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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: CHEK2 (CAeditome ID:11200)

Gene summary for CHEK2

check button Gene summary
Gene informationGene symbol

CHEK2

Gene ID

11200

Gene namecheckpoint kinase 2
SynonymsCDS1|CHK2|HuCds1|LFS2|PP1425|RAD53|hCds1
Cytomap

22q12.1

Type of geneprotein-coding
Descriptionserine/threonine-protein kinase Chk2CHK2 checkpoint homologcds1 homologcheckpoint-like protein CHK2
Modification date20210524
UniProtAcc

O96017

Context- 34113003(Clinical utility of testing for PALB2 and CHEK2 c.1100delC in breast and ovarian cancer)

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
CHEK2

GO:0006974

Serine/threonine-protein kinase Chk2

24550317

CHEK2

GO:0042770

Serine/threonine-protein kinase Chk2

14744935

CHEK2

GO:0000781

Serine/threonine-protein kinase Chk2

15149599

CHEK2

GO:0004674

Serine/threonine-protein kinase Chk2

12717439

CHEK2

GO:0004674

Serine/threonine-protein kinase Chk2

16794575

CHEK2

GO:0042803

Serine/threonine-protein kinase Chk2

16794575

CHEK2

GO:0006355

Serine/threonine-protein kinase Chk2

12717439

CHEK2

GO:0006468

Serine/threonine-protein kinase Chk2

12717439

CHEK2

GO:0008630

Serine/threonine-protein kinase Chk2

12402044

CHEK2

GO:0045893

Serine/threonine-protein kinase Chk2

17101782

CHEK2

GO:0046777

Serine/threonine-protein kinase Chk2

16794575

CHEK2

GO:0046777

Serine/threonine-protein kinase Chk2

18644861

CHEK2

GO:0050821

Serine/threonine-protein kinase Chk2

12717439

CHEK2

GO:0005654

Serine/threonine-protein kinase Chk2

0000052

CHEK2

GO:0005794

Serine/threonine-protein kinase Chk2

0000052

CHEK2

GO:0016605

Serine/threonine-protein kinase Chk2

12402044


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RNA A-to-I events for CHEK2

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000183765.19

check button RNA A-to-I editing events in Cancer.
CAediting_1469949(28696482, -), CAediting_1469950(28696487, -), CAediting_1469951(28696511, -), CAediting_1469952(28696512, -), CAediting_1469953(28696631, -), CAediting_1469954(28697635, -), CAediting_1469955(28697637, -), CAediting_1469956(28697638, -), CAediting_1469957(28697646, -), CAediting_1469958(28697667, -), CAediting_1469959(28697672, -), CAediting_1469960(28697685, -), CAediting_1469961(28697691, -), CAediting_1469962(28697698, -), CAediting_1469963(28697702, -), CAediting_1469964(28697729, -), CAediting_1469965(28697739, -), CAediting_1469966(28697751, -), CAediting_1469967(28697752, -), CAediting_1469968(28697753, -), CAediting_1469969(28697758, -), CAediting_1469970(28697789, -), CAediting_1469971(28697803, -), CAediting_1469972(28697818, -), CAediting_1469973(28697826, -), CAediting_1469974(28697843, -), CAediting_1469975(28697848, -), CAediting_1469976(28697849, -), CAediting_1469977(28697871, -), CAediting_1469978(28698140, -), CAediting_1469979(28698275, -), CAediting_1469980(28698297, -), CAediting_1469981(28698314, -), CAediting_1469982(28698315, -), CAediting_1469983(28698335, -), CAediting_1469984(28698348, -), CAediting_1469985(28698351, -), CAediting_1469986(28698393, -), CAediting_1469987(28699120, -), CAediting_1469988(28699165, -), CAediting_1469989(28699202, -), CAediting_1469990(28699222, -), CAediting_1469991(28699253, -), CAediting_1469992(28699254, -), CAediting_1469993(28699292, -), CAediting_1469994(28699298, -), CAediting_1469995(28699428, -), CAediting_1469996(28699442, -), CAediting_1469997(28699476, -), CAediting_1469998(28699486, -), CAediting_1469999(28699493, -), CAediting_1470000(28699503, -), CAediting_1470001(28699529, -), CAediting_1470002(28699532, -), CAediting_1470003(28699547, -), CAediting_1470004(28699558, -), CAediting_1470005(28699560, -), CAediting_1470006(28699564, -), CAediting_1470007(28699568, -), CAediting_1470008(28699572, -), CAediting_1470009(28699583, -), CAediting_1470010(28699591, -), CAediting_1470011(28699634, -), CAediting_1470012(28699637, -), CAediting_1470013(28704457, -), CAediting_1470014(28704461, -), CAediting_1470015(28704465, -), CAediting_1470016(28704471, -), CAediting_1470017(28704536, -), CAediting_1470018(28704537, -), CAediting_1470019(28704552, -), CAediting_1470020(28704560, -), CAediting_1470021(28705886, -), CAediting_1470022(28706536, -), CAediting_1470023(28706541, -), CAediting_1470024(28707975, -), CAediting_1470025(28708258, -), CAediting_1470026(28708306, -), CAediting_1470027(28708311, -), CAediting_1470028(28708314, -), CAediting_1470029(28708336, -), CAediting_1470030(28715516, -), CAediting_1470031(28715616, -), CAediting_1470032(28715692, -), CAediting_1470033(28715709, -), CAediting_1470034(28715958, -), CAediting_1470035(28716004, -), CAediting_1470036(28716123, -), CAediting_1470037(28716124, -), CAediting_1470038(28716128, -), CAediting_1470039(28716145, -), CAediting_1470040(28716164, -), CAediting_1470041(28716334, -), CAediting_1470042(28716400, -), CAediting_1470043(28716401, -), CAediting_1470044(28716469, -), CAediting_1470045(28716476, -), CAediting_1470046(28717189, -), CAediting_1470047(28717266, -), CAediting_1470048(28718018, -), CAediting_1470049(28720215, -), CAediting_1470050(28720228, -), CAediting_1470051(28720229, -), CAediting_1470052(28720286, -), CAediting_1470053(28720287, -), CAediting_1470054(28721359, -), CAediting_1470055(28721363, -), CAediting_1470056(28721379, -), CAediting_1470057(28721411, -), CAediting_1470058(28721435, -), CAediting_1470059(28721910, -), CAediting_1470060(28722795, -), CAediting_1470061(28722827, -), CAediting_1470062(28724308, -), CAediting_1470063(28724704, -), CAediting_1470064(28730459, -), CAediting_1470065(28730460, -), CAediting_1470066(28730481, -), CAediting_1470067(28730528, -), CAediting_1470068(28731484, -), CAediting_1470069(28732079, -), CAediting_1470070(28732080, -), CAediting_1470071(28735151, -), CAediting_1470072(28735225, -), CAediting_1470073(28735289, -), CAediting_1470074(28735294, -), CAediting_1470075(28735324, -), CAediting_1470076(28735690, -), CAediting_1470077(28735719, -), CAediting_1470078(28735742, -), CAediting_1470079(28735760, -), CAediting_1470080(28735763, -), CAediting_1470081(28735770, -), CAediting_1470082(28735796, -), CAediting_1470083(28735799, -), CAediting_1470084(28735830, -), CAediting_1470085(28736683, -), CAediting_1470086(28736695, -), CAediting_1470087(28736722, -), CAediting_1470088(28736826, -), CAediting_1470089(28736848, -), CAediting_1470090(28736881, -), CAediting_1470091(28736891, -), CAediting_1470092(28736893, -), CAediting_1470093(28737535, -), CAediting_1470094(28737536, -), CAediting_1470095(28737537, -), CAediting_1470096(28737538, -), CAediting_1470097(28737542, -), CAediting_1470098(28737562, -), CAediting_1470099(28737566, -), CAediting_1470100(28737575, -), CAediting_1470101(28737581, -), CAediting_1470102(28737584, -), CAediting_1470103(28737592, -), CAediting_1470104(28737601, -), CAediting_1470105(28737602, -), CAediting_1470106(28737607, -), CAediting_1470107(28737608, -), CAediting_1470108(28737634, -), CAediting_1470109(28737638, -), CAediting_1470110(28737643, -), CAediting_1470111(28737666, -), CAediting_1470112(28737667, -), CAediting_1470113(28737687, -), CAediting_1470114(28737698, -), CAediting_1470115(28737706, -), CAediting_1470116(28737711, -), CAediting_1470117(28737750, -), CAediting_1470118(28737751, -), CAediting_1470119(28737759, -), CAediting_1470120(28737931, -), CAediting_1470121(28737939, -), CAediting_1470122(28737943, -), CAediting_1470123(28737961, -), CAediting_1470124(28737985, -), CAediting_1470125(28738014, -), CAediting_1470126(28738023, -), CAediting_1470127(28738026, -), CAediting_1470128(28738040, -), CAediting_1470129(28738083, -), CAediting_1470130(28738085, -), CAediting_1470131(28738095, -), CAediting_1470132(28738098, -), CAediting_1470133(28738112, -), CAediting_1470134(28738124, -), CAediting_1470135(28738138, -), CAediting_1470136(28738139, -), CAediting_1470137(28738145, -), CAediting_1470138(28738199, -), CAediting_1470139(28739086, -), CAediting_1470140(28739148, -), CAediting_1470141(28739158, -), CAediting_1470142(28739683, -), CAediting_1470143(28740079, -),

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RNA editing positional annotations for CHEK2 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred
CAediting_1470065chr22_28730460_-nonsynonymous SNVENST00000382580.5c.A408Gp.I136MD.N
CAediting_1470065chr22_28730460_-nonsynonymous SNVENST00000439200.4c.A408Gp.I136MD.N
CAediting_1470065chr22_28730460_-nonsynonymous SNVENST00000454252.1c.A42Gp.I14MD.N
CAediting_1470067chr22_28730528_-nonsynonymous SNVENST00000382580.5c.A340Gp.T114ADBN
CAediting_1470067chr22_28730528_-nonsynonymous SNVENST00000439200.4c.A340Gp.T114ADBN

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_1469949chr22_28696482_-intronic
CAediting_1469950chr22_28696487_-intronic
CAediting_1469951chr22_28696511_-intronic
CAediting_1469952chr22_28696512_-intronic
CAediting_1469953chr22_28696631_-intronic
CAediting_1469954chr22_28697635_-ncRNA_intronic
CAediting_1469955chr22_28697637_-ncRNA_intronic
CAediting_1469956chr22_28697638_-ncRNA_intronic
CAediting_1469957chr22_28697646_-ncRNA_intronic
CAediting_1469958chr22_28697667_-ncRNA_intronic
CAediting_1469959chr22_28697672_-ncRNA_intronic
CAediting_1469960chr22_28697685_-ncRNA_intronic
CAediting_1469961chr22_28697691_-ncRNA_intronic
CAediting_1469962chr22_28697698_-ncRNA_intronic
CAediting_1469963chr22_28697702_-ncRNA_intronic
CAediting_1469964chr22_28697729_-ncRNA_intronic
CAediting_1469965chr22_28697739_-ncRNA_intronic
CAediting_1469966chr22_28697751_-ncRNA_intronic
CAediting_1469967chr22_28697752_-ncRNA_intronic
CAediting_1469968chr22_28697753_-ncRNA_intronic
CAediting_1469969chr22_28697758_-ncRNA_intronic
CAediting_1469970chr22_28697789_-ncRNA_intronic
CAediting_1469971chr22_28697803_-ncRNA_intronic
CAediting_1469972chr22_28697818_-ncRNA_intronic
CAediting_1469973chr22_28697826_-ncRNA_intronic
CAediting_1469974chr22_28697843_-ncRNA_intronic
CAediting_1469975chr22_28697848_-ncRNA_intronic
CAediting_1469976chr22_28697849_-ncRNA_intronic
CAediting_1469977chr22_28697871_-ncRNA_intronic
CAediting_1469978chr22_28698140_-ncRNA_intronic
CAediting_1469979chr22_28698275_-ncRNA_intronic
CAediting_1469980chr22_28698297_-ncRNA_intronic
CAediting_1469981chr22_28698314_-ncRNA_intronic
CAediting_1469982chr22_28698315_-ncRNA_intronic
CAediting_1469983chr22_28698335_-ncRNA_intronic
CAediting_1469984chr22_28698348_-ncRNA_intronic
CAediting_1469985chr22_28698351_-ncRNA_intronic
CAediting_1469986chr22_28698393_-ncRNA_intronic
CAediting_1469987chr22_28699120_-ncRNA_intronic
CAediting_1469988chr22_28699165_-ncRNA_intronic
CAediting_1469989chr22_28699202_-ncRNA_intronic
CAediting_1469990chr22_28699222_-ncRNA_intronic
CAediting_1469991chr22_28699253_-ncRNA_intronic
CAediting_1469992chr22_28699254_-ncRNA_intronic
CAediting_1469993chr22_28699292_-ncRNA_intronic
CAediting_1469994chr22_28699298_-ncRNA_intronic
CAediting_1469995chr22_28699428_-ncRNA_intronic
CAediting_1469996chr22_28699442_-ncRNA_intronic
CAediting_1469997chr22_28699476_-ncRNA_intronic
CAediting_1469998chr22_28699486_-ncRNA_intronic
CAediting_1469999chr22_28699493_-ncRNA_intronic
CAediting_1470000chr22_28699503_-ncRNA_intronic
CAediting_1470001chr22_28699529_-ncRNA_intronic
CAediting_1470002chr22_28699532_-ncRNA_intronic
CAediting_1470003chr22_28699547_-ncRNA_intronic
CAediting_1470004chr22_28699558_-ncRNA_intronic
CAediting_1470005chr22_28699560_-ncRNA_intronic
CAediting_1470006chr22_28699564_-ncRNA_intronic
CAediting_1470007chr22_28699568_-ncRNA_intronic
CAediting_1470008chr22_28699572_-ncRNA_intronic
CAediting_1470009chr22_28699583_-ncRNA_intronic
CAediting_1470010chr22_28699591_-ncRNA_intronic
CAediting_1470011chr22_28699634_-ncRNA_intronic
CAediting_1470012chr22_28699637_-ncRNA_intronic
CAediting_1470013chr22_28704457_-ncRNA_intronic
CAediting_1470014chr22_28704461_-ncRNA_intronic
CAediting_1470015chr22_28704465_-ncRNA_intronic
CAediting_1470016chr22_28704471_-ncRNA_intronic
CAediting_1470017chr22_28704536_-ncRNA_intronic
CAediting_1470018chr22_28704537_-ncRNA_intronic
CAediting_1470019chr22_28704552_-ncRNA_intronic
CAediting_1470020chr22_28704560_-ncRNA_intronic
CAediting_1470021chr22_28705886_-ncRNA_intronic
CAediting_1470022chr22_28706536_-ncRNA_intronic
CAediting_1470023chr22_28706541_-ncRNA_intronic
CAediting_1470024chr22_28707975_-ncRNA_intronic
CAediting_1470025chr22_28708258_-ncRNA_intronic
CAediting_1470026chr22_28708306_-ncRNA_intronic
CAediting_1470027chr22_28708311_-ncRNA_intronic
CAediting_1470028chr22_28708314_-ncRNA_intronic
CAediting_1470029chr22_28708336_-ncRNA_intronic
CAediting_1470030chr22_28715516_-intronic
CAediting_1470031chr22_28715616_-intronic
CAediting_1470032chr22_28715692_-intronic
CAediting_1470033chr22_28715709_-intronic
CAediting_1470034chr22_28715958_-intronic
CAediting_1470035chr22_28716004_-intronic
CAediting_1470036chr22_28716123_-intronic
CAediting_1470037chr22_28716124_-intronic
CAediting_1470038chr22_28716128_-intronic
CAediting_1470039chr22_28716145_-intronic
CAediting_1470040chr22_28716164_-intronic
CAediting_1470041chr22_28716334_-intronic
CAediting_1470042chr22_28716400_-intronic
CAediting_1470043chr22_28716401_-intronic
CAediting_1470044chr22_28716469_-intronic
CAediting_1470045chr22_28716476_-intronic
CAediting_1470046chr22_28717189_-intronic
CAediting_1470047chr22_28717266_-intronic
CAediting_1470048chr22_28718018_-intronic
CAediting_1470049chr22_28720215_-intronic
CAediting_1470050chr22_28720228_-intronic
CAediting_1470051chr22_28720229_-intronic
CAediting_1470052chr22_28720286_-intronic
CAediting_1470053chr22_28720287_-intronic
CAediting_1470054chr22_28721359_-intronic
CAediting_1470055chr22_28721363_-intronic
CAediting_1470056chr22_28721379_-intronic
CAediting_1470057chr22_28721411_-intronic
CAediting_1470058chr22_28721435_-intronic
CAediting_1470059chr22_28721910_-intronic
CAediting_1470060chr22_28722795_-intronic
CAediting_1470061chr22_28722827_-intronic
CAediting_1470062chr22_28724308_-intronic
CAediting_1470063chr22_28724704_-UTR3
CAediting_1470064chr22_28730459_-exonic
CAediting_1470065chr22_28730460_-exonic
CAediting_1470066chr22_28730481_-exonic
CAediting_1470067chr22_28730528_-exonic
CAediting_1470068chr22_28731484_-intronic
CAediting_1470069chr22_28732079_-intronic
CAediting_1470070chr22_28732080_-intronic
CAediting_1470071chr22_28735151_-intronic
CAediting_1470072chr22_28735225_-intronic
CAediting_1470073chr22_28735289_-intronic
CAediting_1470074chr22_28735294_-intronic
CAediting_1470075chr22_28735324_-intronic
CAediting_1470076chr22_28735690_-intronic
CAediting_1470077chr22_28735719_-intronic
CAediting_1470078chr22_28735742_-intronic
CAediting_1470079chr22_28735760_-intronic
CAediting_1470080chr22_28735763_-intronic
CAediting_1470081chr22_28735770_-intronic
CAediting_1470082chr22_28735796_-intronic
CAediting_1470083chr22_28735799_-intronic
CAediting_1470084chr22_28735830_-intronic
CAediting_1470085chr22_28736683_-intronic
CAediting_1470086chr22_28736695_-intronic
CAediting_1470087chr22_28736722_-intronic
CAediting_1470088chr22_28736826_-intronic
CAediting_1470089chr22_28736848_-intronic
CAediting_1470090chr22_28736881_-intronic
CAediting_1470091chr22_28736891_-intronic
CAediting_1470092chr22_28736893_-intronic
CAediting_1470093chr22_28737535_-intronic
CAediting_1470094chr22_28737536_-intronic
CAediting_1470095chr22_28737537_-intronic
CAediting_1470096chr22_28737538_-intronic
CAediting_1470097chr22_28737542_-intronic
CAediting_1470098chr22_28737562_-intronic
CAediting_1470099chr22_28737566_-intronic
CAediting_1470100chr22_28737575_-intronic
CAediting_1470101chr22_28737581_-intronic
CAediting_1470102chr22_28737584_-intronic
CAediting_1470103chr22_28737592_-intronic
CAediting_1470104chr22_28737601_-intronic
CAediting_1470105chr22_28737602_-intronic
CAediting_1470106chr22_28737607_-intronic
CAediting_1470107chr22_28737608_-intronic
CAediting_1470108chr22_28737634_-intronic
CAediting_1470109chr22_28737638_-intronic
CAediting_1470110chr22_28737643_-intronic
CAediting_1470111chr22_28737666_-intronic
CAediting_1470112chr22_28737667_-intronic
CAediting_1470113chr22_28737687_-intronic
CAediting_1470114chr22_28737698_-intronic
CAediting_1470115chr22_28737706_-intronic
CAediting_1470116chr22_28737711_-intronic
CAediting_1470117chr22_28737750_-intronic
CAediting_1470118chr22_28737751_-intronic
CAediting_1470119chr22_28737759_-intronic
CAediting_1470120chr22_28737931_-UTR5
CAediting_1470121chr22_28737939_-UTR5
CAediting_1470122chr22_28737943_-UTR5
CAediting_1470123chr22_28737961_-UTR5
CAediting_1470124chr22_28737985_-UTR5
CAediting_1470125chr22_28738014_-UTR5
CAediting_1470126chr22_28738023_-UTR5
CAediting_1470127chr22_28738026_-UTR5
CAediting_1470128chr22_28738040_-splicing
CAediting_1470129chr22_28738083_-intronic
CAediting_1470130chr22_28738085_-intronic
CAediting_1470131chr22_28738095_-intronic
CAediting_1470132chr22_28738098_-intronic
CAediting_1470133chr22_28738112_-intronic
CAediting_1470134chr22_28738124_-intronic
CAediting_1470135chr22_28738138_-intronic
CAediting_1470136chr22_28738139_-intronic
CAediting_1470137chr22_28738145_-intronic
CAediting_1470138chr22_28738199_-intronic
CAediting_1470139chr22_28739086_-intronic
CAediting_1470140chr22_28739148_-intronic
CAediting_1470141chr22_28739158_-intronic
CAediting_1470142chr22_28739683_-intronic
CAediting_1470143chr22_28740079_-intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_1469949chr22_28696482_-SINEAluAluSx1
CAediting_1469950chr22_28696487_-SINEAluAluSx1
CAediting_1469951chr22_28696511_-SINEAluAluSx1
CAediting_1469952chr22_28696512_-SINEAluAluSx1
CAediting_1469953chr22_28696631_-SINEAluAluSx1
CAediting_1469954chr22_28697635_-SINEAluAluJo
CAediting_1469955chr22_28697637_-SINEAluAluJo
CAediting_1469956chr22_28697638_-SINEAluAluJo
CAediting_1469957chr22_28697646_-SINEAluAluJo
CAediting_1469958chr22_28697667_-SINEAluAluJo
CAediting_1469959chr22_28697672_-SINEAluAluJo
CAediting_1469960chr22_28697685_-SINEAluAluJo
CAediting_1469961chr22_28697691_-SINEAluAluJo
CAediting_1469962chr22_28697698_-SINEAluAluJo
CAediting_1469963chr22_28697702_-SINEAluAluJo
CAediting_1469964chr22_28697729_-SINEAluAluJo
CAediting_1469965chr22_28697739_-SINEAluAluJo
CAediting_1469966chr22_28697751_-SINEAluAluJo
CAediting_1469967chr22_28697752_-SINEAluAluJo
CAediting_1469968chr22_28697753_-SINEAluAluJo
CAediting_1469969chr22_28697758_-SINEAluAluJo
CAediting_1469970chr22_28697789_-SINEAluAluJo
CAediting_1469971chr22_28697803_-SINEAluAluJo
CAediting_1469972chr22_28697818_-SINEAluAluJo
CAediting_1469973chr22_28697826_-SINEAluAluJo
CAediting_1469974chr22_28697843_-SINEAluAluJo
CAediting_1469975chr22_28697848_-SINEAluAluJo
CAediting_1469976chr22_28697849_-SINEAluAluJo
CAediting_1469977chr22_28697871_-SINEAluAluJo
CAediting_1469978chr22_28698140_-SINEAluAluSx1
CAediting_1469979chr22_28698275_-SINEAluAluSx1
CAediting_1469980chr22_28698297_-SINEAluAluSx1
CAediting_1469981chr22_28698314_-SINEAluAluSx1
CAediting_1469982chr22_28698315_-SINEAluAluSx1
CAediting_1469983chr22_28698335_-SINEAluAluSx1
CAediting_1469984chr22_28698348_-SINEAluAluSx1
CAediting_1469985chr22_28698351_-SINEAluAluSx1
CAediting_1469986chr22_28698393_-SINEAluAluSx1
CAediting_1469987chr22_28699120_-SINEAluAluJb
CAediting_1469988chr22_28699165_-SINEAluAluJb
CAediting_1469989chr22_28699202_-SINEAluAluJb
CAediting_1469990chr22_28699222_-SINEAluAluJb
CAediting_1469991chr22_28699253_-SINEAluAluJb
CAediting_1469992chr22_28699254_-SINEAluAluJb
CAediting_1469993chr22_28699292_-SINEAluAluJb
CAediting_1469994chr22_28699298_-SINEAluAluJb
CAediting_1469995chr22_28699428_-SINEAluAluSc
CAediting_1469996chr22_28699442_-SINEAluAluSc
CAediting_1469997chr22_28699476_-SINEAluAluSc
CAediting_1469998chr22_28699486_-SINEAluAluSc
CAediting_1469999chr22_28699493_-SINEAluAluSc
CAediting_1470000chr22_28699503_-SINEAluAluSc
CAediting_1470001chr22_28699529_-SINEAluAluSc
CAediting_1470002chr22_28699532_-SINEAluAluSc
CAediting_1470003chr22_28699547_-SINEAluAluSc
CAediting_1470004chr22_28699558_-SINEAluAluSc
CAediting_1470005chr22_28699560_-SINEAluAluSc
CAediting_1470006chr22_28699564_-SINEAluAluSc
CAediting_1470007chr22_28699568_-SINEAluAluSc
CAediting_1470008chr22_28699572_-SINEAluAluSc
CAediting_1470009chr22_28699583_-SINEAluAluSc
CAediting_1470010chr22_28699591_-SINEAluAluSc
CAediting_1470011chr22_28699634_-SINEAluAluSc
CAediting_1470012chr22_28699637_-SINEAluAluSc
CAediting_1470013chr22_28704457_-SINEAluAluSz
CAediting_1470014chr22_28704461_-SINEAluAluSz
CAediting_1470015chr22_28704465_-SINEAluAluSz
CAediting_1470016chr22_28704471_-SINEAluAluSz
CAediting_1470017chr22_28704536_-SINEAluAluSz
CAediting_1470018chr22_28704537_-SINEAluAluSz
CAediting_1470019chr22_28704552_-SINEAluAluSz
CAediting_1470020chr22_28704560_-SINEAluAluSz
CAediting_1470021chr22_28705886_-SINEAluAluSq2
CAediting_1470022chr22_28706536_-SINEAluAluJb
CAediting_1470023chr22_28706541_-SINEAluAluJb
CAediting_1470024chr22_28707975_-SINEAluAluY
CAediting_1470025chr22_28708258_-SINEAluAluJo
CAediting_1470026chr22_28708306_-SINEAluAluJo
CAediting_1470027chr22_28708311_-SINEAluAluJo
CAediting_1470028chr22_28708314_-SINEAluAluJo
CAediting_1470029chr22_28708336_-SINEAluAluJo
CAediting_1470030chr22_28715516_-SINEAluAluSz
CAediting_1470031chr22_28715616_-SINEAluAluSz
CAediting_1470032chr22_28715692_-SINEAluAluSz
CAediting_1470033chr22_28715709_-SINEAluAluSz
CAediting_1470034chr22_28715958_-SINEAluAluJb
CAediting_1470035chr22_28716004_-SINEAluAluJb
CAediting_1470036chr22_28716123_-SINEAluAluJb
CAediting_1470037chr22_28716124_-SINEAluAluJb
CAediting_1470038chr22_28716128_-SINEAluAluJb
CAediting_1470039chr22_28716145_-SINEAluAluJb
CAediting_1470040chr22_28716164_-SINEAluAluJb
CAediting_1470041chr22_28716334_-SINEAluAluSx
CAediting_1470042chr22_28716400_-SINEAluAluSx
CAediting_1470043chr22_28716401_-SINEAluAluSx
CAediting_1470044chr22_28716469_-SINEAluAluSx
CAediting_1470045chr22_28716476_-SINEAluAluSx
CAediting_1470046chr22_28717189_-SINEAluAluSc8
CAediting_1470047chr22_28717266_-SINEAluAluSc8
CAediting_1470048chr22_28718018_-SINEAluAluSx3
CAediting_1470049chr22_28720215_-SINEAluAluSq
CAediting_1470050chr22_28720228_-SINEAluAluSq
CAediting_1470051chr22_28720229_-SINEAluAluSq
CAediting_1470052chr22_28720286_-SINEAluAluSq
CAediting_1470053chr22_28720287_-SINEAluAluSq
CAediting_1470054chr22_28721359_-SINEAluAluSq10
CAediting_1470055chr22_28721363_-SINEAluAluSq10
CAediting_1470056chr22_28721379_-SINEAluAluSq10
CAediting_1470057chr22_28721411_-SINEAluAluSq10
CAediting_1470058chr22_28721435_-SINEAluAluSq10
CAediting_1470059chr22_28721910_-SINEAluAluJb
CAediting_1470060chr22_28722795_-SINEAluFAM
CAediting_1470061chr22_28722827_-SINEAluFAM
CAediting_1470062chr22_28724308_-SINEAluAluSx1
CAediting_1470063chr22_28724704_-SINEAluAluSp
CAediting_1470064chr22_28730459_-SINEAluAluJr
CAediting_1470065chr22_28730460_-SINEAluAluJr
CAediting_1470066chr22_28730481_-SINEAluAluJr
CAediting_1470067chr22_28730528_-SINEAluAluJr
CAediting_1470068chr22_28731484_-SINEAluAluSx1
CAediting_1470069chr22_28732079_-SINEAluAluSx1
CAediting_1470070chr22_28732080_-SINEAluAluSx1
CAediting_1470071chr22_28735151_-SINEAluAluSx3
CAediting_1470072chr22_28735225_-SINEAluAluSx3
CAediting_1470073chr22_28735289_-SINEAluAluSx3
CAediting_1470074chr22_28735294_-SINEAluAluSx3
CAediting_1470075chr22_28735324_-SINEAluAluSx3
CAediting_1470076chr22_28735690_-SINEAluAluSq2
CAediting_1470077chr22_28735719_-SINEAluAluSq2
CAediting_1470078chr22_28735742_-SINEAluAluSq2
CAediting_1470079chr22_28735760_-SINEAluAluSq2
CAediting_1470080chr22_28735763_-SINEAluAluSq2
CAediting_1470081chr22_28735770_-SINEAluAluSq2
CAediting_1470082chr22_28735796_-SINEAluAluSq2
CAediting_1470083chr22_28735799_-SINEAluAluSq2
CAediting_1470084chr22_28735830_-SINEAluAluSq2
CAediting_1470085chr22_28736683_-SINEAluAluJr
CAediting_1470086chr22_28736695_-SINEAluAluJr
CAediting_1470087chr22_28736722_-SINEAluAluJr
CAediting_1470088chr22_28736826_-SINEAluAluJr
CAediting_1470089chr22_28736848_-SINEAluAluJr
CAediting_1470090chr22_28736881_-SINEAluAluJr
CAediting_1470091chr22_28736891_-SINEAluAluJr
CAediting_1470092chr22_28736893_-SINEAluAluJr
CAediting_1470093chr22_28737535_-SINEAluAluSx
CAediting_1470094chr22_28737536_-SINEAluAluSx
CAediting_1470095chr22_28737537_-SINEAluAluSx
CAediting_1470096chr22_28737538_-SINEAluAluSx
CAediting_1470097chr22_28737542_-SINEAluAluSx
CAediting_1470098chr22_28737562_-SINEAluAluSx
CAediting_1470099chr22_28737566_-SINEAluAluSx
CAediting_1470100chr22_28737575_-SINEAluAluSx
CAediting_1470101chr22_28737581_-SINEAluAluSx
CAediting_1470102chr22_28737584_-SINEAluAluSx
CAediting_1470103chr22_28737592_-SINEAluAluSx
CAediting_1470104chr22_28737601_-SINEAluAluSx
CAediting_1470105chr22_28737602_-SINEAluAluSx
CAediting_1470106chr22_28737607_-SINEAluAluSx
CAediting_1470107chr22_28737608_-SINEAluAluSx
CAediting_1470108chr22_28737634_-SINEAluAluSx
CAediting_1470109chr22_28737638_-SINEAluAluSx
CAediting_1470110chr22_28737643_-SINEAluAluSx
CAediting_1470111chr22_28737666_-SINEAluAluSx
CAediting_1470112chr22_28737667_-SINEAluAluSx
CAediting_1470113chr22_28737687_-SINEAluAluSx
CAediting_1470114chr22_28737698_-SINEAluAluSx
CAediting_1470115chr22_28737706_-SINEAluAluSx
CAediting_1470116chr22_28737711_-SINEAluAluSx
CAediting_1470117chr22_28737750_-SINEAluAluSx
CAediting_1470118chr22_28737751_-SINEAluAluSx
CAediting_1470119chr22_28737759_-SINEAluAluSx
CAediting_1470120chr22_28737931_-SINEAluAluJb
CAediting_1470121chr22_28737939_-SINEAluAluJb
CAediting_1470122chr22_28737943_-SINEAluAluJb
CAediting_1470123chr22_28737961_-SINEAluAluJb
CAediting_1470124chr22_28737985_-SINEAluAluJb
CAediting_1470125chr22_28738014_-SINEAluAluJb
CAediting_1470126chr22_28738023_-SINEAluAluJb
CAediting_1470127chr22_28738026_-SINEAluAluJb
CAediting_1470128chr22_28738040_-SINEAluAluJb
CAediting_1470129chr22_28738083_-SINEAluAluJb
CAediting_1470130chr22_28738085_-SINEAluAluJb
CAediting_1470131chr22_28738095_-SINEAluAluJb
CAediting_1470132chr22_28738098_-SINEAluAluJb
CAediting_1470133chr22_28738112_-SINEAluAluJb
CAediting_1470134chr22_28738124_-SINEAluAluJb
CAediting_1470135chr22_28738138_-SINEAluAluJb
CAediting_1470136chr22_28738139_-SINEAluAluJb
CAediting_1470137chr22_28738145_-SINEAluAluJb
CAediting_1470138chr22_28738199_-SINEAluAluJb
CAediting_1470139chr22_28739086_-SINEAluAluSz6
CAediting_1470140chr22_28739148_-SINEAluAluSz6
CAediting_1470141chr22_28739158_-SINEAluAluSz6
CAediting_1470142chr22_28739683_-SINEAluAluSx1
CAediting_1470143chr22_28740079_-SINEAluAluSc5

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RNA A-to-I editing events in the alternative splicing sites for CHEK2

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength
ESCAediting_1470128chr22_28738040_-28738036:287380583SS0+2iATTTTTTGTATTTTCTGTAGATA8.98ATTTTTTGTATTTTCTGTGGATA1.02

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000183765.19.CHEK2.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000183765.19.CHEK2.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for CHEK2

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

check button Correlation between RNA A-to-I editing and gene expression.

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for CHEK2

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for CHEK2

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1470063chr22_28724704_-ENSG00000183765.19ENST00000433028hsa-miR-805228724699287247057mer-1a2872469928724717143.00-23.66

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1470063chr22_28724704_-ENSG00000183765.19ENST00000433028hsa-miR-10399-5p28724703287247097mer-m82872470228724723148-10.96
CAediting_1470063chr22_28724704_-ENSG00000183765.19ENST00000433028hsa-miR-5089-5p28724699287247057mer-m82872469828724718152-18.63
CAediting_1470063chr22_28724704_-ENSG00000183765.19ENST00000433028hsa-miR-6504-3p28724703287247097mer-m82872470228724726148-14.06

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_980496chr14_31014685_-ENSG00000183765.19ENST00000433028hsa-miR-624-3p28724753287247597mer-m82872475228724772148-13.23
CAediting_228905chr2_188297554_+ENSG00000183765.19ENST00000416671hsa-miR-561-3p28719401287194077mer-m82871940028719419148-9.71
CAediting_1306323chr19_13836462_-ENSG00000183765.19ENST00000416671hsa-miR-27a-3p28696956286969627mer-m82869695528696974157-22.14
CAediting_1306323chr19_13836462_-ENSG00000183765.19ENST00000417588hsa-miR-27a-3p28696956286969627mer-m82869695528696974157-22.14
CAediting_1306323chr19_13836462_-ENSG00000183765.19ENST00000433728hsa-miR-27a-3p28696956286969627mer-m82869695528696974157-22.14
CAediting_228905chr2_188297554_+ENSG00000183765.19ENST00000448511hsa-miR-561-3p28719401287194077mer-m82871940028719419148-9.71
CAediting_1306323chr19_13836462_-ENSG00000183765.19ENST00000448511hsa-miR-27a-3p28696956286969627mer-m82869695528696974157-22.14
CAediting_228905chr2_188297554_+ENSG00000183765.19ENST00000433028hsa-miR-561-3p28724589287245957mer-m82872458828724607147-15.96
CAediting_228905chr2_188297554_+ENSG00000183765.19ENST00000433028hsa-miR-561-3p28719401287194077mer-m82871940028719419148-9.71
CAediting_1306323chr19_13836462_-ENSG00000183765.19ENST00000433028hsa-miR-27a-3p28696956286969627mer-m82869695528696974157-22.14
CAediting_77128chr1_85133844_+ENSG00000183765.19ENST00000454252hsa-miR-4423-3p28727988287279947mer-m82872798728728007142-13.81
CAediting_228905chr2_188297554_+ENSG00000183765.19ENST00000454252hsa-miR-561-3p28725104287251107mer-m82872510328725124150-12.58

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for CHEK2

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for CHEK2

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)

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Relation with cancer stages for CHEK2

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.
STADpathologic_stageCAediting_1469962chr22_28697698_-0.0234080569259211-0.259832360829681

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Relation with survival for CHEK2

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for CHEK2

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status
CHEK2O96017DB12010FostamatinibSerine/threonine-protein kinase Chk2 SmallMoleculeDrugapproved|investigational

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RelatedDiseases for CHEK2

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource
CHEK2C0009405Hereditary Nonpolyposis Colorectal Neoplasms12CLINGEN
CHEK2C1112155Hereditary non-polyposis colorectal cancer syndrome12CLINGEN
CHEK2C1333990Hereditary Nonpolyposis Colorectal Cancer12CLINGEN
CHEK2C1333991Hereditary Non-Polyposis Colon Cancer Type 212CLINGEN
CHEK2C2936783Colorectal cancer, hereditary nonpolyposis, type 112CLINGEN
CHEK2C0346153Breast Cancer, Familial9CLINGEN
CHEK2C0006142Malignant neoplasm of breast7CGI;CTD_human;GENOMICS_ENGLAND;UNIPROT
CHEK2C0678222Breast Carcinoma4CGI;CTD_human
CHEK2C1257931Mammary Neoplasms, Human4CTD_human
CHEK2C1458155Mammary Neoplasms4CTD_human
CHEK2C4704874Mammary Carcinoma, Human4CTD_human
CHEK2C0085390Li-Fraumeni Syndrome3CTD_human;ORPHANET
CHEK2C1836482Li-Fraumeni Syndrome 22CTD_human;GENOMICS_ENGLAND;UNIPROT
CHEK2C0009402Colorectal Carcinoma1CTD_human;GENOMICS_ENGLAND
CHEK2C0009404Colorectal Neoplasms1CTD_human
CHEK2C0024121Lung Neoplasms1CTD_human
CHEK2C0024302Reticulosarcoma1CTD_human
CHEK2C0024304Lymphoma, Mixed-Cell1CTD_human
CHEK2C0024305Lymphoma, Non-Hodgkin1CTD_human
CHEK2C0024306Lymphoma, Undifferentiated1CTD_human
CHEK2C0024623Malignant neoplasm of stomach1CTD_human
CHEK2C0027819Neuroblastoma1CTD_human
CHEK2C0029463Osteosarcoma1CTD_human;GENOMICS_ENGLAND;ORPHANET;UNIPROT
CHEK2C0033578Prostatic Neoplasms1CTD_human
CHEK2C0038356Stomach Neoplasms1CTD_human
CHEK2C0079740High Grade Lymphoma (neoplasm)1CTD_human
CHEK2C0079741Lymphoma, Intermediate-Grade1CTD_human
CHEK2C0079747Low Grade Lymphoma (neoplasm)1CTD_human
CHEK2C0079757Diffuse Mixed-Cell Lymphoma1CTD_human
CHEK2C0079770Lymphoma, Small Noncleaved-Cell1CTD_human
CHEK2C0206720Squamous Cell Neoplasms1CTD_human
CHEK2C0235874Disease Exacerbation1CTD_human
CHEK2C0238033Carcinoma of Male Breast1CTD_human
CHEK2C0242379Malignant neoplasm of lung1CTD_human
CHEK2C0242788Breast Neoplasms, Male1CTD_human
CHEK2C0376358Malignant neoplasm of prostate1CTD_human;GENOMICS_ENGLAND;UNIPROT
CHEK2C0677776Hereditary Breast and Ovarian Cancer Syndrome1ORPHANET
CHEK2C0751688Malignant Squamous Cell Neoplasm1CTD_human
CHEK2C1708349Hereditary Diffuse Gastric Cancer1CTD_human
CHEK2C2931456Prostate cancer, familial1CTD_human;ORPHANET
CHEK2C3714542Lymphoma, Diffuse1CTD_human
CHEK2C4721532Lymphoma, Non-Hodgkin, Familial1CTD_human
CHEK2C4722327PROSTATE CANCER, HEREDITARY, 11CTD_human