Home

Download

Statistics

Examples

Help

Contact

Editing gene: CCDC124 (CAeditome ID:115098)

Gene summary for CCDC124

Gene summary

Gene information	Gene symbol	CCDC124
	Gene ID	115098
	Gene name	coiled-coil domain containing 124
	Synonyms	Lso2\|oxs1
	Cytomap	19p13.11
	Type of gene	protein-coding
	Description	coiled-coil domain-containing protein 124
	Modification date	20210518
	UniProtAcc	Q96CT7
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
CCDC124	GO:0005829	Coiled-coil domain-containing protein 124	0000052
CCDC124	GO:0005886	Coiled-coil domain-containing protein 124	0000052

Top

RNA A-to-I events for CCDC124

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000007080.9

RNA A-to-I editing events in Cancer.

CAediting_1317830(17934046, +), CAediting_1317831(17934060, +), CAediting_1317832(17934062, +), CAediting_1317833(17934069, +), CAediting_1317834(17934095, +), CAediting_1317835(17934096, +), CAediting_1317836(17934109, +), CAediting_1317837(17934114, +), CAediting_1317838(17934128, +), CAediting_1317839(17934148, +), CAediting_1317840(17934162, +), CAediting_1317841(17934163, +), CAediting_1317842(17934168, +), CAediting_1317843(17934170, +), CAediting_1317844(17934171, +), CAediting_1317845(17934224, +), CAediting_1317846(17934226, +), CAediting_1317847(17934227, +), CAediting_1317848(17934228, +), CAediting_1317849(17934235, +), CAediting_1317850(17934265, +), CAediting_1317851(17934266, +), CAediting_1317852(17934307, +), CAediting_1317853(17934331, +), CAediting_1317854(17934336, +), CAediting_1317855(17934338, +), CAediting_1317856(17934368, +), CAediting_1317857(17934373, +), CAediting_1317858(17934375, +), CAediting_1317859(17934484, +), CAediting_1317860(17934494, +), CAediting_1317861(17934508, +), CAediting_1317862(17934514, +), CAediting_1317863(17934522, +), CAediting_1317864(17934530, +), CAediting_1317865(17934531, +), CAediting_1317866(17934536, +), CAediting_1317867(17934539, +), CAediting_1317868(17934547, +), CAediting_1317869(17934553, +), CAediting_1317870(17934566, +), CAediting_1317871(17934571, +), CAediting_1317872(17934576, +), CAediting_1317873(17934584, +), CAediting_1317874(17934585, +), CAediting_1317875(17934620, +), CAediting_1317876(17934621, +), CAediting_1317877(17934656, +), CAediting_1317878(17934660, +), CAediting_1317879(17934662, +), CAediting_1317880(17934672, +), CAediting_1317881(17934676, +), CAediting_1317882(17934698, +), CAediting_1317883(17934708, +), CAediting_1317884(17934728, +), CAediting_1317885(17934932, +), CAediting_1317886(17934933, +), CAediting_1317887(17934939, +), CAediting_1317888(17934990, +), CAediting_1317889(17935001, +), CAediting_1317890(17935009, +), CAediting_1317891(17935020, +), CAediting_1317892(17935033, +), CAediting_1317893(17935041, +), CAediting_1317894(17935042, +), CAediting_1317895(17935045, +), CAediting_1317896(17935051, +), CAediting_1317897(17935052, +), CAediting_1317898(17935057, +), CAediting_1317899(17935061, +), CAediting_1317900(17935064, +), CAediting_1317901(17935121, +), CAediting_1317902(17935133, +), CAediting_1317903(17935134, +), CAediting_1317904(17935146, +), CAediting_1317905(17935147, +), CAediting_1317906(17935150, +), CAediting_1317907(17935164, +), CAediting_1317908(17935172, +), CAediting_1317909(17935174, +), CAediting_1317910(17935177, +), CAediting_1317911(17935183, +), CAediting_1317912(17935186, +), CAediting_1317913(17935188, +), CAediting_1317914(17935189, +), CAediting_1317915(17935190, +), CAediting_1317916(17935490, +), CAediting_1317917(17935538, +), CAediting_1317918(17935656, +), CAediting_1317919(17935721, +), CAediting_1317920(17935723, +), CAediting_1317921(17935817, +), CAediting_1317922(17935822, +), CAediting_1317923(17935830, +), CAediting_1317924(17935843, +), CAediting_1317925(17935844, +), CAediting_1317926(17935845, +), CAediting_1317927(17935857, +), CAediting_1317928(17935924, +), CAediting_1317929(17935984, +), CAediting_1317930(17936022, +), CAediting_1317931(17936044, +), CAediting_1317932(17936066, +), CAediting_1317933(17936070, +), CAediting_1317934(17936134, +), CAediting_1317935(17936139, +), CAediting_1317936(17936167, +), CAediting_1317937(17936179, +), CAediting_1317938(17938255, +), CAediting_1317939(17938284, +), CAediting_1317940(17938289, +), CAediting_1317941(17938731, +),

Top

RNA editing positional annotations for CCDC124 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1317830	chr19_17934046_+	ncRNA_intronic
CAediting_1317831	chr19_17934060_+	ncRNA_intronic
CAediting_1317832	chr19_17934062_+	ncRNA_intronic
CAediting_1317833	chr19_17934069_+	ncRNA_intronic
CAediting_1317834	chr19_17934095_+	ncRNA_intronic
CAediting_1317835	chr19_17934096_+	ncRNA_intronic
CAediting_1317836	chr19_17934109_+	ncRNA_intronic
CAediting_1317837	chr19_17934114_+	ncRNA_intronic
CAediting_1317838	chr19_17934128_+	ncRNA_intronic
CAediting_1317839	chr19_17934148_+	ncRNA_intronic
CAediting_1317840	chr19_17934162_+	ncRNA_intronic
CAediting_1317841	chr19_17934163_+	ncRNA_intronic
CAediting_1317842	chr19_17934168_+	ncRNA_intronic
CAediting_1317843	chr19_17934170_+	ncRNA_intronic
CAediting_1317844	chr19_17934171_+	ncRNA_intronic
CAediting_1317845	chr19_17934224_+	ncRNA_intronic
CAediting_1317846	chr19_17934226_+	ncRNA_intronic
CAediting_1317847	chr19_17934227_+	ncRNA_intronic
CAediting_1317848	chr19_17934228_+	ncRNA_intronic
CAediting_1317849	chr19_17934235_+	ncRNA_intronic
CAediting_1317850	chr19_17934265_+	ncRNA_intronic
CAediting_1317851	chr19_17934266_+	ncRNA_intronic
CAediting_1317852	chr19_17934307_+	ncRNA_intronic
CAediting_1317853	chr19_17934331_+	ncRNA_intronic
CAediting_1317854	chr19_17934336_+	ncRNA_intronic
CAediting_1317855	chr19_17934338_+	ncRNA_intronic
CAediting_1317856	chr19_17934368_+	ncRNA_intronic
CAediting_1317857	chr19_17934373_+	ncRNA_intronic
CAediting_1317858	chr19_17934375_+	ncRNA_intronic
CAediting_1317859	chr19_17934484_+	ncRNA_intronic
CAediting_1317860	chr19_17934494_+	ncRNA_intronic
CAediting_1317861	chr19_17934508_+	ncRNA_intronic
CAediting_1317862	chr19_17934514_+	ncRNA_intronic
CAediting_1317863	chr19_17934522_+	ncRNA_intronic
CAediting_1317864	chr19_17934530_+	ncRNA_intronic
CAediting_1317865	chr19_17934531_+	ncRNA_intronic
CAediting_1317866	chr19_17934536_+	ncRNA_intronic
CAediting_1317867	chr19_17934539_+	ncRNA_intronic
CAediting_1317868	chr19_17934547_+	ncRNA_intronic
CAediting_1317869	chr19_17934553_+	ncRNA_intronic
CAediting_1317870	chr19_17934566_+	ncRNA_intronic
CAediting_1317871	chr19_17934571_+	ncRNA_intronic
CAediting_1317872	chr19_17934576_+	ncRNA_intronic
CAediting_1317873	chr19_17934584_+	ncRNA_intronic
CAediting_1317874	chr19_17934585_+	ncRNA_intronic
CAediting_1317875	chr19_17934620_+	ncRNA_intronic
CAediting_1317876	chr19_17934621_+	ncRNA_intronic
CAediting_1317877	chr19_17934656_+	ncRNA_intronic
CAediting_1317878	chr19_17934660_+	ncRNA_intronic
CAediting_1317879	chr19_17934662_+	ncRNA_intronic
CAediting_1317880	chr19_17934672_+	ncRNA_intronic
CAediting_1317881	chr19_17934676_+	ncRNA_intronic
CAediting_1317882	chr19_17934698_+	ncRNA_intronic
CAediting_1317883	chr19_17934708_+	ncRNA_intronic
CAediting_1317884	chr19_17934728_+	ncRNA_intronic
CAediting_1317885	chr19_17934932_+	ncRNA_intronic
CAediting_1317886	chr19_17934933_+	ncRNA_intronic
CAediting_1317887	chr19_17934939_+	ncRNA_intronic
CAediting_1317888	chr19_17934990_+	ncRNA_intronic
CAediting_1317889	chr19_17935001_+	ncRNA_intronic
CAediting_1317890	chr19_17935009_+	ncRNA_intronic
CAediting_1317891	chr19_17935020_+	ncRNA_intronic
CAediting_1317892	chr19_17935033_+	ncRNA_intronic
CAediting_1317893	chr19_17935041_+	ncRNA_intronic
CAediting_1317894	chr19_17935042_+	ncRNA_intronic
CAediting_1317895	chr19_17935045_+	ncRNA_intronic
CAediting_1317896	chr19_17935051_+	ncRNA_intronic
CAediting_1317897	chr19_17935052_+	ncRNA_intronic
CAediting_1317898	chr19_17935057_+	ncRNA_intronic
CAediting_1317899	chr19_17935061_+	ncRNA_intronic
CAediting_1317900	chr19_17935064_+	ncRNA_intronic
CAediting_1317901	chr19_17935121_+	ncRNA_intronic
CAediting_1317902	chr19_17935133_+	ncRNA_intronic
CAediting_1317903	chr19_17935134_+	ncRNA_intronic
CAediting_1317904	chr19_17935146_+	ncRNA_intronic
CAediting_1317905	chr19_17935147_+	ncRNA_intronic
CAediting_1317906	chr19_17935150_+	ncRNA_intronic
CAediting_1317907	chr19_17935164_+	ncRNA_intronic
CAediting_1317908	chr19_17935172_+	ncRNA_intronic
CAediting_1317909	chr19_17935174_+	ncRNA_intronic
CAediting_1317910	chr19_17935177_+	ncRNA_intronic
CAediting_1317911	chr19_17935183_+	ncRNA_intronic
CAediting_1317912	chr19_17935186_+	ncRNA_intronic
CAediting_1317913	chr19_17935188_+	ncRNA_intronic
CAediting_1317914	chr19_17935189_+	ncRNA_intronic
CAediting_1317915	chr19_17935190_+	ncRNA_intronic
CAediting_1317916	chr19_17935490_+	ncRNA_intronic
CAediting_1317917	chr19_17935538_+	ncRNA_intronic
CAediting_1317918	chr19_17935656_+	ncRNA_intronic
CAediting_1317919	chr19_17935721_+	ncRNA_intronic
CAediting_1317920	chr19_17935723_+	ncRNA_intronic
CAediting_1317921	chr19_17935817_+	ncRNA_intronic
CAediting_1317922	chr19_17935822_+	ncRNA_intronic
CAediting_1317923	chr19_17935830_+	ncRNA_intronic
CAediting_1317924	chr19_17935843_+	ncRNA_intronic
CAediting_1317925	chr19_17935844_+	ncRNA_intronic
CAediting_1317926	chr19_17935845_+	ncRNA_intronic
CAediting_1317927	chr19_17935857_+	ncRNA_intronic
CAediting_1317928	chr19_17935924_+	ncRNA_intronic
CAediting_1317929	chr19_17935984_+	ncRNA_intronic
CAediting_1317930	chr19_17936022_+	ncRNA_intronic
CAediting_1317931	chr19_17936044_+	ncRNA_intronic
CAediting_1317932	chr19_17936066_+	ncRNA_intronic
CAediting_1317933	chr19_17936070_+	ncRNA_intronic
CAediting_1317934	chr19_17936134_+	ncRNA_intronic
CAediting_1317935	chr19_17936139_+	ncRNA_intronic
CAediting_1317936	chr19_17936167_+	ncRNA_intronic
CAediting_1317937	chr19_17936179_+	ncRNA_intronic
CAediting_1317938	chr19_17938255_+	intronic
CAediting_1317939	chr19_17938284_+	intronic
CAediting_1317940	chr19_17938289_+	intronic
CAediting_1317941	chr19_17938731_+	intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1317830	chr19_17934046_+	SINE	Alu	AluSx1
CAediting_1317831	chr19_17934060_+	SINE	Alu	AluSx1
CAediting_1317832	chr19_17934062_+	SINE	Alu	AluSx1
CAediting_1317833	chr19_17934069_+	SINE	Alu	AluSx1
CAediting_1317834	chr19_17934095_+	SINE	Alu	AluSx1
CAediting_1317835	chr19_17934096_+	SINE	Alu	AluSx1
CAediting_1317836	chr19_17934109_+	SINE	Alu	AluSx1
CAediting_1317837	chr19_17934114_+	SINE	Alu	AluSx1
CAediting_1317838	chr19_17934128_+	SINE	Alu	AluSx1
CAediting_1317839	chr19_17934148_+	SINE	Alu	AluSx1
CAediting_1317840	chr19_17934162_+	SINE	Alu	AluSx1
CAediting_1317841	chr19_17934163_+	SINE	Alu	AluSx1
CAediting_1317842	chr19_17934168_+	SINE	Alu	AluSx1
CAediting_1317843	chr19_17934170_+	SINE	Alu	AluSx1
CAediting_1317844	chr19_17934171_+	SINE	Alu	AluSx1
CAediting_1317845	chr19_17934224_+	SINE	Alu	AluSx1
CAediting_1317846	chr19_17934226_+	SINE	Alu	AluSx1
CAediting_1317847	chr19_17934227_+	SINE	Alu	AluSx1
CAediting_1317848	chr19_17934228_+	SINE	Alu	AluSx1
CAediting_1317849	chr19_17934235_+	SINE	Alu	AluSx1
CAediting_1317850	chr19_17934265_+	SINE	Alu	AluSx1
CAediting_1317851	chr19_17934266_+	SINE	Alu	AluSx1
CAediting_1317852	chr19_17934307_+	SINE	Alu	AluSx1
CAediting_1317853	chr19_17934331_+	SINE	Alu	AluSx1
CAediting_1317854	chr19_17934336_+	SINE	Alu	AluSx1
CAediting_1317855	chr19_17934338_+	SINE	Alu	AluSx1
CAediting_1317856	chr19_17934368_+	SINE	Alu	AluSx1
CAediting_1317857	chr19_17934373_+	SINE	Alu	AluSx1
CAediting_1317858	chr19_17934375_+	SINE	Alu	AluSx1
CAediting_1317859	chr19_17934484_+	LINE	L1	L1MB5
CAediting_1317860	chr19_17934494_+	LINE	L1	L1MB5
CAediting_1317861	chr19_17934508_+	SINE	Alu	AluJb
CAediting_1317862	chr19_17934514_+	SINE	Alu	AluJb
CAediting_1317863	chr19_17934522_+	SINE	Alu	AluJb
CAediting_1317864	chr19_17934530_+	SINE	Alu	AluJb
CAediting_1317865	chr19_17934531_+	SINE	Alu	AluJb
CAediting_1317866	chr19_17934536_+	SINE	Alu	AluJb
CAediting_1317867	chr19_17934539_+	SINE	Alu	AluJb
CAediting_1317868	chr19_17934547_+	SINE	Alu	AluJb
CAediting_1317869	chr19_17934553_+	SINE	Alu	AluJb
CAediting_1317870	chr19_17934566_+	SINE	Alu	AluJb
CAediting_1317871	chr19_17934571_+	SINE	Alu	AluJb
CAediting_1317872	chr19_17934576_+	SINE	Alu	AluJb
CAediting_1317873	chr19_17934584_+	SINE	Alu	AluJb
CAediting_1317874	chr19_17934585_+	SINE	Alu	AluJb
CAediting_1317875	chr19_17934620_+	SINE	Alu	AluJb
CAediting_1317876	chr19_17934621_+	SINE	Alu	AluJb
CAediting_1317877	chr19_17934656_+	SINE	Alu	AluJb
CAediting_1317878	chr19_17934660_+	SINE	Alu	AluJb
CAediting_1317879	chr19_17934662_+	SINE	Alu	AluJb
CAediting_1317880	chr19_17934672_+	SINE	Alu	AluJb
CAediting_1317881	chr19_17934676_+	SINE	Alu	AluJb
CAediting_1317882	chr19_17934698_+	SINE	Alu	AluJb
CAediting_1317883	chr19_17934708_+	SINE	Alu	AluJb
CAediting_1317884	chr19_17934728_+	SINE	Alu	AluJb
CAediting_1317885	chr19_17934932_+	SINE	Alu	AluJr
CAediting_1317886	chr19_17934933_+	SINE	Alu	AluJr
CAediting_1317887	chr19_17934939_+	SINE	Alu	AluJr
CAediting_1317888	chr19_17934990_+	SINE	Alu	AluJr
CAediting_1317889	chr19_17935001_+	SINE	Alu	AluJr
CAediting_1317890	chr19_17935009_+	SINE	Alu	AluJr
CAediting_1317891	chr19_17935020_+	SINE	Alu	AluJr
CAediting_1317892	chr19_17935033_+	SINE	Alu	AluJr
CAediting_1317893	chr19_17935041_+	SINE	Alu	AluJr
CAediting_1317894	chr19_17935042_+	SINE	Alu	AluJr
CAediting_1317895	chr19_17935045_+	SINE	Alu	AluJr
CAediting_1317896	chr19_17935051_+	SINE	Alu	AluJr
CAediting_1317897	chr19_17935052_+	SINE	Alu	AluJr
CAediting_1317898	chr19_17935057_+	SINE	Alu	AluJr
CAediting_1317899	chr19_17935061_+	SINE	Alu	AluJr
CAediting_1317900	chr19_17935064_+	SINE	Alu	AluJr
CAediting_1317901	chr19_17935121_+	SINE	Alu	AluJr
CAediting_1317902	chr19_17935133_+	SINE	Alu	AluJr
CAediting_1317903	chr19_17935134_+	SINE	Alu	AluJr
CAediting_1317904	chr19_17935146_+	SINE	Alu	AluJr
CAediting_1317905	chr19_17935147_+	SINE	Alu	AluJr
CAediting_1317906	chr19_17935150_+	SINE	Alu	AluJr
CAediting_1317907	chr19_17935164_+	SINE	Alu	AluJr
CAediting_1317908	chr19_17935172_+	SINE	Alu	AluJr
CAediting_1317909	chr19_17935174_+	SINE	Alu	AluJr
CAediting_1317910	chr19_17935177_+	SINE	Alu	AluJr
CAediting_1317911	chr19_17935183_+	SINE	Alu	AluJr
CAediting_1317912	chr19_17935186_+	SINE	Alu	AluJr
CAediting_1317913	chr19_17935188_+	SINE	Alu	AluJr
CAediting_1317914	chr19_17935189_+	SINE	Alu	AluJr
CAediting_1317915	chr19_17935190_+	SINE	Alu	AluJr
CAediting_1317916	chr19_17935490_+	SINE	Alu	AluSx
CAediting_1317917	chr19_17935538_+	SINE	Alu	AluSx
CAediting_1317918	chr19_17935656_+	SINE	Alu	AluSx1
CAediting_1317919	chr19_17935721_+	SINE	Alu	AluSx1
CAediting_1317920	chr19_17935723_+	SINE	Alu	AluSx1
CAediting_1317921	chr19_17935817_+	SINE	Alu	AluSx1
CAediting_1317922	chr19_17935822_+	SINE	Alu	AluSx1
CAediting_1317923	chr19_17935830_+	SINE	Alu	AluSx1
CAediting_1317924	chr19_17935843_+	SINE	Alu	AluSx1
CAediting_1317925	chr19_17935844_+	SINE	Alu	AluSx1
CAediting_1317926	chr19_17935845_+	SINE	Alu	AluSx1
CAediting_1317927	chr19_17935857_+	SINE	Alu	AluSx1
CAediting_1317928	chr19_17935924_+	SINE	Alu	AluSz
CAediting_1317929	chr19_17935984_+	SINE	Alu	AluSz
CAediting_1317930	chr19_17936022_+	SINE	Alu	AluSz
CAediting_1317931	chr19_17936044_+	SINE	Alu	AluSz
CAediting_1317932	chr19_17936066_+	SINE	Alu	AluSz
CAediting_1317933	chr19_17936070_+	SINE	Alu	AluSz
CAediting_1317934	chr19_17936134_+	SINE	Alu	AluSz
CAediting_1317935	chr19_17936139_+	SINE	Alu	AluSz
CAediting_1317936	chr19_17936167_+	SINE	Alu	AluSz
CAediting_1317937	chr19_17936179_+	SINE	Alu	AluSz
CAediting_1317938	chr19_17938255_+	SINE	Alu	AluJr
CAediting_1317939	chr19_17938284_+	SINE	Alu	AluJr
CAediting_1317940	chr19_17938289_+	SINE	Alu	AluJr
CAediting_1317941	chr19_17938731_+	SINE	Alu	AluJb

Top

RNA A-to-I editing events in the alternative splicing sites for CCDC124

RNA A-to-I editing(s) in the alternative splicing sites.

AStype	CAeditomID	Editing position	AS position	AS direction	Exonic location	Wildtype sequence	Wildtype splicing strength	RNA edited sequence	RNA edited splicing strength
ES	CAediting_1317914	chr19_17935189_+	17935189:17935197	5SS	3+0i	AACGTGAGT	9.54	GACGTGAGT	9.22
ES	CAediting_1317915	chr19_17935190_+	17935189:17935197	5SS	2+0i	AACGTGAGT	9.54	AGCGTGAGT	8.2

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000007080.9.CCDC124.

Correlation between RNA A-to-I editing and PSI for ENSG00000007080.9.CCDC124.

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for CCDC124

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

Top

Protein coding region RNA A-to-I editings for CCDC124

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

Top

The effects of the RNA editing to the miRNA binding sites for CCDC124

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_77128	chr1_85133844_+	ENSG00000007080.9	ENST00000597436	hsa-miR-4423-3p	17943947	17943954	8mer-1a	17943933	17943954	141	-16.75

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for CCDC124

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

Top

Relation with ADAR for CCDC124

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

Top

Relation with cancer stages for CCDC124

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

Top

Relation with survival for CCDC124

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

Top

RelatedDrugs for CCDC124

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

Top

RelatedDiseases for CCDC124

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene