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Editing gene: LRRC37B (CAeditome ID:114659)

Gene summary for LRRC37B

Gene summary

Gene information	Gene symbol	LRRC37B
	Gene ID	114659
	Gene name	leucine rich repeat containing 37B
	Synonyms	LRRC37
	Cytomap	17q11.2
	Type of gene	protein-coding
	Description	leucine-rich repeat-containing protein 37BC66 SLIT-like testicular protein
	Modification date	20210518
	UniProtAcc	Q96QE4
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for LRRC37B

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000185158.11

RNA A-to-I editing events in Cancer.

CAediting_1180648(32009553, +), CAediting_1180649(32009656, +), CAediting_1180650(32009694, +), CAediting_1180651(32009926, +), CAediting_1180652(32017591, +), CAediting_1180653(32018104, +), CAediting_1180654(32018276, +), CAediting_1180655(32019876, +), CAediting_1180656(32019945, +), CAediting_1180657(32019952, +), CAediting_1180658(32019975, +), CAediting_1180659(32020079, +), CAediting_1180660(32026243, +), CAediting_1180661(32036022, +), CAediting_1180662(32036034, +), CAediting_1180663(32036051, +), CAediting_1180664(32036056, +), CAediting_1180665(32036058, +), CAediting_1180666(32036062, +), CAediting_1180667(32036070, +), CAediting_1180668(32036075, +), CAediting_1180669(32036078, +), CAediting_1180670(32036094, +), CAediting_1180671(32036100, +), CAediting_1180672(32036101, +), CAediting_1180673(32036118, +), CAediting_1180674(32036126, +), CAediting_1180675(32036127, +), CAediting_1180676(32036130, +), CAediting_1180677(32036137, +), CAediting_1180678(32036140, +), CAediting_1180679(32036175, +), CAediting_1180680(32036181, +), CAediting_1180681(32036184, +), CAediting_1180682(32036192, +), CAediting_1180683(32036198, +), CAediting_1180684(32036201, +), CAediting_1180685(32036212, +), CAediting_1180686(32036235, +), CAediting_1180687(32036236, +), CAediting_1180688(32036248, +), CAediting_1180689(32036263, +), CAediting_1180690(32036304, +), CAediting_1180691(32036320, +), CAediting_1180692(32037024, +), CAediting_1180693(32037035, +), CAediting_1180694(32037081, +), CAediting_1180695(32037181, +), CAediting_1180696(32037243, +), CAediting_1180697(32037255, +), CAediting_1180698(32037264, +), CAediting_1180699(32037302, +), CAediting_1180700(32037324, +), CAediting_1180701(32037327, +), CAediting_1180702(32037328, +), CAediting_1180703(32037383, +), CAediting_1180704(32037395, +), CAediting_1180705(32037396, +), CAediting_1180706(32037446, +), CAediting_1180707(32037449, +), CAediting_1180708(32037825, +), CAediting_1180709(32037830, +), CAediting_1180710(32037852, +), CAediting_1180711(32037853, +), CAediting_1180712(32037896, +), CAediting_1180713(32037905, +), CAediting_1180714(32037928, +), CAediting_1180715(32037930, +), CAediting_1180716(32037941, +), CAediting_1180717(32037980, +), CAediting_1180718(32037990, +), CAediting_1180719(32038182, +), CAediting_1180720(32038196, +), CAediting_1180721(32038231, +), CAediting_1180722(32038282, +), CAediting_1180723(32038283, +), CAediting_1180724(32038305, +), CAediting_1180725(32038348, +), CAediting_1180726(32038593, +), CAediting_1180727(32038595, +), CAediting_1180728(32038601, +), CAediting_1180729(32038605, +), CAediting_1180730(32038671, +), CAediting_1180731(32038678, +), CAediting_1180732(32038807, +), CAediting_1180733(32039247, +), CAediting_1180734(32039248, +), CAediting_1180735(32039251, +), CAediting_1180736(32040581, +), CAediting_1180737(32043375, +), CAediting_1180738(32043385, +), CAediting_1180739(32043486, +), CAediting_1180740(32044640, +), CAediting_1180741(32044641, +), CAediting_1180742(32051384, +), CAediting_1180743(32051488, +), CAediting_1180744(32052264, +), CAediting_1180745(32052265, +), CAediting_1180746(32052272, +), CAediting_1180747(32052285, +), CAediting_1180748(32052302, +), CAediting_1180749(32052358, +), CAediting_1180750(32052365, +), CAediting_1180751(32052367, +), CAediting_1180752(32052745, +), CAediting_1180753(32052824, +), CAediting_1180754(32052839, +),

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RNA editing positional annotations for LRRC37B using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1180648	chr17_32009553_+	ncRNA_intronic
CAediting_1180649	chr17_32009656_+	ncRNA_intronic
CAediting_1180650	chr17_32009694_+	ncRNA_intronic
CAediting_1180651	chr17_32009926_+	ncRNA_intronic
CAediting_1180652	chr17_32017591_+	intronic
CAediting_1180653	chr17_32018104_+	intronic
CAediting_1180654	chr17_32018276_+	intronic
CAediting_1180655	chr17_32019876_+	intronic
CAediting_1180656	chr17_32019945_+	intronic
CAediting_1180657	chr17_32019952_+	intronic
CAediting_1180658	chr17_32019975_+	intronic
CAediting_1180659	chr17_32020079_+	intronic
CAediting_1180660	chr17_32026243_+	ncRNA_intronic
CAediting_1180661	chr17_32036022_+	ncRNA_exonic;splicing
CAediting_1180662	chr17_32036034_+	ncRNA_exonic
CAediting_1180663	chr17_32036051_+	ncRNA_exonic
CAediting_1180664	chr17_32036056_+	ncRNA_exonic
CAediting_1180665	chr17_32036058_+	ncRNA_exonic
CAediting_1180666	chr17_32036062_+	ncRNA_exonic
CAediting_1180667	chr17_32036070_+	ncRNA_exonic
CAediting_1180668	chr17_32036075_+	ncRNA_exonic
CAediting_1180669	chr17_32036078_+	ncRNA_exonic
CAediting_1180670	chr17_32036094_+	ncRNA_exonic
CAediting_1180671	chr17_32036100_+	ncRNA_exonic
CAediting_1180672	chr17_32036101_+	ncRNA_exonic
CAediting_1180673	chr17_32036118_+	ncRNA_exonic
CAediting_1180674	chr17_32036126_+	ncRNA_exonic
CAediting_1180675	chr17_32036127_+	ncRNA_exonic
CAediting_1180676	chr17_32036130_+	ncRNA_exonic
CAediting_1180677	chr17_32036137_+	ncRNA_exonic
CAediting_1180678	chr17_32036140_+	ncRNA_exonic
CAediting_1180679	chr17_32036175_+	ncRNA_exonic
CAediting_1180680	chr17_32036181_+	ncRNA_exonic
CAediting_1180681	chr17_32036184_+	ncRNA_exonic
CAediting_1180682	chr17_32036192_+	ncRNA_exonic
CAediting_1180683	chr17_32036198_+	ncRNA_exonic
CAediting_1180684	chr17_32036201_+	ncRNA_exonic
CAediting_1180685	chr17_32036212_+	ncRNA_exonic
CAediting_1180686	chr17_32036235_+	ncRNA_exonic
CAediting_1180687	chr17_32036236_+	ncRNA_exonic
CAediting_1180688	chr17_32036248_+	ncRNA_exonic
CAediting_1180689	chr17_32036263_+	ncRNA_exonic
CAediting_1180690	chr17_32036304_+	ncRNA_intronic
CAediting_1180691	chr17_32036320_+	ncRNA_intronic
CAediting_1180692	chr17_32037024_+	ncRNA_intronic
CAediting_1180693	chr17_32037035_+	ncRNA_intronic
CAediting_1180694	chr17_32037081_+	ncRNA_intronic
CAediting_1180695	chr17_32037181_+	ncRNA_intronic
CAediting_1180696	chr17_32037243_+	ncRNA_intronic
CAediting_1180697	chr17_32037255_+	ncRNA_intronic
CAediting_1180698	chr17_32037264_+	ncRNA_intronic
CAediting_1180699	chr17_32037302_+	ncRNA_intronic
CAediting_1180700	chr17_32037324_+	ncRNA_intronic
CAediting_1180701	chr17_32037327_+	ncRNA_intronic
CAediting_1180702	chr17_32037328_+	ncRNA_intronic
CAediting_1180703	chr17_32037383_+	ncRNA_intronic
CAediting_1180704	chr17_32037395_+	ncRNA_intronic
CAediting_1180705	chr17_32037396_+	ncRNA_intronic
CAediting_1180706	chr17_32037446_+	ncRNA_intronic
CAediting_1180707	chr17_32037449_+	ncRNA_intronic
CAediting_1180708	chr17_32037825_+	ncRNA_intronic
CAediting_1180709	chr17_32037830_+	ncRNA_intronic
CAediting_1180710	chr17_32037852_+	ncRNA_intronic
CAediting_1180711	chr17_32037853_+	ncRNA_intronic
CAediting_1180712	chr17_32037896_+	ncRNA_intronic
CAediting_1180713	chr17_32037905_+	ncRNA_intronic
CAediting_1180714	chr17_32037928_+	ncRNA_intronic
CAediting_1180715	chr17_32037930_+	ncRNA_intronic
CAediting_1180716	chr17_32037941_+	ncRNA_intronic
CAediting_1180717	chr17_32037980_+	ncRNA_intronic
CAediting_1180718	chr17_32037990_+	ncRNA_intronic
CAediting_1180719	chr17_32038182_+	ncRNA_intronic
CAediting_1180720	chr17_32038196_+	ncRNA_intronic
CAediting_1180721	chr17_32038231_+	ncRNA_intronic
CAediting_1180722	chr17_32038282_+	ncRNA_intronic
CAediting_1180723	chr17_32038283_+	ncRNA_intronic
CAediting_1180724	chr17_32038305_+	ncRNA_intronic
CAediting_1180725	chr17_32038348_+	ncRNA_intronic
CAediting_1180726	chr17_32038593_+	ncRNA_intronic
CAediting_1180727	chr17_32038595_+	ncRNA_intronic
CAediting_1180728	chr17_32038601_+	ncRNA_intronic
CAediting_1180729	chr17_32038605_+	ncRNA_intronic
CAediting_1180730	chr17_32038671_+	ncRNA_intronic
CAediting_1180731	chr17_32038678_+	ncRNA_intronic
CAediting_1180732	chr17_32038807_+	ncRNA_intronic
CAediting_1180733	chr17_32039247_+	ncRNA_intronic
CAediting_1180734	chr17_32039248_+	ncRNA_intronic
CAediting_1180735	chr17_32039251_+	ncRNA_intronic
CAediting_1180736	chr17_32040581_+	ncRNA_exonic
CAediting_1180737	chr17_32043375_+	ncRNA_intronic
CAediting_1180738	chr17_32043385_+	ncRNA_intronic
CAediting_1180739	chr17_32043486_+	ncRNA_intronic
CAediting_1180740	chr17_32044640_+	ncRNA_intronic
CAediting_1180741	chr17_32044641_+	ncRNA_intronic
CAediting_1180742	chr17_32051384_+	ncRNA_exonic
CAediting_1180743	chr17_32051488_+	ncRNA_exonic
CAediting_1180744	chr17_32052264_+	ncRNA_exonic
CAediting_1180745	chr17_32052265_+	ncRNA_exonic
CAediting_1180746	chr17_32052272_+	ncRNA_exonic
CAediting_1180747	chr17_32052285_+	ncRNA_exonic
CAediting_1180748	chr17_32052302_+	ncRNA_exonic
CAediting_1180749	chr17_32052358_+	ncRNA_exonic
CAediting_1180750	chr17_32052365_+	ncRNA_exonic
CAediting_1180751	chr17_32052367_+	ncRNA_exonic
CAediting_1180752	chr17_32052745_+	ncRNA_exonic
CAediting_1180753	chr17_32052824_+	ncRNA_exonic
CAediting_1180754	chr17_32052839_+	ncRNA_exonic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1180648	chr17_32009553_+	SINE	Alu	AluJo
CAediting_1180649	chr17_32009656_+	SINE	Alu	AluJo
CAediting_1180650	chr17_32009694_+	SINE	Alu	AluJo
CAediting_1180651	chr17_32009926_+	SINE	Alu	AluJo
CAediting_1180652	chr17_32017591_+	SINE	Alu	AluJr
CAediting_1180653	chr17_32018104_+	SINE	Alu	AluSp
CAediting_1180654	chr17_32018276_+	SINE	Alu	AluSp
CAediting_1180655	chr17_32019876_+	SINE	Alu	AluSq2
CAediting_1180656	chr17_32019945_+	SINE	Alu	AluSq2
CAediting_1180657	chr17_32019952_+	SINE	Alu	AluSq2
CAediting_1180658	chr17_32019975_+	SINE	Alu	AluSq2
CAediting_1180659	chr17_32020079_+	SINE	Alu	AluSq2
CAediting_1180660	chr17_32026243_+	SINE	Alu	AluSx1
CAediting_1180661	chr17_32036022_+	SINE	Alu	AluSz
CAediting_1180662	chr17_32036034_+	SINE	Alu	AluSz
CAediting_1180663	chr17_32036051_+	SINE	Alu	AluSz
CAediting_1180664	chr17_32036056_+	SINE	Alu	AluSz
CAediting_1180665	chr17_32036058_+	SINE	Alu	AluSz
CAediting_1180666	chr17_32036062_+	SINE	Alu	AluSz
CAediting_1180667	chr17_32036070_+	SINE	Alu	AluSz
CAediting_1180668	chr17_32036075_+	SINE	Alu	AluSz
CAediting_1180669	chr17_32036078_+	SINE	Alu	AluSz
CAediting_1180670	chr17_32036094_+	SINE	Alu	AluSz
CAediting_1180671	chr17_32036100_+	SINE	Alu	AluSz
CAediting_1180672	chr17_32036101_+	SINE	Alu	AluSz
CAediting_1180673	chr17_32036118_+	SINE	Alu	AluSz
CAediting_1180674	chr17_32036126_+	SINE	Alu	AluSz
CAediting_1180675	chr17_32036127_+	SINE	Alu	AluSz
CAediting_1180676	chr17_32036130_+	SINE	Alu	AluSz
CAediting_1180677	chr17_32036137_+	SINE	Alu	AluSz
CAediting_1180678	chr17_32036140_+	SINE	Alu	AluSz
CAediting_1180679	chr17_32036175_+	SINE	Alu	AluSz
CAediting_1180680	chr17_32036181_+	SINE	Alu	AluSz
CAediting_1180681	chr17_32036184_+	SINE	Alu	AluSz
CAediting_1180682	chr17_32036192_+	SINE	Alu	AluSz
CAediting_1180683	chr17_32036198_+	SINE	Alu	AluSz
CAediting_1180684	chr17_32036201_+	SINE	Alu	AluSz
CAediting_1180685	chr17_32036212_+	SINE	Alu	AluSz
CAediting_1180686	chr17_32036235_+	SINE	Alu	AluSz
CAediting_1180687	chr17_32036236_+	SINE	Alu	AluSz
CAediting_1180688	chr17_32036248_+	SINE	Alu	AluSz
CAediting_1180689	chr17_32036263_+	SINE	Alu	AluSz
CAediting_1180690	chr17_32036304_+	LINE	L1	L1ME1
CAediting_1180691	chr17_32036320_+	LINE	L1	L1ME1
CAediting_1180692	chr17_32037024_+	SINE	Alu	AluSx1
CAediting_1180693	chr17_32037035_+	SINE	Alu	AluSx1
CAediting_1180694	chr17_32037081_+	SINE	Alu	AluSx1
CAediting_1180695	chr17_32037181_+	SINE	Alu	AluSx1
CAediting_1180696	chr17_32037243_+	SINE	Alu	AluSx1
CAediting_1180697	chr17_32037255_+	SINE	Alu	AluSx1
CAediting_1180698	chr17_32037264_+	SINE	Alu	AluSx1
CAediting_1180699	chr17_32037302_+	SINE	Alu	AluSx
CAediting_1180700	chr17_32037324_+	SINE	Alu	AluSx
CAediting_1180701	chr17_32037327_+	SINE	Alu	AluSx
CAediting_1180702	chr17_32037328_+	SINE	Alu	AluSx
CAediting_1180703	chr17_32037383_+	SINE	Alu	AluSx
CAediting_1180704	chr17_32037395_+	SINE	Alu	AluSx
CAediting_1180705	chr17_32037396_+	SINE	Alu	AluSx
CAediting_1180706	chr17_32037446_+	SINE	Alu	AluSx
CAediting_1180707	chr17_32037449_+	SINE	Alu	AluSx
CAediting_1180708	chr17_32037825_+	LINE	L1	L1ME1
CAediting_1180709	chr17_32037830_+	SINE	Alu	AluY
CAediting_1180710	chr17_32037852_+	SINE	Alu	AluY
CAediting_1180711	chr17_32037853_+	SINE	Alu	AluY
CAediting_1180712	chr17_32037896_+	SINE	Alu	AluY
CAediting_1180713	chr17_32037905_+	SINE	Alu	AluY
CAediting_1180714	chr17_32037928_+	SINE	Alu	AluY
CAediting_1180715	chr17_32037930_+	SINE	Alu	AluY
CAediting_1180716	chr17_32037941_+	SINE	Alu	AluY
CAediting_1180717	chr17_32037980_+	SINE	Alu	AluY
CAediting_1180718	chr17_32037990_+	SINE	Alu	AluY
CAediting_1180719	chr17_32038182_+	SINE	Alu	AluJb
CAediting_1180720	chr17_32038196_+	SINE	Alu	AluJb
CAediting_1180721	chr17_32038231_+	SINE	Alu	AluJb
CAediting_1180722	chr17_32038282_+	SINE	Alu	AluJb
CAediting_1180723	chr17_32038283_+	SINE	Alu	AluJb
CAediting_1180724	chr17_32038305_+	SINE	Alu	AluJb
CAediting_1180725	chr17_32038348_+	SINE	Alu	AluJb
CAediting_1180726	chr17_32038593_+	SINE	Alu	AluSz6
CAediting_1180727	chr17_32038595_+	SINE	Alu	AluSz6
CAediting_1180728	chr17_32038601_+	SINE	Alu	AluSz6
CAediting_1180729	chr17_32038605_+	SINE	Alu	AluSz6
CAediting_1180730	chr17_32038671_+	SINE	Alu	AluSz6
CAediting_1180731	chr17_32038678_+	SINE	Alu	AluSz6
CAediting_1180732	chr17_32038807_+	SINE	Alu	AluSz6
CAediting_1180733	chr17_32039247_+	SINE	Alu	AluJr
CAediting_1180734	chr17_32039248_+	SINE	Alu	AluJr
CAediting_1180735	chr17_32039251_+	SINE	Alu	AluJr
CAediting_1180737	chr17_32043375_+	SINE	Alu	AluJb
CAediting_1180738	chr17_32043385_+	SINE	Alu	AluJb
CAediting_1180739	chr17_32043486_+	SINE	Alu	AluJb
CAediting_1180740	chr17_32044640_+	SINE	Alu	AluJb
CAediting_1180741	chr17_32044641_+	SINE	Alu	AluJb
CAediting_1180742	chr17_32051384_+	SINE	Alu	AluY
CAediting_1180743	chr17_32051488_+	SINE	Alu	AluY
CAediting_1180744	chr17_32052264_+	SINE	Alu	AluJr4
CAediting_1180745	chr17_32052265_+	SINE	Alu	AluJr4
CAediting_1180746	chr17_32052272_+	SINE	Alu	AluJr4
CAediting_1180747	chr17_32052285_+	SINE	Alu	AluJr4
CAediting_1180748	chr17_32052302_+	SINE	Alu	AluJr4
CAediting_1180749	chr17_32052358_+	SINE	Alu	AluJr4
CAediting_1180750	chr17_32052365_+	SINE	Alu	AluJr4
CAediting_1180751	chr17_32052367_+	SINE	Alu	AluJr4
CAediting_1180752	chr17_32052745_+	SINE	Alu	AluJr
CAediting_1180753	chr17_32052824_+	SINE	Alu	AluJr
CAediting_1180754	chr17_32052839_+	SINE	Alu	AluJr

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RNA A-to-I editing events in the alternative splicing sites for LRRC37B

RNA A-to-I editing(s) in the alternative splicing sites.

AStype	CAeditomID	Editing position	AS position	AS direction	Exonic location	Wildtype sequence	Wildtype splicing strength	RNA edited sequence	RNA edited splicing strength
ES	CAediting_1180661	chr17_32036022_+	32036003:32036025	3SS	0+1i	TTGTTTTTTATTTTTTTTGAGAC	-5.11	TTGTTTTTTATTTTTTTTGGGAC	3.64
IR	CAediting_1180661	chr17_32036022_+	32036003:32036025	3SS	0+1i	TTGTTTTTTATTTTTTTTGAGAC	-5.11	TTGTTTTTTATTTTTTTTGGGAC	3.64
IR	CAediting_1180661	chr17_32036022_+	32036009:32036031	3SS	0+7i	TTTATTTTTTTTGAGACGGAGTC	-23.13	TTTATTTTTTTTGGGACGGAGTC	-20.65

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000185158.11.LRRC37B.

Correlation between RNA A-to-I editing and PSI for ENSG00000185158.11.LRRC37B.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for LRRC37B

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for LRRC37B

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for LRRC37B

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_688080	chr9_63819626_+	ENSG00000185158.11	ENST00000543378	hsa-miR-4477b	32053436	32053443	8mer-1a	32053421	32053443	142	-10.85
CAediting_688080	chr9_63819626_+	ENSG00000185158.11	ENST00000327564	hsa-miR-4477b	32053436	32053443	8mer-1a	32053421	32053443	142	-10.85
CAediting_846604	chr11_93733708_-	ENSG00000185158.11	ENST00000578674	hsa-miR-1304-3p	32049276	32049282	7mer-m8	32049260	32049283	147	-19.48
CAediting_688080	chr9_63819626_+	ENSG00000185158.11	ENST00000394713	hsa-miR-4477b	32053436	32053443	8mer-1a	32053421	32053443	142	-10.85
CAediting_688080	chr9_63819626_+	ENSG00000185158.11	ENST00000341671	hsa-miR-4477b	32053436	32053443	8mer-1a	32053421	32053443	142	-10.85
CAediting_1351755	chr19_40282625_-	ENSG00000185158.11	ENST00000578674	hsa-miR-641	32049172	32049179	8mer-1a	32049157	32049179	151	-15.9

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for LRRC37B

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

Top

Relation with ADAR for LRRC37B

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

Top

Relation with cancer stages for LRRC37B

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

Top

Relation with survival for LRRC37B

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
LAML	CAediting_1180681	chr17_32036184_+	0.00101550010037532	0.0139973	26.8997

Top

RelatedDrugs for LRRC37B

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

Top

RelatedDiseases for LRRC37B

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene