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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: RASSF1 (CAeditome ID:11186)

Gene summary for RASSF1

check button Gene summary
Gene informationGene symbol

RASSF1

Gene ID

11186

Gene nameRas association domain family member 1
Synonyms123F2|NORE2A|RASSF1A|RDA32|REH3P21
Cytomap

3p21.31

Type of geneprotein-coding
Descriptionras association domain-containing protein 1Ras association (RalGDS/AF-6) domain family member 1WUGSC:H_LUCA12.5cardiac-specific ras association domain family 1 proteinpancreas-specific ras association domain family 1 proteintumor suppressor protein R
Modification date20210518
UniProtAcc

Q9NS23

Context- 32949393(The Role of RASSF1 Methylation in Lung Carcinoma)

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
RASSF1

GO:0007265

Ras association domain-containing protein 1

15109305

RASSF1

GO:0005634

Ras association domain-containing protein 1

14743218

RASSF1

GO:0015630

Ras association domain-containing protein 1

14743218


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RNA A-to-I events for RASSF1

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000068028.16
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_283413(50332508, -), CAediting_283414(50332521, -), CAediting_283415(50332526, -), CAediting_283416(50332541, -), CAediting_283417(50332542, -), CAediting_283418(50332543, -), CAediting_283419(50332544, -), CAediting_283420(50332552, -), CAediting_283421(50332557, -), CAediting_283422(50332565, -), CAediting_283423(50332569, -), CAediting_283424(50332583, -), CAediting_283425(50332584, -), CAediting_283426(50332585, -), CAediting_283427(50332595, -), CAediting_283428(50332605, -), CAediting_283429(50332615, -), CAediting_283430(50332620, -), CAediting_283431(50332622, -), CAediting_283432(50332625, -), CAediting_283433(50332664, -), CAediting_283434(50332668, -), CAediting_283435(50332670, -), CAediting_283436(50332680, -), CAediting_283437(50332682, -), CAediting_283438(50332692, -), CAediting_283439(50332697, -), CAediting_283440(50332705, -), CAediting_283441(50332708, -), CAediting_283442(50332709, -), CAediting_283443(50332710, -), CAediting_283444(50332723, -), CAediting_283445(50332740, -), CAediting_283446(50332743, -), CAediting_283447(50332748, -), CAediting_283448(50332754, -), CAediting_283449(50332759, -), CAediting_283450(50332766, -), CAediting_283451(50332774, -), CAediting_283452(50332778, -), CAediting_283453(50332789, -), CAediting_283454(50332790, -), CAediting_283455(50332836, -), CAediting_283456(50332838, -), CAediting_283457(50332842, -), CAediting_283458(50332850, -), CAediting_283459(50332851, -), CAediting_283460(50332852, -), CAediting_283461(50332869, -), CAediting_283462(50332873, -), CAediting_283463(50332878, -), CAediting_283464(50332883, -), CAediting_283465(50332892, -), CAediting_283466(50332903, -), CAediting_283467(50332929, -), CAediting_283468(50332932, -), CAediting_283469(50332938, -), CAediting_283470(50332945, -), CAediting_283471(50332946, -), CAediting_283472(50332966, -), CAediting_283473(50332972, -), CAediting_283474(50332982, -), CAediting_283475(50333007, -), CAediting_283476(50333008, -), CAediting_283477(50333011, -), CAediting_283478(50333017, -), CAediting_283479(50333025, -), CAediting_283480(50333042, -), CAediting_283481(50333047, -), CAediting_283482(50333061, -), CAediting_283483(50333109, -), CAediting_283484(50333544, -), CAediting_283485(50333545, -), CAediting_283486(50333562, -), CAediting_283487(50333569, -), CAediting_283488(50333574, -), CAediting_283489(50333582, -), CAediting_283490(50333588, -), CAediting_283491(50333592, -), CAediting_283492(50333598, -), CAediting_283493(50333605, -), CAediting_283494(50333609, -), CAediting_283495(50333615, -), CAediting_283496(50333625, -), CAediting_283497(50333644, -), CAediting_283498(50333647, -), CAediting_283499(50333650, -), CAediting_283500(50333653, -), CAediting_283501(50333656, -), CAediting_283502(50333657, -), CAediting_283503(50333658, -), CAediting_283504(50333659, -), CAediting_283505(50333662, -), CAediting_283506(50333674, -), CAediting_283507(50333683, -), CAediting_283508(50333684, -), CAediting_283509(50333693, -), CAediting_283510(50333696, -), CAediting_283511(50333699, -), CAediting_283512(50333707, -), CAediting_283513(50333712, -), CAediting_283514(50333730, -), CAediting_283515(50333731, -), CAediting_283516(50333736, -), CAediting_283517(50333747, -), CAediting_283518(50333752, -), CAediting_283519(50333753, -), CAediting_283520(50333761, -), CAediting_283521(50333768, -), CAediting_283522(50334987, -), CAediting_283523(50335017, -), CAediting_283524(50335018, -), CAediting_283525(50335022, -), CAediting_283526(50335026, -), CAediting_283527(50335035, -), CAediting_283528(50335042, -), CAediting_283529(50335060, -), CAediting_283530(50335063, -), CAediting_283531(50335087, -), CAediting_283532(50335097, -), CAediting_283533(50335113, -), CAediting_283534(50335123, -), CAediting_283535(50335126, -), CAediting_283536(50335127, -), CAediting_283537(50335132, -), CAediting_283538(50335143, -), CAediting_283539(50335151, -), CAediting_283540(50335152, -), CAediting_283541(50335154, -), CAediting_283542(50335166, -), CAediting_283543(50335169, -), CAediting_283544(50335198, -), CAediting_283545(50335203, -), CAediting_283546(50335212, -), CAediting_283547(50335215, -), CAediting_283548(50335220, -), CAediting_283549(50335221, -), CAediting_283550(50335227, -), CAediting_283551(50335237, -), CAediting_283552(50335243, -), CAediting_283553(50335346, -), CAediting_283554(50335347, -), CAediting_283555(50335364, -), CAediting_283556(50335382, -), CAediting_283557(50335384, -), CAediting_283558(50335389, -), CAediting_283559(50335393, -), CAediting_283560(50335402, -), CAediting_283561(50335404, -), CAediting_283562(50335406, -), CAediting_283563(50335407, -), CAediting_283564(50335413, -), CAediting_283565(50335422, -), CAediting_283566(50335428, -), CAediting_283567(50335432, -), CAediting_283568(50335449, -), CAediting_283569(50335454, -), CAediting_283570(50335455, -), CAediting_283571(50335481, -), CAediting_283572(50335484, -), CAediting_283573(50335486, -), CAediting_283574(50335487, -), CAediting_283575(50335494, -), CAediting_283576(50335512, -), CAediting_283577(50335513, -), CAediting_283578(50335514, -), CAediting_283579(50335518, -), CAediting_283580(50335522, -), CAediting_283581(50335528, -), CAediting_283582(50335535, -), CAediting_283583(50335537, -), CAediting_283584(50335545, -), CAediting_283585(50335546, -), CAediting_283586(50335551, -), CAediting_283587(50335556, -), CAediting_283588(50335565, -), CAediting_283589(50335569, -), CAediting_283590(50335570, -), CAediting_283591(50335575, -), CAediting_283592(50335583, -), CAediting_283593(50335586, -), CAediting_283594(50335591, -), CAediting_283595(50335592, -), CAediting_283596(50335600, -), CAediting_283597(50335620, -), CAediting_283598(50335622, -), CAediting_283599(50335628, -), CAediting_283600(50335630, -), CAediting_283601(50335651, -), CAediting_283602(50335683, -), CAediting_283603(50335684, -), CAediting_283604(50335688, -), CAediting_283605(50335701, -), CAediting_283606(50335705, -), CAediting_283607(50335720, -), CAediting_283608(50335734, -), CAediting_283609(50335738, -), CAediting_283610(50335744, -), CAediting_283611(50335770, -), CAediting_283612(50335773, -), CAediting_283613(50335774, -), CAediting_283614(50335775, -), CAediting_283615(50335785, -), CAediting_283616(50335799, -), CAediting_283617(50335800, -), CAediting_283618(50335807, -), CAediting_283619(50335809, -), CAediting_283620(50335819, -), CAediting_283621(50335824, -), CAediting_283622(50335829, -), CAediting_283623(50335833, -), CAediting_283624(50335857, -), CAediting_283625(50335862, -), CAediting_283626(50335873, -), CAediting_283627(50335879, -), CAediting_283628(50335885, -), CAediting_283629(50335887, -), CAediting_283630(50335900, -), CAediting_283631(50335905, -), CAediting_283632(50335938, -), CAediting_283633(50335970, -), CAediting_283634(50336005, -), CAediting_283635(50336011, -), CAediting_283636(50336012, -), CAediting_283637(50336014, -), CAediting_283638(50336024, -), CAediting_283639(50336031, -), CAediting_283640(50336035, -), CAediting_283641(50336040, -), CAediting_283642(50336041, -), CAediting_283643(50336047, -), CAediting_283644(50336049, -), CAediting_283645(50336063, -), CAediting_283646(50336073, -), CAediting_283647(50338389, -), CAediting_283648(50338547, -), CAediting_283649(50339534, -),

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RNA editing positional annotations for RASSF1 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_283413chr3_50332508_-intronic
CAediting_283414chr3_50332521_-intronic
CAediting_283415chr3_50332526_-intronic
CAediting_283416chr3_50332541_-intronic
CAediting_283417chr3_50332542_-intronic
CAediting_283418chr3_50332543_-intronic
CAediting_283419chr3_50332544_-intronic
CAediting_283420chr3_50332552_-intronic
CAediting_283421chr3_50332557_-intronic
CAediting_283422chr3_50332565_-intronic
CAediting_283423chr3_50332569_-intronic
CAediting_283424chr3_50332583_-intronic
CAediting_283425chr3_50332584_-intronic
CAediting_283426chr3_50332585_-intronic
CAediting_283427chr3_50332595_-intronic
CAediting_283428chr3_50332605_-intronic
CAediting_283429chr3_50332615_-intronic
CAediting_283430chr3_50332620_-intronic
CAediting_283431chr3_50332622_-intronic
CAediting_283432chr3_50332625_-intronic
CAediting_283433chr3_50332664_-intronic
CAediting_283434chr3_50332668_-intronic
CAediting_283435chr3_50332670_-intronic
CAediting_283436chr3_50332680_-intronic
CAediting_283437chr3_50332682_-intronic
CAediting_283438chr3_50332692_-intronic
CAediting_283439chr3_50332697_-intronic
CAediting_283440chr3_50332705_-intronic
CAediting_283441chr3_50332708_-intronic
CAediting_283442chr3_50332709_-intronic
CAediting_283443chr3_50332710_-intronic
CAediting_283444chr3_50332723_-intronic
CAediting_283445chr3_50332740_-intronic
CAediting_283446chr3_50332743_-intronic
CAediting_283447chr3_50332748_-intronic
CAediting_283448chr3_50332754_-intronic
CAediting_283449chr3_50332759_-intronic
CAediting_283450chr3_50332766_-intronic
CAediting_283451chr3_50332774_-intronic
CAediting_283452chr3_50332778_-intronic
CAediting_283453chr3_50332789_-intronic
CAediting_283454chr3_50332790_-intronic
CAediting_283455chr3_50332836_-intronic
CAediting_283456chr3_50332838_-intronic
CAediting_283457chr3_50332842_-intronic
CAediting_283458chr3_50332850_-intronic
CAediting_283459chr3_50332851_-intronic
CAediting_283460chr3_50332852_-intronic
CAediting_283461chr3_50332869_-intronic
CAediting_283462chr3_50332873_-intronic
CAediting_283463chr3_50332878_-intronic
CAediting_283464chr3_50332883_-intronic
CAediting_283465chr3_50332892_-intronic
CAediting_283466chr3_50332903_-intronic
CAediting_283467chr3_50332929_-intronic
CAediting_283468chr3_50332932_-intronic
CAediting_283469chr3_50332938_-intronic
CAediting_283470chr3_50332945_-intronic
CAediting_283471chr3_50332946_-intronic
CAediting_283472chr3_50332966_-intronic
CAediting_283473chr3_50332972_-intronic
CAediting_283474chr3_50332982_-intronic
CAediting_283475chr3_50333007_-intronic
CAediting_283476chr3_50333008_-intronic
CAediting_283477chr3_50333011_-intronic
CAediting_283478chr3_50333017_-intronic
CAediting_283479chr3_50333025_-intronic
CAediting_283480chr3_50333042_-intronic
CAediting_283481chr3_50333047_-intronic
CAediting_283482chr3_50333061_-intronic
CAediting_283483chr3_50333109_-intronic
CAediting_283484chr3_50333544_-intronic
CAediting_283485chr3_50333545_-intronic
CAediting_283486chr3_50333562_-intronic
CAediting_283487chr3_50333569_-intronic
CAediting_283488chr3_50333574_-intronic
CAediting_283489chr3_50333582_-intronic
CAediting_283490chr3_50333588_-intronic
CAediting_283491chr3_50333592_-intronic
CAediting_283492chr3_50333598_-intronic
CAediting_283493chr3_50333605_-intronic
CAediting_283494chr3_50333609_-intronic
CAediting_283495chr3_50333615_-intronic
CAediting_283496chr3_50333625_-intronic
CAediting_283497chr3_50333644_-intronic
CAediting_283498chr3_50333647_-intronic
CAediting_283499chr3_50333650_-intronic
CAediting_283500chr3_50333653_-intronic
CAediting_283501chr3_50333656_-intronic
CAediting_283502chr3_50333657_-intronic
CAediting_283503chr3_50333658_-intronic
CAediting_283504chr3_50333659_-intronic
CAediting_283505chr3_50333662_-intronic
CAediting_283506chr3_50333674_-intronic
CAediting_283507chr3_50333683_-intronic
CAediting_283508chr3_50333684_-intronic
CAediting_283509chr3_50333693_-intronic
CAediting_283510chr3_50333696_-intronic
CAediting_283511chr3_50333699_-intronic
CAediting_283512chr3_50333707_-intronic
CAediting_283513chr3_50333712_-intronic
CAediting_283514chr3_50333730_-intronic
CAediting_283515chr3_50333731_-intronic
CAediting_283516chr3_50333736_-intronic
CAediting_283517chr3_50333747_-intronic
CAediting_283518chr3_50333752_-intronic
CAediting_283519chr3_50333753_-intronic
CAediting_283520chr3_50333761_-intronic
CAediting_283521chr3_50333768_-intronic
CAediting_283522chr3_50334987_-intronic
CAediting_283523chr3_50335017_-intronic
CAediting_283524chr3_50335018_-intronic
CAediting_283525chr3_50335022_-intronic
CAediting_283526chr3_50335026_-intronic
CAediting_283527chr3_50335035_-intronic
CAediting_283528chr3_50335042_-intronic
CAediting_283529chr3_50335060_-intronic
CAediting_283530chr3_50335063_-intronic
CAediting_283531chr3_50335087_-intronic
CAediting_283532chr3_50335097_-intronic
CAediting_283533chr3_50335113_-intronic
CAediting_283534chr3_50335123_-intronic
CAediting_283535chr3_50335126_-intronic
CAediting_283536chr3_50335127_-intronic
CAediting_283537chr3_50335132_-intronic
CAediting_283538chr3_50335143_-intronic
CAediting_283539chr3_50335151_-intronic
CAediting_283540chr3_50335152_-intronic
CAediting_283541chr3_50335154_-intronic
CAediting_283542chr3_50335166_-intronic
CAediting_283543chr3_50335169_-intronic
CAediting_283544chr3_50335198_-intronic
CAediting_283545chr3_50335203_-intronic
CAediting_283546chr3_50335212_-intronic
CAediting_283547chr3_50335215_-intronic
CAediting_283548chr3_50335220_-intronic
CAediting_283549chr3_50335221_-intronic
CAediting_283550chr3_50335227_-intronic
CAediting_283551chr3_50335237_-intronic
CAediting_283552chr3_50335243_-intronic
CAediting_283553chr3_50335346_-intronic
CAediting_283554chr3_50335347_-intronic
CAediting_283555chr3_50335364_-intronic
CAediting_283556chr3_50335382_-intronic
CAediting_283557chr3_50335384_-intronic
CAediting_283558chr3_50335389_-intronic
CAediting_283559chr3_50335393_-intronic
CAediting_283560chr3_50335402_-intronic
CAediting_283561chr3_50335404_-intronic
CAediting_283562chr3_50335406_-intronic
CAediting_283563chr3_50335407_-intronic
CAediting_283564chr3_50335413_-intronic
CAediting_283565chr3_50335422_-intronic
CAediting_283566chr3_50335428_-intronic
CAediting_283567chr3_50335432_-intronic
CAediting_283568chr3_50335449_-intronic
CAediting_283569chr3_50335454_-intronic
CAediting_283570chr3_50335455_-intronic
CAediting_283571chr3_50335481_-intronic
CAediting_283572chr3_50335484_-intronic
CAediting_283573chr3_50335486_-intronic
CAediting_283574chr3_50335487_-intronic
CAediting_283575chr3_50335494_-intronic
CAediting_283576chr3_50335512_-intronic
CAediting_283577chr3_50335513_-intronic
CAediting_283578chr3_50335514_-intronic
CAediting_283579chr3_50335518_-intronic
CAediting_283580chr3_50335522_-intronic
CAediting_283581chr3_50335528_-intronic
CAediting_283582chr3_50335535_-intronic
CAediting_283583chr3_50335537_-intronic
CAediting_283584chr3_50335545_-intronic
CAediting_283585chr3_50335546_-intronic
CAediting_283586chr3_50335551_-intronic
CAediting_283587chr3_50335556_-intronic
CAediting_283588chr3_50335565_-intronic
CAediting_283589chr3_50335569_-intronic
CAediting_283590chr3_50335570_-intronic
CAediting_283591chr3_50335575_-intronic
CAediting_283592chr3_50335583_-intronic
CAediting_283593chr3_50335586_-intronic
CAediting_283594chr3_50335591_-intronic
CAediting_283595chr3_50335592_-intronic
CAediting_283596chr3_50335600_-intronic
CAediting_283597chr3_50335620_-intronic
CAediting_283598chr3_50335622_-intronic
CAediting_283599chr3_50335628_-intronic
CAediting_283600chr3_50335630_-intronic
CAediting_283601chr3_50335651_-intronic
CAediting_283602chr3_50335683_-intronic
CAediting_283603chr3_50335684_-intronic
CAediting_283604chr3_50335688_-intronic
CAediting_283605chr3_50335701_-intronic
CAediting_283606chr3_50335705_-intronic
CAediting_283607chr3_50335720_-intronic
CAediting_283608chr3_50335734_-intronic
CAediting_283609chr3_50335738_-intronic
CAediting_283610chr3_50335744_-intronic
CAediting_283611chr3_50335770_-intronic
CAediting_283612chr3_50335773_-intronic
CAediting_283613chr3_50335774_-intronic
CAediting_283614chr3_50335775_-intronic
CAediting_283615chr3_50335785_-intronic
CAediting_283616chr3_50335799_-intronic
CAediting_283617chr3_50335800_-intronic
CAediting_283618chr3_50335807_-intronic
CAediting_283619chr3_50335809_-intronic
CAediting_283620chr3_50335819_-intronic
CAediting_283621chr3_50335824_-intronic
CAediting_283622chr3_50335829_-intronic
CAediting_283623chr3_50335833_-intronic
CAediting_283624chr3_50335857_-intronic
CAediting_283625chr3_50335862_-intronic
CAediting_283626chr3_50335873_-intronic
CAediting_283627chr3_50335879_-intronic
CAediting_283628chr3_50335885_-intronic
CAediting_283629chr3_50335887_-intronic
CAediting_283630chr3_50335900_-intronic
CAediting_283631chr3_50335905_-intronic
CAediting_283632chr3_50335938_-intronic
CAediting_283633chr3_50335970_-intronic
CAediting_283634chr3_50336005_-intronic
CAediting_283635chr3_50336011_-intronic
CAediting_283636chr3_50336012_-intronic
CAediting_283637chr3_50336014_-intronic
CAediting_283638chr3_50336024_-intronic
CAediting_283639chr3_50336031_-intronic
CAediting_283640chr3_50336035_-intronic
CAediting_283641chr3_50336040_-intronic
CAediting_283642chr3_50336041_-intronic
CAediting_283643chr3_50336047_-intronic
CAediting_283644chr3_50336049_-intronic
CAediting_283645chr3_50336063_-intronic
CAediting_283646chr3_50336073_-intronic
CAediting_283647chr3_50338389_-ncRNA_intronic
CAediting_283648chr3_50338547_-ncRNA_intronic
CAediting_283649chr3_50339534_-ncRNA_intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_283413chr3_50332508_-SINEAluAluJo
CAediting_283414chr3_50332521_-SINEAluAluJo
CAediting_283415chr3_50332526_-SINEAluAluJo
CAediting_283416chr3_50332541_-SINEAluAluJo
CAediting_283417chr3_50332542_-SINEAluAluJo
CAediting_283418chr3_50332543_-SINEAluAluJo
CAediting_283419chr3_50332544_-SINEAluAluJo
CAediting_283420chr3_50332552_-SINEAluAluJo
CAediting_283421chr3_50332557_-SINEAluAluJo
CAediting_283422chr3_50332565_-SINEAluAluJo
CAediting_283423chr3_50332569_-SINEAluAluJo
CAediting_283424chr3_50332583_-SINEAluAluJo
CAediting_283425chr3_50332584_-SINEAluAluJo
CAediting_283426chr3_50332585_-SINEAluAluJo
CAediting_283427chr3_50332595_-SINEAluAluJo
CAediting_283428chr3_50332605_-SINEAluAluJo
CAediting_283429chr3_50332615_-SINEAluAluJo
CAediting_283430chr3_50332620_-SINEAluAluJo
CAediting_283431chr3_50332622_-SINEAluAluJo
CAediting_283432chr3_50332625_-SINEAluAluJo
CAediting_283433chr3_50332664_-SINEAluAluJo
CAediting_283434chr3_50332668_-SINEAluAluJo
CAediting_283435chr3_50332670_-SINEAluAluJo
CAediting_283436chr3_50332680_-SINEAluAluJo
CAediting_283437chr3_50332682_-SINEAluAluJo
CAediting_283438chr3_50332692_-SINEAluAluJo
CAediting_283439chr3_50332697_-SINEAluAluJo
CAediting_283440chr3_50332705_-SINEAluAluJo
CAediting_283441chr3_50332708_-SINEAluAluJo
CAediting_283442chr3_50332709_-SINEAluAluJo
CAediting_283443chr3_50332710_-SINEAluAluJo
CAediting_283444chr3_50332723_-SINEAluAluJo
CAediting_283445chr3_50332740_-SINEAluAluJo
CAediting_283446chr3_50332743_-SINEAluAluJo
CAediting_283447chr3_50332748_-SINEAluAluJo
CAediting_283448chr3_50332754_-SINEAluAluJo
CAediting_283449chr3_50332759_-SINEAluAluJo
CAediting_283450chr3_50332766_-SINEAluAluJo
CAediting_283451chr3_50332774_-SINEAluAluJo
CAediting_283452chr3_50332778_-SINEAluAluJo
CAediting_283453chr3_50332789_-SINEAluAluJo
CAediting_283454chr3_50332790_-SINEAluAluJo
CAediting_283455chr3_50332836_-SINEAluAluSp
CAediting_283456chr3_50332838_-SINEAluAluSp
CAediting_283457chr3_50332842_-SINEAluAluSp
CAediting_283458chr3_50332850_-SINEAluAluSp
CAediting_283459chr3_50332851_-SINEAluAluSp
CAediting_283460chr3_50332852_-SINEAluAluSp
CAediting_283461chr3_50332869_-SINEAluAluSp
CAediting_283462chr3_50332873_-SINEAluAluSp
CAediting_283463chr3_50332878_-SINEAluAluSp
CAediting_283464chr3_50332883_-SINEAluAluSp
CAediting_283465chr3_50332892_-SINEAluAluSp
CAediting_283466chr3_50332903_-SINEAluAluSp
CAediting_283467chr3_50332929_-SINEAluAluSp
CAediting_283468chr3_50332932_-SINEAluAluSp
CAediting_283469chr3_50332938_-SINEAluAluSp
CAediting_283470chr3_50332945_-SINEAluAluSp
CAediting_283471chr3_50332946_-SINEAluAluSp
CAediting_283472chr3_50332966_-SINEAluAluSp
CAediting_283473chr3_50332972_-SINEAluAluSp
CAediting_283474chr3_50332982_-SINEAluAluSp
CAediting_283475chr3_50333007_-SINEAluAluSp
CAediting_283476chr3_50333008_-SINEAluAluSp
CAediting_283477chr3_50333011_-SINEAluAluSp
CAediting_283478chr3_50333017_-SINEAluAluSp
CAediting_283479chr3_50333025_-SINEAluAluSp
CAediting_283480chr3_50333042_-SINEAluAluSp
CAediting_283481chr3_50333047_-SINEAluAluSp
CAediting_283482chr3_50333061_-SINEAluAluSp
CAediting_283484chr3_50333544_-SINEAluAluSz
CAediting_283485chr3_50333545_-SINEAluAluSz
CAediting_283486chr3_50333562_-SINEAluAluSz
CAediting_283487chr3_50333569_-SINEAluAluSz
CAediting_283488chr3_50333574_-SINEAluAluSz
CAediting_283489chr3_50333582_-SINEAluAluSz
CAediting_283490chr3_50333588_-SINEAluAluSz
CAediting_283491chr3_50333592_-SINEAluAluSz
CAediting_283492chr3_50333598_-SINEAluAluSz
CAediting_283493chr3_50333605_-SINEAluAluSz
CAediting_283494chr3_50333609_-SINEAluAluSz
CAediting_283495chr3_50333615_-SINEAluAluSz
CAediting_283496chr3_50333625_-SINEAluAluSz
CAediting_283497chr3_50333644_-SINEAluAluSz
CAediting_283498chr3_50333647_-SINEAluAluSz
CAediting_283499chr3_50333650_-SINEAluAluSz
CAediting_283500chr3_50333653_-SINEAluAluSz
CAediting_283501chr3_50333656_-SINEAluAluSz
CAediting_283502chr3_50333657_-SINEAluAluSz
CAediting_283503chr3_50333658_-SINEAluAluSz
CAediting_283504chr3_50333659_-SINEAluAluSz
CAediting_283505chr3_50333662_-SINEAluAluSz
CAediting_283506chr3_50333674_-SINEAluAluSz
CAediting_283507chr3_50333683_-SINEAluAluSz
CAediting_283508chr3_50333684_-SINEAluAluSz
CAediting_283509chr3_50333693_-SINEAluAluSz
CAediting_283510chr3_50333696_-SINEAluAluSz
CAediting_283511chr3_50333699_-SINEAluAluSz
CAediting_283512chr3_50333707_-SINEAluAluSz
CAediting_283513chr3_50333712_-SINEAluAluSz
CAediting_283514chr3_50333730_-SINEAluAluSz
CAediting_283515chr3_50333731_-SINEAluAluSz
CAediting_283516chr3_50333736_-SINEAluAluSz
CAediting_283517chr3_50333747_-SINEAluAluSz
CAediting_283518chr3_50333752_-SINEAluAluSz
CAediting_283519chr3_50333753_-SINEAluAluSz
CAediting_283520chr3_50333761_-SINEAluAluSz
CAediting_283521chr3_50333768_-SINEAluAluSz
CAediting_283522chr3_50334987_-SINEAluAluSg7
CAediting_283523chr3_50335017_-SINEAluAluSg7
CAediting_283524chr3_50335018_-SINEAluAluSg7
CAediting_283525chr3_50335022_-SINEAluAluSg7
CAediting_283526chr3_50335026_-SINEAluAluSg7
CAediting_283527chr3_50335035_-SINEAluAluSg7
CAediting_283528chr3_50335042_-SINEAluAluSg7
CAediting_283529chr3_50335060_-SINEAluAluSg7
CAediting_283530chr3_50335063_-SINEAluAluSg7
CAediting_283531chr3_50335087_-SINEAluAluSg7
CAediting_283532chr3_50335097_-SINEAluAluSg7
CAediting_283533chr3_50335113_-SINEAluAluSg7
CAediting_283534chr3_50335123_-SINEAluAluSg7
CAediting_283535chr3_50335126_-SINEAluAluSg7
CAediting_283536chr3_50335127_-SINEAluAluSg7
CAediting_283537chr3_50335132_-SINEAluAluSg7
CAediting_283538chr3_50335143_-SINEAluAluSg7
CAediting_283539chr3_50335151_-SINEAluAluSg7
CAediting_283540chr3_50335152_-SINEAluAluSg7
CAediting_283541chr3_50335154_-SINEAluAluSg7
CAediting_283542chr3_50335166_-SINEAluAluSg7
CAediting_283543chr3_50335169_-SINEAluAluSg7
CAediting_283544chr3_50335198_-SINEAluAluSg7
CAediting_283545chr3_50335203_-SINEAluAluSg7
CAediting_283546chr3_50335212_-SINEAluAluSg7
CAediting_283547chr3_50335215_-SINEAluAluSg7
CAediting_283548chr3_50335220_-SINEAluAluSg7
CAediting_283549chr3_50335221_-SINEAluAluSg7
CAediting_283550chr3_50335227_-SINEAluAluSg7
CAediting_283551chr3_50335237_-SINEAluAluSg7
CAediting_283552chr3_50335243_-SINEAluAluSg7
CAediting_283553chr3_50335346_-SINEAluAluSz6
CAediting_283554chr3_50335347_-SINEAluAluSz6
CAediting_283555chr3_50335364_-SINEAluAluSz6
CAediting_283556chr3_50335382_-SINEAluAluSz6
CAediting_283557chr3_50335384_-SINEAluAluSz6
CAediting_283558chr3_50335389_-SINEAluAluSz6
CAediting_283559chr3_50335393_-SINEAluAluSz6
CAediting_283560chr3_50335402_-SINEAluAluSz6
CAediting_283561chr3_50335404_-SINEAluAluSz6
CAediting_283562chr3_50335406_-SINEAluAluSz6
CAediting_283563chr3_50335407_-SINEAluAluSz6
CAediting_283564chr3_50335413_-SINEAluAluSz6
CAediting_283565chr3_50335422_-SINEAluAluSz6
CAediting_283566chr3_50335428_-SINEAluAluSz6
CAediting_283567chr3_50335432_-SINEAluAluSz6
CAediting_283568chr3_50335449_-SINEAluAluSz6
CAediting_283569chr3_50335454_-SINEAluAluSz6
CAediting_283570chr3_50335455_-SINEAluAluSz6
CAediting_283571chr3_50335481_-SINEAluAluSz6
CAediting_283572chr3_50335484_-SINEAluAluSz6
CAediting_283573chr3_50335486_-SINEAluAluSz6
CAediting_283574chr3_50335487_-SINEAluAluSz6
CAediting_283575chr3_50335494_-SINEAluAluSz6
CAediting_283576chr3_50335512_-SINEAluAluSz6
CAediting_283577chr3_50335513_-SINEAluAluSz6
CAediting_283578chr3_50335514_-SINEAluAluSz6
CAediting_283579chr3_50335518_-SINEAluAluSz6
CAediting_283580chr3_50335522_-SINEAluAluSz6
CAediting_283581chr3_50335528_-SINEAluAluSz6
CAediting_283582chr3_50335535_-SINEAluAluSz6
CAediting_283583chr3_50335537_-SINEAluAluSz6
CAediting_283584chr3_50335545_-SINEAluAluSz6
CAediting_283585chr3_50335546_-SINEAluAluSz6
CAediting_283586chr3_50335551_-SINEAluAluSz6
CAediting_283587chr3_50335556_-SINEAluAluSz6
CAediting_283588chr3_50335565_-SINEAluAluSz6
CAediting_283589chr3_50335569_-SINEAluAluSz6
CAediting_283590chr3_50335570_-SINEAluAluSz6
CAediting_283591chr3_50335575_-SINEAluAluSz6
CAediting_283592chr3_50335583_-SINEAluAluSz6
CAediting_283593chr3_50335586_-SINEAluAluSz6
CAediting_283594chr3_50335591_-SINEAluAluSz6
CAediting_283595chr3_50335592_-SINEAluAluSz6
CAediting_283596chr3_50335600_-SINEAluAluSz6
CAediting_283597chr3_50335620_-SINEAluAluSz
CAediting_283598chr3_50335622_-SINEAluAluSz
CAediting_283599chr3_50335628_-SINEAluAluSz
CAediting_283600chr3_50335630_-SINEAluAluSz
CAediting_283601chr3_50335651_-SINEAluAluSz
CAediting_283602chr3_50335683_-SINEAluAluSz
CAediting_283603chr3_50335684_-SINEAluAluSz
CAediting_283604chr3_50335688_-SINEAluAluSz
CAediting_283605chr3_50335701_-SINEAluAluSz
CAediting_283606chr3_50335705_-SINEAluAluSz
CAediting_283607chr3_50335720_-SINEAluAluSz
CAediting_283608chr3_50335734_-SINEAluAluSz
CAediting_283609chr3_50335738_-SINEAluAluSz
CAediting_283610chr3_50335744_-SINEAluAluSz
CAediting_283611chr3_50335770_-SINEAluAluSz
CAediting_283612chr3_50335773_-SINEAluAluSz
CAediting_283613chr3_50335774_-SINEAluAluSz
CAediting_283614chr3_50335775_-SINEAluAluSz
CAediting_283615chr3_50335785_-SINEAluAluSz
CAediting_283616chr3_50335799_-SINEAluAluSz
CAediting_283617chr3_50335800_-SINEAluAluSz
CAediting_283618chr3_50335807_-SINEAluAluSz
CAediting_283619chr3_50335809_-SINEAluAluSz
CAediting_283620chr3_50335819_-SINEAluAluSz
CAediting_283621chr3_50335824_-SINEAluAluSz
CAediting_283622chr3_50335829_-SINEAluAluSz
CAediting_283623chr3_50335833_-SINEAluAluSz
CAediting_283624chr3_50335857_-SINEAluAluSz
CAediting_283625chr3_50335862_-SINEAluAluSz
CAediting_283626chr3_50335873_-SINEAluAluSz
CAediting_283627chr3_50335879_-SINEAluAluSz
CAediting_283628chr3_50335885_-SINEAluAluSz
CAediting_283629chr3_50335887_-SINEAluAluSz
CAediting_283630chr3_50335900_-SINEAluAluSz
CAediting_283631chr3_50335905_-SINEAluAluSx
CAediting_283632chr3_50335938_-SINEAluAluSx
CAediting_283633chr3_50335970_-SINEAluAluSx
CAediting_283634chr3_50336005_-SINEAluAluSx
CAediting_283635chr3_50336011_-SINEAluAluSx
CAediting_283636chr3_50336012_-SINEAluAluSx
CAediting_283637chr3_50336014_-SINEAluAluSx
CAediting_283638chr3_50336024_-SINEAluAluSx
CAediting_283639chr3_50336031_-SINEAluAluSx
CAediting_283640chr3_50336035_-SINEAluAluSx
CAediting_283641chr3_50336040_-SINEAluAluSx
CAediting_283642chr3_50336041_-SINEAluAluSx
CAediting_283643chr3_50336047_-SINEAluAluSx
CAediting_283644chr3_50336049_-SINEAluAluSx
CAediting_283647chr3_50338389_-SINEAluAluSq2
CAediting_283648chr3_50338547_-SINEAluAluSq2
CAediting_283649chr3_50339534_-SINEAluAluSx1

Top

RNA A-to-I editing events in the alternative splicing sites for RASSF1

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength
IRCAediting_283414chr3_50332521_-50332518:503325265SS0+3iATGTGAGCC-14.2ATGTGGGCC-18.56
IRCAediting_283415chr3_50332526_-50332518:503325265SS3+0iATGTGAGCC-14.2GTGTGAGCC-16.34

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000068028.16.RASSF1.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000068028.16.RASSF1.

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for RASSF1

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.
LUSC.CAediting_283435.ENSG00000068028.RASSF1.png
Soverview
PAAD.CAediting_283420.ENSG00000068028.RASSF1.png
Soverview
SARC.CAediting_283441.ENSG00000068028.RASSF1.png
Soverview
SKCM.CAediting_283427.ENSG00000068028.RASSF1.png
Soverview
STAD.CAediting_283426.ENSG00000068028.RASSF1.png
Soverview

Top

Protein coding region RNA A-to-I editings for RASSF1

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


Top

The effects of the RNA editing to the miRNA binding sites for RASSF1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_748296chr10_51299626_+ENSG00000068028.16ENST00000327761hsa-miR-605-3p50330373503303808mer-1a5033037350330394140-15.15
CAediting_688080chr9_63819626_+ENSG00000068028.16ENST00000327761hsa-miR-4477b50330289503302957mer-m85033028850330309168-19.96
CAediting_748296chr10_51299626_+ENSG00000068028.16ENST00000616212hsa-miR-605-3p50330373503303808mer-1a5033037350330394140-15.15
CAediting_688080chr9_63819626_+ENSG00000068028.16ENST00000616212hsa-miR-4477b50330289503302957mer-m85033028850330309168-19.96
CAediting_748296chr10_51299626_+ENSG00000068028.16ENST00000395126hsa-miR-605-3p50330373503303808mer-1a5033037350330394140-15.15
CAediting_688080chr9_63819626_+ENSG00000068028.16ENST00000395126hsa-miR-4477b50330289503302957mer-m85033028850330309168-19.96
CAediting_748296chr10_51299626_+ENSG00000068028.16ENST00000357043hsa-miR-605-3p50330373503303808mer-1a5033037350330394140-15.15
CAediting_688080chr9_63819626_+ENSG00000068028.16ENST00000357043hsa-miR-4477b50330289503302957mer-m85033028850330309168-19.96
CAediting_748296chr10_51299626_+ENSG00000068028.16ENST00000395117hsa-miR-605-3p50331786503317927mer-m85033178550331804153-22.34
CAediting_748296chr10_51299626_+ENSG00000068028.16ENST00000395117hsa-miR-605-3p50330373503303808mer-1a5033037350330394140-15.15
CAediting_688080chr9_63819626_+ENSG00000068028.16ENST00000395117hsa-miR-4477b50330289503302957mer-m85033028850330309168-19.96
CAediting_748296chr10_51299626_+ENSG00000068028.16ENST00000359365hsa-miR-605-3p50330373503303808mer-1a5033037350330394140-15.15
CAediting_688080chr9_63819626_+ENSG00000068028.16ENST00000359365hsa-miR-4477b50330289503302957mer-m85033028850330309168-19.96
CAediting_748296chr10_51299626_+ENSG00000068028.16ENST00000482447hsa-miR-605-3p50330373503303808mer-1a5033037350330394140-15.15
CAediting_688080chr9_63819626_+ENSG00000068028.16ENST00000482447hsa-miR-4477b50330289503302957mer-m85033028850330309168-19.96
CAediting_414656chr5_72878640_+ENSG00000068028.16ENST00000395117hsa-miR-4804-3p50331681503316888mer-1a5033168150331701150-17.26

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1054808chr15_66496985_-ENSG00000068028.16ENST00000395117hsa-miR-451250330603503306097mer-m85033060250330622155-22.91
CAediting_1054808chr15_66496985_-ENSG00000068028.16ENST00000482447hsa-miR-451250330603503306097mer-m85033060250330622155-22.91

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for RASSF1

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for RASSF1

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
ESCACAediting_283420chr3_50332552_-..0.02110643934455210.304889771840724..
CESCCAediting_283421chr3_50332557_-0.0173488303707350.306181465345854....
LUSCCAediting_283421chr3_50332557_-..0.02223040592550310.287701762275411..
ESCACAediting_283421chr3_50332557_-..0.01435608118917330.322698068250981..
ESCACAediting_283426chr3_50332585_-..0.01708604346226850.332622062830039..
ESCACAediting_283427chr3_50332595_-..0.004541624339568480.367494498382328..
OVCAediting_283427chr3_50332595_-0.04830242548340780.222919864229571....
BRCACAediting_283441chr3_50332708_-0.01182812455482710.183740239920307....
BRCACAediting_283452chr3_50332778_-0.02222388618725780.182408008601397....
ESCACAediting_283579chr3_50335518_-..0.002175478570891930.370830492917083..

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Relation with cancer stages for RASSF1

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.
BRCApathologic_stageCAediting_283420chr3_50332552_-0.04995702315814770.143572767300478
BRCApathologic_stageCAediting_283421chr3_50332557_-0.02653615017607160.163991467909932
BRCApathologic_stageCAediting_283493chr3_50333605_-0.02092900783198110.283801323248044
ESCAclinical_stageCAediting_283441chr3_50332708_-0.0206029596164094-0.572003328029045
KIRCpathologic_stageCAediting_283420chr3_50332552_-0.009797402387940120.20688851797474
KIRCpathologic_stageCAediting_283421chr3_50332557_-0.03312702812611120.177678365789282
KIRCpathologic_stageCAediting_283426chr3_50332585_-0.02766922096894390.214942473691364
KIRCpathologic_stageCAediting_283427chr3_50332595_-0.003917480605646060.260410896274145
KIRCpathologic_stageCAediting_283435chr3_50332670_-0.009255734113321370.199066597373005
KIRCpathologic_stageCAediting_283439chr3_50332697_-0.002281595321959270.342694052980492
KIRCpathologic_stageCAediting_283441chr3_50332708_-0.007454307641067280.234580668921615
KIRCpathologic_stageCAediting_283445chr3_50332740_-0.001802190278468420.246412369744288
LUSCpathologic_stageCAediting_283421chr3_50332557_-0.0227455796191657-0.286650222124482

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Relation with survival for RASSF1

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR
BRCACAediting_283441chr3_50332708_-0.02515929755809350.0318082189.563
KIRCCAediting_283427chr3_50332595_-0.03557907640787170.04401740.0927858

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RelatedDrugs for RASSF1

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for RASSF1

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource
RASSF1C0025500Mesothelioma2CTD_human
RASSF1C0001418Adenocarcinoma1CTD_human
RASSF1C0005684Malignant neoplasm of urinary bladder1CTD_human
RASSF1C0005686Urinary Bladder Diseases1CTD_human
RASSF1C0005695Bladder Neoplasm1CTD_human
RASSF1C0007131Non-Small Cell Lung Carcinoma1CTD_human
RASSF1C0007194Hypertrophic Cardiomyopathy1CTD_human
RASSF1C0021390Inflammatory Bowel Diseases1CTD_human
RASSF1C0024121Lung Neoplasms1CTD_human
RASSF1C0024667Animal Mammary Neoplasms1CTD_human
RASSF1C0025149Medulloblastoma1CTD_human
RASSF1C0036323Schistosomiasis1CTD_human
RASSF1C0205641Adenocarcinoma, Basal Cell1CTD_human
RASSF1C0205642Adenocarcinoma, Oxyphilic1CTD_human
RASSF1C0205643Carcinoma, Cribriform1CTD_human
RASSF1C0205644Carcinoma, Granular Cell1CTD_human
RASSF1C0205645Adenocarcinoma, Tubular1CTD_human
RASSF1C0205833Medullomyoblastoma1CTD_human
RASSF1C0242379Malignant neoplasm of lung1CTD_human
RASSF1C0278510Childhood Medulloblastoma1CTD_human
RASSF1C0278876Adult Medulloblastoma1CTD_human
RASSF1C0751291Desmoplastic Medulloblastoma1CTD_human
RASSF1C1257925Mammary Carcinoma, Animal1CTD_human
RASSF1C1275668Melanotic medulloblastoma1CTD_human
RASSF1C1449861Micronuclei, Chromosome-Defective1CTD_human
RASSF1C1449862Micronuclei, Genotoxicant-Induced1CTD_human
RASSF1C4551472Hypertrophic obstructive cardiomyopathy1CTD_human