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Editing gene: COPE (CAeditome ID:11316)

Gene summary for COPE

Gene summary

Gene information	Gene symbol	COPE
	Gene ID	11316
	Gene name	COPI coat complex subunit epsilon
	Synonyms	epsilon-COP
	Cytomap	19p13.11
	Type of gene	protein-coding
	Description	coatomer subunit epsiloncoatomer epsilon subunitcoatomer protein complex subunit epsilonepsilon coat protein
	Modification date	20210518
	UniProtAcc	O14579
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
COPE	GO:0005654	Coatomer subunit epsilon	0000052
COPE	GO:0005794	Coatomer subunit epsilon	0000052
COPE	GO:0005794	Coatomer subunit epsilon	0000054

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RNA A-to-I events for COPE

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000105669.11

RNA A-to-I editing events in Cancer.

CAediting_1320323(18901991, -), CAediting_1320324(18902462, -), CAediting_1320325(18904034, -), CAediting_1320326(18906194, -), CAediting_1320327(18906287, -), CAediting_1320328(18906301, -), CAediting_1320329(18906304, -), CAediting_1320330(18906322, -), CAediting_1320331(18906330, -), CAediting_1320332(18906334, -), CAediting_1320333(18906430, -), CAediting_1320334(18907283, -), CAediting_1320335(18907631, -), CAediting_1320336(18908157, -), CAediting_1320337(18908175, -), CAediting_1320338(18908187, -), CAediting_1320339(18908188, -), CAediting_1320340(18908189, -), CAediting_1320341(18908211, -), CAediting_1320342(18908237, -), CAediting_1320343(18908259, -), CAediting_1320344(18908261, -), CAediting_1320345(18908264, -), CAediting_1320346(18908287, -), CAediting_1320347(18908303, -), CAediting_1320348(18908315, -), CAediting_1320349(18908318, -), CAediting_1320350(18908319, -), CAediting_1320351(18908327, -), CAediting_1320352(18908340, -), CAediting_1320353(18908344, -), CAediting_1320354(18908345, -), CAediting_1320355(18908358, -), CAediting_1320356(18908365, -), CAediting_1320357(18908370, -), CAediting_1320358(18908375, -), CAediting_1320359(18908377, -), CAediting_1320360(18908387, -), CAediting_1320361(18908405, -), CAediting_1320362(18908423, -), CAediting_1320363(18908482, -), CAediting_1320364(18908584, -), CAediting_1320365(18908649, -), CAediting_1320366(18908655, -), CAediting_1320367(18908673, -), CAediting_1320368(18908681, -), CAediting_1320369(18908684, -), CAediting_1320370(18908685, -), CAediting_1320371(18908699, -), CAediting_1320372(18908702, -), CAediting_1320373(18908720, -), CAediting_1320374(18908789, -), CAediting_1320375(18908790, -), CAediting_1320376(18908796, -), CAediting_1320377(18908841, -), CAediting_1320378(18908843, -), CAediting_1320379(18908870, -), CAediting_1320380(18908874, -), CAediting_1320381(18908879, -), CAediting_1320382(18908886, -), CAediting_1320383(18908888, -), CAediting_1320384(18908898, -), CAediting_1320385(18908903, -), CAediting_1320386(18908916, -), CAediting_1320387(18908922, -), CAediting_1320388(18908936, -), CAediting_1320389(18908941, -), CAediting_1320390(18908951, -), CAediting_1320391(18908952, -), CAediting_1320392(18908954, -), CAediting_1320393(18908960, -), CAediting_1320394(18908962, -), CAediting_1320395(18908996, -), CAediting_1320396(18909303, -), CAediting_1320397(18909483, -), CAediting_1320398(18909515, -), CAediting_1320399(18909586, -), CAediting_1320400(18909587, -), CAediting_1320401(18909595, -), CAediting_1320402(18909602, -), CAediting_1320403(18909604, -), CAediting_1320404(18909615, -), CAediting_1320405(18909616, -), CAediting_1320406(18909624, -), CAediting_1320407(18909625, -), CAediting_1320408(18909630, -), CAediting_1320409(18909634, -), CAediting_1320410(18909651, -), CAediting_1320411(18909656, -), CAediting_1320412(18909665, -), CAediting_1320413(18909675, -), CAediting_1320414(18909676, -), CAediting_1320415(18909684, -), CAediting_1320416(18909686, -), CAediting_1320417(18909687, -), CAediting_1320418(18909690, -), CAediting_1320419(18909693, -), CAediting_1320420(18909699, -), CAediting_1320421(18909704, -), CAediting_1320422(18909706, -), CAediting_1320423(18909729, -), CAediting_1320424(18909730, -), CAediting_1320425(18909740, -), CAediting_1320426(18909750, -), CAediting_1320427(18909755, -), CAediting_1320428(18909777, -), CAediting_1320429(18909780, -), CAediting_1320430(18909785, -), CAediting_1320431(18909786, -), CAediting_1320432(18909792, -), CAediting_1320433(18909794, -), CAediting_1320434(18909802, -), CAediting_1320435(18910369, -), CAediting_1320436(18910374, -), CAediting_1320437(18910406, -), CAediting_1320438(18910420, -), CAediting_1320439(18910423, -), CAediting_1320440(18910436, -), CAediting_1320441(18910473, -), CAediting_1320442(18910485, -), CAediting_1320443(18910503, -), CAediting_1320444(18910522, -), CAediting_1320445(18910523, -), CAediting_1320446(18910540, -), CAediting_1320447(18910560, -), CAediting_1320448(18910571, -), CAediting_1320449(18911587, -), CAediting_1320450(18911690, -), CAediting_1320451(18911755, -), CAediting_1320452(18911962, -), CAediting_1320453(18911988, -), CAediting_1320454(18911989, -), CAediting_1320455(18912225, -), CAediting_1320456(18912258, -), CAediting_1320457(18912285, -), CAediting_1320458(18912311, -), CAediting_1320459(18912312, -), CAediting_1320460(18912705, -), CAediting_1320461(18914283, -), CAediting_1320462(18914295, -), CAediting_1320463(18914310, -), CAediting_1320464(18914314, -), CAediting_1320465(18914321, -), CAediting_1320466(18914348, -), CAediting_1320467(18914378, -), CAediting_1320468(18914429, -), CAediting_1320469(18914459, -), CAediting_1320470(18914479, -), CAediting_1320471(18914481, -), CAediting_1320472(18914484, -), CAediting_1320473(18914802, -), CAediting_1320474(18914818, -), CAediting_1320475(18914833, -), CAediting_1320476(18914849, -), CAediting_1320477(18914854, -), CAediting_1320478(18914863, -), CAediting_1320479(18914864, -), CAediting_1320480(18914868, -), CAediting_1320481(18914878, -), CAediting_1320482(18914895, -), CAediting_1320483(18914901, -), CAediting_1320484(18914921, -), CAediting_1320485(18914922, -), CAediting_1320486(18914955, -), CAediting_1320487(18914993, -), CAediting_1320488(18914998, -), CAediting_1320489(18915007, -), CAediting_1320490(18915084, -), CAediting_1320491(18915086, -), CAediting_1320492(18915146, -), CAediting_1320493(18915156, -), CAediting_1320494(18916301, -), CAediting_1320495(18916497, -), CAediting_1320496(18916531, -), CAediting_1320497(18916837, -), CAediting_1320498(18916845, -), CAediting_1320499(18916931, -), CAediting_1320500(18917376, -), CAediting_1320501(18917403, -), CAediting_1320502(18917416, -), CAediting_1320503(18917436, -), CAediting_1320504(18917437, -), CAediting_1320505(18917461, -), CAediting_1320506(18917465, -), CAediting_1320507(18917480, -), CAediting_1320508(18917484, -), CAediting_1320509(18917507, -), CAediting_1320510(18917524, -), CAediting_1320511(18917532, -), CAediting_1320512(18917535, -), CAediting_1320513(18917536, -), CAediting_1320514(18917537, -), CAediting_1320515(18917543, -), CAediting_1320516(18917544, -), CAediting_1320517(18917551, -), CAediting_1320518(18917596, -), CAediting_1320519(18917636, -), CAediting_1320520(18917642, -), CAediting_1320521(18918026, -), CAediting_1320522(18918040, -), CAediting_1320523(18918066, -), CAediting_1320524(18918068, -), CAediting_1320525(18918104, -), CAediting_1320526(18918107, -), CAediting_1320527(18918108, -), CAediting_1320528(18918114, -), CAediting_1320529(18918574, -), CAediting_1320530(18918601, -), CAediting_1320531(18918702, -),

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RNA editing positional annotations for COPE using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1320323	chr19_18901991_-	ncRNA_intronic
CAediting_1320324	chr19_18902462_-	ncRNA_intronic
CAediting_1320325	chr19_18904034_-	ncRNA_intronic
CAediting_1320326	chr19_18906194_-	ncRNA_exonic
CAediting_1320327	chr19_18906287_-	ncRNA_intronic
CAediting_1320328	chr19_18906301_-	ncRNA_intronic
CAediting_1320329	chr19_18906304_-	ncRNA_intronic
CAediting_1320330	chr19_18906322_-	ncRNA_intronic
CAediting_1320331	chr19_18906330_-	ncRNA_intronic
CAediting_1320332	chr19_18906334_-	ncRNA_intronic
CAediting_1320333	chr19_18906430_-	ncRNA_intronic
CAediting_1320334	chr19_18907283_-	ncRNA_intronic
CAediting_1320335	chr19_18907631_-	ncRNA_intronic
CAediting_1320336	chr19_18908157_-	ncRNA_intronic
CAediting_1320337	chr19_18908175_-	ncRNA_intronic
CAediting_1320338	chr19_18908187_-	ncRNA_intronic
CAediting_1320339	chr19_18908188_-	ncRNA_intronic
CAediting_1320340	chr19_18908189_-	ncRNA_intronic
CAediting_1320341	chr19_18908211_-	ncRNA_intronic
CAediting_1320342	chr19_18908237_-	ncRNA_intronic
CAediting_1320343	chr19_18908259_-	ncRNA_intronic
CAediting_1320344	chr19_18908261_-	ncRNA_intronic
CAediting_1320345	chr19_18908264_-	ncRNA_intronic
CAediting_1320346	chr19_18908287_-	ncRNA_intronic
CAediting_1320347	chr19_18908303_-	ncRNA_intronic
CAediting_1320348	chr19_18908315_-	ncRNA_intronic
CAediting_1320349	chr19_18908318_-	ncRNA_intronic
CAediting_1320350	chr19_18908319_-	ncRNA_intronic
CAediting_1320351	chr19_18908327_-	ncRNA_intronic
CAediting_1320352	chr19_18908340_-	ncRNA_intronic
CAediting_1320353	chr19_18908344_-	ncRNA_intronic
CAediting_1320354	chr19_18908345_-	ncRNA_intronic
CAediting_1320355	chr19_18908358_-	ncRNA_intronic
CAediting_1320356	chr19_18908365_-	ncRNA_intronic
CAediting_1320357	chr19_18908370_-	ncRNA_intronic
CAediting_1320358	chr19_18908375_-	ncRNA_intronic
CAediting_1320359	chr19_18908377_-	ncRNA_intronic
CAediting_1320360	chr19_18908387_-	ncRNA_intronic
CAediting_1320361	chr19_18908405_-	ncRNA_intronic
CAediting_1320362	chr19_18908423_-	ncRNA_intronic
CAediting_1320363	chr19_18908482_-	ncRNA_intronic
CAediting_1320364	chr19_18908584_-	ncRNA_intronic
CAediting_1320365	chr19_18908649_-	ncRNA_intronic
CAediting_1320366	chr19_18908655_-	ncRNA_intronic
CAediting_1320367	chr19_18908673_-	ncRNA_intronic
CAediting_1320368	chr19_18908681_-	ncRNA_intronic
CAediting_1320369	chr19_18908684_-	ncRNA_intronic
CAediting_1320370	chr19_18908685_-	ncRNA_intronic
CAediting_1320371	chr19_18908699_-	ncRNA_intronic
CAediting_1320372	chr19_18908702_-	ncRNA_intronic
CAediting_1320373	chr19_18908720_-	ncRNA_intronic
CAediting_1320374	chr19_18908789_-	ncRNA_intronic
CAediting_1320375	chr19_18908790_-	ncRNA_intronic
CAediting_1320376	chr19_18908796_-	ncRNA_intronic
CAediting_1320377	chr19_18908841_-	ncRNA_intronic
CAediting_1320378	chr19_18908843_-	ncRNA_intronic
CAediting_1320379	chr19_18908870_-	ncRNA_intronic
CAediting_1320380	chr19_18908874_-	ncRNA_intronic
CAediting_1320381	chr19_18908879_-	ncRNA_intronic
CAediting_1320382	chr19_18908886_-	ncRNA_intronic
CAediting_1320383	chr19_18908888_-	ncRNA_intronic
CAediting_1320384	chr19_18908898_-	ncRNA_intronic
CAediting_1320385	chr19_18908903_-	ncRNA_intronic
CAediting_1320386	chr19_18908916_-	ncRNA_intronic
CAediting_1320387	chr19_18908922_-	ncRNA_intronic
CAediting_1320388	chr19_18908936_-	ncRNA_intronic
CAediting_1320389	chr19_18908941_-	ncRNA_intronic
CAediting_1320390	chr19_18908951_-	ncRNA_intronic
CAediting_1320391	chr19_18908952_-	ncRNA_intronic
CAediting_1320392	chr19_18908954_-	ncRNA_intronic
CAediting_1320393	chr19_18908960_-	ncRNA_intronic
CAediting_1320394	chr19_18908962_-	ncRNA_intronic
CAediting_1320395	chr19_18908996_-	ncRNA_intronic
CAediting_1320396	chr19_18909303_-	ncRNA_intronic
CAediting_1320397	chr19_18909483_-	ncRNA_intronic
CAediting_1320398	chr19_18909515_-	ncRNA_intronic
CAediting_1320399	chr19_18909586_-	ncRNA_intronic
CAediting_1320400	chr19_18909587_-	ncRNA_intronic
CAediting_1320401	chr19_18909595_-	ncRNA_intronic
CAediting_1320402	chr19_18909602_-	ncRNA_intronic
CAediting_1320403	chr19_18909604_-	ncRNA_intronic
CAediting_1320404	chr19_18909615_-	ncRNA_intronic
CAediting_1320405	chr19_18909616_-	ncRNA_intronic
CAediting_1320406	chr19_18909624_-	ncRNA_intronic
CAediting_1320407	chr19_18909625_-	ncRNA_intronic
CAediting_1320408	chr19_18909630_-	ncRNA_intronic
CAediting_1320409	chr19_18909634_-	ncRNA_intronic
CAediting_1320410	chr19_18909651_-	ncRNA_intronic
CAediting_1320411	chr19_18909656_-	ncRNA_intronic
CAediting_1320412	chr19_18909665_-	ncRNA_intronic
CAediting_1320413	chr19_18909675_-	ncRNA_intronic
CAediting_1320414	chr19_18909676_-	ncRNA_intronic
CAediting_1320415	chr19_18909684_-	ncRNA_intronic
CAediting_1320416	chr19_18909686_-	ncRNA_intronic
CAediting_1320417	chr19_18909687_-	ncRNA_intronic
CAediting_1320418	chr19_18909690_-	ncRNA_intronic
CAediting_1320419	chr19_18909693_-	ncRNA_intronic
CAediting_1320420	chr19_18909699_-	ncRNA_intronic
CAediting_1320421	chr19_18909704_-	ncRNA_intronic
CAediting_1320422	chr19_18909706_-	ncRNA_intronic
CAediting_1320423	chr19_18909729_-	ncRNA_intronic
CAediting_1320424	chr19_18909730_-	ncRNA_intronic
CAediting_1320425	chr19_18909740_-	ncRNA_intronic
CAediting_1320426	chr19_18909750_-	ncRNA_intronic
CAediting_1320427	chr19_18909755_-	ncRNA_intronic
CAediting_1320428	chr19_18909777_-	ncRNA_intronic
CAediting_1320429	chr19_18909780_-	ncRNA_intronic
CAediting_1320430	chr19_18909785_-	ncRNA_intronic
CAediting_1320431	chr19_18909786_-	ncRNA_intronic
CAediting_1320432	chr19_18909792_-	ncRNA_intronic
CAediting_1320433	chr19_18909794_-	ncRNA_intronic
CAediting_1320434	chr19_18909802_-	ncRNA_intronic
CAediting_1320435	chr19_18910369_-	ncRNA_intronic
CAediting_1320436	chr19_18910374_-	ncRNA_intronic
CAediting_1320437	chr19_18910406_-	ncRNA_intronic
CAediting_1320438	chr19_18910420_-	ncRNA_intronic
CAediting_1320439	chr19_18910423_-	ncRNA_intronic
CAediting_1320440	chr19_18910436_-	ncRNA_intronic
CAediting_1320441	chr19_18910473_-	ncRNA_intronic
CAediting_1320442	chr19_18910485_-	ncRNA_intronic
CAediting_1320443	chr19_18910503_-	ncRNA_intronic
CAediting_1320444	chr19_18910522_-	ncRNA_intronic
CAediting_1320445	chr19_18910523_-	ncRNA_intronic
CAediting_1320446	chr19_18910540_-	ncRNA_intronic
CAediting_1320447	chr19_18910560_-	ncRNA_exonic
CAediting_1320448	chr19_18910571_-	ncRNA_exonic
CAediting_1320449	chr19_18911587_-	ncRNA_intronic
CAediting_1320450	chr19_18911690_-	ncRNA_intronic
CAediting_1320451	chr19_18911755_-	ncRNA_intronic
CAediting_1320452	chr19_18911962_-	ncRNA_intronic
CAediting_1320453	chr19_18911988_-	ncRNA_intronic
CAediting_1320454	chr19_18911989_-	ncRNA_intronic
CAediting_1320455	chr19_18912225_-	ncRNA_intronic
CAediting_1320456	chr19_18912258_-	ncRNA_intronic
CAediting_1320457	chr19_18912285_-	ncRNA_intronic
CAediting_1320458	chr19_18912311_-	ncRNA_intronic
CAediting_1320459	chr19_18912312_-	ncRNA_intronic
CAediting_1320460	chr19_18912705_-	ncRNA_intronic
CAediting_1320461	chr19_18914283_-	ncRNA_intronic
CAediting_1320462	chr19_18914295_-	ncRNA_intronic
CAediting_1320463	chr19_18914310_-	ncRNA_intronic
CAediting_1320464	chr19_18914314_-	ncRNA_intronic
CAediting_1320465	chr19_18914321_-	ncRNA_intronic
CAediting_1320466	chr19_18914348_-	ncRNA_intronic
CAediting_1320467	chr19_18914378_-	ncRNA_intronic
CAediting_1320468	chr19_18914429_-	ncRNA_intronic
CAediting_1320469	chr19_18914459_-	ncRNA_intronic
CAediting_1320470	chr19_18914479_-	ncRNA_intronic
CAediting_1320471	chr19_18914481_-	ncRNA_intronic
CAediting_1320472	chr19_18914484_-	ncRNA_intronic
CAediting_1320473	chr19_18914802_-	ncRNA_intronic
CAediting_1320474	chr19_18914818_-	ncRNA_intronic
CAediting_1320475	chr19_18914833_-	ncRNA_intronic
CAediting_1320476	chr19_18914849_-	ncRNA_intronic
CAediting_1320477	chr19_18914854_-	ncRNA_intronic
CAediting_1320478	chr19_18914863_-	ncRNA_intronic
CAediting_1320479	chr19_18914864_-	ncRNA_intronic
CAediting_1320480	chr19_18914868_-	ncRNA_intronic
CAediting_1320481	chr19_18914878_-	ncRNA_intronic
CAediting_1320482	chr19_18914895_-	ncRNA_intronic
CAediting_1320483	chr19_18914901_-	ncRNA_intronic
CAediting_1320484	chr19_18914921_-	ncRNA_intronic
CAediting_1320485	chr19_18914922_-	ncRNA_intronic
CAediting_1320486	chr19_18914955_-	ncRNA_intronic
CAediting_1320487	chr19_18914993_-	ncRNA_intronic
CAediting_1320488	chr19_18914998_-	ncRNA_intronic
CAediting_1320489	chr19_18915007_-	ncRNA_intronic
CAediting_1320490	chr19_18915084_-	ncRNA_intronic
CAediting_1320491	chr19_18915086_-	ncRNA_intronic
CAediting_1320492	chr19_18915146_-	ncRNA_intronic
CAediting_1320493	chr19_18915156_-	ncRNA_intronic
CAediting_1320494	chr19_18916301_-	ncRNA_intronic
CAediting_1320495	chr19_18916497_-	ncRNA_intronic
CAediting_1320496	chr19_18916531_-	ncRNA_intronic
CAediting_1320497	chr19_18916837_-	ncRNA_intronic
CAediting_1320498	chr19_18916845_-	ncRNA_intronic
CAediting_1320499	chr19_18916931_-	ncRNA_intronic
CAediting_1320500	chr19_18917376_-	ncRNA_intronic
CAediting_1320501	chr19_18917403_-	ncRNA_intronic
CAediting_1320502	chr19_18917416_-	ncRNA_intronic
CAediting_1320503	chr19_18917436_-	ncRNA_intronic
CAediting_1320504	chr19_18917437_-	ncRNA_intronic
CAediting_1320505	chr19_18917461_-	ncRNA_intronic
CAediting_1320506	chr19_18917465_-	ncRNA_intronic
CAediting_1320507	chr19_18917480_-	ncRNA_intronic
CAediting_1320508	chr19_18917484_-	ncRNA_intronic
CAediting_1320509	chr19_18917507_-	ncRNA_intronic
CAediting_1320510	chr19_18917524_-	ncRNA_intronic
CAediting_1320511	chr19_18917532_-	ncRNA_intronic
CAediting_1320512	chr19_18917535_-	ncRNA_intronic
CAediting_1320513	chr19_18917536_-	ncRNA_intronic
CAediting_1320514	chr19_18917537_-	ncRNA_intronic
CAediting_1320515	chr19_18917543_-	ncRNA_intronic
CAediting_1320516	chr19_18917544_-	ncRNA_intronic
CAediting_1320517	chr19_18917551_-	ncRNA_intronic
CAediting_1320518	chr19_18917596_-	ncRNA_intronic
CAediting_1320519	chr19_18917636_-	ncRNA_intronic
CAediting_1320520	chr19_18917642_-	ncRNA_intronic
CAediting_1320521	chr19_18918026_-	ncRNA_intronic
CAediting_1320522	chr19_18918040_-	ncRNA_intronic
CAediting_1320523	chr19_18918066_-	ncRNA_intronic
CAediting_1320524	chr19_18918068_-	ncRNA_intronic
CAediting_1320525	chr19_18918104_-	ncRNA_intronic
CAediting_1320526	chr19_18918107_-	ncRNA_intronic
CAediting_1320527	chr19_18918108_-	ncRNA_intronic
CAediting_1320528	chr19_18918114_-	ncRNA_intronic
CAediting_1320529	chr19_18918574_-	ncRNA_intronic
CAediting_1320530	chr19_18918601_-	ncRNA_intronic
CAediting_1320531	chr19_18918702_-	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1320323	chr19_18901991_-	SINE	Alu	AluY
CAediting_1320324	chr19_18902462_-	SINE	Alu	AluSx1
CAediting_1320325	chr19_18904034_-	SINE	Alu	AluSp
CAediting_1320326	chr19_18906194_-	SINE	Alu	AluJb
CAediting_1320327	chr19_18906287_-	SINE	Alu	AluJb
CAediting_1320328	chr19_18906301_-	SINE	Alu	AluJb
CAediting_1320329	chr19_18906304_-	SINE	Alu	AluJb
CAediting_1320330	chr19_18906322_-	SINE	Alu	AluJb
CAediting_1320331	chr19_18906330_-	SINE	Alu	AluJb
CAediting_1320332	chr19_18906334_-	SINE	Alu	AluJb
CAediting_1320336	chr19_18908157_-	SINE	Alu	AluJb
CAediting_1320337	chr19_18908175_-	SINE	Alu	AluJb
CAediting_1320338	chr19_18908187_-	SINE	Alu	AluJb
CAediting_1320339	chr19_18908188_-	SINE	Alu	AluJb
CAediting_1320340	chr19_18908189_-	SINE	Alu	AluJb
CAediting_1320341	chr19_18908211_-	SINE	Alu	AluJb
CAediting_1320342	chr19_18908237_-	SINE	Alu	AluJb
CAediting_1320343	chr19_18908259_-	SINE	Alu	AluJb
CAediting_1320344	chr19_18908261_-	SINE	Alu	AluJb
CAediting_1320345	chr19_18908264_-	SINE	Alu	AluJb
CAediting_1320346	chr19_18908287_-	SINE	Alu	AluJb
CAediting_1320347	chr19_18908303_-	SINE	Alu	AluJb
CAediting_1320348	chr19_18908315_-	SINE	Alu	AluJb
CAediting_1320349	chr19_18908318_-	SINE	Alu	AluJb
CAediting_1320350	chr19_18908319_-	SINE	Alu	AluJb
CAediting_1320351	chr19_18908327_-	SINE	Alu	AluJb
CAediting_1320352	chr19_18908340_-	SINE	Alu	AluJb
CAediting_1320353	chr19_18908344_-	SINE	Alu	AluJb
CAediting_1320354	chr19_18908345_-	SINE	Alu	AluJb
CAediting_1320355	chr19_18908358_-	SINE	Alu	AluJb
CAediting_1320356	chr19_18908365_-	SINE	Alu	AluJb
CAediting_1320357	chr19_18908370_-	SINE	Alu	AluJb
CAediting_1320358	chr19_18908375_-	SINE	Alu	AluJb
CAediting_1320359	chr19_18908377_-	SINE	Alu	AluJb
CAediting_1320360	chr19_18908387_-	SINE	Alu	AluJb
CAediting_1320361	chr19_18908405_-	SINE	Alu	AluJb
CAediting_1320362	chr19_18908423_-	SINE	Alu	AluJb
CAediting_1320363	chr19_18908482_-	SINE	Alu	AluJb
CAediting_1320364	chr19_18908584_-	SINE	Alu	AluY
CAediting_1320365	chr19_18908649_-	SINE	Alu	AluY
CAediting_1320366	chr19_18908655_-	SINE	Alu	AluY
CAediting_1320367	chr19_18908673_-	SINE	Alu	AluY
CAediting_1320368	chr19_18908681_-	SINE	Alu	AluY
CAediting_1320369	chr19_18908684_-	SINE	Alu	AluY
CAediting_1320370	chr19_18908685_-	SINE	Alu	AluY
CAediting_1320371	chr19_18908699_-	SINE	Alu	AluY
CAediting_1320372	chr19_18908702_-	SINE	Alu	AluY
CAediting_1320373	chr19_18908720_-	SINE	Alu	AluY
CAediting_1320374	chr19_18908789_-	SINE	Alu	AluY
CAediting_1320375	chr19_18908790_-	SINE	Alu	AluY
CAediting_1320376	chr19_18908796_-	SINE	Alu	AluY
CAediting_1320377	chr19_18908841_-	SINE	Alu	AluJb
CAediting_1320378	chr19_18908843_-	SINE	Alu	AluJb
CAediting_1320379	chr19_18908870_-	SINE	Alu	AluJb
CAediting_1320380	chr19_18908874_-	SINE	Alu	AluJb
CAediting_1320381	chr19_18908879_-	SINE	Alu	AluJb
CAediting_1320382	chr19_18908886_-	SINE	Alu	AluJb
CAediting_1320383	chr19_18908888_-	SINE	Alu	AluJb
CAediting_1320384	chr19_18908898_-	SINE	Alu	AluJb
CAediting_1320385	chr19_18908903_-	SINE	Alu	AluJb
CAediting_1320386	chr19_18908916_-	SINE	Alu	AluJb
CAediting_1320387	chr19_18908922_-	SINE	Alu	AluJb
CAediting_1320388	chr19_18908936_-	SINE	Alu	AluJb
CAediting_1320389	chr19_18908941_-	SINE	Alu	AluJb
CAediting_1320390	chr19_18908951_-	SINE	Alu	AluJb
CAediting_1320391	chr19_18908952_-	SINE	Alu	AluJb
CAediting_1320392	chr19_18908954_-	SINE	Alu	AluJb
CAediting_1320393	chr19_18908960_-	SINE	Alu	AluJb
CAediting_1320394	chr19_18908962_-	SINE	Alu	AluJb
CAediting_1320395	chr19_18908996_-	SINE	Alu	AluJb
CAediting_1320396	chr19_18909303_-	LTR	ERVL-MaLR	MLT1C
CAediting_1320397	chr19_18909483_-	LTR	ERVL-MaLR	MLT1C
CAediting_1320398	chr19_18909515_-	SINE	Alu	AluSx1
CAediting_1320399	chr19_18909586_-	SINE	Alu	AluSx1
CAediting_1320400	chr19_18909587_-	SINE	Alu	AluSx1
CAediting_1320401	chr19_18909595_-	SINE	Alu	AluSx1
CAediting_1320402	chr19_18909602_-	SINE	Alu	AluSx1
CAediting_1320403	chr19_18909604_-	SINE	Alu	AluSx1
CAediting_1320404	chr19_18909615_-	SINE	Alu	AluSx1
CAediting_1320405	chr19_18909616_-	SINE	Alu	AluSx1
CAediting_1320406	chr19_18909624_-	SINE	Alu	AluSx1
CAediting_1320407	chr19_18909625_-	SINE	Alu	AluSx1
CAediting_1320408	chr19_18909630_-	SINE	Alu	AluSx1
CAediting_1320409	chr19_18909634_-	SINE	Alu	AluSx1
CAediting_1320410	chr19_18909651_-	SINE	Alu	AluSx1
CAediting_1320411	chr19_18909656_-	SINE	Alu	AluSx1
CAediting_1320412	chr19_18909665_-	SINE	Alu	AluSx1
CAediting_1320413	chr19_18909675_-	SINE	Alu	AluSx1
CAediting_1320414	chr19_18909676_-	SINE	Alu	AluSx1
CAediting_1320415	chr19_18909684_-	SINE	Alu	AluSx1
CAediting_1320416	chr19_18909686_-	SINE	Alu	AluSx1
CAediting_1320417	chr19_18909687_-	SINE	Alu	AluSx1
CAediting_1320418	chr19_18909690_-	SINE	Alu	AluSx1
CAediting_1320419	chr19_18909693_-	SINE	Alu	AluSx1
CAediting_1320420	chr19_18909699_-	SINE	Alu	AluSx1
CAediting_1320421	chr19_18909704_-	SINE	Alu	AluSx1
CAediting_1320422	chr19_18909706_-	SINE	Alu	AluSx1
CAediting_1320423	chr19_18909729_-	SINE	Alu	AluSx1
CAediting_1320424	chr19_18909730_-	SINE	Alu	AluSx1
CAediting_1320425	chr19_18909740_-	SINE	Alu	AluSx1
CAediting_1320426	chr19_18909750_-	SINE	Alu	AluSx1
CAediting_1320427	chr19_18909755_-	SINE	Alu	AluSx1
CAediting_1320428	chr19_18909777_-	SINE	Alu	AluSx1
CAediting_1320429	chr19_18909780_-	SINE	Alu	AluSx1
CAediting_1320430	chr19_18909785_-	SINE	Alu	AluSx1
CAediting_1320431	chr19_18909786_-	SINE	Alu	AluSx1
CAediting_1320432	chr19_18909792_-	SINE	Alu	AluSx1
CAediting_1320433	chr19_18909794_-	SINE	Alu	AluSx1
CAediting_1320434	chr19_18909802_-	SINE	Alu	AluSx1
CAediting_1320435	chr19_18910369_-	SINE	Alu	AluSx
CAediting_1320436	chr19_18910374_-	SINE	Alu	AluSx
CAediting_1320437	chr19_18910406_-	SINE	Alu	AluSx
CAediting_1320438	chr19_18910420_-	SINE	Alu	AluSx
CAediting_1320439	chr19_18910423_-	SINE	Alu	AluSx
CAediting_1320440	chr19_18910436_-	SINE	Alu	AluSx
CAediting_1320441	chr19_18910473_-	SINE	Alu	AluSx
CAediting_1320442	chr19_18910485_-	SINE	Alu	AluSx
CAediting_1320443	chr19_18910503_-	SINE	Alu	AluSx
CAediting_1320444	chr19_18910522_-	SINE	Alu	AluSx
CAediting_1320445	chr19_18910523_-	SINE	Alu	AluSx
CAediting_1320446	chr19_18910540_-	SINE	Alu	AluSx
CAediting_1320447	chr19_18910560_-	SINE	Alu	AluSx
CAediting_1320448	chr19_18910571_-	SINE	Alu	AluSx
CAediting_1320449	chr19_18911587_-	SINE	Alu	AluY
CAediting_1320450	chr19_18911690_-	SINE	Alu	AluY
CAediting_1320451	chr19_18911755_-	SINE	Alu	AluY
CAediting_1320452	chr19_18911962_-	SINE	Alu	AluSp
CAediting_1320453	chr19_18911988_-	SINE	Alu	AluSp
CAediting_1320454	chr19_18911989_-	SINE	Alu	AluSp
CAediting_1320455	chr19_18912225_-	SINE	Alu	AluJb
CAediting_1320456	chr19_18912258_-	SINE	Alu	AluJb
CAediting_1320457	chr19_18912285_-	SINE	Alu	AluJb
CAediting_1320458	chr19_18912311_-	SINE	Alu	AluJb
CAediting_1320459	chr19_18912312_-	SINE	Alu	AluJb
CAediting_1320460	chr19_18912705_-	SINE	Alu	AluSx4
CAediting_1320461	chr19_18914283_-	SINE	Alu	AluSx1
CAediting_1320462	chr19_18914295_-	SINE	Alu	AluSx1
CAediting_1320463	chr19_18914310_-	SINE	Alu	AluSx1
CAediting_1320464	chr19_18914314_-	SINE	Alu	AluSx1
CAediting_1320465	chr19_18914321_-	SINE	Alu	AluSx1
CAediting_1320466	chr19_18914348_-	SINE	Alu	AluSx1
CAediting_1320467	chr19_18914378_-	SINE	Alu	AluSx1
CAediting_1320468	chr19_18914429_-	SINE	Alu	AluSx1
CAediting_1320469	chr19_18914459_-	SINE	Alu	AluSx1
CAediting_1320470	chr19_18914479_-	SINE	Alu	AluSx1
CAediting_1320471	chr19_18914481_-	SINE	Alu	AluSx1
CAediting_1320472	chr19_18914484_-	SINE	Alu	AluSx1
CAediting_1320473	chr19_18914802_-	SINE	Alu	AluSx4
CAediting_1320474	chr19_18914818_-	SINE	Alu	AluSx4
CAediting_1320475	chr19_18914833_-	SINE	Alu	AluSx4
CAediting_1320476	chr19_18914849_-	SINE	Alu	AluSx4
CAediting_1320477	chr19_18914854_-	SINE	Alu	AluSx4
CAediting_1320478	chr19_18914863_-	SINE	Alu	AluSx4
CAediting_1320479	chr19_18914864_-	SINE	Alu	AluSx4
CAediting_1320480	chr19_18914868_-	SINE	Alu	AluSx4
CAediting_1320481	chr19_18914878_-	SINE	Alu	AluSx4
CAediting_1320482	chr19_18914895_-	SINE	Alu	AluSx4
CAediting_1320483	chr19_18914901_-	SINE	Alu	AluSx4
CAediting_1320484	chr19_18914921_-	SINE	Alu	AluSx4
CAediting_1320485	chr19_18914922_-	SINE	Alu	AluSx4
CAediting_1320486	chr19_18914955_-	SINE	Alu	AluSx4
CAediting_1320487	chr19_18914993_-	SINE	Alu	AluSx4
CAediting_1320488	chr19_18914998_-	SINE	Alu	AluSx4
CAediting_1320489	chr19_18915007_-	SINE	Alu	AluSx4
CAediting_1320490	chr19_18915084_-	SINE	Alu	AluJo
CAediting_1320491	chr19_18915086_-	SINE	Alu	AluJo
CAediting_1320492	chr19_18915146_-	SINE	Alu	AluJo
CAediting_1320493	chr19_18915156_-	SINE	Alu	AluJo
CAediting_1320494	chr19_18916301_-	SINE	Alu	AluJo
CAediting_1320495	chr19_18916497_-	SINE	Alu	AluSx1
CAediting_1320496	chr19_18916531_-	SINE	Alu	AluSg
CAediting_1320497	chr19_18916837_-	SINE	Alu	AluSx1
CAediting_1320498	chr19_18916845_-	SINE	Alu	AluSx1
CAediting_1320499	chr19_18916931_-	SINE	Alu	AluSx1
CAediting_1320500	chr19_18917376_-	SINE	Alu	AluSq10
CAediting_1320501	chr19_18917403_-	SINE	Alu	AluSq10
CAediting_1320502	chr19_18917416_-	SINE	Alu	AluSq10
CAediting_1320503	chr19_18917436_-	SINE	Alu	AluSq10
CAediting_1320504	chr19_18917437_-	SINE	Alu	AluSq10
CAediting_1320505	chr19_18917461_-	SINE	Alu	AluSq10
CAediting_1320506	chr19_18917465_-	SINE	Alu	AluSq10
CAediting_1320507	chr19_18917480_-	SINE	Alu	AluSq10
CAediting_1320508	chr19_18917484_-	SINE	Alu	AluSq10
CAediting_1320509	chr19_18917507_-	SINE	Alu	AluSq10
CAediting_1320510	chr19_18917524_-	SINE	Alu	AluSq10
CAediting_1320511	chr19_18917532_-	SINE	Alu	AluSq10
CAediting_1320512	chr19_18917535_-	SINE	Alu	AluSq10
CAediting_1320513	chr19_18917536_-	SINE	Alu	AluSq10
CAediting_1320514	chr19_18917537_-	SINE	Alu	AluSq10
CAediting_1320515	chr19_18917543_-	SINE	Alu	AluSq10
CAediting_1320516	chr19_18917544_-	SINE	Alu	AluSq10
CAediting_1320517	chr19_18917551_-	SINE	Alu	AluSq10
CAediting_1320518	chr19_18917596_-	SINE	Alu	AluSq10
CAediting_1320519	chr19_18917636_-	SINE	Alu	AluSq10
CAediting_1320520	chr19_18917642_-	SINE	Alu	AluSq10
CAediting_1320521	chr19_18918026_-	SINE	Alu	AluSc
CAediting_1320522	chr19_18918040_-	SINE	Alu	AluSc
CAediting_1320523	chr19_18918066_-	SINE	Alu	AluSc
CAediting_1320524	chr19_18918068_-	SINE	Alu	AluSc
CAediting_1320525	chr19_18918104_-	SINE	Alu	AluSc
CAediting_1320526	chr19_18918107_-	SINE	Alu	AluSc
CAediting_1320527	chr19_18918108_-	SINE	Alu	AluSc
CAediting_1320528	chr19_18918114_-	SINE	Alu	AluSc
CAediting_1320529	chr19_18918574_-	SINE	Alu	AluSx1
CAediting_1320530	chr19_18918601_-	SINE	Alu	AluSx1
CAediting_1320531	chr19_18918702_-	SINE	Alu	AluSx1

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RNA A-to-I editing events in the alternative splicing sites for COPE

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000105669.11.COPE.

Correlation between RNA A-to-I editing and PSI for ENSG00000105669.11.COPE.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for COPE

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for COPE

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for COPE

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_86358	chr1_109598906_+	ENSG00000105669.11	ENST00000262812	hsa-miR-197-5p	18899606	18899611	6mer	18899605	18899627	152	-37.97
CAediting_86358	chr1_109598906_+	ENSG00000105669.11	ENST00000349893	hsa-miR-197-5p	18899606	18899611	6mer	18899605	18899627	152	-37.97
CAediting_86358	chr1_109598906_+	ENSG00000105669.11	ENST00000600932	hsa-miR-197-5p	18899606	18899611	6mer	18899605	18899627	152	-37.97
CAediting_86358	chr1_109598906_+	ENSG00000105669.11	ENST00000351079	hsa-miR-197-5p	18899606	18899611	6mer	18899605	18899627	152	-37.97

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for COPE

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for COPE

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
ESCA	CAediting_1320404	chr19_18909615_-	0.0205828141020904	0.284541936317805	.	.	0.0213897666837252	0.282831621370958

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Relation with cancer stages for COPE

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for COPE

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for COPE

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for COPE

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene