CAeditome Logo

Home

Download

Statistics

Examples

Help

Contact
Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: FAM83F (CAeditome ID:113828)

Gene summary for FAM83F

check button Gene summary
Gene informationGene symbol

FAM83F

Gene ID

113828

Gene namefamily with sequence similarity 83 member F
Synonyms-
Cytomap

22q13.1

Type of geneprotein-coding
Descriptionprotein FAM83F
Modification date20210518
UniProtAcc

Q8NEG4

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID

Top

RNA A-to-I events for FAM83F

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000133477.15
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_1483524(40010699, +), CAediting_1483525(40010725, +), CAediting_1483526(40012962, +), CAediting_1483527(40013008, +), CAediting_1483528(40024032, +), CAediting_1483529(40024033, +), CAediting_1483530(40024079, +), CAediting_1483531(40024080, +), CAediting_1483532(40024085, +), CAediting_1483533(40024086, +), CAediting_1483534(40024100, +), CAediting_1483535(40024104, +), CAediting_1483536(40024112, +), CAediting_1483537(40024174, +), CAediting_1483538(40024190, +), CAediting_1483539(40024230, +), CAediting_1483540(40024242, +), CAediting_1483541(40024259, +), CAediting_1483542(40024280, +), CAediting_1483543(40025156, +), CAediting_1483544(40025195, +), CAediting_1483545(40025325, +), CAediting_1483546(40025334, +), CAediting_1483547(40025590, +), CAediting_1483548(40025592, +), CAediting_1483549(40025602, +), CAediting_1483550(40025616, +), CAediting_1483551(40025619, +), CAediting_1483552(40025628, +), CAediting_1483553(40026257, +), CAediting_1483554(40026266, +), CAediting_1483555(40026274, +), CAediting_1483556(40026342, +), CAediting_1483557(40026365, +), CAediting_1483558(40026366, +), CAediting_1483559(40026369, +), CAediting_1483560(40026373, +), CAediting_1483561(40026399, +), CAediting_1483562(40026423, +), CAediting_1483563(40026426, +), CAediting_1483564(40026432, +), CAediting_1483565(40026441, +), CAediting_1483566(40026461, +), CAediting_1483567(40026475, +), CAediting_1483568(40026477, +), CAediting_1483569(40026521, +), CAediting_1483570(40026524, +), CAediting_1483571(40032587, +), CAediting_1483572(40032591, +), CAediting_1483573(40032611, +), CAediting_1483574(40032695, +), CAediting_1483575(40032698, +), CAediting_1483576(40032708, +), CAediting_1483577(40032768, +), CAediting_1483578(40032830, +), CAediting_1483579(40033109, +), CAediting_1483580(40033154, +), CAediting_1483581(40033164, +), CAediting_1483582(40033165, +), CAediting_1483583(40033202, +), CAediting_1483584(40033214, +), CAediting_1483585(40033224, +), CAediting_1483586(40033226, +), CAediting_1483587(40033230, +), CAediting_1483588(40033259, +), CAediting_1483589(40033265, +), CAediting_1483590(40033268, +), CAediting_1483591(40033272, +), CAediting_1483592(40033274, +), CAediting_1483593(40033282, +), CAediting_1483594(40033300, +), CAediting_1483595(40033319, +), CAediting_1483596(40033345, +), CAediting_1483597(40033359, +), CAediting_1483598(40033381, +), CAediting_1483599(40034449, +), CAediting_1483600(40036034, +), CAediting_1483601(40036035, +), CAediting_1483602(40036053, +), CAediting_1483603(40036069, +), CAediting_1483604(40036077, +), CAediting_1483605(40036093, +), CAediting_1483606(40036141, +), CAediting_1483607(40036157, +), CAediting_1483608(40036160, +), CAediting_1483609(40036176, +), CAediting_1483610(40036194, +), CAediting_1483611(40036213, +), CAediting_1483612(40036215, +), CAediting_1483613(40036239, +), CAediting_1483614(40036240, +), CAediting_1483615(40036244, +), CAediting_1483616(40036264, +), CAediting_1483617(40036269, +), CAediting_1483618(40036290, +), CAediting_1483619(40036291, +), CAediting_1483620(40036292, +), CAediting_1483621(40036304, +), CAediting_1483622(40036313, +), CAediting_1483623(40037094, +), CAediting_1483624(40037122, +), CAediting_1483625(40037125, +), CAediting_1483626(40037139, +), CAediting_1483627(40037152, +), CAediting_1483628(40037165, +), CAediting_1483629(40037172, +), CAediting_1483630(40037176, +), CAediting_1483631(40037185, +), CAediting_1483632(40037186, +), CAediting_1483633(40037196, +), CAediting_1483634(40037214, +), CAediting_1483635(40037216, +), CAediting_1483636(40037219, +), CAediting_1483637(40037221, +), CAediting_1483638(40037222, +), CAediting_1483639(40037225, +), CAediting_1483640(40037241, +), CAediting_1483641(40037251, +), CAediting_1483642(40037252, +), CAediting_1483643(40037257, +), CAediting_1483644(40037261, +), CAediting_1483645(40037283, +), CAediting_1483646(40037284, +), CAediting_1483647(40037291, +), CAediting_1483648(40037292, +), CAediting_1483649(40037313, +), CAediting_1483650(40037322, +), CAediting_1483651(40037327, +), CAediting_1483652(40037332, +), CAediting_1483653(40037351, +), CAediting_1483654(40037352, +), CAediting_1483655(40037761, +), CAediting_1483656(40037774, +), CAediting_1483657(40037777, +), CAediting_1483658(40037781, +), CAediting_1483659(40037782, +), CAediting_1483660(40037788, +), CAediting_1483661(40037792, +), CAediting_1483662(40037797, +), CAediting_1483663(40037798, +), CAediting_1483664(40037811, +), CAediting_1483665(40037817, +), CAediting_1483666(40037835, +), CAediting_1483667(40037843, +), CAediting_1483668(40037847, +), CAediting_1483669(40037857, +), CAediting_1483670(40037859, +), CAediting_1483671(40037867, +), CAediting_1483672(40037940, +), CAediting_1483673(40037952, +), CAediting_1483674(40037965, +), CAediting_1483675(40037970, +), CAediting_1483676(40037978, +), CAediting_1483677(40037979, +), CAediting_1483678(40037982, +), CAediting_1483679(40037992, +), CAediting_1483680(40039126, +), CAediting_1483681(40039176, +), CAediting_1483682(40039181, +), CAediting_1483683(40039246, +), CAediting_1483684(40039272, +), CAediting_1483685(40039287, +), CAediting_1483686(40041888, +), CAediting_1483687(40041901, +), CAediting_1483688(40041958, +), CAediting_1483689(40042076, +), CAediting_1483690(40042082, +), CAediting_1483691(40042144, +),

Top

RNA editing positional annotations for FAM83F using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_1483524chr22_40010699_+intronic
CAediting_1483525chr22_40010725_+intronic
CAediting_1483526chr22_40012962_+intronic
CAediting_1483527chr22_40013008_+intronic
CAediting_1483528chr22_40024032_+intronic
CAediting_1483529chr22_40024033_+intronic
CAediting_1483530chr22_40024079_+intronic
CAediting_1483531chr22_40024080_+intronic
CAediting_1483532chr22_40024085_+intronic
CAediting_1483533chr22_40024086_+intronic
CAediting_1483534chr22_40024100_+intronic
CAediting_1483535chr22_40024104_+intronic
CAediting_1483536chr22_40024112_+intronic
CAediting_1483537chr22_40024174_+intronic
CAediting_1483538chr22_40024190_+intronic
CAediting_1483539chr22_40024230_+intronic
CAediting_1483540chr22_40024242_+intronic
CAediting_1483541chr22_40024259_+intronic
CAediting_1483542chr22_40024280_+intronic
CAediting_1483543chr22_40025156_+intronic
CAediting_1483544chr22_40025195_+intronic
CAediting_1483545chr22_40025325_+intronic
CAediting_1483546chr22_40025334_+intronic
CAediting_1483547chr22_40025590_+intronic
CAediting_1483548chr22_40025592_+intronic
CAediting_1483549chr22_40025602_+intronic
CAediting_1483550chr22_40025616_+intronic
CAediting_1483551chr22_40025619_+intronic
CAediting_1483552chr22_40025628_+intronic
CAediting_1483553chr22_40026257_+intronic
CAediting_1483554chr22_40026266_+intronic
CAediting_1483555chr22_40026274_+intronic
CAediting_1483556chr22_40026342_+intronic
CAediting_1483557chr22_40026365_+intronic
CAediting_1483558chr22_40026366_+intronic
CAediting_1483559chr22_40026369_+intronic
CAediting_1483560chr22_40026373_+intronic
CAediting_1483561chr22_40026399_+intronic
CAediting_1483562chr22_40026423_+intronic
CAediting_1483563chr22_40026426_+intronic
CAediting_1483564chr22_40026432_+intronic
CAediting_1483565chr22_40026441_+intronic
CAediting_1483566chr22_40026461_+intronic
CAediting_1483567chr22_40026475_+intronic
CAediting_1483568chr22_40026477_+intronic
CAediting_1483569chr22_40026521_+intronic
CAediting_1483570chr22_40026524_+intronic
CAediting_1483571chr22_40032587_+UTR3
CAediting_1483572chr22_40032591_+UTR3
CAediting_1483573chr22_40032611_+UTR3
CAediting_1483574chr22_40032695_+UTR3
CAediting_1483575chr22_40032698_+UTR3
CAediting_1483576chr22_40032708_+UTR3
CAediting_1483577chr22_40032768_+UTR3
CAediting_1483578chr22_40032830_+UTR3
CAediting_1483579chr22_40033109_+UTR3
CAediting_1483580chr22_40033154_+UTR3
CAediting_1483581chr22_40033164_+UTR3
CAediting_1483582chr22_40033165_+UTR3
CAediting_1483583chr22_40033202_+UTR3
CAediting_1483584chr22_40033214_+UTR3
CAediting_1483585chr22_40033224_+UTR3
CAediting_1483586chr22_40033226_+UTR3
CAediting_1483587chr22_40033230_+UTR3
CAediting_1483588chr22_40033259_+UTR3
CAediting_1483589chr22_40033265_+UTR3
CAediting_1483590chr22_40033268_+UTR3
CAediting_1483591chr22_40033272_+UTR3
CAediting_1483592chr22_40033274_+UTR3
CAediting_1483593chr22_40033282_+UTR3
CAediting_1483594chr22_40033300_+UTR3
CAediting_1483595chr22_40033319_+UTR3
CAediting_1483596chr22_40033345_+UTR3
CAediting_1483597chr22_40033359_+UTR3
CAediting_1483598chr22_40033381_+UTR3
CAediting_1483599chr22_40034449_+UTR3
CAediting_1483600chr22_40036034_+UTR3
CAediting_1483601chr22_40036035_+UTR3
CAediting_1483602chr22_40036053_+UTR3
CAediting_1483603chr22_40036069_+UTR3
CAediting_1483604chr22_40036077_+UTR3
CAediting_1483605chr22_40036093_+UTR3
CAediting_1483606chr22_40036141_+UTR3
CAediting_1483607chr22_40036157_+UTR3
CAediting_1483608chr22_40036160_+UTR3
CAediting_1483609chr22_40036176_+UTR3
CAediting_1483610chr22_40036194_+UTR3
CAediting_1483611chr22_40036213_+UTR3
CAediting_1483612chr22_40036215_+UTR3
CAediting_1483613chr22_40036239_+UTR3
CAediting_1483614chr22_40036240_+UTR3
CAediting_1483615chr22_40036244_+UTR3
CAediting_1483616chr22_40036264_+UTR3
CAediting_1483617chr22_40036269_+UTR3
CAediting_1483618chr22_40036290_+UTR3
CAediting_1483619chr22_40036291_+UTR3
CAediting_1483620chr22_40036292_+UTR3
CAediting_1483621chr22_40036304_+UTR3
CAediting_1483622chr22_40036313_+UTR3
CAediting_1483623chr22_40037094_+UTR3
CAediting_1483624chr22_40037122_+UTR3
CAediting_1483625chr22_40037125_+UTR3
CAediting_1483626chr22_40037139_+UTR3
CAediting_1483627chr22_40037152_+UTR3
CAediting_1483628chr22_40037165_+UTR3
CAediting_1483629chr22_40037172_+UTR3
CAediting_1483630chr22_40037176_+UTR3
CAediting_1483631chr22_40037185_+UTR3
CAediting_1483632chr22_40037186_+UTR3
CAediting_1483633chr22_40037196_+UTR3
CAediting_1483634chr22_40037214_+UTR3
CAediting_1483635chr22_40037216_+UTR3
CAediting_1483636chr22_40037219_+UTR3
CAediting_1483637chr22_40037221_+UTR3
CAediting_1483638chr22_40037222_+UTR3
CAediting_1483639chr22_40037225_+UTR3
CAediting_1483640chr22_40037241_+UTR3
CAediting_1483641chr22_40037251_+UTR3
CAediting_1483642chr22_40037252_+UTR3
CAediting_1483643chr22_40037257_+UTR3
CAediting_1483644chr22_40037261_+UTR3
CAediting_1483645chr22_40037283_+UTR3
CAediting_1483646chr22_40037284_+UTR3
CAediting_1483647chr22_40037291_+UTR3
CAediting_1483648chr22_40037292_+UTR3
CAediting_1483649chr22_40037313_+UTR3
CAediting_1483650chr22_40037322_+UTR3
CAediting_1483651chr22_40037327_+UTR3
CAediting_1483652chr22_40037332_+UTR3
CAediting_1483653chr22_40037351_+UTR3
CAediting_1483654chr22_40037352_+UTR3
CAediting_1483655chr22_40037761_+UTR3
CAediting_1483656chr22_40037774_+UTR3
CAediting_1483657chr22_40037777_+UTR3
CAediting_1483658chr22_40037781_+UTR3
CAediting_1483659chr22_40037782_+UTR3
CAediting_1483660chr22_40037788_+UTR3
CAediting_1483661chr22_40037792_+UTR3
CAediting_1483662chr22_40037797_+UTR3
CAediting_1483663chr22_40037798_+UTR3
CAediting_1483664chr22_40037811_+UTR3
CAediting_1483665chr22_40037817_+UTR3
CAediting_1483666chr22_40037835_+UTR3
CAediting_1483667chr22_40037843_+UTR3
CAediting_1483668chr22_40037847_+UTR3
CAediting_1483669chr22_40037857_+UTR3
CAediting_1483670chr22_40037859_+UTR3
CAediting_1483671chr22_40037867_+UTR3
CAediting_1483672chr22_40037940_+UTR3
CAediting_1483673chr22_40037952_+UTR3
CAediting_1483674chr22_40037965_+UTR3
CAediting_1483675chr22_40037970_+UTR3
CAediting_1483676chr22_40037978_+UTR3
CAediting_1483677chr22_40037979_+UTR3
CAediting_1483678chr22_40037982_+UTR3
CAediting_1483679chr22_40037992_+UTR3
CAediting_1483680chr22_40039126_+UTR3
CAediting_1483681chr22_40039176_+UTR3
CAediting_1483682chr22_40039181_+UTR3
CAediting_1483683chr22_40039246_+UTR3
CAediting_1483684chr22_40039272_+UTR3
CAediting_1483685chr22_40039287_+UTR3
CAediting_1483686chr22_40041888_+UTR3
CAediting_1483687chr22_40041901_+UTR3
CAediting_1483688chr22_40041958_+UTR3
CAediting_1483689chr22_40042076_+UTR3
CAediting_1483690chr22_40042082_+UTR3
CAediting_1483691chr22_40042144_+UTR3

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_1483526chr22_40012962_+SINEAluAluY
CAediting_1483527chr22_40013008_+SINEAluAluY
CAediting_1483528chr22_40024032_+SINEAluAluJr
CAediting_1483529chr22_40024033_+SINEAluAluJr
CAediting_1483530chr22_40024079_+SINEAluAluJr
CAediting_1483531chr22_40024080_+SINEAluAluJr
CAediting_1483532chr22_40024085_+SINEAluAluJr
CAediting_1483533chr22_40024086_+SINEAluAluJr
CAediting_1483534chr22_40024100_+SINEAluAluJr
CAediting_1483535chr22_40024104_+SINEAluAluJr
CAediting_1483536chr22_40024112_+SINEAluAluJr
CAediting_1483537chr22_40024174_+SINEAluAluJr
CAediting_1483538chr22_40024190_+SINEAluAluJr
CAediting_1483539chr22_40024230_+SINEAluAluJr
CAediting_1483540chr22_40024242_+SINEAluAluJr
CAediting_1483541chr22_40024259_+SINEAluAluJr
CAediting_1483542chr22_40024280_+SINEAluAluJr
CAediting_1483543chr22_40025156_+SINEAluAluJo
CAediting_1483544chr22_40025195_+SINEAluAluJo
CAediting_1483545chr22_40025325_+SINEAluAluJo
CAediting_1483546chr22_40025334_+SINEAluAluJo
CAediting_1483547chr22_40025590_+SINEAluAluSx1
CAediting_1483548chr22_40025592_+SINEAluAluSx1
CAediting_1483549chr22_40025602_+SINEAluAluSx1
CAediting_1483550chr22_40025616_+SINEAluAluSx1
CAediting_1483551chr22_40025619_+SINEAluAluSx1
CAediting_1483552chr22_40025628_+SINEAluAluSx1
CAediting_1483553chr22_40026257_+SINEAluAluSc8
CAediting_1483554chr22_40026266_+SINEAluAluSc8
CAediting_1483555chr22_40026274_+SINEAluAluSc8
CAediting_1483556chr22_40026342_+SINEAluAluSc8
CAediting_1483557chr22_40026365_+SINEAluAluSc8
CAediting_1483558chr22_40026366_+SINEAluAluSc8
CAediting_1483559chr22_40026369_+SINEAluAluSc8
CAediting_1483560chr22_40026373_+SINEAluAluSc8
CAediting_1483561chr22_40026399_+SINEAluAluSc8
CAediting_1483562chr22_40026423_+SINEAluAluSc8
CAediting_1483563chr22_40026426_+SINEAluAluSc8
CAediting_1483564chr22_40026432_+SINEAluAluSc8
CAediting_1483565chr22_40026441_+SINEAluAluSc8
CAediting_1483566chr22_40026461_+SINEAluAluSc8
CAediting_1483567chr22_40026475_+SINEAluAluSc8
CAediting_1483568chr22_40026477_+SINEAluAluSc8
CAediting_1483569chr22_40026521_+SINEAluAluSc8
CAediting_1483570chr22_40026524_+SINEAluAluSc8
CAediting_1483571chr22_40032587_+SINEAluAluYj4
CAediting_1483572chr22_40032591_+SINEAluAluYj4
CAediting_1483573chr22_40032611_+SINEAluAluYj4
CAediting_1483574chr22_40032695_+SINEAluAluYj4
CAediting_1483575chr22_40032698_+SINEAluAluYj4
CAediting_1483576chr22_40032708_+SINEAluAluYj4
CAediting_1483577chr22_40032768_+SINEAluAluYj4
CAediting_1483578chr22_40032830_+SINEAluAluYj4
CAediting_1483579chr22_40033109_+SINEAluAluSx
CAediting_1483580chr22_40033154_+SINEAluAluSx
CAediting_1483581chr22_40033164_+SINEAluAluSx
CAediting_1483582chr22_40033165_+SINEAluAluSx
CAediting_1483583chr22_40033202_+SINEAluAluSx
CAediting_1483584chr22_40033214_+SINEAluAluSx
CAediting_1483585chr22_40033224_+SINEAluAluSx
CAediting_1483586chr22_40033226_+SINEAluAluSx
CAediting_1483587chr22_40033230_+SINEAluAluSx
CAediting_1483588chr22_40033259_+SINEAluAluSx
CAediting_1483589chr22_40033265_+SINEAluAluSx
CAediting_1483590chr22_40033268_+SINEAluAluSx
CAediting_1483591chr22_40033272_+SINEAluAluSx
CAediting_1483592chr22_40033274_+SINEAluAluSx
CAediting_1483593chr22_40033282_+SINEAluAluSx
CAediting_1483594chr22_40033300_+SINEAluAluSx
CAediting_1483595chr22_40033319_+SINEAluAluSx
CAediting_1483596chr22_40033345_+SINEAluAluSx
CAediting_1483597chr22_40033359_+SINEAluAluSx
CAediting_1483598chr22_40033381_+SINEAluAluSx
CAediting_1483600chr22_40036034_+SINEAluAluJr
CAediting_1483601chr22_40036035_+SINEAluAluJr
CAediting_1483602chr22_40036053_+SINEAluAluJr
CAediting_1483603chr22_40036069_+SINEAluAluJr
CAediting_1483604chr22_40036077_+SINEAluAluJr
CAediting_1483605chr22_40036093_+SINEAluAluJr
CAediting_1483606chr22_40036141_+SINEAluAluJr
CAediting_1483607chr22_40036157_+SINEAluAluJr
CAediting_1483608chr22_40036160_+SINEAluAluJr
CAediting_1483609chr22_40036176_+SINEAluAluJr
CAediting_1483610chr22_40036194_+SINEAluAluJr
CAediting_1483611chr22_40036213_+SINEAluAluJr
CAediting_1483612chr22_40036215_+SINEAluAluJr
CAediting_1483613chr22_40036239_+SINEAluAluJr
CAediting_1483614chr22_40036240_+SINEAluAluJr
CAediting_1483615chr22_40036244_+SINEAluAluJr
CAediting_1483616chr22_40036264_+SINEAluAluJr
CAediting_1483617chr22_40036269_+SINEAluAluJr
CAediting_1483618chr22_40036290_+SINEAluAluJr
CAediting_1483619chr22_40036291_+SINEAluAluJr
CAediting_1483620chr22_40036292_+SINEAluAluJr
CAediting_1483621chr22_40036304_+SINEAluAluJr
CAediting_1483622chr22_40036313_+SINEAluAluJr
CAediting_1483623chr22_40037094_+SINEAluAluSx
CAediting_1483624chr22_40037122_+SINEAluAluSx
CAediting_1483625chr22_40037125_+SINEAluAluSx
CAediting_1483626chr22_40037139_+SINEAluAluSx
CAediting_1483627chr22_40037152_+SINEAluAluSx
CAediting_1483628chr22_40037165_+SINEAluAluSx
CAediting_1483629chr22_40037172_+SINEAluAluSx
CAediting_1483630chr22_40037176_+SINEAluAluSx
CAediting_1483631chr22_40037185_+SINEAluAluSx
CAediting_1483632chr22_40037186_+SINEAluAluSx
CAediting_1483633chr22_40037196_+SINEAluAluSx
CAediting_1483634chr22_40037214_+SINEAluAluSx
CAediting_1483635chr22_40037216_+SINEAluAluSx
CAediting_1483636chr22_40037219_+SINEAluAluSx
CAediting_1483637chr22_40037221_+SINEAluAluSx
CAediting_1483638chr22_40037222_+SINEAluAluSx
CAediting_1483639chr22_40037225_+SINEAluAluSx
CAediting_1483640chr22_40037241_+SINEAluAluSx
CAediting_1483641chr22_40037251_+SINEAluAluSx
CAediting_1483642chr22_40037252_+SINEAluAluSx
CAediting_1483643chr22_40037257_+SINEAluAluSx
CAediting_1483644chr22_40037261_+SINEAluAluSx
CAediting_1483645chr22_40037283_+SINEAluAluSx
CAediting_1483646chr22_40037284_+SINEAluAluSx
CAediting_1483647chr22_40037291_+SINEAluAluSx
CAediting_1483648chr22_40037292_+SINEAluAluSx
CAediting_1483649chr22_40037313_+SINEAluAluSx
CAediting_1483650chr22_40037322_+SINEAluAluSx
CAediting_1483651chr22_40037327_+SINEAluAluSx
CAediting_1483652chr22_40037332_+SINEAluAluSx
CAediting_1483653chr22_40037351_+SINEAluAluSx
CAediting_1483654chr22_40037352_+SINEAluAluSx
CAediting_1483655chr22_40037761_+SINEAluAluJr
CAediting_1483656chr22_40037774_+SINEAluAluJr
CAediting_1483657chr22_40037777_+SINEAluAluJr
CAediting_1483658chr22_40037781_+SINEAluAluJr
CAediting_1483659chr22_40037782_+SINEAluAluJr
CAediting_1483660chr22_40037788_+SINEAluAluJr
CAediting_1483661chr22_40037792_+SINEAluAluJr
CAediting_1483662chr22_40037797_+SINEAluAluJr
CAediting_1483663chr22_40037798_+SINEAluAluJr
CAediting_1483664chr22_40037811_+SINEAluAluJr
CAediting_1483665chr22_40037817_+SINEAluAluJr
CAediting_1483666chr22_40037835_+SINEAluAluJr
CAediting_1483667chr22_40037843_+SINEAluAluJr
CAediting_1483668chr22_40037847_+SINEAluAluJr
CAediting_1483669chr22_40037857_+SINEAluAluJr
CAediting_1483670chr22_40037859_+SINEAluAluJr
CAediting_1483671chr22_40037867_+SINEAluAluJr
CAediting_1483672chr22_40037940_+SINEAluAluJr
CAediting_1483673chr22_40037952_+SINEAluAluJr
CAediting_1483674chr22_40037965_+SINEAluAluJr
CAediting_1483675chr22_40037970_+SINEAluAluJr
CAediting_1483676chr22_40037978_+SINEAluAluJr
CAediting_1483677chr22_40037979_+SINEAluAluJr
CAediting_1483678chr22_40037982_+SINEAluAluJr
CAediting_1483679chr22_40037992_+SINEAluAluJr
CAediting_1483680chr22_40039126_+SINEAluAluSg
CAediting_1483681chr22_40039176_+SINEAluAluSg
CAediting_1483682chr22_40039181_+SINEAluAluSg
CAediting_1483683chr22_40039246_+SINEAluAluSg
CAediting_1483684chr22_40039272_+SINEAluAluSg
CAediting_1483685chr22_40039287_+SINEAluAluSg
CAediting_1483686chr22_40041888_+SINEAluAluJr
CAediting_1483687chr22_40041901_+SINEAluAluJr
CAediting_1483688chr22_40041958_+SINEAluAluJr
CAediting_1483689chr22_40042076_+SINEAluAluJr
CAediting_1483690chr22_40042082_+SINEAluAluJr
CAediting_1483691chr22_40042144_+SINEAluAluJr

Top

RNA A-to-I editing events in the alternative splicing sites for FAM83F

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength
IRCAediting_1483610chr22_40036194_+40036194:400362163SS0+20iATTTTCAATATTTTTTTGTAGAG-15.16GTTTTCAATATTTTTTTGTAGAG-15.15
IRCAediting_1483611chr22_40036213_+40036194:400362163SS0+1iATTTTCAATATTTTTTTGTAGAG-15.16ATTTTCAATATTTTTTTGTGGAG-6.41
IRCAediting_1483612chr22_40036215_+40036194:400362163SS2+0iATTTTCAATATTTTTTTGTAGAG-15.16ATTTTCAATATTTTTTTGTAGGG-20.46

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000133477.15.FAM83F.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000133477.15.FAM83F.

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for FAM83F

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

Top

Protein coding region RNA A-to-I editings for FAM83F

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


Top

The effects of the RNA editing to the miRNA binding sites for FAM83F

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_86358chr1_109598906_+ENSG00000133477.15ENST00000473717hsa-miR-197-5p40029986400299927mer-1a4002997040029992145-34.23

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for FAM83F

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

Top

Relation with ADAR for FAM83F

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
BRCACAediting_1483614chr22_40036240_+0.01376223368414320.1400149929326980.001187041759319780.183603388392927..
BLCACAediting_1483615chr22_40036244_+0.001340917807866640.395370912099816..0.001725753724677730.387056895073659
BRCACAediting_1483615chr22_40036244_+0.008694478181613260.130710340644458....
CESCCAediting_1483615chr22_40036244_+0.03075794879903830.248015689186229....
THCACAediting_1483615chr22_40036244_+0.007527261434534220.220352030066583....
ESCACAediting_1483615chr22_40036244_+0.0131121311070020.2780072126057550.01369315484581440.27633902350967..
THCACAediting_1483642chr22_40037252_+0.04389714464417530.248875721360345....
ESCACAediting_1483658chr22_40037781_+0.003465758662162240.340108925072385....
BRCACAediting_1483660chr22_40037788_+..0.02904707565530910.261058247588468..
BRCACAediting_1483673chr22_40037952_+..0.03356056486754940.249112629481964..
BRCACAediting_1483675chr22_40037970_+0.0005909878970533550.280071130086022....

Top

Relation with cancer stages for FAM83F

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.
BRCApathologic_stageCAediting_1483615chr22_40036244_+0.04415129100452840.101845442347065
ESCApathologic_stageCAediting_1483614chr22_40036240_+0.0360321458306570.266845571679548

Top

Relation with survival for FAM83F

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR
BLCACAediting_1483615chr22_40036244_+0.006120424319890460.04321071.14615e-06

Top

RelatedDrugs for FAM83F

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

Top

RelatedDiseases for FAM83F

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource