE	Alu	AluSq
CAediting_531515	chr7_23303930_+	SINE	Alu	AluSq
CAediting_531516	chr7_23303944_+	SINE	Alu	AluSq
CAediting_531517	chr7_23303947_+	SINE	Alu	AluSq
CAediting_531518	chr7_23303948_+	SINE	Alu	AluSq
CAediting_531519	chr7_23303950_+	SINE	Alu	AluSq
CAediting_531520	chr7_23303955_+	SINE	Alu	AluSq
CAediting_531521	chr7_23303959_+	SINE	Alu	AluSq
CAediting_531522	chr7_23303985_+	SINE	Alu	AluSq
CAediting_531523	chr7_23303986_+	SINE	Alu	AluSq
CAediting_531524	chr7_23303991_+	SINE	Alu	AluSq
CAediting_531525	chr7_23303995_+	SINE	Alu	AluSq
CAediting_531526	chr7_23304002_+	SINE	Alu	AluSq
CAediting_531527	chr7_23304515_+	SINE	Alu	AluJb
CAediting_531528	chr7_23304516_+	SINE	Alu	AluJb
CAediting_531529	chr7_23304517_+	SINE	Alu	AluJb
CAediting_531530	chr7_23304519_+	SINE	Alu	AluJb
CAediting_531531	chr7_23304523_+	SINE	Alu	AluJb
CAediting_531532	chr7_23304574_+	SINE	Alu	AluJb
CAediting_531533	chr7_23304600_+	SINE	Alu	AluJb
CAediting_531534	chr7_23304612_+	SINE	Alu	AluJb
CAediting_531535	chr7_23304617_+	SINE	Alu	AluJb
CAediting_531536	chr7_23304633_+	SINE	Alu	AluJb
CAediting_531537	chr7_23304639_+	SINE	Alu	AluJb
CAediting_531538	chr7_23304653_+	LINE	L1	L1MB3
CAediting_531539	chr7_23304659_+	LINE	L1	L1MB3
CAediting_531540	chr7_23304700_+	SINE	Alu	AluJb
CAediting_531541	chr7_23304711_+	SINE	Alu	AluJb
CAediting_531542	chr7_23304723_+	SINE	Alu	AluJb
CAediting_531543	chr7_23304725_+	SINE	Alu	AluJb
CAediting_531544	chr7_23305436_+	SINE	Alu	AluSq
CAediting_531545	chr7_23305443_+	SINE	Alu	AluSq
CAediting_531546	chr7_23305448_+	SINE	Alu	AluSq
CAediting_531547	chr7_23305454_+	SINE	Alu	AluSq
CAediting_531548	chr7_23305476_+	SINE	Alu	AluSq
CAediting_531549	chr7_23305479_+	SINE	Alu	AluSq
CAediting_531550	chr7_23305502_+	SINE	Alu	AluSq
CAediting_531551	chr7_23305505_+	SINE	Alu	AluSq
CAediting_531552	chr7_23305515_+	SINE	Alu	AluSq
CAediting_531553	chr7_23305551_+	SINE	Alu	AluSq
CAediting_531554	chr7_23305597_+	SINE	Alu	AluSq
CAediting_531555	chr7_23305598_+	SINE	Alu	AluSq
CAediting_531556	chr7_23305599_+	SINE	Alu	AluSq
CAediting_531557	chr7_23305651_+	SINE	Alu	AluSq
CAediting_531558	chr7_23305653_+	SINE	Alu	AluSq
CAediting_531559	chr7_23305921_+	SINE	Alu	AluSp
CAediting_531560	chr7_23305939_+	SINE	Alu	AluSp
CAediting_531561	chr7_23305940_+	SINE	Alu	AluSp
CAediting_531562	chr7_23305970_+	SINE	Alu	AluSp
CAediting_531563	chr7_23305993_+	SINE	Alu	AluSp
CAediting_531564	chr7_23305994_+	SINE	Alu	AluSp
CAediting_531565	chr7_23305999_+	SINE	Alu	AluSp
CAediting_531566	chr7_23306008_+	SINE	Alu	AluSp
CAediting_531567	chr7_23306018_+	SINE	Alu	AluSp
CAediting_531568	chr7_23306030_+	SINE	Alu	AluSp
CAediting_531569	chr7_23306036_+	SINE	Alu	AluSp
CAediting_531570	chr7_23306037_+	SINE	Alu	AluSp
CAediting_531571	chr7_23306039_+	SINE	Alu	AluSp
CAediting_531572	chr7_23306042_+	SINE	Alu	AluSp
CAediting_531573	chr7_23306047_+	SINE	Alu	AluSp
CAediting_531574	chr7_23306065_+	SINE	Alu	AluSp
CAediting_531575	chr7_23306073_+	SINE	Alu	AluSp
CAediting_531576	chr7_23306106_+	SINE	Alu	AluSp
CAediting_531577	chr7_23306146_+	SINE	Alu	AluSp
CAediting_531578	chr7_23306157_+	SINE	Alu	AluSp
CAediting_531579	chr7_23306159_+	SINE	Alu	AluSp
CAediting_531580	chr7_23306164_+	SINE	Alu	AluSp
CAediting_531581	chr7_23308933_+	LTR	ERVL	LTR40a

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RNA A-to-I editing events in the alternative splicing sites for MALSU1

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000156928.4.MALSU1.

Correlation between RNA A-to-I editing and PSI for ENSG00000156928.4.MALSU1.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for MALSU1

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for MALSU1

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for MALSU1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_980496	chr14_31014685_-	ENSG00000156928.4	ENST00000466681	hsa-miR-624-3p	23309871	23309877	7mer-m8	23309859	23309878	153	-15.12
CAediting_1229414	chr17_67471546_+	ENSG00000156928.4	ENST00000466681	hsa-miR-548aa	23309930	23309937	8mer-1a	23309913	23309937	140	-9.52
CAediting_1399425	chr20_1392958_-	ENSG00000156928.4	ENST00000466681	hsa-miR-6869-5p	23309737	23309744	8mer-1a	23309723	23309744	140	-14.84
CAediting_228905	chr2_188297554_+	ENSG00000156928.4	ENST00000466681	hsa-miR-561-3p	23310039	23310045	7mer-m8	23310025	23310046	140	-14.69
CAediting_1524209	chrX_134546392_-	ENSG00000156928.4	ENST00000466681	hsa-miR-503-5p	23309756	23309762	7mer-m8	23309739	23309763	155	-18.16

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_86358	chr1_109598906_+	ENSG00000156928.4	ENST00000466681	hsa-miR-197-5p	23309736	23309743	8mer-1a	23309721	23309743	148	-14.88
CAediting_1306324	chr19_13836464_-	ENSG00000156928.4	ENST00000466681	hsa-miR-27a-3p	23310838	23310844	7mer-m8	23310828	23310845	143	-12.08
CAediting_1368054	chr19_46709310_-	ENSG00000156928.4	ENST00000466681	hsa-miR-320e	23311623	23311629	7mer-m8	23311613	23311630	141	-12.69
CAediting_1524209	chrX_134546392_-	ENSG00000156928.4	ENST00000466681	hsa-miR-503-5p	23311526	23311531	6mer	23311510	23311532	141	-14.15
CAediting_228905	chr2_188297554_+	ENSG00000156928.4	ENST00000466681	hsa-miR-561-3p	23311012	23311018	7mer-m8	23310998	23311019	140	-3.7
CAediting_228905	chr2_188297554_+	ENSG00000156928.4	ENST00000466681	hsa-miR-561-3p	23311488	23311494	7mer-m8	23311474	23311495	145	-4.8

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for MALSU1

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for MALSU1

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

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Relation with cancer stages for MALSU1

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for MALSU1

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for MALSU1

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for MALSU1

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene