Home

Download

Statistics

Examples

Help

Contact

Editing gene: RCAN3 (CAeditome ID:11123)

Gene summary for RCAN3

Gene summary

Gene information	Gene symbol	RCAN3
	Gene ID	11123
	Gene name	RCAN family member 3
	Synonyms	DSCR1L2\|MCIP3\|RCN3\|hRCN3
	Cytomap	1p36.11
	Type of gene	protein-coding
	Description	calcipressin-3Down syndrome candidate region 1-like 2Down syndrome critical region gene 1-like 2down syndrome candidate region 1-like protein 2myocyte-enriched calcineurin-interacting protein 3
	Modification date	20210518
	UniProtAcc	Q9UKA8
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

Top

RNA A-to-I events for RCAN3

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000117602.10

RNA A-to-I editing events in Cancer.

CAediting_27051(24508965, +), CAediting_27052(24516049, +), CAediting_27053(24516075, +), CAediting_27054(24518891, +), CAediting_27055(24518907, +), CAediting_27056(24526231, +), CAediting_27057(24526336, +), CAediting_27058(24527087, +), CAediting_27059(24529328, +), CAediting_27060(24529371, +), CAediting_27061(24529419, +), CAediting_27062(24529442, +), CAediting_27063(24529644, +), CAediting_27064(24529690, +), CAediting_27065(24530091, +), CAediting_27066(24530175, +), CAediting_27067(24530176, +), CAediting_27068(24530177, +), CAediting_27069(24530224, +), CAediting_27070(24530232, +), CAediting_27071(24530248, +), CAediting_27072(24530249, +), CAediting_27073(24530252, +), CAediting_27074(24530275, +), CAediting_27075(24530276, +), CAediting_27076(24530281, +), CAediting_27077(24530305, +), CAediting_27078(24532266, +), CAediting_27079(24532286, +), CAediting_27080(24532296, +), CAediting_27081(24532304, +), CAediting_27082(24532320, +), CAediting_27083(24532352, +), CAediting_27084(24532366, +), CAediting_27085(24532368, +), CAediting_27086(24532379, +), CAediting_27087(24532384, +), CAediting_27088(24532410, +), CAediting_27089(24532416, +), CAediting_27090(24532427, +), CAediting_27091(24532436, +), CAediting_27092(24532447, +), CAediting_27093(24532501, +), CAediting_27094(24532666, +), CAediting_27095(24532685, +), CAediting_27096(24532693, +), CAediting_27097(24532694, +), CAediting_27098(24532733, +), CAediting_27099(24532746, +), CAediting_27100(24532761, +), CAediting_27101(24532763, +), CAediting_27102(24532770, +), CAediting_27103(24532771, +), CAediting_27104(24532785, +), CAediting_27105(24532802, +), CAediting_27106(24532805, +), CAediting_27107(24532819, +), CAediting_27108(24532825, +), CAediting_27109(24532831, +), CAediting_27110(24532837, +), CAediting_27111(24532841, +), CAediting_27112(24532858, +), CAediting_27113(24532870, +), CAediting_27114(24532890, +), CAediting_27115(24532894, +), CAediting_27116(24532933, +), CAediting_27117(24537621, +), CAediting_27118(24537635, +), CAediting_27119(24537637, +), CAediting_27120(24537642, +), CAediting_27121(24537643, +), CAediting_27122(24537648, +), CAediting_27123(24537651, +), CAediting_27124(24537689, +), CAediting_27125(24537692, +), CAediting_27126(24537697, +), CAediting_27127(24537698, +), CAediting_27128(24537709, +), CAediting_27129(24537712, +), CAediting_27130(24537713, +), CAediting_27131(24537715, +), CAediting_27132(24537721, +), CAediting_27133(24537723, +), CAediting_27134(24537738, +), CAediting_27135(24537739, +), CAediting_27136(24537741, +), CAediting_27137(24537742, +), CAediting_27138(24537748, +), CAediting_27139(24537753, +), CAediting_27140(24537769, +), CAediting_27141(24537771, +), CAediting_27142(24537779, +), CAediting_27143(24537780, +), CAediting_27144(24537785, +), CAediting_27145(24537789, +), CAediting_27146(24537796, +), CAediting_27147(24537802, +), CAediting_27148(24537806, +), CAediting_27149(24537809, +), CAediting_27150(24537812, +), CAediting_27151(24537821, +), CAediting_27152(24537827, +), CAediting_27153(24537829, +), CAediting_27154(24537849, +), CAediting_27155(24537854, +), CAediting_27156(24537864, +), CAediting_27157(24537869, +), CAediting_27158(24537878, +), CAediting_27159(24537879, +), CAediting_27160(24537888, +), CAediting_27161(24538424, +), CAediting_27162(24538426, +), CAediting_27163(24538430, +), CAediting_27164(24538460, +), CAediting_27165(24538469, +), CAediting_27166(24538479, +), CAediting_27167(24538509, +), CAediting_27168(24538522, +), CAediting_27169(24538531, +), CAediting_27170(24538544, +), CAediting_27171(24538546, +), CAediting_27172(24538594, +), CAediting_27173(24538595, +), CAediting_27174(24538598, +), CAediting_27175(24538612, +), CAediting_27176(24538615, +), CAediting_27177(24538624, +), CAediting_27178(24538627, +), CAediting_27179(24538636, +), CAediting_27180(24538648, +), CAediting_27181(24538652, +), CAediting_27182(24538673, +), CAediting_27183(24538674, +), CAediting_27184(24538675, +), CAediting_27185(24538698, +), CAediting_27186(24538702, +),

Top

RNA editing positional annotations for RCAN3 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_27051	chr1_24508965_+	intronic
CAediting_27052	chr1_24516049_+	intronic
CAediting_27053	chr1_24516075_+	intronic
CAediting_27054	chr1_24518891_+	intronic
CAediting_27055	chr1_24518907_+	intronic
CAediting_27056	chr1_24526231_+	intronic
CAediting_27057	chr1_24526336_+	intronic
CAediting_27058	chr1_24527087_+	intronic
CAediting_27059	chr1_24529328_+	intronic
CAediting_27060	chr1_24529371_+	intronic
CAediting_27061	chr1_24529419_+	intronic
CAediting_27062	chr1_24529442_+	intronic
CAediting_27063	chr1_24529644_+	intronic
CAediting_27064	chr1_24529690_+	intronic
CAediting_27065	chr1_24530091_+	intronic
CAediting_27066	chr1_24530175_+	intronic
CAediting_27067	chr1_24530176_+	intronic
CAediting_27068	chr1_24530177_+	intronic
CAediting_27069	chr1_24530224_+	intronic
CAediting_27070	chr1_24530232_+	intronic
CAediting_27071	chr1_24530248_+	intronic
CAediting_27072	chr1_24530249_+	intronic
CAediting_27073	chr1_24530252_+	intronic
CAediting_27074	chr1_24530275_+	intronic
CAediting_27075	chr1_24530276_+	intronic
CAediting_27076	chr1_24530281_+	intronic
CAediting_27077	chr1_24530305_+	intronic
CAediting_27078	chr1_24532266_+	intronic
CAediting_27079	chr1_24532286_+	intronic
CAediting_27080	chr1_24532296_+	intronic
CAediting_27081	chr1_24532304_+	intronic
CAediting_27082	chr1_24532320_+	intronic
CAediting_27083	chr1_24532352_+	intronic
CAediting_27084	chr1_24532366_+	intronic
CAediting_27085	chr1_24532368_+	intronic
CAediting_27086	chr1_24532379_+	intronic
CAediting_27087	chr1_24532384_+	intronic
CAediting_27088	chr1_24532410_+	intronic
CAediting_27089	chr1_24532416_+	intronic
CAediting_27090	chr1_24532427_+	intronic
CAediting_27091	chr1_24532436_+	intronic
CAediting_27092	chr1_24532447_+	intronic
CAediting_27093	chr1_24532501_+	intronic
CAediting_27094	chr1_24532666_+	intronic
CAediting_27095	chr1_24532685_+	intronic
CAediting_27096	chr1_24532693_+	intronic
CAediting_27097	chr1_24532694_+	intronic
CAediting_27098	chr1_24532733_+	intronic
CAediting_27099	chr1_24532746_+	intronic
CAediting_27100	chr1_24532761_+	intronic
CAediting_27101	chr1_24532763_+	intronic
CAediting_27102	chr1_24532770_+	intronic
CAediting_27103	chr1_24532771_+	intronic
CAediting_27104	chr1_24532785_+	intronic
CAediting_27105	chr1_24532802_+	intronic
CAediting_27106	chr1_24532805_+	intronic
CAediting_27107	chr1_24532819_+	intronic
CAediting_27108	chr1_24532825_+	intronic
CAediting_27109	chr1_24532831_+	intronic
CAediting_27110	chr1_24532837_+	intronic
CAediting_27111	chr1_24532841_+	intronic
CAediting_27112	chr1_24532858_+	intronic
CAediting_27113	chr1_24532870_+	intronic
CAediting_27114	chr1_24532890_+	intronic
CAediting_27115	chr1_24532894_+	intronic
CAediting_27116	chr1_24532933_+	intronic
CAediting_27117	chr1_24537621_+	UTR3
CAediting_27118	chr1_24537635_+	UTR3
CAediting_27119	chr1_24537637_+	UTR3
CAediting_27120	chr1_24537642_+	UTR3
CAediting_27121	chr1_24537643_+	UTR3
CAediting_27122	chr1_24537648_+	UTR3
CAediting_27123	chr1_24537651_+	UTR3
CAediting_27124	chr1_24537689_+	UTR3
CAediting_27125	chr1_24537692_+	UTR3
CAediting_27126	chr1_24537697_+	UTR3
CAediting_27127	chr1_24537698_+	UTR3
CAediting_27128	chr1_24537709_+	UTR3
CAediting_27129	chr1_24537712_+	UTR3
CAediting_27130	chr1_24537713_+	UTR3
CAediting_27131	chr1_24537715_+	UTR3
CAediting_27132	chr1_24537721_+	UTR3
CAediting_27133	chr1_24537723_+	UTR3
CAediting_27134	chr1_24537738_+	UTR3
CAediting_27135	chr1_24537739_+	UTR3
CAediting_27136	chr1_24537741_+	UTR3
CAediting_27137	chr1_24537742_+	UTR3
CAediting_27138	chr1_24537748_+	UTR3
CAediting_27139	chr1_24537753_+	UTR3
CAediting_27140	chr1_24537769_+	UTR3
CAediting_27141	chr1_24537771_+	UTR3
CAediting_27142	chr1_24537779_+	UTR3
CAediting_27143	chr1_24537780_+	UTR3
CAediting_27144	chr1_24537785_+	UTR3
CAediting_27145	chr1_24537789_+	UTR3
CAediting_27146	chr1_24537796_+	UTR3
CAediting_27147	chr1_24537802_+	UTR3
CAediting_27148	chr1_24537806_+	UTR3
CAediting_27149	chr1_24537809_+	UTR3
CAediting_27150	chr1_24537812_+	UTR3
CAediting_27151	chr1_24537821_+	UTR3
CAediting_27152	chr1_24537827_+	UTR3
CAediting_27153	chr1_24537829_+	UTR3
CAediting_27154	chr1_24537849_+	UTR3
CAediting_27155	chr1_24537854_+	UTR3
CAediting_27156	chr1_24537864_+	UTR3
CAediting_27157	chr1_24537869_+	UTR3
CAediting_27158	chr1_24537878_+	UTR3
CAediting_27159	chr1_24537879_+	UTR3
CAediting_27160	chr1_24537888_+	UTR3
CAediting_27161	chr1_24538424_+	UTR3
CAediting_27162	chr1_24538426_+	UTR3
CAediting_27163	chr1_24538430_+	UTR3
CAediting_27164	chr1_24538460_+	UTR3
CAediting_27165	chr1_24538469_+	UTR3
CAediting_27166	chr1_24538479_+	UTR3
CAediting_27167	chr1_24538509_+	UTR3
CAediting_27168	chr1_24538522_+	UTR3
CAediting_27169	chr1_24538531_+	UTR3
CAediting_27170	chr1_24538544_+	UTR3
CAediting_27171	chr1_24538546_+	UTR3
CAediting_27172	chr1_24538594_+	UTR3
CAediting_27173	chr1_24538595_+	UTR3
CAediting_27174	chr1_24538598_+	UTR3
CAediting_27175	chr1_24538612_+	UTR3
CAediting_27176	chr1_24538615_+	UTR3
CAediting_27177	chr1_24538624_+	UTR3
CAediting_27178	chr1_24538627_+	UTR3
CAediting_27179	chr1_24538636_+	UTR3
CAediting_27180	chr1_24538648_+	UTR3
CAediting_27181	chr1_24538652_+	UTR3
CAediting_27182	chr1_24538673_+	UTR3
CAediting_27183	chr1_24538674_+	UTR3
CAediting_27184	chr1_24538675_+	UTR3
CAediting_27185	chr1_24538698_+	UTR3
CAediting_27186	chr1_24538702_+	UTR3

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_27051	chr1_24508965_+	SINE	Alu	AluJb
CAediting_27052	chr1_24516049_+	SINE	Alu	AluSg
CAediting_27053	chr1_24516075_+	SINE	Alu	AluSg
CAediting_27054	chr1_24518891_+	SINE	Alu	AluSx1
CAediting_27055	chr1_24518907_+	SINE	Alu	AluSx1
CAediting_27056	chr1_24526231_+	SINE	Alu	AluJr
CAediting_27057	chr1_24526336_+	SINE	Alu	AluJr
CAediting_27058	chr1_24527087_+	SINE	Alu	AluSx3
CAediting_27059	chr1_24529328_+	SINE	Alu	AluJo
CAediting_27060	chr1_24529371_+	SINE	Alu	AluJo
CAediting_27061	chr1_24529419_+	SINE	Alu	AluJo
CAediting_27062	chr1_24529442_+	SINE	Alu	AluJo
CAediting_27063	chr1_24529644_+	SINE	Alu	AluSx1
CAediting_27064	chr1_24529690_+	SINE	Alu	AluSx1
CAediting_27065	chr1_24530091_+	SINE	Alu	AluJb
CAediting_27066	chr1_24530175_+	SINE	Alu	AluJb
CAediting_27067	chr1_24530176_+	SINE	Alu	AluJb
CAediting_27068	chr1_24530177_+	SINE	Alu	AluJb
CAediting_27069	chr1_24530224_+	SINE	Alu	AluJb
CAediting_27070	chr1_24530232_+	SINE	Alu	AluJb
CAediting_27071	chr1_24530248_+	SINE	Alu	AluJb
CAediting_27072	chr1_24530249_+	SINE	Alu	AluJb
CAediting_27073	chr1_24530252_+	SINE	Alu	AluJb
CAediting_27074	chr1_24530275_+	SINE	Alu	AluJb
CAediting_27075	chr1_24530276_+	SINE	Alu	AluJb
CAediting_27076	chr1_24530281_+	SINE	Alu	AluJb
CAediting_27077	chr1_24530305_+	SINE	Alu	AluJb
CAediting_27078	chr1_24532266_+	SINE	Alu	AluSx
CAediting_27079	chr1_24532286_+	SINE	Alu	AluSx
CAediting_27080	chr1_24532296_+	SINE	Alu	AluSx
CAediting_27081	chr1_24532304_+	SINE	Alu	AluSx
CAediting_27082	chr1_24532320_+	SINE	Alu	AluSx
CAediting_27083	chr1_24532352_+	SINE	Alu	AluSx
CAediting_27084	chr1_24532366_+	SINE	Alu	AluSx
CAediting_27085	chr1_24532368_+	SINE	Alu	AluSx
CAediting_27086	chr1_24532379_+	SINE	Alu	AluSx
CAediting_27087	chr1_24532384_+	SINE	Alu	AluSx
CAediting_27088	chr1_24532410_+	SINE	Alu	AluSx
CAediting_27089	chr1_24532416_+	SINE	Alu	AluSx
CAediting_27090	chr1_24532427_+	SINE	Alu	AluSx
CAediting_27091	chr1_24532436_+	SINE	Alu	AluSx
CAediting_27092	chr1_24532447_+	SINE	Alu	AluSx
CAediting_27093	chr1_24532501_+	SINE	Alu	AluSx
CAediting_27095	chr1_24532685_+	SINE	Alu	AluY
CAediting_27096	chr1_24532693_+	SINE	Alu	AluY
CAediting_27097	chr1_24532694_+	SINE	Alu	AluY
CAediting_27098	chr1_24532733_+	SINE	Alu	AluY
CAediting_27099	chr1_24532746_+	SINE	Alu	AluY
CAediting_27100	chr1_24532761_+	SINE	Alu	AluY
CAediting_27101	chr1_24532763_+	SINE	Alu	AluY
CAediting_27102	chr1_24532770_+	SINE	Alu	AluY
CAediting_27103	chr1_24532771_+	SINE	Alu	AluY
CAediting_27104	chr1_24532785_+	SINE	Alu	AluY
CAediting_27105	chr1_24532802_+	SINE	Alu	AluY
CAediting_27106	chr1_24532805_+	SINE	Alu	AluY
CAediting_27107	chr1_24532819_+	SINE	Alu	AluY
CAediting_27108	chr1_24532825_+	SINE	Alu	AluY
CAediting_27109	chr1_24532831_+	SINE	Alu	AluY
CAediting_27110	chr1_24532837_+	SINE	Alu	AluY
CAediting_27111	chr1_24532841_+	SINE	Alu	AluY
CAediting_27112	chr1_24532858_+	SINE	Alu	AluY
CAediting_27113	chr1_24532870_+	SINE	Alu	AluY
CAediting_27114	chr1_24532890_+	SINE	Alu	AluY
CAediting_27115	chr1_24532894_+	SINE	Alu	AluY
CAediting_27116	chr1_24532933_+	SINE	Alu	AluY
CAediting_27117	chr1_24537621_+	SINE	Alu	AluSp
CAediting_27118	chr1_24537635_+	SINE	Alu	AluSp
CAediting_27119	chr1_24537637_+	SINE	Alu	AluSp
CAediting_27120	chr1_24537642_+	SINE	Alu	AluSp
CAediting_27121	chr1_24537643_+	SINE	Alu	AluSp
CAediting_27122	chr1_24537648_+	SINE	Alu	AluSp
CAediting_27123	chr1_24537651_+	SINE	Alu	AluSp
CAediting_27124	chr1_24537689_+	SINE	Alu	AluSp
CAediting_27125	chr1_24537692_+	SINE	Alu	AluSp
CAediting_27126	chr1_24537697_+	SINE	Alu	AluSp
CAediting_27127	chr1_24537698_+	SINE	Alu	AluSp
CAediting_27128	chr1_24537709_+	SINE	Alu	AluSp
CAediting_27129	chr1_24537712_+	SINE	Alu	AluSp
CAediting_27130	chr1_24537713_+	SINE	Alu	AluSp
CAediting_27131	chr1_24537715_+	SINE	Alu	AluSp
CAediting_27132	chr1_24537721_+	SINE	Alu	AluSp
CAediting_27133	chr1_24537723_+	SINE	Alu	AluSp
CAediting_27134	chr1_24537738_+	SINE	Alu	AluSp
CAediting_27135	chr1_24537739_+	SINE	Alu	AluSp
CAediting_27136	chr1_24537741_+	SINE	Alu	AluSp
CAediting_27137	chr1_24537742_+	SINE	Alu	AluSp
CAediting_27138	chr1_24537748_+	SINE	Alu	AluSp
CAediting_27139	chr1_24537753_+	SINE	Alu	AluSp
CAediting_27140	chr1_24537769_+	SINE	Alu	AluSp
CAediting_27141	chr1_24537771_+	SINE	Alu	AluSp
CAediting_27142	chr1_24537779_+	SINE	Alu	AluSp
CAediting_27143	chr1_24537780_+	SINE	Alu	AluSp
CAediting_27144	chr1_24537785_+	SINE	Alu	AluSp
CAediting_27145	chr1_24537789_+	SINE	Alu	AluSp
CAediting_27146	chr1_24537796_+	SINE	Alu	AluSp
CAediting_27147	chr1_24537802_+	SINE	Alu	AluSp
CAediting_27148	chr1_24537806_+	SINE	Alu	AluSp
CAediting_27149	chr1_24537809_+	SINE	Alu	AluSp
CAediting_27150	chr1_24537812_+	SINE	Alu	AluSp
CAediting_27151	chr1_24537821_+	SINE	Alu	AluSp
CAediting_27152	chr1_24537827_+	SINE	Alu	AluSp
CAediting_27153	chr1_24537829_+	SINE	Alu	AluSp
CAediting_27154	chr1_24537849_+	SINE	Alu	AluSp
CAediting_27155	chr1_24537854_+	SINE	Alu	AluSp
CAediting_27156	chr1_24537864_+	SINE	Alu	AluSp
CAediting_27157	chr1_24537869_+	SINE	Alu	AluSp
CAediting_27158	chr1_24537878_+	SINE	Alu	AluSp
CAediting_27159	chr1_24537879_+	SINE	Alu	AluSp
CAediting_27160	chr1_24537888_+	SINE	Alu	AluSp
CAediting_27161	chr1_24538424_+	SINE	Alu	AluY
CAediting_27162	chr1_24538426_+	SINE	Alu	AluY
CAediting_27163	chr1_24538430_+	SINE	Alu	AluY
CAediting_27164	chr1_24538460_+	SINE	Alu	AluY
CAediting_27165	chr1_24538469_+	SINE	Alu	AluY
CAediting_27166	chr1_24538479_+	SINE	Alu	AluY
CAediting_27167	chr1_24538509_+	SINE	Alu	AluY
CAediting_27168	chr1_24538522_+	SINE	Alu	AluY
CAediting_27169	chr1_24538531_+	SINE	Alu	AluY
CAediting_27170	chr1_24538544_+	SINE	Alu	AluY
CAediting_27171	chr1_24538546_+	SINE	Alu	AluY
CAediting_27172	chr1_24538594_+	SINE	Alu	AluY
CAediting_27173	chr1_24538595_+	SINE	Alu	AluY
CAediting_27174	chr1_24538598_+	SINE	Alu	AluY
CAediting_27175	chr1_24538612_+	SINE	Alu	AluY
CAediting_27176	chr1_24538615_+	SINE	Alu	AluY
CAediting_27177	chr1_24538624_+	SINE	Alu	AluY
CAediting_27178	chr1_24538627_+	SINE	Alu	AluY
CAediting_27179	chr1_24538636_+	SINE	Alu	AluY
CAediting_27180	chr1_24538648_+	SINE	Alu	AluY
CAediting_27181	chr1_24538652_+	SINE	Alu	AluY
CAediting_27182	chr1_24538673_+	SINE	Alu	AluY
CAediting_27183	chr1_24538674_+	SINE	Alu	AluY
CAediting_27184	chr1_24538675_+	SINE	Alu	AluY
CAediting_27185	chr1_24538698_+	SINE	Alu	AluY
CAediting_27186	chr1_24538702_+	SINE	Alu	AluY

Top

RNA A-to-I editing events in the alternative splicing sites for RCAN3

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000117602.10.RCAN3.

Correlation between RNA A-to-I editing and PSI for ENSG00000117602.10.RCAN3.

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for RCAN3

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

BRCA.CAediting_27129.ENSG00000117602.RCAN3.png
Soverview

Top

Protein coding region RNA A-to-I editings for RCAN3

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

Top

The effects of the RNA editing to the miRNA binding sites for RCAN3

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_27119	chr1_24537637_+	ENSG00000117602.10	ENST00000374395	hsa-miR-8074	24537635	24537642	8mer-1a	24537618	24537642	155.00	-16.04
CAediting_27120	chr1_24537642_+	ENSG00000117602.10	ENST00000374395	hsa-miR-2681-3p	24537637	24537643	7mer-m8	24537623	24537644	153.00	-14.80
CAediting_27120	chr1_24537642_+	ENSG00000117602.10	ENST00000374395	hsa-miR-638	24537641	24537647	7mer-1a	24537622	24537647	142.00	-26.80
CAediting_27121	chr1_24537643_+	ENSG00000117602.10	ENST00000374395	hsa-miR-10525-3p	24537638	24537644	7mer-m8	24537625	24537645	161.00	-19.01
CAediting_27122	chr1_24537648_+	ENSG00000117602.10	ENST00000374395	hsa-miR-371a-3p	24537646	24537652	7mer-m8	24537632	24537653	151.00	-18.22
CAediting_27127	chr1_24537698_+	ENSG00000117602.10	ENST00000374395	hsa-miR-12113	24537691	24537697	7mer-m8	24537678	24537698	147.00	-19.86
CAediting_27127	chr1_24537698_+	ENSG00000117602.10	ENST00000374395	hsa-miR-4539	24537691	24537697	7mer-m8	24537674	24537698	155.00	-22.01
CAediting_27128	chr1_24537709_+	ENSG00000117602.10	ENST00000374395	hsa-miR-4435	24537705	24537712	8mer-1a	24537692	24537712	146.00	-17.76
CAediting_27128	chr1_24537709_+	ENSG00000117602.10	ENST00000374395	hsa-miR-4435	24537705	24537712	8mer-1a	24537692	24537712	146.00	-17.76
CAediting_27128	chr1_24537709_+	ENSG00000117602.10	ENST00000374395	hsa-miR-4755-3p	24537703	24537709	7mer-m8	24537689	24537710	145.00	-16.93
CAediting_27139	chr1_24537753_+	ENSG00000117602.10	ENST00000374395	hsa-miR-1972	24537751	24537757	7mer-m8	24537737	24537758	141.00	-18.10
CAediting_27139	chr1_24537753_+	ENSG00000117602.10	ENST00000374395	hsa-miR-1972	24537751	24537757	7mer-m8	24537737	24537758	141.00	-18.10
CAediting_27142	chr1_24537779_+	ENSG00000117602.10	ENST00000374395	hsa-miR-513a-5p	24537773	24537779	7mer-m8	24537763	24537780	160.00	-21.48
CAediting_27142	chr1_24537779_+	ENSG00000117602.10	ENST00000374395	hsa-miR-513a-5p	24537773	24537779	7mer-m8	24537763	24537780	160.00	-21.48
CAediting_27142	chr1_24537779_+	ENSG00000117602.10	ENST00000374395	hsa-miR-638	24537778	24537784	7mer-1a	24537760	24537784	163.00	-35.62
CAediting_27143	chr1_24537780_+	ENSG00000117602.10	ENST00000374395	hsa-miR-8052	24537778	24537784	7mer-1a	24537766	24537784	143.00	-23.77
CAediting_27145	chr1_24537789_+	ENSG00000117602.10	ENST00000374395	hsa-miR-1207-3p	24537782	24537788	7mer-m8	24537772	24537789	140.00	-12.56
CAediting_27145	chr1_24537789_+	ENSG00000117602.10	ENST00000374395	hsa-miR-646	24537784	24537790	7mer-m8	24537773	24537791	145.00	-16.24
CAediting_27153	chr1_24537829_+	ENSG00000117602.10	ENST00000374395	hsa-miR-1281	24537824	24537830	7mer-m8	24537815	24537831	141.00	-16.88
CAediting_27153	chr1_24537829_+	ENSG00000117602.10	ENST00000374395	hsa-miR-6778-3p	24537823	24537829	7mer-m8	24537810	24537830	142.00	-17.20
CAediting_27155	chr1_24537854_+	ENSG00000117602.10	ENST00000374395	hsa-miR-4634	24537851	24537858	8mer-1a	24537838	24537858	150.00	-25.52
CAediting_27158	chr1_24537878_+	ENSG00000117602.10	ENST00000374395	hsa-miR-3655	24537876	24537883	8mer-1a	24537863	24537883	159.00	-24.02
CAediting_27161	chr1_24538424_+	ENSG00000117602.10	ENST00000374395	hsa-miR-4433b-5p	24538421	24538427	7mer-m8	24538408	24538428	140.00	-10.81
CAediting_27162	chr1_24538426_+	ENSG00000117602.10	ENST00000374395	hsa-miR-5001-3p	24538423	24538429	7mer-m8	24538409	24538430	146.00	-15.94
CAediting_27163	chr1_24538430_+	ENSG00000117602.10	ENST00000374395	hsa-miR-10a-5p	24538425	24538431	7mer-m8	24538412	24538432	147.00	-15.45
CAediting_27163	chr1_24538430_+	ENSG00000117602.10	ENST00000374395	hsa-miR-10b-5p	24538425	24538431	7mer-m8	24538408	24538432	145.00	-13.30
CAediting_27163	chr1_24538430_+	ENSG00000117602.10	ENST00000374395	hsa-miR-339-5p	24538424	24538430	7mer-m8	24538409	24538431	146.00	-16.43
CAediting_27163	chr1_24538430_+	ENSG00000117602.10	ENST00000374395	hsa-miR-4421	24538423	24538429	7mer-m8	24538410	24538430	148.00	-12.07
CAediting_27163	chr1_24538430_+	ENSG00000117602.10	ENST00000374395	hsa-miR-4725-5p	24538426	24538432	7mer-m8	24538413	24538433	140.00	-15.96
CAediting_27163	chr1_24538430_+	ENSG00000117602.10	ENST00000374395	hsa-miR-504-5p	24538426	24538432	7mer-m8	24538414	24538433	148.00	-18.15
CAediting_27163	chr1_24538430_+	ENSG00000117602.10	ENST00000374395	hsa-miR-5699-3p	24538423	24538429	7mer-m8	24538409	24538430	141.00	-16.39
CAediting_27164	chr1_24538460_+	ENSG00000117602.10	ENST00000374395	hsa-miR-1199-3p	24538458	24538464	7mer-m8	24538445	24538465	160.00	-33.83
CAediting_27164	chr1_24538460_+	ENSG00000117602.10	ENST00000374395	hsa-miR-1908-3p	24538457	24538463	7mer-m8	24538446	24538464	160.00	-29.99
CAediting_27164	chr1_24538460_+	ENSG00000117602.10	ENST00000374395	hsa-miR-6869-3p	24538455	24538461	7mer-m8	24538444	24538462	146.00	-22.43
CAediting_27165	chr1_24538469_+	ENSG00000117602.10	ENST00000374395	hsa-miR-4786-5p	24538466	24538472	7mer-m8	24538454	24538473	152.00	-22.57
CAediting_27169	chr1_24538531_+	ENSG00000117602.10	ENST00000374395	hsa-miR-6852-5p	24538526	24538531	6mer	24538513	24538532	149.00	-26.62
CAediting_27170	chr1_24538544_+	ENSG00000117602.10	ENST00000374395	hsa-miR-17-3p	24538540	24538546	7mer-m8	24538525	24538547	158.00	-20.42
CAediting_27174	chr1_24538598_+	ENSG00000117602.10	ENST00000374395	hsa-miR-4436b-5p	24538593	24538599	7mer-m8	24538579	24538600	143.00	-8.89
CAediting_27174	chr1_24538598_+	ENSG00000117602.10	ENST00000374395	hsa-miR-4436b-5p	24538593	24538599	7mer-m8	24538579	24538600	143.00	-8.89
CAediting_27182	chr1_24538673_+	ENSG00000117602.10	ENST00000374395	hsa-miR-6771-5p	24538667	24538674	8mer-1a	24538655	24538674	161.00	-32.19
CAediting_27183	chr1_24538674_+	ENSG00000117602.10	ENST00000374395	hsa-miR-326	24538669	24538675	7mer-m8	24538657	24538676	140.00	-15.33
CAediting_27183	chr1_24538674_+	ENSG00000117602.10	ENST00000374395	hsa-miR-330-5p	24538669	24538675	7mer-m8	24538655	24538676	140.00	-22.45
CAediting_27183	chr1_24538674_+	ENSG00000117602.10	ENST00000374395	hsa-miR-4314	24538668	24538674	7mer-m8	24538658	24538675	140.00	-18.79
CAediting_27183	chr1_24538674_+	ENSG00000117602.10	ENST00000374395	hsa-miR-514a-5p	24538670	24538676	7mer-m8	24538657	24538677	154.00	-19.31
CAediting_27183	chr1_24538674_+	ENSG00000117602.10	ENST00000374395	hsa-miR-514a-5p	24538670	24538676	7mer-m8	24538657	24538677	154.00	-19.31
CAediting_27183	chr1_24538674_+	ENSG00000117602.10	ENST00000374395	hsa-miR-514a-5p	24538670	24538676	7mer-m8	24538657	24538677	154.00	-19.31
CAediting_27185	chr1_24538698_+	ENSG00000117602.10	ENST00000374395	hsa-miR-662	24538693	24538698	6mer	24538675	24538699	140.00	-30.51
CAediting_27185	chr1_24538698_+	ENSG00000117602.10	ENST00000374395	hsa-miR-663b	24538696	24538702	7mer-m8	24538682	24538703	153.00	-27.97
CAediting_27118	chr1_24537635_+	ENSG00000117602.10	ENST00000374395	hsa-miR-4466	24537633	24537639	7mer-1a	24537622	24537639	143.00	-28.26
CAediting_27123	chr1_24537651_+	ENSG00000117602.10	ENST00000374395	hsa-miR-518a-3p	24537648	24537654	7mer-m8	24537633	24537655	151.00	-14.81
CAediting_27123	chr1_24537651_+	ENSG00000117602.10	ENST00000374395	hsa-miR-518a-3p	24537648	24537654	7mer-m8	24537633	24537655	151.00	-14.81
CAediting_27123	chr1_24537651_+	ENSG00000117602.10	ENST00000374395	hsa-miR-518b	24537648	24537654	7mer-m8	24537634	24537655	145.00	-17.19
CAediting_27123	chr1_24537651_+	ENSG00000117602.10	ENST00000374395	hsa-miR-518c-3p	24537648	24537654	7mer-m8	24537632	24537655	148.00	-19.99
CAediting_27123	chr1_24537651_+	ENSG00000117602.10	ENST00000374395	hsa-miR-518d-3p	24537648	24537654	7mer-m8	24537634	24537655	149.00	-18.74
CAediting_27123	chr1_24537651_+	ENSG00000117602.10	ENST00000374395	hsa-miR-518e-3p	24537647	24537653	7mer-m8	24537634	24537654	140.00	-13.59
CAediting_27123	chr1_24537651_+	ENSG00000117602.10	ENST00000374395	hsa-miR-518f-3p	24537648	24537654	7mer-m8	24537635	24537655	145.00	-13.71
CAediting_27123	chr1_24537651_+	ENSG00000117602.10	ENST00000374395	hsa-miR-526a-3p	24537648	24537654	7mer-m8	24537634	24537655	145.00	-12.71
CAediting_27125	chr1_24537692_+	ENSG00000117602.10	ENST00000374395	hsa-miR-4732-3p	24537685	24537691	7mer-m8	24537672	24537692	150.00	-19.85
CAediting_27134	chr1_24537738_+	ENSG00000117602.10	ENST00000374395	hsa-miR-1297	24537732	24537739	8mer-1a	24537722	24537739	150.00	-15.58
CAediting_27134	chr1_24537738_+	ENSG00000117602.10	ENST00000374395	hsa-miR-26a-5p	24537732	24537739	8mer-1a	24537717	24537739	160.00	-17.93
CAediting_27134	chr1_24537738_+	ENSG00000117602.10	ENST00000374395	hsa-miR-26a-5p	24537732	24537739	8mer-1a	24537717	24537739	160.00	-17.93
CAediting_27134	chr1_24537738_+	ENSG00000117602.10	ENST00000374395	hsa-miR-26b-5p	24537732	24537739	8mer-1a	24537718	24537739	160.00	-18.65
CAediting_27134	chr1_24537738_+	ENSG00000117602.10	ENST00000374395	hsa-miR-4465	24537732	24537739	8mer-1a	24537721	24537739	151.00	-20.04
CAediting_27134	chr1_24537738_+	ENSG00000117602.10	ENST00000374395	hsa-miR-5697	24537731	24537738	8mer-1a	24537717	24537738	153.00	-15.16
CAediting_27136	chr1_24537741_+	ENSG00000117602.10	ENST00000374395	hsa-miR-630	24537739	24537746	8mer-1a	24537723	24537746	154.00	-16.42
CAediting_27138	chr1_24537748_+	ENSG00000117602.10	ENST00000374395	hsa-miR-4742-3p	24537741	24537748	8mer-1a	24537726	24537748	142.00	-9.18
CAediting_27138	chr1_24537748_+	ENSG00000117602.10	ENST00000374395	hsa-miR-4778-5p	24537744	24537750	7mer-m8	24537728	24537751	147.00	-17.34
CAediting_27140	chr1_24537769_+	ENSG00000117602.10	ENST00000374395	hsa-miR-4787-3p	24537765	24537771	7mer-m8	24537751	24537772	162.00	-27.52
CAediting_27141	chr1_24537771_+	ENSG00000117602.10	ENST00000374395	hsa-miR-3622a-5p	24537769	24537775	7mer-m8	24537755	24537776	147.00	-22.26
CAediting_27141	chr1_24537771_+	ENSG00000117602.10	ENST00000374395	hsa-miR-6767-3p	24537766	24537772	7mer-m8	24537752	24537773	151.00	-16.89
CAediting_27146	chr1_24537796_+	ENSG00000117602.10	ENST00000374395	hsa-miR-3943	24537793	24537799	7mer-m8	24537780	24537800	146.00	-22.28
CAediting_27149	chr1_24537809_+	ENSG00000117602.10	ENST00000374395	hsa-miR-6752-3p	24537802	24537808	7mer-m8	24537790	24537809	157.00	-30.29
CAediting_27149	chr1_24537809_+	ENSG00000117602.10	ENST00000374395	hsa-miR-6801-3p	24537803	24537810	8mer-1a	24537791	24537810	148.00	-22.90
CAediting_27149	chr1_24537809_+	ENSG00000117602.10	ENST00000374395	hsa-miR-6810-3p	24537803	24537810	8mer-1a	24537788	24537810	151.00	-28.60
CAediting_27151	chr1_24537821_+	ENSG00000117602.10	ENST00000374395	hsa-miR-24-3p	24537816	24537822	7mer-m8	24537802	24537823	140.00	-18.23
CAediting_27151	chr1_24537821_+	ENSG00000117602.10	ENST00000374395	hsa-miR-24-3p	24537816	24537822	7mer-m8	24537802	24537823	140.00	-18.23
CAediting_27151	chr1_24537821_+	ENSG00000117602.10	ENST00000374395	hsa-miR-3664-3p	24537814	24537820	7mer-m8	24537800	24537821	141.00	-13.08
CAediting_27151	chr1_24537821_+	ENSG00000117602.10	ENST00000374395	hsa-miR-3934-3p	24537815	24537821	7mer-m8	24537801	24537822	143.00	-15.97
CAediting_27152	chr1_24537827_+	ENSG00000117602.10	ENST00000374395	hsa-miR-6840-5p	24537821	24537828	8mer-1a	24537805	24537828	144.00	-22.69
CAediting_27160	chr1_24537888_+	ENSG00000117602.10	ENST00000374395	hsa-miR-572	24537882	24537889	8mer-1a	24537872	24537889	143.00	-19.62
CAediting_27178	chr1_24538627_+	ENSG00000117602.10	ENST00000374395	hsa-miR-3620-3p	24538622	24538628	7mer-m8	24538608	24538629	143.00	-17.39
CAediting_27179	chr1_24538636_+	ENSG00000117602.10	ENST00000374395	hsa-miR-4523	24538630	24538636	7mer-m8	24538617	24538637	155.00	-27.75
CAediting_27184	chr1_24538675_+	ENSG00000117602.10	ENST00000374395	hsa-miR-3189-3p	24538669	24538675	7mer-m8	24538657	24538676	141.00	-22.40
CAediting_27184	chr1_24538675_+	ENSG00000117602.10	ENST00000374395	hsa-miR-6813-3p	24538670	24538676	7mer-m8	24538657	24538677	140.00	-12.88
CAediting_27133	chr1_24537723_+	ENSG00000117602.10	ENST00000374395	hsa-miR-412-3p	24537716	24537722	7mer-m8	24537701	24537723	145.00	-18.48
CAediting_27133	chr1_24537723_+	ENSG00000117602.10	ENST00000374395	hsa-miR-6754-3p	24537716	24537722	7mer-m8	24537699	24537723	146.00	-16.80
CAediting_27133	chr1_24537723_+	ENSG00000117602.10	ENST00000374395	hsa-miR-8083	24537720	24537726	7mer-m8	24537707	24537727	147.00	-18.35
CAediting_27135	chr1_24537739_+	ENSG00000117602.10	ENST00000374395	hsa-miR-4263	24537734	24537741	8mer-1a	24537724	24537741	146.00	-11.03
CAediting_27147	chr1_24537802_+	ENSG00000117602.10	ENST00000374395	hsa-miR-1913	24537800	24537806	7mer-m8	24537786	24537807	147.00	-22.10
CAediting_27147	chr1_24537802_+	ENSG00000117602.10	ENST00000374395	hsa-miR-6849-3p	24537795	24537801	7mer-m8	24537781	24537802	140.00	-18.03
CAediting_27157	chr1_24537869_+	ENSG00000117602.10	ENST00000374395	hsa-miR-4743-5p	24537865	24537871	7mer-m8	24537849	24537872	148.00	-21.41
CAediting_27180	chr1_24538648_+	ENSG00000117602.10	ENST00000374395	hsa-miR-4733-3p	24538644	24538651	8mer-1a	24538629	24538651	159.00	-26.61

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_27142	chr1_24537779_+	ENSG00000117602.10	ENST00000374395	hsa-miR-10399-5p	24537774	24537780	7mer-m8	24537760	24537781	152	-11.75
CAediting_27143	chr1_24537780_+	ENSG00000117602.10	ENST00000374395	hsa-miR-10399-5p	24537774	24537780	7mer-m8	24537760	24537781	152	-11.75
CAediting_27123	chr1_24537651_+	ENSG00000117602.10	ENST00000374395	hsa-miR-106a-5p	24537648	24537654	7mer-m8	24537634	24537655	147	-11.41
CAediting_27123	chr1_24537651_+	ENSG00000117602.10	ENST00000374395	hsa-miR-106b-5p	24537648	24537654	7mer-m8	24537635	24537655	152	-14.36
CAediting_27169	chr1_24538531_+	ENSG00000117602.10	ENST00000374395	hsa-miR-12126	24538526	24538533	8mer-1a	24538510	24538533	147	-13.23
CAediting_27156	chr1_24537864_+	ENSG00000117602.10	ENST00000374395	hsa-miR-122-5p	24537862	24537868	7mer-1a	24537850	24537868	143	-25.6
CAediting_27140	chr1_24537769_+	ENSG00000117602.10	ENST00000374395	hsa-miR-1227-3p	24537763	24537770	8mer-1a	24537751	24537770	147	-19.22
CAediting_27146	chr1_24537796_+	ENSG00000117602.10	ENST00000374395	hsa-miR-150-5p	24537790	24537796	7mer-m8	24537776	24537797	140	-13.49
CAediting_27123	chr1_24537651_+	ENSG00000117602.10	ENST00000374395	hsa-miR-17-5p	24537648	24537654	7mer-m8	24537634	24537655	147	-15.65
CAediting_27164	chr1_24538460_+	ENSG00000117602.10	ENST00000374395	hsa-miR-191-3p	24538454	24538460	7mer-m8	24538440	24538461	147	-19.45
CAediting_27148	chr1_24537806_+	ENSG00000117602.10	ENST00000374395	hsa-miR-1976	24537803	24537810	8mer-1a	24537790	24537810	149	-21.37
CAediting_27149	chr1_24537809_+	ENSG00000117602.10	ENST00000374395	hsa-miR-1976	24537803	24537810	8mer-1a	24537790	24537810	149	-21.37
CAediting_27123	chr1_24537651_+	ENSG00000117602.10	ENST00000374395	hsa-miR-20a-5p	24537648	24537654	7mer-m8	24537628	24537655	148	-14.65
CAediting_27123	chr1_24537651_+	ENSG00000117602.10	ENST00000374395	hsa-miR-20b-5p	24537648	24537654	7mer-m8	24537634	24537655	147	-15.65
CAediting_27123	chr1_24537651_+	ENSG00000117602.10	ENST00000374395	hsa-miR-302a-3p	24537647	24537653	7mer-m8	24537634	24537654	150	-17.38
CAediting_27123	chr1_24537651_+	ENSG00000117602.10	ENST00000374395	hsa-miR-302b-3p	24537647	24537653	7mer-m8	24537634	24537654	142	-8.62
CAediting_27123	chr1_24537651_+	ENSG00000117602.10	ENST00000374395	hsa-miR-302c-3p	24537647	24537653	7mer-m8	24537632	24537654	141	-11.96
CAediting_27123	chr1_24537651_+	ENSG00000117602.10	ENST00000374395	hsa-miR-302d-3p	24537647	24537653	7mer-m8	24537632	24537654	149	-14.14
CAediting_27123	chr1_24537651_+	ENSG00000117602.10	ENST00000374395	hsa-miR-302e	24537647	24537653	7mer-m8	24537638	24537654	141	-8.62
CAediting_27177	chr1_24538624_+	ENSG00000117602.10	ENST00000374395	hsa-miR-3064-5p	24538619	24538624	6mer	24538605	24538625	152	-28.06
CAediting_27182	chr1_24538673_+	ENSG00000117602.10	ENST00000374395	hsa-miR-30b-3p	24538666	24538673	8mer-1a	24538652	24538673	147	-17.53
CAediting_27157	chr1_24537869_+	ENSG00000117602.10	ENST00000374395	hsa-miR-3135b	24537864	24537870	7mer-m8	24537849	24537871	155	-29.17
CAediting_27132	chr1_24537721_+	ENSG00000117602.10	ENST00000374395	hsa-miR-3167	24537719	24537725	7mer-m8	24537706	24537726	154	-17.35
CAediting_27133	chr1_24537723_+	ENSG00000117602.10	ENST00000374395	hsa-miR-3167	24537719	24537725	7mer-m8	24537706	24537726	154	-17.35
CAediting_27166	chr1_24538479_+	ENSG00000117602.10	ENST00000374395	hsa-miR-3174	24538475	24538480	6mer	24538461	24538481	142	-21.39
CAediting_27152	chr1_24537827_+	ENSG00000117602.10	ENST00000374395	hsa-miR-340-3p	24537825	24537832	8mer-1a	24537811	24537832	140	-16.96
CAediting_27153	chr1_24537829_+	ENSG00000117602.10	ENST00000374395	hsa-miR-340-3p	24537825	24537832	8mer-1a	24537811	24537832	140	-16.96
CAediting_27172	chr1_24538594_+	ENSG00000117602.10	ENST00000374395	hsa-miR-340-5p	24538588	24538594	7mer-1a	24538573	24538594	140	-4.2
CAediting_27180	chr1_24538648_+	ENSG00000117602.10	ENST00000374395	hsa-miR-34c-3p	24538646	24538652	7mer-m8	24538632	24538653	140	-14.7
CAediting_27181	chr1_24538652_+	ENSG00000117602.10	ENST00000374395	hsa-miR-34c-3p	24538646	24538652	7mer-m8	24538632	24538653	140	-14.7
CAediting_27163	chr1_24538430_+	ENSG00000117602.10	ENST00000374395	hsa-miR-3664-5p	24538425	24538431	7mer-m8	24538411	24538432	153	-17.67
CAediting_27182	chr1_24538673_+	ENSG00000117602.10	ENST00000374395	hsa-miR-3689a-3p	24538666	24538673	8mer-1a	24538652	24538673	141	-19.06
CAediting_27182	chr1_24538673_+	ENSG00000117602.10	ENST00000374395	hsa-miR-3689b-3p	24538666	24538673	8mer-1a	24538652	24538673	141	-19.11
CAediting_27182	chr1_24538673_+	ENSG00000117602.10	ENST00000374395	hsa-miR-3689c	24538666	24538673	8mer-1a	24538652	24538673	141	-19.11
CAediting_27161	chr1_24538424_+	ENSG00000117602.10	ENST00000374395	hsa-miR-371b-5p	24538418	24538425	8mer-1a	24538404	24538425	142	-7.01
CAediting_27161	chr1_24538424_+	ENSG00000117602.10	ENST00000374395	hsa-miR-373-5p	24538418	24538425	8mer-1a	24538404	24538425	148	-11.13
CAediting_27185	chr1_24538698_+	ENSG00000117602.10	ENST00000374395	hsa-miR-4284	24538694	24538701	8mer-1a	24538684	24538701	143	-15.61
CAediting_27168	chr1_24538522_+	ENSG00000117602.10	ENST00000374395	hsa-miR-4478	24538519	24538525	7mer-m8	24538511	24538526	149	-25.05
CAediting_27157	chr1_24537869_+	ENSG00000117602.10	ENST00000374395	hsa-miR-4505	24537866	24537871	6mer	24537855	24537872	140	-23.38
CAediting_27163	chr1_24538430_+	ENSG00000117602.10	ENST00000374395	hsa-miR-4522	24538426	24538432	7mer-m8	24538413	24538433	148	-13.26
CAediting_27140	chr1_24537769_+	ENSG00000117602.10	ENST00000374395	hsa-miR-455-5p	24537765	24537771	7mer-m8	24537751	24537772	145	-14.29
CAediting_27141	chr1_24537771_+	ENSG00000117602.10	ENST00000374395	hsa-miR-455-5p	24537765	24537771	7mer-m8	24537751	24537772	145	-14.29
CAediting_27154	chr1_24537849_+	ENSG00000117602.10	ENST00000374395	hsa-miR-4638-5p	24537843	24537850	8mer-1a	24537829	24537850	144	-20.6
CAediting_27168	chr1_24538522_+	ENSG00000117602.10	ENST00000374395	hsa-miR-4649-3p	24538516	24538522	7mer-m8	24538503	24538523	140	-14.11
CAediting_27125	chr1_24537692_+	ENSG00000117602.10	ENST00000374395	hsa-miR-4680-5p	24537690	24537696	7mer-1a	24537676	24537696	146	-20.04
CAediting_27179	chr1_24538636_+	ENSG00000117602.10	ENST00000374395	hsa-miR-4683	24538634	24538640	7mer-m8	24538620	24538641	151	-18.32
CAediting_27174	chr1_24538598_+	ENSG00000117602.10	ENST00000374395	hsa-miR-4684-5p	24538595	24538601	7mer-m8	24538582	24538602	150	-10.53
CAediting_27140	chr1_24537769_+	ENSG00000117602.10	ENST00000374395	hsa-miR-4715-3p	24537762	24537768	7mer-m8	24537747	24537769	143	-19.17
CAediting_27130	chr1_24537713_+	ENSG00000117602.10	ENST00000374395	hsa-miR-4716-5p	24537711	24537717	7mer-m8	24537697	24537718	140	-9.16
CAediting_27131	chr1_24537715_+	ENSG00000117602.10	ENST00000374395	hsa-miR-4716-5p	24537711	24537717	7mer-m8	24537697	24537718	140	-9.16
CAediting_27139	chr1_24537753_+	ENSG00000117602.10	ENST00000374395	hsa-miR-4735-5p	24537747	24537753	7mer-m8	24537733	24537754	140	-4.47
CAediting_27129	chr1_24537712_+	ENSG00000117602.10	ENST00000374395	hsa-miR-4781-3p	24537709	24537715	7mer-m8	24537693	24537716	142	-11.02
CAediting_27130	chr1_24537713_+	ENSG00000117602.10	ENST00000374395	hsa-miR-4781-3p	24537709	24537715	7mer-m8	24537693	24537716	142	-11.02
CAediting_27131	chr1_24537715_+	ENSG00000117602.10	ENST00000374395	hsa-miR-4781-3p	24537709	24537715	7mer-m8	24537693	24537716	142	-11.02
CAediting_27177	chr1_24538624_+	ENSG00000117602.10	ENST00000374395	hsa-miR-4793-5p	24538622	24538628	7mer-m8	24538606	24538629	146	-18.07
CAediting_27178	chr1_24538627_+	ENSG00000117602.10	ENST00000374395	hsa-miR-4793-5p	24538622	24538628	7mer-m8	24538606	24538629	146	-18.07
CAediting_27177	chr1_24538624_+	ENSG00000117602.10	ENST00000374395	hsa-miR-4794	24538618	24538624	7mer-m8	24538603	24538625	151	-18.08
CAediting_27156	chr1_24537864_+	ENSG00000117602.10	ENST00000374395	hsa-miR-504-3p	24537861	24537868	8mer-1a	24537847	24537868	154	-26.22
CAediting_27121	chr1_24537643_+	ENSG00000117602.10	ENST00000374395	hsa-miR-5089-5p	24537641	24537647	7mer-m8	24537627	24537648	149	-13.79
CAediting_27122	chr1_24537648_+	ENSG00000117602.10	ENST00000374395	hsa-miR-5089-5p	24537641	24537647	7mer-m8	24537627	24537648	149	-13.79
CAediting_27143	chr1_24537780_+	ENSG00000117602.10	ENST00000374395	hsa-miR-5089-5p	24537778	24537784	7mer-m8	24537766	24537785	146	-12.33
CAediting_27144	chr1_24537785_+	ENSG00000117602.10	ENST00000374395	hsa-miR-5089-5p	24537778	24537784	7mer-m8	24537766	24537785	146	-12.33
CAediting_27122	chr1_24537648_+	ENSG00000117602.10	ENST00000374395	hsa-miR-512-3p	24537646	24537652	7mer-m8	24537630	24537653	146	-14.42
CAediting_27123	chr1_24537651_+	ENSG00000117602.10	ENST00000374395	hsa-miR-512-3p	24537646	24537652	7mer-m8	24537630	24537653	146	-14.42
CAediting_27122	chr1_24537648_+	ENSG00000117602.10	ENST00000374395	hsa-miR-512-3p	24537646	24537652	7mer-m8	24537630	24537653	146	-14.42
CAediting_27123	chr1_24537651_+	ENSG00000117602.10	ENST00000374395	hsa-miR-512-3p	24537646	24537652	7mer-m8	24537630	24537653	146	-14.42
CAediting_27123	chr1_24537651_+	ENSG00000117602.10	ENST00000374395	hsa-miR-519d-3p	24537648	24537654	7mer-m8	24537634	24537655	140	-16.02
CAediting_27123	chr1_24537651_+	ENSG00000117602.10	ENST00000374395	hsa-miR-520a-3p	24537647	24537653	7mer-m8	24537632	24537654	144	-13.37
CAediting_27123	chr1_24537651_+	ENSG00000117602.10	ENST00000374395	hsa-miR-520b-3p	24537647	24537653	7mer-m8	24537634	24537654	140	-12.62
CAediting_27123	chr1_24537651_+	ENSG00000117602.10	ENST00000374395	hsa-miR-520c-3p	24537647	24537653	7mer-m8	24537633	24537654	140	-13.04
CAediting_27123	chr1_24537651_+	ENSG00000117602.10	ENST00000374395	hsa-miR-520d-3p	24537647	24537653	7mer-m8	24537632	24537654	154	-17.92
CAediting_27123	chr1_24537651_+	ENSG00000117602.10	ENST00000374395	hsa-miR-520e-3p	24537647	24537653	7mer-m8	24537634	24537654	145	-12.25
CAediting_27123	chr1_24537651_+	ENSG00000117602.10	ENST00000374395	hsa-miR-520g-3p	24537649	24537655	7mer-m8	24537632	24537656	153	-17.78
CAediting_27123	chr1_24537651_+	ENSG00000117602.10	ENST00000374395	hsa-miR-520h	24537649	24537655	7mer-m8	24537635	24537656	150	-13.1
CAediting_27123	chr1_24537651_+	ENSG00000117602.10	ENST00000374395	hsa-miR-526b-3p	24537648	24537654	7mer-m8	24537634	24537655	145	-11.18
CAediting_27149	chr1_24537809_+	ENSG00000117602.10	ENST00000374395	hsa-miR-5571-5p	24537807	24537813	7mer-m8	24537792	24537814	142	-22.45
CAediting_27150	chr1_24537812_+	ENSG00000117602.10	ENST00000374395	hsa-miR-5571-5p	24537807	24537813	7mer-m8	24537792	24537814	142	-22.45
CAediting_27145	chr1_24537789_+	ENSG00000117602.10	ENST00000374395	hsa-miR-562	24537785	24537791	7mer-m8	24537773	24537792	150	-12.74
CAediting_27186	chr1_24538702_+	ENSG00000117602.10	ENST00000374395	hsa-miR-5693	24538698	24538704	7mer-m8	24538684	24538705	150	-22.82
CAediting_27165	chr1_24538469_+	ENSG00000117602.10	ENST00000374395	hsa-miR-5694	24538466	24538471	6mer	24538451	24538472	150	-23.03
CAediting_27145	chr1_24537789_+	ENSG00000117602.10	ENST00000374395	hsa-miR-5697	24537786	24537792	7mer-m8	24537771	24537793	149	-18.32
CAediting_27157	chr1_24537869_+	ENSG00000117602.10	ENST00000374395	hsa-miR-5787	24537866	24537871	6mer	24537852	24537872	145	-27.42
CAediting_27164	chr1_24538460_+	ENSG00000117602.10	ENST00000374395	hsa-miR-604	24538456	24538462	7mer-m8	24538447	24538463	145	-20.61
CAediting_27161	chr1_24538424_+	ENSG00000117602.10	ENST00000374395	hsa-miR-616-5p	24538418	24538425	8mer-1a	24538404	24538425	147	-6.8
CAediting_27142	chr1_24537779_+	ENSG00000117602.10	ENST00000374395	hsa-miR-6504-3p	24537774	24537780	7mer-m8	24537760	24537781	148	-14.2
CAediting_27143	chr1_24537780_+	ENSG00000117602.10	ENST00000374395	hsa-miR-6504-3p	24537774	24537780	7mer-m8	24537760	24537781	148	-14.2
CAediting_27122	chr1_24537648_+	ENSG00000117602.10	ENST00000374395	hsa-miR-6506-5p	24537642	24537648	7mer-m8	24537627	24537649	140	-16.44
CAediting_27144	chr1_24537785_+	ENSG00000117602.10	ENST00000374395	hsa-miR-6506-5p	24537779	24537785	7mer-m8	24537765	24537786	151	-16.08
CAediting_27177	chr1_24538624_+	ENSG00000117602.10	ENST00000374395	hsa-miR-664a-5p	24538618	24538624	7mer-m8	24538602	24538625	143	-16.43
CAediting_27151	chr1_24537821_+	ENSG00000117602.10	ENST00000374395	hsa-miR-671-3p	24537818	24537824	7mer-m8	24537807	24537825	143	-20.54
CAediting_27171	chr1_24538546_+	ENSG00000117602.10	ENST00000374395	hsa-miR-6720-3p	24538544	24538550	7mer-m8	24538530	24538551	152	-20.67
CAediting_27148	chr1_24537806_+	ENSG00000117602.10	ENST00000374395	hsa-miR-6747-3p	24537801	24537808	8mer-1a	24537787	24537808	150	-24.11
CAediting_27117	chr1_24537621_+	ENSG00000117602.10	ENST00000374395	hsa-miR-6765-3p	24537618	24537624	7mer-m8	24537605	24537625	140	-20.31
CAediting_27168	chr1_24538522_+	ENSG00000117602.10	ENST00000374395	hsa-miR-6765-5p	24538516	24538521	6mer	24538501	24538522	151	-30.57
CAediting_27146	chr1_24537796_+	ENSG00000117602.10	ENST00000374395	hsa-miR-6778-3p	24537792	24537798	7mer-m8	24537779	24537799	140	-14.56
CAediting_27182	chr1_24538673_+	ENSG00000117602.10	ENST00000374395	hsa-miR-6779-5p	24538666	24538673	8mer-1a	24538654	24538673	142	-21.01
CAediting_27118	chr1_24537635_+	ENSG00000117602.10	ENST00000374395	hsa-miR-6807-5p	24537628	24537634	7mer-m8	24537613	24537635	144	-20.25
CAediting_27152	chr1_24537827_+	ENSG00000117602.10	ENST00000374395	hsa-miR-6827-3p	24537825	24537832	8mer-1a	24537813	24537832	154	-18.5
CAediting_27153	chr1_24537829_+	ENSG00000117602.10	ENST00000374395	hsa-miR-6827-3p	24537825	24537832	8mer-1a	24537813	24537832	154	-18.5
CAediting_27162	chr1_24538426_+	ENSG00000117602.10	ENST00000374395	hsa-miR-6888-3p	24538423	24538429	7mer-m8	24538410	24538430	151	-14.42
CAediting_27163	chr1_24538430_+	ENSG00000117602.10	ENST00000374395	hsa-miR-6888-3p	24538423	24538429	7mer-m8	24538410	24538430	151	-14.42
CAediting_27142	chr1_24537779_+	ENSG00000117602.10	ENST00000374395	hsa-miR-7151-3p	24537772	24537779	8mer-1a	24537763	24537779	142	-13.26
CAediting_27117	chr1_24537621_+	ENSG00000117602.10	ENST00000374395	hsa-miR-7152-3p	24537615	24537621	7mer-m8	24537604	24537622	154	-26.28
CAediting_27168	chr1_24538522_+	ENSG00000117602.10	ENST00000374395	hsa-miR-7160-5p	24538517	24538523	7mer-m8	24538505	24538524	149	-18.69
CAediting_27158	chr1_24537878_+	ENSG00000117602.10	ENST00000374395	hsa-miR-744-3p	24537874	24537881	8mer-1a	24537860	24537881	140	-9.24
CAediting_27159	chr1_24537879_+	ENSG00000117602.10	ENST00000374395	hsa-miR-744-3p	24537874	24537881	8mer-1a	24537860	24537881	140	-9.24
CAediting_27175	chr1_24538612_+	ENSG00000117602.10	ENST00000374395	hsa-miR-7855-5p	24538609	24538614	6mer	24538595	24538615	140	-23.6
CAediting_27176	chr1_24538615_+	ENSG00000117602.10	ENST00000374395	hsa-miR-7855-5p	24538609	24538614	6mer	24538595	24538615	140	-23.6
CAediting_27132	chr1_24537721_+	ENSG00000117602.10	ENST00000374395	hsa-miR-876-5p	24537719	24537725	7mer-m8	24537705	24537726	150	-12.09
CAediting_27133	chr1_24537723_+	ENSG00000117602.10	ENST00000374395	hsa-miR-876-5p	24537719	24537725	7mer-m8	24537705	24537726	150	-12.09
CAediting_27169	chr1_24538531_+	ENSG00000117602.10	ENST00000374395	hsa-miR-887-5p	24538524	24538530	7mer-m8	24538512	24538531	143	-19.73
CAediting_27182	chr1_24538673_+	ENSG00000117602.10	ENST00000374395	hsa-miR-887-5p	24538667	24538674	8mer-1a	24538653	24538674	150	-16.93
CAediting_27183	chr1_24538674_+	ENSG00000117602.10	ENST00000374395	hsa-miR-887-5p	24538667	24538674	8mer-1a	24538653	24538674	150	-16.93
CAediting_27123	chr1_24537651_+	ENSG00000117602.10	ENST00000374395	hsa-miR-93-5p	24537648	24537654	7mer-m8	24537633	24537655	150	-19.03

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_748296	chr10_51299626_+	ENSG00000117602.10	ENST00000618490	hsa-miR-605-3p	24536837	24536844	8mer-1a	24536824	24536844	148	-19.27
CAediting_688081	chr9_63819627_+	ENSG00000117602.10	ENST00000618490	hsa-miR-4477b	24536462	24536468	7mer-m8	24536448	24536469	146	-9.79
CAediting_748296	chr10_51299626_+	ENSG00000117602.10	ENST00000374395	hsa-miR-605-3p	24536837	24536844	8mer-1a	24536824	24536844	148	-19.27
CAediting_980496	chr14_31014685_-	ENSG00000117602.10	ENST00000374395	hsa-miR-624-3p	24537050	24537057	8mer-1a	24537034	24537057	148	-13.08
CAediting_980496	chr14_31014685_-	ENSG00000117602.10	ENST00000374395	hsa-miR-624-3p	24539794	24539801	8mer-1a	24539780	24539801	142	-12.32
CAediting_980496	chr14_31014685_-	ENSG00000117602.10	ENST00000374395	hsa-miR-624-3p	24540890	24540896	7mer-m8	24540874	24540897	150	-19.18
CAediting_393	chr1_1167164_+	ENSG00000117602.10	ENST00000374395	hsa-miR-200b-3p	24537018	24537024	7mer-m8	24537002	24537025	141	-11.77
CAediting_688080	chr9_63819626_+	ENSG00000117602.10	ENST00000374395	hsa-miR-4477b	24540495	24540501	7mer-m8	24540481	24540502	145	-14.22
CAediting_688081	chr9_63819627_+	ENSG00000117602.10	ENST00000374395	hsa-miR-4477b	24536462	24536468	7mer-m8	24536448	24536469	146	-9.79
CAediting_748296	chr10_51299626_+	ENSG00000117602.10	ENST00000436717	hsa-miR-605-3p	24536837	24536844	8mer-1a	24536824	24536844	148	-19.27
CAediting_688081	chr9_63819627_+	ENSG00000117602.10	ENST00000436717	hsa-miR-4477b	24536462	24536468	7mer-m8	24536448	24536469	146	-9.79
CAediting_748296	chr10_51299626_+	ENSG00000117602.10	ENST00000616511	hsa-miR-605-3p	24536837	24536844	8mer-1a	24536824	24536844	148	-19.27
CAediting_688081	chr9_63819627_+	ENSG00000117602.10	ENST00000616511	hsa-miR-4477b	24536462	24536468	7mer-m8	24536448	24536469	146	-9.79
CAediting_86358	chr1_109598906_+	ENSG00000117602.10	ENST00000618490	hsa-miR-197-5p	24535899	24535906	8mer-1a	24535883	24535906	148	-21.51
CAediting_573001	chr7_92204086_-	ENSG00000117602.10	ENST00000618490	hsa-miR-1285-5p	24535369	24535375	7mer-m8	24535355	24535376	158	-20.96
CAediting_1229415	chr17_67471547_+	ENSG00000117602.10	ENST00000374395	hsa-miR-548aa	24537173	24537179	7mer-m8	24537153	24537180	145	-10.11
CAediting_1229415	chr17_67471547_+	ENSG00000117602.10	ENST00000374395	hsa-miR-548aa	24539004	24539010	7mer-m8	24538991	24539011	164	-14.52
CAediting_86358	chr1_109598906_+	ENSG00000117602.10	ENST00000374395	hsa-miR-197-5p	24535899	24535906	8mer-1a	24535883	24535906	148	-21.51
CAediting_117844	chr1_162342605_+	ENSG00000117602.10	ENST00000374395	hsa-miR-556-3p	24539932	24539938	7mer-m8	24539919	24539939	146	-15.49
CAediting_77128	chr1_85133844_+	ENSG00000117602.10	ENST00000374395	hsa-miR-4423-3p	24537025	24537031	7mer-m8	24537012	24537032	142	-13.71
CAediting_1399425	chr20_1392958_-	ENSG00000117602.10	ENST00000374395	hsa-miR-6869-5p	24540282	24540288	7mer-m8	24540268	24540289	158	-28.27
CAediting_414656	chr5_72878640_+	ENSG00000117602.10	ENST00000374395	hsa-miR-4804-3p	24537237	24537244	8mer-1a	24537224	24537244	140	-12.16
CAediting_580943	chr7_100356700_+	ENSG00000117602.10	ENST00000374395	hsa-miR-6840-3p	24538493	24538499	7mer-m8	24538479	24538500	144	-27.77
CAediting_573001	chr7_92204086_-	ENSG00000117602.10	ENST00000374395	hsa-miR-1285-5p	24535369	24535375	7mer-m8	24535355	24535376	158	-20.96
CAediting_86358	chr1_109598906_+	ENSG00000117602.10	ENST00000436717	hsa-miR-197-5p	24535899	24535906	8mer-1a	24535883	24535906	148	-21.51
CAediting_573001	chr7_92204086_-	ENSG00000117602.10	ENST00000436717	hsa-miR-1285-5p	24535369	24535375	7mer-m8	24535355	24535376	158	-20.96
CAediting_86358	chr1_109598906_+	ENSG00000117602.10	ENST00000616511	hsa-miR-197-5p	24535899	24535906	8mer-1a	24535883	24535906	148	-21.51
CAediting_573001	chr7_92204086_-	ENSG00000117602.10	ENST00000616511	hsa-miR-1285-5p	24535369	24535375	7mer-m8	24535355	24535376	158	-20.96

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_604450	chr7_133034877_-	ENSG00000117602.10	ENST00000618490	hsa-miR-3654	24536143	24536149	7mer-1a	24536131	24536149	141	-18.06
CAediting_1229413	chr17_67471544_+	ENSG00000117602.10	ENST00000618490	hsa-miR-548aa	24536243	24536248	6mer	24536223	24536249	140	-12.69
CAediting_1229414	chr17_67471546_+	ENSG00000117602.10	ENST00000618490	hsa-miR-548aa	24536243	24536248	6mer	24536223	24536249	140	-12.69
CAediting_1229415	chr17_67471547_+	ENSG00000117602.10	ENST00000618490	hsa-miR-548aa	24536243	24536248	6mer	24536223	24536249	140	-12.69
CAediting_86358	chr1_109598906_+	ENSG00000117602.10	ENST00000374395	hsa-miR-197-5p	24540281	24540288	8mer-1a	24540266	24540288	152	-20.39
CAediting_604450	chr7_133034877_-	ENSG00000117602.10	ENST00000374395	hsa-miR-3654	24536143	24536149	7mer-1a	24536131	24536149	141	-18.06
CAediting_1054808	chr15_66496985_-	ENSG00000117602.10	ENST00000374395	hsa-miR-4512	24535947	24535953	7mer-m8	24535935	24535954	152	-18.41
CAediting_396018	chr5_1062918_-	ENSG00000117602.10	ENST00000374395	hsa-miR-4635	24538338	24538344	7mer-m8	24538325	24538345	141	-11.47
CAediting_396018	chr5_1062918_-	ENSG00000117602.10	ENST00000374395	hsa-miR-4635	24540631	24540637	7mer-m8	24540620	24540638	144	-14.31
CAediting_1524209	chrX_134546392_-	ENSG00000117602.10	ENST00000374395	hsa-miR-503-5p	24540574	24540579	6mer	24540558	24540580	149	-21.07
CAediting_1229413	chr17_67471544_+	ENSG00000117602.10	ENST00000374395	hsa-miR-548aa	24536243	24536248	6mer	24536223	24536249	140	-12.69
CAediting_1229414	chr17_67471546_+	ENSG00000117602.10	ENST00000374395	hsa-miR-548aa	24536243	24536248	6mer	24536223	24536249	140	-12.69
CAediting_1229415	chr17_67471547_+	ENSG00000117602.10	ENST00000374395	hsa-miR-548aa	24536243	24536248	6mer	24536223	24536249	140	-12.69
CAediting_117844	chr1_162342605_+	ENSG00000117602.10	ENST00000374395	hsa-miR-556-3p	24537110	24537116	7mer-m8	24537095	24537117	141	-8.64
CAediting_228905	chr2_188297554_+	ENSG00000117602.10	ENST00000374395	hsa-miR-561-3p	24537301	24537308	8mer-1a	24537287	24537308	140	-4.19
CAediting_748296	chr10_51299626_+	ENSG00000117602.10	ENST00000374395	hsa-miR-605-3p	24538229	24538235	7mer-m8	24538217	24538236	151	-12.44
CAediting_980496	chr14_31014685_-	ENSG00000117602.10	ENST00000374395	hsa-miR-624-3p	24540012	24540018	7mer-m8	24539997	24540019	148	-9.63
CAediting_580943	chr7_100356700_+	ENSG00000117602.10	ENST00000374395	hsa-miR-6840-3p	24539158	24539164	7mer-m8	24539141	24539165	150	-23.49
CAediting_604450	chr7_133034877_-	ENSG00000117602.10	ENST00000436717	hsa-miR-3654	24536143	24536149	7mer-1a	24536131	24536149	141	-18.06
CAediting_1229413	chr17_67471544_+	ENSG00000117602.10	ENST00000436717	hsa-miR-548aa	24536243	24536248	6mer	24536223	24536249	140	-12.69
CAediting_1229414	chr17_67471546_+	ENSG00000117602.10	ENST00000436717	hsa-miR-548aa	24536243	24536248	6mer	24536223	24536249	140	-12.69
CAediting_1229415	chr17_67471547_+	ENSG00000117602.10	ENST00000436717	hsa-miR-548aa	24536243	24536248	6mer	24536223	24536249	140	-12.69
CAediting_604450	chr7_133034877_-	ENSG00000117602.10	ENST00000616511	hsa-miR-3654	24536143	24536149	7mer-1a	24536131	24536149	141	-18.06
CAediting_1229413	chr17_67471544_+	ENSG00000117602.10	ENST00000616511	hsa-miR-548aa	24536243	24536248	6mer	24536223	24536249	140	-12.69
CAediting_1229414	chr17_67471546_+	ENSG00000117602.10	ENST00000616511	hsa-miR-548aa	24536243	24536248	6mer	24536223	24536249	140	-12.69
CAediting_1229415	chr17_67471547_+	ENSG00000117602.10	ENST00000616511	hsa-miR-548aa	24536243	24536248	6mer	24536223	24536249	140	-12.69

Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for RCAN3

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000374395.7	protein_coding

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_27117	ENST00000374395.7	chr1_24537621_+	-2103.40	-2097.20	-2139.60
CAediting_27118	ENST00000374395.7	chr1_24537635_+	-2096.80	-2097.20	-2139.60
CAediting_27119	ENST00000374395.7	chr1_24537637_+	-2102.60	-2097.20	-2139.60
CAediting_27120	ENST00000374395.7	chr1_24537642_+	-2097.30	-2097.20	-2139.60
CAediting_27121	ENST00000374395.7	chr1_24537643_+	-2097.20	-2097.20	-2139.60
CAediting_27122	ENST00000374395.7	chr1_24537648_+	-2096.50	-2097.20	-2139.60
CAediting_27123	ENST00000374395.7	chr1_24537651_+	-2096.80	-2097.20	-2139.60
CAediting_27124	ENST00000374395.7	chr1_24537689_+	-2096.50	-2097.20	-2139.60
CAediting_27125	ENST00000374395.7	chr1_24537692_+	-2096.30	-2097.20	-2139.60
CAediting_27126	ENST00000374395.7	chr1_24537697_+	-2103.20	-2097.20	-2139.60
CAediting_27127	ENST00000374395.7	chr1_24537698_+	-2097.10	-2097.20	-2139.60
CAediting_27128	ENST00000374395.7	chr1_24537709_+	-2104.40	-2097.20	-2139.60
CAediting_27129	ENST00000374395.7	chr1_24537712_+	-2097.60	-2097.20	-2139.60
CAediting_27130	ENST00000374395.7	chr1_24537713_+	-2097.20	-2097.20	-2139.60
CAediting_27131	ENST00000374395.7	chr1_24537715_+	-2103.00	-2097.20	-2139.60
CAediting_27132	ENST00000374395.7	chr1_24537721_+	-2096.70	-2097.20	-2139.60
CAediting_27133	ENST00000374395.7	chr1_24537723_+	-2094.20	-2097.20	-2139.60
CAediting_27134	ENST00000374395.7	chr1_24537738_+	-2097.20	-2097.20	-2139.60
CAediting_27135	ENST00000374395.7	chr1_24537739_+	-2097.60	-2097.20	-2139.60
CAediting_27136	ENST00000374395.7	chr1_24537741_+	-2097.30	-2097.20	-2139.60
CAediting_27137	ENST00000374395.7	chr1_24537742_+	-2097.30	-2097.20	-2139.60
CAediting_27138	ENST00000374395.7	chr1_24537748_+	-2097.30	-2097.20	-2139.60
CAediting_27139	ENST00000374395.7	chr1_24537753_+	-2096.90	-2097.20	-2139.60
CAediting_27140	ENST00000374395.7	chr1_24537769_+	-2100.10	-2097.20	-2139.60
CAediting_27141	ENST00000374395.7	chr1_24537771_+	-2100.60	-2097.20	-2139.60
CAediting_27142	ENST00000374395.7	chr1_24537779_+	-2096.90	-2097.20	-2139.60
CAediting_27143	ENST00000374395.7	chr1_24537780_+	-2103.40	-2097.20	-2139.60
CAediting_27144	ENST00000374395.7	chr1_24537785_+	-2096.50	-2097.20	-2139.60
CAediting_27145	ENST00000374395.7	chr1_24537789_+	-2097.20	-2097.20	-2139.60
CAediting_27146	ENST00000374395.7	chr1_24537796_+	-2096.30	-2097.20	-2139.60
CAediting_27147	ENST00000374395.7	chr1_24537802_+	-2096.30	-2097.20	-2139.60
CAediting_27148	ENST00000374395.7	chr1_24537806_+	-2096.50	-2097.20	-2139.60
CAediting_27149	ENST00000374395.7	chr1_24537809_+	-2096.30	-2097.20	-2139.60
CAediting_27150	ENST00000374395.7	chr1_24537812_+	-2097.20	-2097.20	-2139.60
CAediting_27151	ENST00000374395.7	chr1_24537821_+	-2097.20	-2097.20	-2139.60
CAediting_27152	ENST00000374395.7	chr1_24537827_+	-2096.30	-2097.20	-2139.60
CAediting_27153	ENST00000374395.7	chr1_24537829_+	-2104.40	-2097.20	-2139.60
CAediting_27154	ENST00000374395.7	chr1_24537849_+	-2096.30	-2097.20	-2139.60
CAediting_27155	ENST00000374395.7	chr1_24537854_+	-2096.80	-2097.20	-2139.60
CAediting_27156	ENST00000374395.7	chr1_24537864_+	-2102.60	-2097.20	-2139.60
CAediting_27157	ENST00000374395.7	chr1_24537869_+	-2096.50	-2097.20	-2139.60
CAediting_27158	ENST00000374395.7	chr1_24537878_+	-2103.20	-2097.20	-2139.60
CAediting_27159	ENST00000374395.7	chr1_24537879_+	-2097.40	-2097.20	-2139.60
CAediting_27160	ENST00000374395.7	chr1_24537888_+	-2096.30	-2097.20	-2139.60
CAediting_27161	ENST00000374395.7	chr1_24538424_+	-2096.30	-2097.20	-2139.60
CAediting_27162	ENST00000374395.7	chr1_24538426_+	-2096.60	-2097.20	-2139.60
CAediting_27163	ENST00000374395.7	chr1_24538430_+	-2096.30	-2097.20	-2139.60
CAediting_27164	ENST00000374395.7	chr1_24538460_+	-2100.90	-2097.20	-2139.60
CAediting_27165	ENST00000374395.7	chr1_24538469_+	-2096.60	-2097.20	-2139.60
CAediting_27166	ENST00000374395.7	chr1_24538479_+	-2096.80	-2097.20	-2139.60
CAediting_27167	ENST00000374395.7	chr1_24538509_+	-2097.50	-2097.20	-2139.60
CAediting_27168	ENST00000374395.7	chr1_24538522_+	-2096.50	-2097.20	-2139.60
CAediting_27169	ENST00000374395.7	chr1_24538531_+	-2096.90	-2097.20	-2139.60
CAediting_27170	ENST00000374395.7	chr1_24538544_+	-2097.20	-2097.20	-2139.60
CAediting_27171	ENST00000374395.7	chr1_24538546_+	-2096.50	-2097.20	-2139.60
CAediting_27172	ENST00000374395.7	chr1_24538594_+	-2097.30	-2097.20	-2139.60
CAediting_27173	ENST00000374395.7	chr1_24538595_+	-2096.90	-2097.20	-2139.60
CAediting_27174	ENST00000374395.7	chr1_24538598_+	-2096.90	-2097.20	-2139.60
CAediting_27175	ENST00000374395.7	chr1_24538612_+	-2096.80	-2097.20	-2139.60
CAediting_27176	ENST00000374395.7	chr1_24538615_+	-2097.20	-2097.20	-2139.60
CAediting_27177	ENST00000374395.7	chr1_24538624_+	-2096.50	-2097.20	-2139.60
CAediting_27178	ENST00000374395.7	chr1_24538627_+	-2099.80	-2097.20	-2139.60
CAediting_27179	ENST00000374395.7	chr1_24538636_+	-2095.60	-2097.20	-2139.60
CAediting_27180	ENST00000374395.7	chr1_24538648_+	-2100.20	-2097.20	-2139.60
CAediting_27181	ENST00000374395.7	chr1_24538652_+	-2099.20	-2097.20	-2139.60
CAediting_27182	ENST00000374395.7	chr1_24538673_+	-2096.90	-2097.20	-2139.60
CAediting_27183	ENST00000374395.7	chr1_24538674_+	-2097.30	-2097.20	-2139.60
CAediting_27184	ENST00000374395.7	chr1_24538675_+	-2096.90	-2097.20	-2139.60
CAediting_27185	ENST00000374395.7	chr1_24538698_+	-2096.30	-2097.20	-2139.60
CAediting_27186	ENST00000374395.7	chr1_24538702_+	-2096.80	-2097.20	-2139.60

Top

Relation with ADAR for RCAN3

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
BRCA	CAediting_27121	chr1_24537643_+	.	.	0.0339338457729075	0.253892681993779	.	.
BRCA	CAediting_27124	chr1_24537689_+	0.0159808706468582	0.226221551132817	.	.	.	.
THCA	CAediting_27124	chr1_24537689_+	0.016257509067228	0.27135026625926	.	.	0.00941549288745204	0.292274589649356
SKCM	CAediting_27126	chr1_24537697_+	0.00406306039364046	0.336938160656141	.	.	.	.
BRCA	CAediting_27128	chr1_24537709_+	0.0002842733274808	0.320518213632003	.	.	.	.
THCA	CAediting_27128	chr1_24537709_+	0.0164134088981966	0.267581972779536	.	.	.	.
SKCM	CAediting_27128	chr1_24537709_+	0.00201703658127119	0.346571812208117	.	.	.	.
BRCA	CAediting_27129	chr1_24537712_+	0.00643994678268217	0.211307792311216	.	.	.	.
STAD	CAediting_27129	chr1_24537712_+	0.0179057379319024	0.265797483635928	.	.	.	.
OV	CAediting_27129	chr1_24537712_+	0.00609211206655973	0.306024130210762	.	.	.	.
SKCM	CAediting_27129	chr1_24537712_+	0.0115639908346807	0.263653736375877	.	.	.	.
BRCA	CAediting_27131	chr1_24537715_+	0.00174050106677387	0.225716998566729	.	.	.	.
OV	CAediting_27131	chr1_24537715_+	0.018322899075867	0.258440750426904	.	.	.	.
SKCM	CAediting_27131	chr1_24537715_+	0.0062809284110599	0.271533833176938	.	.	.	.
BRCA	CAediting_27144	chr1_24537785_+	.	.	0.00154491352538584	0.30810062882237	.	.
PRAD	CAediting_27144	chr1_24537785_+	0.00714547944503656	0.250667212907333	.	.	.	.
ESCA	CAediting_27145	chr1_24537789_+	0.0244220352337188	0.266947828806066	0.0270369454407288	0.26243602168477	.	.
THCA	CAediting_27158	chr1_24537878_+	0.00382777999616361	0.223978345295673	.	.	.	.
PRAD	CAediting_27162	chr1_24538426_+	0.00362090364454172	0.350680358438284	.	.	0.0255543140054897	0.272732896069818
BRCA	CAediting_27177	chr1_24538624_+	0.00578840762831881	0.25918742421829	.	.	.	.
PRAD	CAediting_27177	chr1_24538624_+	0.0453648296717669	0.150206594945787	.	.	.	.
BRCA	CAediting_27185	chr1_24538698_+	0.0145089895060439	0.177100627940265	.	.	.	.

Top

Relation with cancer stages for RCAN3

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
ESCA	pathologic_stage	CAediting_27126	chr1_24537697_+	0.0371372821743632	0.242784720801317
ESCA	pathologic_stage	CAediting_27127	chr1_24537698_+	0.0470217188848909	0.257480321763217
ESCA	pathologic_stage	CAediting_27162	chr1_24538426_+	0.0304504623181433	0.282039683623752
STAD	pathologic_stage	CAediting_27129	chr1_24537712_+	0.0313323298873805	0.24719667853527
STAD	pathologic_stage	CAediting_27130	chr1_24537713_+	0.00144620860044039	0.37101712852344
STAD	pathologic_stage	CAediting_27131	chr1_24537715_+	0.0274576103860127	0.254669214762346
STAD	pathologic_stage	CAediting_27143	chr1_24537780_+	0.00458436175554637	0.266010658524274
STAD	pathologic_stage	CAediting_27165	chr1_24538469_+	0.0294244416188982	-0.281358948180299
STAD	pathologic_stage	CAediting_27170	chr1_24538544_+	0.0397017543581012	0.27823219705847

Top

Relation with survival for RCAN3

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
HNSC	CAediting_27158	chr1_24537878_+	0.00198119560994836	0.0298322	121.584
STAD	CAediting_27130	chr1_24537713_+	0.0128287239390115	0.00482234	197.433

Top

RelatedDrugs for RCAN3

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

Top

RelatedDiseases for RCAN3

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene