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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: PCMTD1 (CAeditome ID:115294)

Gene summary for PCMTD1

check button Gene summary
Gene informationGene symbol

PCMTD1

Gene ID

115294

Gene nameprotein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1
Synonyms-
Cytomap

8q11.23

Type of geneprotein-coding
Descriptionprotein-L-isoaspartate O-methyltransferase domain-containing protein 1
Modification date20210518
UniProtAcc

Q96MG8

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID

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RNA A-to-I events for PCMTD1

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000168300.12
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_638039(51821194, -), CAediting_638040(51821205, -), CAediting_638041(51821208, -), CAediting_638042(51821223, -), CAediting_638043(51821237, -), CAediting_638044(51821242, -), CAediting_638045(51821255, -), CAediting_638046(51821261, -), CAediting_638047(51821268, -), CAediting_638048(51821279, -), CAediting_638049(51821299, -), CAediting_638050(51821303, -), CAediting_638051(51821307, -), CAediting_638052(51821318, -), CAediting_638053(51821321, -), CAediting_638054(51821347, -), CAediting_638055(51821386, -), CAediting_638056(51821391, -), CAediting_638057(51821397, -), CAediting_638058(51821405, -), CAediting_638059(51821408, -), CAediting_638060(51821413, -), CAediting_638061(51821414, -), CAediting_638062(51821420, -), CAediting_638063(51821429, -), CAediting_638064(51821802, -), CAediting_638065(51821809, -), CAediting_638066(51821819, -), CAediting_638067(51821832, -), CAediting_638068(51821857, -), CAediting_638069(51821868, -), CAediting_638070(51821884, -), CAediting_638071(51821900, -), CAediting_638072(51821903, -), CAediting_638073(51821986, -), CAediting_638074(51821999, -), CAediting_638075(51822007, -), CAediting_638076(51822008, -), CAediting_638077(51822030, -), CAediting_638078(51823198, -), CAediting_638079(51823205, -), CAediting_638080(51823207, -), CAediting_638081(51823221, -), CAediting_638082(51823246, -), CAediting_638083(51823247, -), CAediting_638084(51823260, -), CAediting_638085(51823298, -), CAediting_638086(51823332, -), CAediting_638087(51823340, -), CAediting_638088(51823342, -), CAediting_638089(51823352, -), CAediting_638090(51823364, -), CAediting_638091(51823369, -), CAediting_638092(51823380, -), CAediting_638093(51823382, -), CAediting_638094(51823386, -), CAediting_638095(51823388, -), CAediting_638096(51823403, -), CAediting_638097(51823408, -), CAediting_638098(51823415, -), CAediting_638099(51823421, -), CAediting_638100(51823427, -), CAediting_638101(51823459, -), CAediting_638102(51823463, -), CAediting_638103(51823475, -), CAediting_638104(51829684, -), CAediting_638105(51829736, -), CAediting_638106(51836811, -), CAediting_638107(51837809, -), CAediting_638108(51837813, -), CAediting_638109(51837814, -), CAediting_638110(51837847, -), CAediting_638111(51837848, -), CAediting_638112(51837876, -), CAediting_638113(51837877, -), CAediting_638114(51837908, -), CAediting_638115(51837926, -), CAediting_638116(51837968, -), CAediting_638117(51838004, -), CAediting_638118(51838011, -), CAediting_638119(51838019, -), CAediting_638120(51838029, -), CAediting_638121(51838033, -), CAediting_638122(51838230, -), CAediting_638123(51838241, -), CAediting_638124(51838242, -), CAediting_638125(51838243, -), CAediting_638126(51838269, -), CAediting_638127(51838299, -), CAediting_638128(51838377, -), CAediting_638129(51838406, -), CAediting_638130(51838432, -), CAediting_638131(51838437, -), CAediting_638132(51838457, -), CAediting_638133(51838484, -), CAediting_638134(51842372, -), CAediting_638135(51842404, -), CAediting_638136(51842423, -), CAediting_638137(51842443, -), CAediting_638138(51842453, -), CAediting_638139(51842549, -), CAediting_638140(51842597, -), CAediting_638141(51842598, -), CAediting_638142(51842600, -), CAediting_638143(51847582, -), CAediting_638144(51847995, -), CAediting_638145(51847999, -), CAediting_638146(51851683, -), CAediting_638147(51851684, -), CAediting_638148(51851752, -), CAediting_638149(51851758, -), CAediting_638150(51851767, -), CAediting_638151(51851784, -), CAediting_638152(51851815, -), CAediting_638153(51851823, -), CAediting_638154(51854612, -), CAediting_638155(51854613, -), CAediting_638156(51854620, -), CAediting_638157(51854622, -), CAediting_638158(51854634, -), CAediting_638159(51854635, -), CAediting_638160(51854636, -), CAediting_638161(51854649, -), CAediting_638162(51854657, -), CAediting_638163(51854684, -), CAediting_638164(51854697, -), CAediting_638165(51854765, -), CAediting_638166(51854768, -), CAediting_638167(51854769, -), CAediting_638168(51854791, -), CAediting_638169(51854794, -), CAediting_638170(51854872, -), CAediting_638171(51854877, -), CAediting_638172(51854930, -), CAediting_638173(51854931, -), CAediting_638174(51854953, -), CAediting_638175(51854963, -), CAediting_638176(51854983, -), CAediting_638177(51854992, -), CAediting_638178(51855003, -), CAediting_638179(51855009, -), CAediting_638180(51855012, -), CAediting_638181(51855046, -), CAediting_638182(51855050, -), CAediting_638183(51855052, -), CAediting_638184(51855062, -), CAediting_638185(51855091, -), CAediting_638186(51855092, -), CAediting_638187(51855271, -), CAediting_638188(51855283, -), CAediting_638189(51855298, -), CAediting_638190(51855311, -), CAediting_638191(51855345, -), CAediting_638192(51855409, -), CAediting_638193(51855410, -), CAediting_638194(51855411, -), CAediting_638195(51855417, -), CAediting_638196(51855421, -), CAediting_638197(51855451, -), CAediting_638198(51855457, -), CAediting_638199(51855471, -), CAediting_638200(51855476, -), CAediting_638201(51855495, -), CAediting_638202(51855519, -), CAediting_638203(51855700, -), CAediting_638204(51855755, -), CAediting_638205(51855764, -), CAediting_638206(51855792, -), CAediting_638207(51855798, -), CAediting_638208(51855820, -), CAediting_638209(51855824, -), CAediting_638210(51855828, -), CAediting_638211(51855852, -), CAediting_638212(51855858, -), CAediting_638213(51855863, -), CAediting_638214(51855864, -), CAediting_638215(51855865, -), CAediting_638216(51855871, -), CAediting_638217(51855873, -), CAediting_638218(51855886, -), CAediting_638219(51855897, -), CAediting_638220(51855902, -), CAediting_638221(51855905, -), CAediting_638222(51855919, -), CAediting_638223(51855941, -), CAediting_638224(51855948, -), CAediting_638225(51857909, -), CAediting_638226(51857910, -), CAediting_638227(51857923, -), CAediting_638228(51857948, -), CAediting_638229(51857978, -), CAediting_638230(51861815, -), CAediting_638231(51861828, -), CAediting_638232(51861850, -), CAediting_638233(51861851, -), CAediting_638234(51861877, -), CAediting_638235(51861882, -), CAediting_638236(51861885, -), CAediting_638237(51873949, -), CAediting_638238(51873980, -), CAediting_638239(51873985, -), CAediting_638240(51873989, -), CAediting_638241(51874009, -), CAediting_638242(51874018, -), CAediting_638243(51874019, -), CAediting_638244(51874024, -), CAediting_638245(51874078, -), CAediting_638246(51874079, -), CAediting_638247(51874094, -), CAediting_638248(51874103, -), CAediting_638249(51874104, -), CAediting_638250(51874119, -), CAediting_638251(51875675, -), CAediting_638252(51875757, -), CAediting_638253(51875762, -), CAediting_638254(51875763, -), CAediting_638255(51875764, -), CAediting_638256(51875820, -), CAediting_638257(51875823, -), CAediting_638258(51875849, -), CAediting_638259(51875850, -), CAediting_638260(51875880, -), CAediting_638261(51875882, -), CAediting_638262(51875886, -), CAediting_638263(51878666, -), CAediting_638264(51878667, -), CAediting_638265(51878687, -), CAediting_638266(51878697, -), CAediting_638267(51879031, -), CAediting_638268(51879040, -), CAediting_638269(51879050, -), CAediting_638270(51880493, -), CAediting_638271(51880494, -), CAediting_638272(51880507, -), CAediting_638273(51880516, -), CAediting_638274(51880519, -), CAediting_638275(51880521, -), CAediting_638276(51880526, -), CAediting_638277(51880531, -), CAediting_638278(51883345, -), CAediting_638279(51883346, -), CAediting_638280(51883377, -), CAediting_638281(51883399, -), CAediting_638282(51883402, -), CAediting_638283(51883405, -), CAediting_638284(51887879, -), CAediting_638285(51887880, -), CAediting_638286(51887907, -), CAediting_638287(51887939, -), CAediting_638288(51887948, -), CAediting_638289(51887971, -), CAediting_638290(51891297, -), CAediting_638291(51891332, -), CAediting_638292(51891347, -), CAediting_638293(51891437, -), CAediting_638294(51891447, -), CAediting_638295(51891459, -), CAediting_638296(51891487, -), CAediting_638297(51891515, -), CAediting_638298(51896013, -), CAediting_638299(51896014, -), CAediting_638300(51896018, -), CAediting_638301(51896031, -), CAediting_638302(51896042, -), CAediting_638303(51896043, -), CAediting_638304(51896057, -), CAediting_638305(51896074, -), CAediting_638306(51896078, -), CAediting_638307(51896083, -), CAediting_638308(51896084, -), CAediting_638309(51896110, -), CAediting_638310(51896125, -), CAediting_638311(51896128, -), CAediting_638312(51896142, -), CAediting_638313(51896149, -), CAediting_638314(51896178, -), CAediting_638315(51896192, -),

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RNA editing positional annotations for PCMTD1 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_638039chr8_51821194_-ncRNA_intronic
CAediting_638040chr8_51821205_-ncRNA_intronic
CAediting_638041chr8_51821208_-ncRNA_intronic
CAediting_638042chr8_51821223_-ncRNA_intronic
CAediting_638043chr8_51821237_-ncRNA_intronic
CAediting_638044chr8_51821242_-ncRNA_intronic
CAediting_638045chr8_51821255_-ncRNA_intronic
CAediting_638046chr8_51821261_-ncRNA_intronic
CAediting_638047chr8_51821268_-ncRNA_intronic
CAediting_638048chr8_51821279_-ncRNA_intronic
CAediting_638049chr8_51821299_-ncRNA_intronic
CAediting_638050chr8_51821303_-ncRNA_intronic
CAediting_638051chr8_51821307_-ncRNA_intronic
CAediting_638052chr8_51821318_-ncRNA_intronic
CAediting_638053chr8_51821321_-ncRNA_intronic
CAediting_638054chr8_51821347_-ncRNA_intronic
CAediting_638055chr8_51821386_-ncRNA_intronic
CAediting_638056chr8_51821391_-ncRNA_intronic
CAediting_638057chr8_51821397_-ncRNA_intronic
CAediting_638058chr8_51821405_-ncRNA_intronic
CAediting_638059chr8_51821408_-ncRNA_intronic
CAediting_638060chr8_51821413_-ncRNA_intronic
CAediting_638061chr8_51821414_-ncRNA_intronic
CAediting_638062chr8_51821420_-ncRNA_intronic
CAediting_638063chr8_51821429_-ncRNA_intronic
CAediting_638064chr8_51821802_-ncRNA_intronic
CAediting_638065chr8_51821809_-ncRNA_intronic
CAediting_638066chr8_51821819_-ncRNA_intronic
CAediting_638067chr8_51821832_-ncRNA_intronic
CAediting_638068chr8_51821857_-ncRNA_intronic
CAediting_638069chr8_51821868_-ncRNA_intronic
CAediting_638070chr8_51821884_-ncRNA_intronic
CAediting_638071chr8_51821900_-ncRNA_intronic
CAediting_638072chr8_51821903_-ncRNA_intronic
CAediting_638073chr8_51821986_-ncRNA_intronic
CAediting_638074chr8_51821999_-ncRNA_intronic
CAediting_638075chr8_51822007_-ncRNA_intronic
CAediting_638076chr8_51822008_-ncRNA_intronic
CAediting_638077chr8_51822030_-ncRNA_intronic
CAediting_638078chr8_51823198_-ncRNA_intronic
CAediting_638079chr8_51823205_-ncRNA_intronic
CAediting_638080chr8_51823207_-ncRNA_intronic
CAediting_638081chr8_51823221_-ncRNA_intronic
CAediting_638082chr8_51823246_-ncRNA_intronic
CAediting_638083chr8_51823247_-ncRNA_intronic
CAediting_638084chr8_51823260_-ncRNA_intronic
CAediting_638085chr8_51823298_-ncRNA_intronic
CAediting_638086chr8_51823332_-ncRNA_intronic
CAediting_638087chr8_51823340_-ncRNA_intronic
CAediting_638088chr8_51823342_-ncRNA_intronic
CAediting_638089chr8_51823352_-ncRNA_intronic
CAediting_638090chr8_51823364_-ncRNA_intronic
CAediting_638091chr8_51823369_-ncRNA_intronic
CAediting_638092chr8_51823380_-ncRNA_intronic
CAediting_638093chr8_51823382_-ncRNA_intronic
CAediting_638094chr8_51823386_-ncRNA_intronic
CAediting_638095chr8_51823388_-ncRNA_intronic
CAediting_638096chr8_51823403_-ncRNA_intronic
CAediting_638097chr8_51823408_-ncRNA_intronic
CAediting_638098chr8_51823415_-ncRNA_intronic
CAediting_638099chr8_51823421_-ncRNA_intronic
CAediting_638100chr8_51823427_-ncRNA_intronic
CAediting_638101chr8_51823459_-ncRNA_intronic
CAediting_638102chr8_51823463_-ncRNA_intronic
CAediting_638103chr8_51823475_-ncRNA_intronic
CAediting_638104chr8_51829684_-ncRNA_intronic
CAediting_638105chr8_51829736_-ncRNA_intronic
CAediting_638106chr8_51836811_-ncRNA_intronic
CAediting_638107chr8_51837809_-ncRNA_intronic
CAediting_638108chr8_51837813_-ncRNA_intronic
CAediting_638109chr8_51837814_-ncRNA_intronic
CAediting_638110chr8_51837847_-ncRNA_intronic
CAediting_638111chr8_51837848_-ncRNA_intronic
CAediting_638112chr8_51837876_-ncRNA_intronic
CAediting_638113chr8_51837877_-ncRNA_intronic
CAediting_638114chr8_51837908_-ncRNA_intronic
CAediting_638115chr8_51837926_-ncRNA_intronic
CAediting_638116chr8_51837968_-ncRNA_intronic
CAediting_638117chr8_51838004_-ncRNA_intronic
CAediting_638118chr8_51838011_-ncRNA_intronic
CAediting_638119chr8_51838019_-ncRNA_intronic
CAediting_638120chr8_51838029_-ncRNA_intronic
CAediting_638121chr8_51838033_-ncRNA_intronic
CAediting_638122chr8_51838230_-ncRNA_intronic
CAediting_638123chr8_51838241_-ncRNA_intronic
CAediting_638124chr8_51838242_-ncRNA_intronic
CAediting_638125chr8_51838243_-ncRNA_intronic
CAediting_638126chr8_51838269_-ncRNA_intronic
CAediting_638127chr8_51838299_-ncRNA_intronic
CAediting_638128chr8_51838377_-ncRNA_intronic
CAediting_638129chr8_51838406_-ncRNA_intronic
CAediting_638130chr8_51838432_-ncRNA_intronic
CAediting_638131chr8_51838437_-ncRNA_intronic
CAediting_638132chr8_51838457_-ncRNA_intronic
CAediting_638133chr8_51838484_-ncRNA_intronic
CAediting_638134chr8_51842372_-ncRNA_intronic
CAediting_638135chr8_51842404_-ncRNA_intronic
CAediting_638136chr8_51842423_-ncRNA_intronic
CAediting_638137chr8_51842443_-ncRNA_intronic
CAediting_638138chr8_51842453_-ncRNA_intronic
CAediting_638139chr8_51842549_-ncRNA_intronic
CAediting_638140chr8_51842597_-ncRNA_intronic
CAediting_638141chr8_51842598_-ncRNA_intronic
CAediting_638142chr8_51842600_-ncRNA_intronic
CAediting_638143chr8_51847582_-ncRNA_intronic
CAediting_638144chr8_51847995_-ncRNA_intronic
CAediting_638145chr8_51847999_-ncRNA_intronic
CAediting_638146chr8_51851683_-ncRNA_intronic
CAediting_638147chr8_51851684_-ncRNA_intronic
CAediting_638148chr8_51851752_-ncRNA_intronic
CAediting_638149chr8_51851758_-ncRNA_intronic
CAediting_638150chr8_51851767_-ncRNA_intronic
CAediting_638151chr8_51851784_-ncRNA_intronic
CAediting_638152chr8_51851815_-ncRNA_intronic
CAediting_638153chr8_51851823_-ncRNA_intronic
CAediting_638154chr8_51854612_-ncRNA_intronic
CAediting_638155chr8_51854613_-ncRNA_intronic
CAediting_638156chr8_51854620_-ncRNA_intronic
CAediting_638157chr8_51854622_-ncRNA_intronic
CAediting_638158chr8_51854634_-ncRNA_intronic
CAediting_638159chr8_51854635_-ncRNA_intronic
CAediting_638160chr8_51854636_-ncRNA_intronic
CAediting_638161chr8_51854649_-ncRNA_intronic
CAediting_638162chr8_51854657_-ncRNA_intronic
CAediting_638163chr8_51854684_-ncRNA_intronic
CAediting_638164chr8_51854697_-ncRNA_intronic
CAediting_638165chr8_51854765_-ncRNA_intronic
CAediting_638166chr8_51854768_-ncRNA_intronic
CAediting_638167chr8_51854769_-ncRNA_intronic
CAediting_638168chr8_51854791_-ncRNA_intronic
CAediting_638169chr8_51854794_-ncRNA_intronic
CAediting_638170chr8_51854872_-ncRNA_intronic
CAediting_638171chr8_51854877_-ncRNA_intronic
CAediting_638172chr8_51854930_-ncRNA_intronic
CAediting_638173chr8_51854931_-ncRNA_intronic
CAediting_638174chr8_51854953_-ncRNA_intronic
CAediting_638175chr8_51854963_-ncRNA_intronic
CAediting_638176chr8_51854983_-ncRNA_intronic
CAediting_638177chr8_51854992_-ncRNA_intronic
CAediting_638178chr8_51855003_-ncRNA_intronic
CAediting_638179chr8_51855009_-ncRNA_intronic
CAediting_638180chr8_51855012_-ncRNA_intronic
CAediting_638181chr8_51855046_-ncRNA_intronic
CAediting_638182chr8_51855050_-ncRNA_intronic
CAediting_638183chr8_51855052_-ncRNA_intronic
CAediting_638184chr8_51855062_-ncRNA_intronic
CAediting_638185chr8_51855091_-ncRNA_intronic
CAediting_638186chr8_51855092_-ncRNA_intronic
CAediting_638187chr8_51855271_-ncRNA_intronic
CAediting_638188chr8_51855283_-ncRNA_intronic
CAediting_638189chr8_51855298_-ncRNA_intronic
CAediting_638190chr8_51855311_-ncRNA_intronic
CAediting_638191chr8_51855345_-ncRNA_intronic
CAediting_638192chr8_51855409_-ncRNA_intronic
CAediting_638193chr8_51855410_-ncRNA_intronic
CAediting_638194chr8_51855411_-ncRNA_intronic
CAediting_638195chr8_51855417_-ncRNA_intronic
CAediting_638196chr8_51855421_-ncRNA_intronic
CAediting_638197chr8_51855451_-ncRNA_intronic
CAediting_638198chr8_51855457_-ncRNA_intronic
CAediting_638199chr8_51855471_-ncRNA_intronic
CAediting_638200chr8_51855476_-ncRNA_intronic
CAediting_638201chr8_51855495_-ncRNA_intronic
CAediting_638202chr8_51855519_-ncRNA_intronic
CAediting_638203chr8_51855700_-ncRNA_intronic
CAediting_638204chr8_51855755_-ncRNA_intronic
CAediting_638205chr8_51855764_-ncRNA_intronic
CAediting_638206chr8_51855792_-ncRNA_intronic
CAediting_638207chr8_51855798_-ncRNA_intronic
CAediting_638208chr8_51855820_-ncRNA_intronic
CAediting_638209chr8_51855824_-ncRNA_intronic
CAediting_638210chr8_51855828_-ncRNA_intronic
CAediting_638211chr8_51855852_-ncRNA_intronic
CAediting_638212chr8_51855858_-ncRNA_intronic
CAediting_638213chr8_51855863_-ncRNA_intronic
CAediting_638214chr8_51855864_-ncRNA_intronic
CAediting_638215chr8_51855865_-ncRNA_intronic
CAediting_638216chr8_51855871_-ncRNA_intronic
CAediting_638217chr8_51855873_-ncRNA_intronic
CAediting_638218chr8_51855886_-ncRNA_intronic
CAediting_638219chr8_51855897_-ncRNA_intronic
CAediting_638220chr8_51855902_-ncRNA_intronic
CAediting_638221chr8_51855905_-ncRNA_intronic
CAediting_638222chr8_51855919_-ncRNA_intronic
CAediting_638223chr8_51855941_-ncRNA_intronic
CAediting_638224chr8_51855948_-ncRNA_intronic
CAediting_638225chr8_51857909_-ncRNA_intronic
CAediting_638226chr8_51857910_-ncRNA_intronic
CAediting_638227chr8_51857923_-ncRNA_intronic
CAediting_638228chr8_51857948_-ncRNA_intronic
CAediting_638229chr8_51857978_-ncRNA_intronic
CAediting_638230chr8_51861815_-ncRNA_intronic
CAediting_638231chr8_51861828_-ncRNA_intronic
CAediting_638232chr8_51861850_-ncRNA_intronic
CAediting_638233chr8_51861851_-ncRNA_intronic
CAediting_638234chr8_51861877_-ncRNA_intronic
CAediting_638235chr8_51861882_-ncRNA_intronic
CAediting_638236chr8_51861885_-ncRNA_intronic
CAediting_638237chr8_51873949_-ncRNA_intronic
CAediting_638238chr8_51873980_-ncRNA_intronic
CAediting_638239chr8_51873985_-ncRNA_intronic
CAediting_638240chr8_51873989_-ncRNA_intronic
CAediting_638241chr8_51874009_-ncRNA_intronic
CAediting_638242chr8_51874018_-ncRNA_intronic
CAediting_638243chr8_51874019_-ncRNA_intronic
CAediting_638244chr8_51874024_-ncRNA_intronic
CAediting_638245chr8_51874078_-ncRNA_intronic
CAediting_638246chr8_51874079_-ncRNA_intronic
CAediting_638247chr8_51874094_-ncRNA_intronic
CAediting_638248chr8_51874103_-ncRNA_intronic
CAediting_638249chr8_51874104_-ncRNA_intronic
CAediting_638250chr8_51874119_-ncRNA_intronic
CAediting_638251chr8_51875675_-ncRNA_intronic
CAediting_638252chr8_51875757_-ncRNA_intronic
CAediting_638253chr8_51875762_-ncRNA_intronic
CAediting_638254chr8_51875763_-ncRNA_intronic
CAediting_638255chr8_51875764_-ncRNA_intronic
CAediting_638256chr8_51875820_-ncRNA_intronic
CAediting_638257chr8_51875823_-ncRNA_intronic
CAediting_638258chr8_51875849_-ncRNA_intronic
CAediting_638259chr8_51875850_-ncRNA_intronic
CAediting_638260chr8_51875880_-ncRNA_intronic
CAediting_638261chr8_51875882_-ncRNA_intronic
CAediting_638262chr8_51875886_-ncRNA_intronic
CAediting_638263chr8_51878666_-ncRNA_intronic
CAediting_638264chr8_51878667_-ncRNA_intronic
CAediting_638265chr8_51878687_-ncRNA_intronic
CAediting_638266chr8_51878697_-ncRNA_intronic
CAediting_638267chr8_51879031_-ncRNA_intronic
CAediting_638268chr8_51879040_-ncRNA_intronic
CAediting_638269chr8_51879050_-ncRNA_intronic
CAediting_638270chr8_51880493_-ncRNA_intronic
CAediting_638271chr8_51880494_-ncRNA_intronic
CAediting_638272chr8_51880507_-ncRNA_intronic
CAediting_638273chr8_51880516_-ncRNA_intronic
CAediting_638274chr8_51880519_-ncRNA_intronic
CAediting_638275chr8_51880521_-ncRNA_intronic
CAediting_638276chr8_51880526_-ncRNA_intronic
CAediting_638277chr8_51880531_-ncRNA_intronic
CAediting_638278chr8_51883345_-ncRNA_intronic
CAediting_638279chr8_51883346_-ncRNA_intronic
CAediting_638280chr8_51883377_-ncRNA_intronic
CAediting_638281chr8_51883399_-ncRNA_intronic
CAediting_638282chr8_51883402_-ncRNA_intronic
CAediting_638283chr8_51883405_-ncRNA_intronic
CAediting_638284chr8_51887879_-ncRNA_intronic
CAediting_638285chr8_51887880_-ncRNA_intronic
CAediting_638286chr8_51887907_-ncRNA_intronic
CAediting_638287chr8_51887939_-ncRNA_intronic
CAediting_638288chr8_51887948_-ncRNA_intronic
CAediting_638289chr8_51887971_-ncRNA_intronic
CAediting_638290chr8_51891297_-ncRNA_intronic
CAediting_638291chr8_51891332_-ncRNA_intronic
CAediting_638292chr8_51891347_-ncRNA_intronic
CAediting_638293chr8_51891437_-ncRNA_intronic
CAediting_638294chr8_51891447_-ncRNA_intronic
CAediting_638295chr8_51891459_-ncRNA_intronic
CAediting_638296chr8_51891487_-ncRNA_intronic
CAediting_638297chr8_51891515_-ncRNA_intronic
CAediting_638298chr8_51896013_-ncRNA_exonic
CAediting_638299chr8_51896014_-ncRNA_exonic
CAediting_638300chr8_51896018_-ncRNA_exonic
CAediting_638301chr8_51896031_-ncRNA_exonic
CAediting_638302chr8_51896042_-ncRNA_exonic
CAediting_638303chr8_51896043_-ncRNA_exonic
CAediting_638304chr8_51896057_-ncRNA_splicing
CAediting_638305chr8_51896074_-ncRNA_intronic
CAediting_638306chr8_51896078_-ncRNA_intronic
CAediting_638307chr8_51896083_-ncRNA_intronic
CAediting_638308chr8_51896084_-ncRNA_intronic
CAediting_638309chr8_51896110_-ncRNA_intronic
CAediting_638310chr8_51896125_-ncRNA_intronic
CAediting_638311chr8_51896128_-ncRNA_intronic
CAediting_638312chr8_51896142_-ncRNA_intronic
CAediting_638313chr8_51896149_-ncRNA_intronic
CAediting_638314chr8_51896178_-ncRNA_intronic
CAediting_638315chr8_51896192_-ncRNA_exonic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_638039chr8_51821194_-SINEAluAluJb
CAediting_638040chr8_51821205_-SINEAluAluJb
CAediting_638041chr8_51821208_-SINEAluAluJb
CAediting_638042chr8_51821223_-SINEAluAluJb
CAediting_638043chr8_51821237_-SINEAluAluJb
CAediting_638044chr8_51821242_-SINEAluAluJb
CAediting_638045chr8_51821255_-SINEAluAluJb
CAediting_638046chr8_51821261_-SINEAluAluJb
CAediting_638047chr8_51821268_-SINEAluAluJb
CAediting_638048chr8_51821279_-SINEAluAluJb
CAediting_638049chr8_51821299_-SINEAluAluJb
CAediting_638050chr8_51821303_-SINEAluAluJb
CAediting_638051chr8_51821307_-SINEAluAluJb
CAediting_638052chr8_51821318_-SINEAluAluJb
CAediting_638053chr8_51821321_-SINEAluAluJb
CAediting_638054chr8_51821347_-SINEAluAluJb
CAediting_638055chr8_51821386_-SINEAluAluJb
CAediting_638056chr8_51821391_-SINEAluAluJb
CAediting_638057chr8_51821397_-SINEAluAluJb
CAediting_638058chr8_51821405_-SINEAluAluJb
CAediting_638059chr8_51821408_-SINEAluAluJb
CAediting_638060chr8_51821413_-SINEAluAluJb
CAediting_638061chr8_51821414_-SINEAluAluJb
CAediting_638062chr8_51821420_-SINEAluAluJb
CAediting_638063chr8_51821429_-SINEAluAluJb
CAediting_638064chr8_51821802_-SINEAluAluSc8
CAediting_638065chr8_51821809_-SINEAluAluSc8
CAediting_638066chr8_51821819_-SINEAluAluSc8
CAediting_638067chr8_51821832_-SINEAluAluSc8
CAediting_638068chr8_51821857_-SINEAluAluSc8
CAediting_638069chr8_51821868_-SINEAluAluSc8
CAediting_638070chr8_51821884_-SINEAluAluSc8
CAediting_638071chr8_51821900_-SINEAluAluSc8
CAediting_638072chr8_51821903_-SINEAluAluSc8
CAediting_638073chr8_51821986_-SINEAluAluSc8
CAediting_638074chr8_51821999_-SINEAluAluSc8
CAediting_638075chr8_51822007_-SINEAluAluSc8
CAediting_638076chr8_51822008_-SINEAluAluSc8
CAediting_638077chr8_51822030_-SINEAluAluSc8
CAediting_638078chr8_51823198_-SINEAluAluJb
CAediting_638079chr8_51823205_-SINEAluAluJb
CAediting_638080chr8_51823207_-SINEAluAluJb
CAediting_638081chr8_51823221_-SINEAluAluJb
CAediting_638082chr8_51823246_-SINEAluAluJb
CAediting_638083chr8_51823247_-SINEAluAluJb
CAediting_638084chr8_51823260_-SINEAluAluJb
CAediting_638085chr8_51823298_-SINEAluAluJb
CAediting_638086chr8_51823332_-SINEAluAluJb
CAediting_638087chr8_51823340_-SINEAluAluJb
CAediting_638088chr8_51823342_-SINEAluAluJb
CAediting_638089chr8_51823352_-SINEAluAluJb
CAediting_638090chr8_51823364_-SINEAluAluJb
CAediting_638091chr8_51823369_-SINEAluAluJb
CAediting_638092chr8_51823380_-SINEAluAluJb
CAediting_638093chr8_51823382_-SINEAluAluJb
CAediting_638094chr8_51823386_-SINEAluAluJb
CAediting_638095chr8_51823388_-SINEAluAluJb
CAediting_638096chr8_51823403_-SINEAluAluJb
CAediting_638097chr8_51823408_-SINEAluAluJb
CAediting_638098chr8_51823415_-SINEAluAluJb
CAediting_638099chr8_51823421_-SINEAluAluJb
CAediting_638100chr8_51823427_-SINEAluAluJb
CAediting_638101chr8_51823459_-SINEAluAluJb
CAediting_638102chr8_51823463_-SINEAluAluJb
CAediting_638103chr8_51823475_-SINEAluAluJb
CAediting_638104chr8_51829684_-SINEAluAluSx1
CAediting_638105chr8_51829736_-SINEAluAluSx1
CAediting_638106chr8_51836811_-SINEAluAluJr
CAediting_638107chr8_51837809_-SINEAluAluSx3
CAediting_638108chr8_51837813_-SINEAluAluSx3
CAediting_638109chr8_51837814_-SINEAluAluSx3
CAediting_638110chr8_51837847_-SINEAluAluSx3
CAediting_638111chr8_51837848_-SINEAluAluSx3
CAediting_638112chr8_51837876_-SINEAluAluSx3
CAediting_638113chr8_51837877_-SINEAluAluSx3
CAediting_638114chr8_51837908_-SINEAluAluSx3
CAediting_638115chr8_51837926_-SINEAluAluSx3
CAediting_638116chr8_51837968_-SINEAluAluSx3
CAediting_638117chr8_51838004_-SINEAluAluSx3
CAediting_638118chr8_51838011_-SINEAluAluSx3
CAediting_638119chr8_51838019_-SINEAluAluSx3
CAediting_638120chr8_51838029_-SINEAluAluSx3
CAediting_638121chr8_51838033_-SINEAluAluSx3
CAediting_638122chr8_51838230_-SINEAluAluJr
CAediting_638123chr8_51838241_-SINEAluAluJr
CAediting_638124chr8_51838242_-SINEAluAluJr
CAediting_638125chr8_51838243_-SINEAluAluJr
CAediting_638126chr8_51838269_-SINEAluAluJr
CAediting_638127chr8_51838299_-SINEAluAluJr
CAediting_638128chr8_51838377_-SINEAluAluJr
CAediting_638129chr8_51838406_-SINEAluAluJr
CAediting_638130chr8_51838432_-SINEAluAluJr
CAediting_638131chr8_51838437_-SINEAluAluJr
CAediting_638132chr8_51838457_-SINEAluAluJr
CAediting_638133chr8_51838484_-SINEAluAluJr
CAediting_638134chr8_51842372_-SINEAluAluJr
CAediting_638135chr8_51842404_-SINEAluAluJr
CAediting_638136chr8_51842423_-SINEAluAluJr
CAediting_638137chr8_51842443_-SINEAluAluJr
CAediting_638138chr8_51842453_-SINEAluAluJr
CAediting_638139chr8_51842549_-SINEAluAluJr
CAediting_638140chr8_51842597_-SINEAluAluJr
CAediting_638141chr8_51842598_-SINEAluAluJr
CAediting_638142chr8_51842600_-SINEAluAluJr
CAediting_638143chr8_51847582_-SINEAluAluSz6
CAediting_638144chr8_51847995_-SINEAluAluJo
CAediting_638145chr8_51847999_-SINEAluAluJo
CAediting_638146chr8_51851683_-SINEAluAluSp
CAediting_638147chr8_51851684_-SINEAluAluSp
CAediting_638148chr8_51851752_-SINEAluAluSp
CAediting_638149chr8_51851758_-SINEAluAluSp
CAediting_638150chr8_51851767_-SINEAluAluSp
CAediting_638151chr8_51851784_-SINEAluAluSp
CAediting_638152chr8_51851815_-SINEAluAluSp
CAediting_638153chr8_51851823_-SINEAluAluSp
CAediting_638154chr8_51854612_-SINEAluAluSc8
CAediting_638155chr8_51854613_-SINEAluAluSc8
CAediting_638156chr8_51854620_-SINEAluAluSc8
CAediting_638157chr8_51854622_-SINEAluAluSc8
CAediting_638158chr8_51854634_-SINEAluAluSc8
CAediting_638159chr8_51854635_-SINEAluAluSc8
CAediting_638160chr8_51854636_-SINEAluAluSc8
CAediting_638161chr8_51854649_-SINEAluAluSc8
CAediting_638162chr8_51854657_-SINEAluAluSc8
CAediting_638163chr8_51854684_-SINEAluAluSc8
CAediting_638164chr8_51854697_-SINEAluAluSc8
CAediting_638165chr8_51854765_-SINEAluAluSc8
CAediting_638166chr8_51854768_-SINEAluAluSc8
CAediting_638167chr8_51854769_-SINEAluAluSc8
CAediting_638168chr8_51854791_-SINEAluAluSc8
CAediting_638169chr8_51854794_-SINEAluAluSc8
CAediting_638170chr8_51854872_-SINEAluAluSc8
CAediting_638171chr8_51854877_-SINEAluAluSc8
CAediting_638172chr8_51854930_-SINEAluAluSp
CAediting_638173chr8_51854931_-SINEAluAluSp
CAediting_638174chr8_51854953_-SINEAluAluSp
CAediting_638175chr8_51854963_-SINEAluAluSp
CAediting_638176chr8_51854983_-SINEAluAluSp
CAediting_638177chr8_51854992_-SINEAluAluSp
CAediting_638178chr8_51855003_-SINEAluAluSp
CAediting_638179chr8_51855009_-SINEAluAluSp
CAediting_638180chr8_51855012_-SINEAluAluSp
CAediting_638181chr8_51855046_-SINEAluAluSp
CAediting_638182chr8_51855050_-SINEAluAluSp
CAediting_638183chr8_51855052_-SINEAluAluSp
CAediting_638184chr8_51855062_-SINEAluAluSp
CAediting_638185chr8_51855091_-SINEAluAluSp
CAediting_638186chr8_51855092_-SINEAluAluSp
CAediting_638187chr8_51855271_-SINEAluAluSz
CAediting_638188chr8_51855283_-SINEAluAluSz
CAediting_638189chr8_51855298_-SINEAluAluSz
CAediting_638190chr8_51855311_-SINEAluAluSz
CAediting_638191chr8_51855345_-SINEAluAluSz
CAediting_638192chr8_51855409_-SINEAluAluSz
CAediting_638193chr8_51855410_-SINEAluAluSz
CAediting_638194chr8_51855411_-SINEAluAluSz
CAediting_638195chr8_51855417_-SINEAluAluSz
CAediting_638196chr8_51855421_-SINEAluAluSz
CAediting_638197chr8_51855451_-SINEAluAluSz
CAediting_638198chr8_51855457_-SINEAluAluSz
CAediting_638199chr8_51855471_-SINEAluAluSz
CAediting_638200chr8_51855476_-SINEAluAluSz
CAediting_638201chr8_51855495_-SINEAluAluSz
CAediting_638202chr8_51855519_-SINEAluAluSz
CAediting_638203chr8_51855700_-SINEAluAluY
CAediting_638204chr8_51855755_-SINEAluAluY
CAediting_638205chr8_51855764_-SINEAluAluY
CAediting_638206chr8_51855792_-SINEAluAluY
CAediting_638207chr8_51855798_-SINEAluAluY
CAediting_638208chr8_51855820_-SINEAluAluY
CAediting_638209chr8_51855824_-SINEAluAluY
CAediting_638210chr8_51855828_-SINEAluAluY
CAediting_638211chr8_51855852_-SINEAluAluY
CAediting_638212chr8_51855858_-SINEAluAluY
CAediting_638213chr8_51855863_-SINEAluAluY
CAediting_638214chr8_51855864_-SINEAluAluY
CAediting_638215chr8_51855865_-SINEAluAluY
CAediting_638216chr8_51855871_-SINEAluAluY
CAediting_638217chr8_51855873_-SINEAluAluY
CAediting_638218chr8_51855886_-SINEAluAluY
CAediting_638219chr8_51855897_-SINEAluAluY
CAediting_638220chr8_51855902_-SINEAluAluY
CAediting_638221chr8_51855905_-SINEAluAluY
CAediting_638222chr8_51855919_-SINEAluAluY
CAediting_638223chr8_51855941_-SINEAluAluY
CAediting_638224chr8_51855948_-SINEAluAluY
CAediting_638225chr8_51857909_-SINEAluAluJb
CAediting_638226chr8_51857910_-SINEAluAluJb
CAediting_638227chr8_51857923_-SINEAluAluJb
CAediting_638228chr8_51857948_-SINEAluAluJb
CAediting_638229chr8_51857978_-SINEAluAluJb
CAediting_638230chr8_51861815_-SINEAluAluJb
CAediting_638231chr8_51861828_-SINEAluAluJb
CAediting_638232chr8_51861850_-SINEAluAluJb
CAediting_638233chr8_51861851_-SINEAluAluJb
CAediting_638234chr8_51861877_-SINEAluAluJb
CAediting_638235chr8_51861882_-SINEAluAluJb
CAediting_638236chr8_51861885_-SINEAluAluJb
CAediting_638237chr8_51873949_-SINEAluAluSc
CAediting_638238chr8_51873980_-SINEAluAluSc
CAediting_638239chr8_51873985_-SINEAluAluSc
CAediting_638240chr8_51873989_-SINEAluAluSc
CAediting_638241chr8_51874009_-SINEAluAluSc
CAediting_638242chr8_51874018_-SINEAluAluSc
CAediting_638243chr8_51874019_-SINEAluAluSc
CAediting_638244chr8_51874024_-SINEAluAluSc
CAediting_638245chr8_51874078_-SINEAluAluSc
CAediting_638246chr8_51874079_-SINEAluAluSc
CAediting_638247chr8_51874094_-SINEAluAluSc
CAediting_638248chr8_51874103_-SINEAluAluSc
CAediting_638249chr8_51874104_-SINEAluAluSc
CAediting_638250chr8_51874119_-SINEAluAluSc
CAediting_638251chr8_51875675_-SINEAluAluJo
CAediting_638252chr8_51875757_-SINEAluAluJo
CAediting_638253chr8_51875762_-SINEAluAluJo
CAediting_638254chr8_51875763_-SINEAluAluJo
CAediting_638255chr8_51875764_-SINEAluAluJo
CAediting_638256chr8_51875820_-SINEAluAluJo
CAediting_638257chr8_51875823_-SINEAluAluJo
CAediting_638258chr8_51875849_-SINEAluAluJo
CAediting_638259chr8_51875850_-SINEAluAluJo
CAediting_638260chr8_51875880_-SINEAluAluJo
CAediting_638261chr8_51875882_-SINEAluAluJo
CAediting_638262chr8_51875886_-SINEAluAluJo
CAediting_638263chr8_51878666_-SINEAluAluJo
CAediting_638264chr8_51878667_-SINEAluAluJo
CAediting_638265chr8_51878687_-SINEAluAluJo
CAediting_638266chr8_51878697_-SINEAluAluJo
CAediting_638267chr8_51879031_-SINEAluAluJb
CAediting_638268chr8_51879040_-SINEAluAluJb
CAediting_638269chr8_51879050_-SINEAluAluJb
CAediting_638284chr8_51887879_-SINEAluAluSc
CAediting_638285chr8_51887880_-SINEAluAluSc
CAediting_638286chr8_51887907_-SINEAluAluSc
CAediting_638287chr8_51887939_-SINEAluAluSc
CAediting_638288chr8_51887948_-SINEAluAluSc
CAediting_638289chr8_51887971_-SINEAluAluSc
CAediting_638290chr8_51891297_-SINEAluAluJb
CAediting_638291chr8_51891332_-SINEAluAluJb
CAediting_638292chr8_51891347_-SINEAluAluJb
CAediting_638293chr8_51891437_-SINEAluAluJb
CAediting_638294chr8_51891447_-SINEAluAluJb
CAediting_638295chr8_51891459_-SINEAluAluJb
CAediting_638296chr8_51891487_-SINEAluAluJb
CAediting_638297chr8_51891515_-SINEAluAluJb
CAediting_638298chr8_51896013_-SINEAluAluSx1
CAediting_638299chr8_51896014_-SINEAluAluSx1
CAediting_638300chr8_51896018_-SINEAluAluSx1
CAediting_638301chr8_51896031_-SINEAluAluSx1
CAediting_638302chr8_51896042_-SINEAluAluSx1
CAediting_638303chr8_51896043_-SINEAluAluSx1
CAediting_638304chr8_51896057_-SINEAluAluSx1
CAediting_638305chr8_51896074_-SINEAluAluSx1
CAediting_638306chr8_51896078_-SINEAluAluSx1
CAediting_638307chr8_51896083_-SINEAluAluSx1
CAediting_638308chr8_51896084_-SINEAluAluSx1
CAediting_638309chr8_51896110_-SINEAluAluSx1
CAediting_638310chr8_51896125_-SINEAluAluSx1
CAediting_638311chr8_51896128_-SINEAluAluSx1
CAediting_638312chr8_51896142_-SINEAluAluSx1
CAediting_638313chr8_51896149_-SINEAluAluSx1
CAediting_638314chr8_51896178_-SINEAluAluSx1
CAediting_638315chr8_51896192_-SINEAluAluSx1

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RNA A-to-I editing events in the alternative splicing sites for PCMTD1

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000168300.12.PCMTD1.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000168300.12.PCMTD1.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for PCMTD1

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.
LAML.CAediting_638088.ENSG00000168300.PCMTD1.png
Soverview

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Protein coding region RNA A-to-I editings for PCMTD1

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for PCMTD1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_393chr1_1167164_+ENSG00000168300.12ENST00000544451hsa-miR-200b-3p51818920518189278mer-1a5181892051818944157-20.55
CAediting_393chr1_1167164_+ENSG00000168300.12ENST00000544451hsa-miR-200b-3p51820292518202976mer5182029151820312140-11.32
CAediting_393chr1_1167164_+ENSG00000168300.12ENST00000360540hsa-miR-200b-3p51818920518189278mer-1a5181892051818944157-20.55
CAediting_393chr1_1167164_+ENSG00000168300.12ENST00000360540hsa-miR-200b-3p51820292518202976mer5182029151820312140-11.32
CAediting_393chr1_1167164_+ENSG00000168300.12ENST00000521344hsa-miR-200b-3p51849029518490357mer-m85184902851849049147-10.81
CAediting_1229415chr17_67471547_+ENSG00000168300.12ENST00000544451hsa-miR-548aa51818517518185237mer-m85181851651818540170-14.45
CAediting_1229415chr17_67471547_+ENSG00000168300.12ENST00000544451hsa-miR-548aa51818331518183377mer-m85181833051818362144-11.46
CAediting_117844chr1_162342605_+ENSG00000168300.12ENST00000544451hsa-miR-556-3p51819845518198517mer-m85181984451819865140-10.23
CAediting_1229415chr17_67471547_+ENSG00000168300.12ENST00000360540hsa-miR-548aa51818517518185237mer-m85181851651818540170-14.45
CAediting_1229415chr17_67471547_+ENSG00000168300.12ENST00000360540hsa-miR-548aa51818331518183377mer-m85181833051818362144-11.46
CAediting_117844chr1_162342605_+ENSG00000168300.12ENST00000360540hsa-miR-556-3p51819845518198517mer-m85181984451819865140-10.23
CAediting_1160181chr17_7017644_-ENSG00000168300.12ENST00000521344hsa-miR-195-3p51849396518494027mer-m85184939551849418146-19.36

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_393chr1_1167164_+ENSG00000168300.12ENST00000544451hsa-miR-200b-3p51819615518196217mer-m85181961451819636145-9.13
CAediting_393chr1_1167164_+ENSG00000168300.12ENST00000360540hsa-miR-200b-3p51819615518196217mer-m85181961451819636145-9.13
CAediting_1160181chr17_7017644_-ENSG00000168300.12ENST00000521344hsa-miR-195-3p51849818518498247mer-m85184981751849838142-11.18
CAediting_228905chr2_188297554_+ENSG00000168300.12ENST00000521344hsa-miR-561-3p51849537518495437mer-m85184953651849557145-9.69

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for PCMTD1

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for PCMTD1

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
BRCACAediting_638039chr8_51821194_-....0.004407487928699570.388660573055135
ESCACAediting_638040chr8_51821205_-0.003955268103758030.333328548770092....
BRCACAediting_638054chr8_51821347_-0.02186514444860110.223580880258133....
LAMLCAediting_638054chr8_51821347_-..0.01816180242713930.258787275382942..
BRCACAediting_638085chr8_51823298_-0.04779504201280710.219263171323495....
BRCACAediting_638088chr8_51823342_-0.004563711793352460.308377242141947....
LAMLCAediting_638101chr8_51823459_-0.02757303235132810.2798976709839420.0406712070688270.2607431936101750.00466832052101230.354746521333063
BRCACAediting_638108chr8_51837813_-0.03427459940967680.273794959475053....

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Relation with cancer stages for PCMTD1

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

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Relation with survival for PCMTD1

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for PCMTD1

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for PCMTD1

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource