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Editing gene: BTN3A2 (CAeditome ID:11118)

Gene summary for BTN3A2

Gene summary

Gene information	Gene symbol	BTN3A2
	Gene ID	11118
	Gene name	butyrophilin subfamily 3 member A2
	Synonyms	BT3.2\|BTF4\|BTN3.2\|CD277
	Cytomap	6p22.2
	Type of gene	protein-coding
	Description	butyrophilin subfamily 3 member A2butyrophilin protein
	Modification date	20210518
	UniProtAcc	P78410
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
BTN3A2	GO:0005886	Butyrophilin subfamily 3 member A2	22767497

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RNA A-to-I events for BTN3A2

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000186470.12

RNA A-to-I editing events in Cancer.

CAediting_466303(26370987, +), CAediting_466304(26371009, +), CAediting_466305(26371010, +), CAediting_466306(26371036, +), CAediting_466307(26371085, +), CAediting_466308(26371099, +), CAediting_466309(26371100, +), CAediting_466310(26371101, +), CAediting_466311(26371102, +), CAediting_466312(26371103, +), CAediting_466313(26371115, +), CAediting_466314(26371119, +), CAediting_466315(26371155, +), CAediting_466316(26371164, +), CAediting_466317(26371173, +), CAediting_466318(26371177, +), CAediting_466319(26371187, +), CAediting_466320(26371243, +), CAediting_466321(26371703, +), CAediting_466322(26371710, +), CAediting_466323(26371715, +), CAediting_466324(26371772, +), CAediting_466325(26371779, +), CAediting_466326(26371804, +), CAediting_466327(26371834, +), CAediting_466328(26371859, +), CAediting_466329(26371931, +), CAediting_466330(26371941, +), CAediting_466331(26371953, +), CAediting_466332(26373010, +), CAediting_466333(26375935, +), CAediting_466334(26375938, +), CAediting_466335(26375951, +), CAediting_466336(26375952, +), CAediting_466337(26375968, +), CAediting_466338(26375995, +), CAediting_466339(26376003, +), CAediting_466340(26376019, +), CAediting_466341(26376066, +), CAediting_466342(26376092, +), CAediting_466343(26376119, +), CAediting_466344(26376163, +), CAediting_466345(26376213, +), CAediting_466346(26376214, +), CAediting_466347(26376238, +),

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RNA editing positional annotations for BTN3A2 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_466303	chr6_26370987_+	ncRNA_intronic
CAediting_466304	chr6_26371009_+	ncRNA_intronic
CAediting_466305	chr6_26371010_+	ncRNA_intronic
CAediting_466306	chr6_26371036_+	ncRNA_intronic
CAediting_466307	chr6_26371085_+	ncRNA_intronic
CAediting_466308	chr6_26371099_+	ncRNA_intronic
CAediting_466309	chr6_26371100_+	ncRNA_intronic
CAediting_466310	chr6_26371101_+	ncRNA_intronic
CAediting_466311	chr6_26371102_+	ncRNA_intronic
CAediting_466312	chr6_26371103_+	ncRNA_intronic
CAediting_466313	chr6_26371115_+	ncRNA_intronic
CAediting_466314	chr6_26371119_+	ncRNA_intronic
CAediting_466315	chr6_26371155_+	ncRNA_intronic
CAediting_466316	chr6_26371164_+	ncRNA_intronic
CAediting_466317	chr6_26371173_+	ncRNA_intronic
CAediting_466318	chr6_26371177_+	ncRNA_intronic
CAediting_466319	chr6_26371187_+	ncRNA_intronic
CAediting_466320	chr6_26371243_+	ncRNA_intronic
CAediting_466321	chr6_26371703_+	ncRNA_intronic
CAediting_466322	chr6_26371710_+	ncRNA_intronic
CAediting_466323	chr6_26371715_+	ncRNA_intronic
CAediting_466324	chr6_26371772_+	ncRNA_intronic
CAediting_466325	chr6_26371779_+	ncRNA_intronic
CAediting_466326	chr6_26371804_+	ncRNA_intronic
CAediting_466327	chr6_26371834_+	ncRNA_intronic
CAediting_466328	chr6_26371859_+	ncRNA_intronic
CAediting_466329	chr6_26371931_+	ncRNA_intronic
CAediting_466330	chr6_26371941_+	ncRNA_intronic
CAediting_466331	chr6_26371953_+	ncRNA_intronic
CAediting_466332	chr6_26373010_+	exonic
CAediting_466333	chr6_26375935_+	UTR3
CAediting_466334	chr6_26375938_+	UTR3
CAediting_466335	chr6_26375951_+	UTR3
CAediting_466336	chr6_26375952_+	UTR3
CAediting_466337	chr6_26375968_+	UTR3
CAediting_466338	chr6_26375995_+	UTR3
CAediting_466339	chr6_26376003_+	UTR3
CAediting_466340	chr6_26376019_+	UTR3
CAediting_466341	chr6_26376066_+	UTR3
CAediting_466342	chr6_26376092_+	UTR3
CAediting_466343	chr6_26376119_+	UTR3
CAediting_466344	chr6_26376163_+	UTR3
CAediting_466345	chr6_26376213_+	UTR3
CAediting_466346	chr6_26376214_+	UTR3
CAediting_466347	chr6_26376238_+	UTR3

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_466303	chr6_26370987_+	SINE	Alu	AluSz6
CAediting_466304	chr6_26371009_+	SINE	Alu	AluSz6
CAediting_466305	chr6_26371010_+	SINE	Alu	AluSz6
CAediting_466306	chr6_26371036_+	SINE	Alu	AluSz6
CAediting_466307	chr6_26371085_+	SINE	Alu	AluSz6
CAediting_466308	chr6_26371099_+	SINE	Alu	AluSz6
CAediting_466309	chr6_26371100_+	SINE	Alu	AluSz6
CAediting_466310	chr6_26371101_+	SINE	Alu	AluSz6
CAediting_466311	chr6_26371102_+	SINE	Alu	AluSz6
CAediting_466312	chr6_26371103_+	SINE	Alu	AluSz6
CAediting_466313	chr6_26371115_+	SINE	Alu	AluSz6
CAediting_466314	chr6_26371119_+	SINE	Alu	AluSz6
CAediting_466315	chr6_26371155_+	SINE	Alu	AluSz6
CAediting_466316	chr6_26371164_+	SINE	Alu	AluSz6
CAediting_466317	chr6_26371173_+	SINE	Alu	AluSz6
CAediting_466318	chr6_26371177_+	SINE	Alu	AluSz6
CAediting_466319	chr6_26371187_+	SINE	Alu	AluSz6
CAediting_466320	chr6_26371243_+	SINE	Alu	AluSz6
CAediting_466321	chr6_26371703_+	SINE	Alu	AluSz
CAediting_466322	chr6_26371710_+	SINE	Alu	AluSz
CAediting_466323	chr6_26371715_+	SINE	Alu	AluSz
CAediting_466324	chr6_26371772_+	SINE	Alu	AluSz
CAediting_466325	chr6_26371779_+	SINE	Alu	AluSz
CAediting_466326	chr6_26371804_+	SINE	Alu	AluSz
CAediting_466327	chr6_26371834_+	SINE	Alu	AluSz
CAediting_466328	chr6_26371859_+	SINE	Alu	AluSz
CAediting_466329	chr6_26371931_+	SINE	Alu	AluSz
CAediting_466330	chr6_26371941_+	SINE	Alu	AluSz
CAediting_466331	chr6_26371953_+	SINE	Alu	AluSz
CAediting_466333	chr6_26375935_+	SINE	Alu	AluY
CAediting_466334	chr6_26375938_+	SINE	Alu	AluY
CAediting_466335	chr6_26375951_+	SINE	Alu	AluY
CAediting_466336	chr6_26375952_+	SINE	Alu	AluY
CAediting_466337	chr6_26375968_+	SINE	Alu	AluY
CAediting_466338	chr6_26375995_+	SINE	Alu	AluY
CAediting_466339	chr6_26376003_+	SINE	Alu	AluY
CAediting_466340	chr6_26376019_+	SINE	Alu	AluY
CAediting_466341	chr6_26376066_+	SINE	Alu	AluY
CAediting_466342	chr6_26376092_+	SINE	Alu	AluY
CAediting_466343	chr6_26376119_+	SINE	Alu	AluY
CAediting_466344	chr6_26376163_+	SINE	Alu	AluY
CAediting_466345	chr6_26376213_+	SINE	Alu	AluY
CAediting_466346	chr6_26376214_+	SINE	Alu	AluY
CAediting_466347	chr6_26376238_+	SINE	Alu	AluY

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RNA A-to-I editing events in the alternative splicing sites for BTN3A2

RNA A-to-I editing(s) in the alternative splicing sites.

AStype	CAeditomID	Editing position	AS position	AS direction	Exonic location	Wildtype sequence	Wildtype splicing strength	RNA edited sequence	RNA edited splicing strength
ES	CAediting_466338	chr6_26375995_+	26375989:26375997	5SS	0+4i	AAGGTCAGG	6.23	AAGGTCGGG	3.63

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000186470.12.BTN3A2.

Correlation between RNA A-to-I editing and PSI for ENSG00000186470.12.BTN3A2.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for BTN3A2

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for BTN3A2

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for BTN3A2

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_466337	chr6_26375968_+	ENSG00000186470.12	ENST00000396934	hsa-miR-519d-5p	26375961	26375967	7mer-m8	26375944	26375968	155.00	-18.02
CAediting_466337	chr6_26375968_+	ENSG00000186470.12	ENST00000508906	hsa-miR-519d-5p	26375961	26375967	7mer-m8	26375944	26375968	155.00	-18.02
CAediting_466335	chr6_26375951_+	ENSG00000186470.12	ENST00000396934	hsa-miR-513a-5p	26375945	26375951	7mer-m8	26375935	26375952	147.00	-17.06
CAediting_466335	chr6_26375951_+	ENSG00000186470.12	ENST00000396934	hsa-miR-513a-5p	26375945	26375951	7mer-m8	26375935	26375952	147.00	-17.06
CAediting_466335	chr6_26375951_+	ENSG00000186470.12	ENST00000508906	hsa-miR-513a-5p	26375945	26375951	7mer-m8	26375935	26375952	147.00	-17.06
CAediting_466335	chr6_26375951_+	ENSG00000186470.12	ENST00000508906	hsa-miR-513a-5p	26375945	26375951	7mer-m8	26375935	26375952	147.00	-17.06
CAediting_466342	chr6_26376092_+	ENSG00000186470.12	ENST00000396934	hsa-miR-140-3p	26376087	26376093	7mer-m8	26376074	26376094	145.00	-20.15
CAediting_466342	chr6_26376092_+	ENSG00000186470.12	ENST00000508906	hsa-miR-140-3p	26376087	26376093	7mer-m8	26376074	26376094	145.00	-20.15
CAediting_466345	chr6_26376213_+	ENSG00000186470.12	ENST00000396934	hsa-miR-516a-5p	26376209	26376216	8mer-1a	26376195	26376216	149.00	-18.36
CAediting_466345	chr6_26376213_+	ENSG00000186470.12	ENST00000396934	hsa-miR-516a-5p	26376209	26376216	8mer-1a	26376195	26376216	149.00	-18.36
CAediting_466345	chr6_26376213_+	ENSG00000186470.12	ENST00000508906	hsa-miR-516a-5p	26376209	26376216	8mer-1a	26376195	26376216	149.00	-18.36
CAediting_466345	chr6_26376213_+	ENSG00000186470.12	ENST00000508906	hsa-miR-516a-5p	26376209	26376216	8mer-1a	26376195	26376216	149.00	-18.36
CAediting_466346	chr6_26376214_+	ENSG00000186470.12	ENST00000396934	hsa-miR-1200	26376209	26376216	8mer-1a	26376195	26376216	147.00	-17.62
CAediting_466346	chr6_26376214_+	ENSG00000186470.12	ENST00000396934	hsa-miR-4324	26376208	26376215	8mer-1a	26376196	26376215	145.00	-13.71
CAediting_466346	chr6_26376214_+	ENSG00000186470.12	ENST00000396934	hsa-miR-4329	26376207	26376213	7mer-m8	26376197	26376214	143.00	-17.23
CAediting_466346	chr6_26376214_+	ENSG00000186470.12	ENST00000508906	hsa-miR-1200	26376209	26376216	8mer-1a	26376195	26376216	147.00	-17.62
CAediting_466346	chr6_26376214_+	ENSG00000186470.12	ENST00000508906	hsa-miR-4324	26376208	26376215	8mer-1a	26376196	26376215	145.00	-13.71
CAediting_466346	chr6_26376214_+	ENSG00000186470.12	ENST00000508906	hsa-miR-4329	26376207	26376213	7mer-m8	26376197	26376214	143.00	-17.23
CAediting_466347	chr6_26376238_+	ENSG00000186470.12	ENST00000396934	hsa-miR-3124-3p	26376235	26376242	8mer-1a	26376221	26376242	140.00	-8.97
CAediting_466347	chr6_26376238_+	ENSG00000186470.12	ENST00000508906	hsa-miR-3124-3p	26376235	26376242	8mer-1a	26376221	26376242	140.00	-8.97
CAediting_466336	chr6_26375952_+	ENSG00000186470.12	ENST00000396934	hsa-miR-3117-3p	26375950	26375956	7mer-m8	26375932	26375957	146.00	-14.56
CAediting_466336	chr6_26375952_+	ENSG00000186470.12	ENST00000396934	hsa-miR-4759	26375949	26375956	8mer-1a	26375936	26375956	149.00	-14.49
CAediting_466336	chr6_26375952_+	ENSG00000186470.12	ENST00000508906	hsa-miR-3117-3p	26375950	26375956	7mer-m8	26375932	26375957	146.00	-14.56
CAediting_466336	chr6_26375952_+	ENSG00000186470.12	ENST00000508906	hsa-miR-4759	26375949	26375956	8mer-1a	26375936	26375956	149.00	-14.49

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_466335	chr6_26375951_+	ENSG00000186470.12	ENST00000396934	hsa-miR-10399-5p	26375946	26375952	7mer-m8	26375931	26375953	142	-8.86
CAediting_466336	chr6_26375952_+	ENSG00000186470.12	ENST00000396934	hsa-miR-10399-5p	26375946	26375952	7mer-m8	26375931	26375953	142	-8.86
CAediting_466343	chr6_26376119_+	ENSG00000186470.12	ENST00000396934	hsa-miR-1976	26376116	26376123	8mer-1a	26376103	26376123	149	-24.39
CAediting_466340	chr6_26376019_+	ENSG00000186470.12	ENST00000396934	hsa-miR-3152-3p	26376015	26376021	7mer-m8	26376002	26376022	145	-18.08
CAediting_466337	chr6_26375968_+	ENSG00000186470.12	ENST00000396934	hsa-miR-3614-3p	26375965	26375971	7mer-m8	26375948	26375972	155	-17.59
CAediting_466338	chr6_26375995_+	ENSG00000186470.12	ENST00000396934	hsa-miR-378a-5p	26375991	26375997	7mer-m8	26375976	26375998	148	-24.06
CAediting_466337	chr6_26375968_+	ENSG00000186470.12	ENST00000396934	hsa-miR-4297	26375964	26375970	7mer-m8	26375956	26375971	142	-15.84
CAediting_466344	chr6_26376163_+	ENSG00000186470.12	ENST00000396934	hsa-miR-4638-5p	26376157	26376164	8mer-1a	26376145	26376164	146	-21.99
CAediting_466341	chr6_26376066_+	ENSG00000186470.12	ENST00000396934	hsa-miR-4735-5p	26376060	26376066	7mer-m8	26376046	26376067	140	-5.1
CAediting_466333	chr6_26375935_+	ENSG00000186470.12	ENST00000396934	hsa-miR-5008-3p	26375929	26375935	7mer-m8	26375920	26375936	146	-21.53
CAediting_466345	chr6_26376213_+	ENSG00000186470.12	ENST00000396934	hsa-miR-526b-5p	26376209	26376216	8mer-1a	26376192	26376216	155	-18.07
CAediting_466346	chr6_26376214_+	ENSG00000186470.12	ENST00000396934	hsa-miR-526b-5p	26376209	26376216	8mer-1a	26376192	26376216	155	-18.07
CAediting_466337	chr6_26375968_+	ENSG00000186470.12	ENST00000396934	hsa-miR-5581-5p	26375964	26375970	7mer-m8	26375950	26375971	149	-21.59
CAediting_466347	chr6_26376238_+	ENSG00000186470.12	ENST00000396934	hsa-miR-627-3p	26376235	26376242	8mer-1a	26376223	26376242	150	-10.66
CAediting_466335	chr6_26375951_+	ENSG00000186470.12	ENST00000396934	hsa-miR-6504-3p	26375946	26375952	7mer-m8	26375932	26375953	144	-9.54
CAediting_466336	chr6_26375952_+	ENSG00000186470.12	ENST00000396934	hsa-miR-6504-3p	26375946	26375952	7mer-m8	26375932	26375953	144	-9.54
CAediting_466333	chr6_26375935_+	ENSG00000186470.12	ENST00000396934	hsa-miR-6737-3p	26375929	26375935	7mer-m8	26375915	26375936	143	-19.14
CAediting_466343	chr6_26376119_+	ENSG00000186470.12	ENST00000396934	hsa-miR-6747-3p	26376114	26376121	8mer-1a	26376099	26376121	149	-23.68
CAediting_466335	chr6_26375951_+	ENSG00000186470.12	ENST00000396934	hsa-miR-7151-3p	26375944	26375951	8mer-1a	26375935	26375951	150	-17.72
CAediting_466333	chr6_26375935_+	ENSG00000186470.12	ENST00000396934	hsa-miR-7157-3p	26375929	26375935	7mer-m8	26375915	26375936	140	-18.03
CAediting_466342	chr6_26376092_+	ENSG00000186470.12	ENST00000396934	hsa-miR-8052	26376091	26376097	7mer-1a	26376077	26376097	141	-21.07
CAediting_466335	chr6_26375951_+	ENSG00000186470.12	ENST00000508906	hsa-miR-10399-5p	26375946	26375952	7mer-m8	26375931	26375953	142	-8.86
CAediting_466336	chr6_26375952_+	ENSG00000186470.12	ENST00000508906	hsa-miR-10399-5p	26375946	26375952	7mer-m8	26375931	26375953	142	-8.86
CAediting_466343	chr6_26376119_+	ENSG00000186470.12	ENST00000508906	hsa-miR-1976	26376116	26376123	8mer-1a	26376103	26376123	149	-24.39
CAediting_466340	chr6_26376019_+	ENSG00000186470.12	ENST00000508906	hsa-miR-3152-3p	26376015	26376021	7mer-m8	26376002	26376022	145	-18.08
CAediting_466337	chr6_26375968_+	ENSG00000186470.12	ENST00000508906	hsa-miR-3614-3p	26375965	26375971	7mer-m8	26375948	26375972	155	-17.59
CAediting_466338	chr6_26375995_+	ENSG00000186470.12	ENST00000508906	hsa-miR-378a-5p	26375991	26375997	7mer-m8	26375976	26375998	148	-24.06
CAediting_466337	chr6_26375968_+	ENSG00000186470.12	ENST00000508906	hsa-miR-4297	26375964	26375970	7mer-m8	26375956	26375971	142	-15.84
CAediting_466344	chr6_26376163_+	ENSG00000186470.12	ENST00000508906	hsa-miR-4638-5p	26376157	26376164	8mer-1a	26376145	26376164	146	-21.99
CAediting_466341	chr6_26376066_+	ENSG00000186470.12	ENST00000508906	hsa-miR-4735-5p	26376060	26376066	7mer-m8	26376046	26376067	140	-5.1
CAediting_466333	chr6_26375935_+	ENSG00000186470.12	ENST00000508906	hsa-miR-5008-3p	26375929	26375935	7mer-m8	26375920	26375936	146	-21.53
CAediting_466345	chr6_26376213_+	ENSG00000186470.12	ENST00000508906	hsa-miR-526b-5p	26376209	26376216	8mer-1a	26376192	26376216	155	-18.07
CAediting_466346	chr6_26376214_+	ENSG00000186470.12	ENST00000508906	hsa-miR-526b-5p	26376209	26376216	8mer-1a	26376192	26376216	155	-18.07
CAediting_466337	chr6_26375968_+	ENSG00000186470.12	ENST00000508906	hsa-miR-5581-5p	26375964	26375970	7mer-m8	26375950	26375971	149	-21.59
CAediting_466347	chr6_26376238_+	ENSG00000186470.12	ENST00000508906	hsa-miR-627-3p	26376235	26376242	8mer-1a	26376223	26376242	150	-10.66
CAediting_466335	chr6_26375951_+	ENSG00000186470.12	ENST00000508906	hsa-miR-6504-3p	26375946	26375952	7mer-m8	26375932	26375953	144	-9.54
CAediting_466336	chr6_26375952_+	ENSG00000186470.12	ENST00000508906	hsa-miR-6504-3p	26375946	26375952	7mer-m8	26375932	26375953	144	-9.54
CAediting_466333	chr6_26375935_+	ENSG00000186470.12	ENST00000508906	hsa-miR-6737-3p	26375929	26375935	7mer-m8	26375915	26375936	143	-19.14
CAediting_466343	chr6_26376119_+	ENSG00000186470.12	ENST00000508906	hsa-miR-6747-3p	26376114	26376121	8mer-1a	26376099	26376121	149	-23.68
CAediting_466335	chr6_26375951_+	ENSG00000186470.12	ENST00000508906	hsa-miR-7151-3p	26375944	26375951	8mer-1a	26375935	26375951	150	-17.72
CAediting_466333	chr6_26375935_+	ENSG00000186470.12	ENST00000508906	hsa-miR-7157-3p	26375929	26375935	7mer-m8	26375915	26375936	140	-18.03
CAediting_466342	chr6_26376092_+	ENSG00000186470.12	ENST00000508906	hsa-miR-8052	26376091	26376097	7mer-1a	26376077	26376097	141	-21.07

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_980496	chr14_31014685_-	ENSG00000186470.12	ENST00000396934	hsa-miR-624-3p	26377546	26377552	7mer-m8	26377530	26377553	157	-14.34
CAediting_688080	chr9_63819626_+	ENSG00000186470.12	ENST00000396934	hsa-miR-4477b	26376554	26376561	8mer-1a	26376541	26376561	142	-10.9
CAediting_980496	chr14_31014685_-	ENSG00000186470.12	ENST00000508906	hsa-miR-624-3p	26377546	26377552	7mer-m8	26377530	26377553	157	-14.34
CAediting_688080	chr9_63819626_+	ENSG00000186470.12	ENST00000508906	hsa-miR-4477b	26376554	26376561	8mer-1a	26376541	26376561	142	-10.9
CAediting_980496	chr14_31014685_-	ENSG00000186470.12	ENST00000356386	hsa-miR-624-3p	26377546	26377552	7mer-m8	26377530	26377553	157	-14.34
CAediting_688080	chr9_63819626_+	ENSG00000186470.12	ENST00000356386	hsa-miR-4477b	26376554	26376561	8mer-1a	26376541	26376561	142	-10.9
CAediting_228905	chr2_188297554_+	ENSG00000186470.12	ENST00000396934	hsa-miR-561-3p	26376559	26376565	7mer-m8	26376545	26376566	147	-8.41
CAediting_396018	chr5_1062918_-	ENSG00000186470.12	ENST00000396934	hsa-miR-4635	26376209	26376215	7mer-1a	26376195	26376215	140	-22.32
CAediting_228905	chr2_188297554_+	ENSG00000186470.12	ENST00000508906	hsa-miR-561-3p	26376559	26376565	7mer-m8	26376545	26376566	147	-8.41
CAediting_396018	chr5_1062918_-	ENSG00000186470.12	ENST00000508906	hsa-miR-4635	26376209	26376215	7mer-1a	26376195	26376215	140	-22.32
CAediting_442554	chr5_154685830_+	ENSG00000186470.12	ENST00000524459	hsa-miR-1303	26368523	26368529	7mer-1a	26368508	26368529	142	-25.38
CAediting_1054808	chr15_66496985_-	ENSG00000186470.12	ENST00000527422	hsa-miR-4512	26375650	26375657	8mer-1a	26375640	26375657	150	-25.64
CAediting_228905	chr2_188297554_+	ENSG00000186470.12	ENST00000356386	hsa-miR-561-3p	26376559	26376565	7mer-m8	26376545	26376566	147	-8.41
CAediting_1054808	chr15_66496985_-	ENSG00000186470.12	ENST00000396948	hsa-miR-4512	26375650	26375657	8mer-1a	26375640	26375657	150	-25.64
CAediting_1229414	chr17_67471546_+	ENSG00000186470.12	ENST00000527639	hsa-miR-548aa	26373509	26373515	7mer-m8	26373491	26373516	155	-15.49
CAediting_468389	chr6_31355314_-	ENSG00000186470.12	ENST00000396934	hsa-miR-6891-5p	26376480	26376487	8mer-1a	26376469	26376487	140	-18.31
CAediting_468389	chr6_31355314_-	ENSG00000186470.12	ENST00000396934	hsa-miR-6891-5p	26376552	26376559	8mer-1a	26376539	26376559	148	-26.34
CAediting_468389	chr6_31355314_-	ENSG00000186470.12	ENST00000508906	hsa-miR-6891-5p	26376480	26376487	8mer-1a	26376469	26376487	140	-18.31
CAediting_468389	chr6_31355314_-	ENSG00000186470.12	ENST00000508906	hsa-miR-6891-5p	26376552	26376559	8mer-1a	26376539	26376559	148	-26.34
CAediting_468389	chr6_31355314_-	ENSG00000186470.12	ENST00000356386	hsa-miR-6891-5p	26376552	26376559	8mer-1a	26376539	26376559	148	-26.34

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1160181	chr17_7017644_-	ENSG00000186470.12	ENST00000396934	hsa-miR-195-3p	26378054	26378060	7mer-m8	26378041	26378061	142	-14.3
CAediting_980496	chr14_31014685_-	ENSG00000186470.12	ENST00000396934	hsa-miR-624-3p	26375823	26375829	7mer-m8	26375810	26375830	140	-12.17
CAediting_1351755	chr19_40282625_-	ENSG00000186470.12	ENST00000396934	hsa-miR-641	26377859	26377864	6mer	26377842	26377865	144	-18.29
CAediting_468389	chr6_31355314_-	ENSG00000186470.12	ENST00000396934	hsa-miR-6891-5p	26376609	26376615	7mer-m8	26376596	26376616	144	-18.57
CAediting_1160181	chr17_7017644_-	ENSG00000186470.12	ENST00000508906	hsa-miR-195-3p	26378054	26378060	7mer-m8	26378041	26378061	142	-14.3
CAediting_980496	chr14_31014685_-	ENSG00000186470.12	ENST00000508906	hsa-miR-624-3p	26375823	26375829	7mer-m8	26375810	26375830	140	-12.17
CAediting_1351755	chr19_40282625_-	ENSG00000186470.12	ENST00000508906	hsa-miR-641	26377859	26377864	6mer	26377842	26377865	144	-18.29
CAediting_468389	chr6_31355314_-	ENSG00000186470.12	ENST00000508906	hsa-miR-6891-5p	26376609	26376615	7mer-m8	26376596	26376616	144	-18.57
CAediting_1160181	chr17_7017644_-	ENSG00000186470.12	ENST00000356386	hsa-miR-195-3p	26378054	26378060	7mer-m8	26378041	26378061	142	-14.3
CAediting_468389	chr6_31355314_-	ENSG00000186470.12	ENST00000356386	hsa-miR-6891-5p	26376609	26376615	7mer-m8	26376596	26376616	144	-18.57

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for BTN3A2

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000356386.5	protein_coding
ENST00000377708.5	protein_coding
ENST00000396934.6	protein_coding
ENST00000396948.4	protein_coding
ENST00000508906.5	protein_coding
ENST00000527422.4	protein_coding
ENST00000527639.2	protein_coding
ENST00000531055.1	retained_intron
ENST00000532627.4	processed_transcript
ENST00000532994.1	processed_transcript
ENST00000604202.1	retained_intron

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_466332	ENST00000356386.5	chr6_26373010_+	-972.30	-967.40	-972.30
CAediting_466332	ENST00000377708.5	chr6_26373010_+	-562.80	-557.90	-576.30
CAediting_466333	ENST00000377708.5	chr6_26375935_+	-561.00	-557.90	-576.30
CAediting_466334	ENST00000377708.5	chr6_26375938_+	-558.00	-557.90	-576.30
CAediting_466335	ENST00000377708.5	chr6_26375951_+	-559.10	-557.90	-576.30
CAediting_466336	ENST00000377708.5	chr6_26375952_+	-558.40	-557.90	-576.30
CAediting_466337	ENST00000377708.5	chr6_26375968_+	-559.70	-557.90	-576.30
CAediting_466338	ENST00000377708.5	chr6_26375995_+	-557.20	-557.90	-576.30
CAediting_466339	ENST00000377708.5	chr6_26376003_+	-558.10	-557.90	-576.30
CAediting_466340	ENST00000377708.5	chr6_26376019_+	-557.60	-557.90	-576.30
CAediting_466341	ENST00000377708.5	chr6_26376066_+	-557.60	-557.90	-576.30
CAediting_466342	ENST00000377708.5	chr6_26376092_+	-561.70	-557.90	-576.30
CAediting_466343	ENST00000377708.5	chr6_26376119_+	-558.20	-557.90	-576.30
CAediting_466344	ENST00000377708.5	chr6_26376163_+	-558.90	-557.90	-576.30
CAediting_466345	ENST00000377708.5	chr6_26376213_+	-557.90	-557.90	-576.30
CAediting_466346	ENST00000377708.5	chr6_26376214_+	-557.90	-557.90	-576.30
CAediting_466332	ENST00000396934.6	chr6_26373010_+	-1204.40	-1199.50	-1217.10
CAediting_466333	ENST00000396934.6	chr6_26375935_+	-1199.50	-1199.50	-1217.10
CAediting_466334	ENST00000396934.6	chr6_26375938_+	-1199.30	-1199.50	-1217.10
CAediting_466335	ENST00000396934.6	chr6_26375951_+	-1200.30	-1199.50	-1217.10
CAediting_466336	ENST00000396934.6	chr6_26375952_+	-1198.90	-1199.50	-1217.10
CAediting_466337	ENST00000396934.6	chr6_26375968_+	-1199.20	-1199.50	-1217.10
CAediting_466338	ENST00000396934.6	chr6_26375995_+	-1200.10	-1199.50	-1217.10
CAediting_466339	ENST00000396934.6	chr6_26376003_+	-1200.10	-1199.50	-1217.10
CAediting_466340	ENST00000396934.6	chr6_26376019_+	-1200.30	-1199.50	-1217.10
CAediting_466341	ENST00000396934.6	chr6_26376066_+	-1201.40	-1199.50	-1217.10
CAediting_466342	ENST00000396934.6	chr6_26376092_+	-1203.20	-1199.50	-1217.10
CAediting_466343	ENST00000396934.6	chr6_26376119_+	-1201.00	-1199.50	-1217.10
CAediting_466344	ENST00000396934.6	chr6_26376163_+	-1205.40	-1199.50	-1217.10
CAediting_466345	ENST00000396934.6	chr6_26376213_+	-1199.70	-1199.50	-1217.10
CAediting_466346	ENST00000396934.6	chr6_26376214_+	-1199.50	-1199.50	-1217.10
CAediting_466347	ENST00000396934.6	chr6_26376238_+	-1200.40	-1199.50	-1217.10
CAediting_466332	ENST00000396948.4	chr6_26373010_+	-526.80	-521.90	-526.80
CAediting_466332	ENST00000508906.5	chr6_26373010_+	-1221.60	-1216.70	-1233.20
CAediting_466333	ENST00000508906.5	chr6_26375935_+	-1216.70	-1216.70	-1233.20
CAediting_466334	ENST00000508906.5	chr6_26375938_+	-1216.50	-1216.70	-1233.20
CAediting_466335	ENST00000508906.5	chr6_26375951_+	-1217.50	-1216.70	-1233.20
CAediting_466336	ENST00000508906.5	chr6_26375952_+	-1216.10	-1216.70	-1233.20
CAediting_466337	ENST00000508906.5	chr6_26375968_+	-1216.40	-1216.70	-1233.20
CAediting_466338	ENST00000508906.5	chr6_26375995_+	-1217.30	-1216.70	-1233.20
CAediting_466339	ENST00000508906.5	chr6_26376003_+	-1217.30	-1216.70	-1233.20
CAediting_466340	ENST00000508906.5	chr6_26376019_+	-1217.50	-1216.70	-1233.20
CAediting_466341	ENST00000508906.5	chr6_26376066_+	-1218.60	-1216.70	-1233.20
CAediting_466342	ENST00000508906.5	chr6_26376092_+	-1220.40	-1216.70	-1233.20
CAediting_466343	ENST00000508906.5	chr6_26376119_+	-1218.20	-1216.70	-1233.20
CAediting_466344	ENST00000508906.5	chr6_26376163_+	-1222.60	-1216.70	-1233.20
CAediting_466345	ENST00000508906.5	chr6_26376213_+	-1216.90	-1216.70	-1233.20
CAediting_466346	ENST00000508906.5	chr6_26376214_+	-1216.70	-1216.70	-1233.20
CAediting_466347	ENST00000508906.5	chr6_26376238_+	-1217.60	-1216.70	-1233.20
CAediting_466332	ENST00000527422.4	chr6_26373010_+	-523.90	-519.00	-523.90
CAediting_466332	ENST00000527639.2	chr6_26373010_+	-170.60	-165.70	-170.60
CAediting_466332	ENST00000531055.1	chr6_26373010_+	-199.20	-194.30	-199.20
CAediting_466332	ENST00000532627.4	chr6_26373010_+	-195.80	-190.90	-195.80
CAediting_466332	ENST00000532994.1	chr6_26373010_+	-306.50	-301.60	-306.50
CAediting_466332	ENST00000604202.1	chr6_26373010_+	-953.50	-948.60	-953.50

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Relation with ADAR for BTN3A2

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

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Relation with cancer stages for BTN3A2

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for BTN3A2

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for BTN3A2

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for BTN3A2

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
BTN3A2	C0006142	Malignant neoplasm of breast	1	CTD_human
BTN3A2	C0678222	Breast Carcinoma	1	CTD_human
BTN3A2	C1257931	Mammary Neoplasms, Human	1	CTD_human
BTN3A2	C1458155	Mammary Neoplasms	1	CTD_human
BTN3A2	C4704874	Mammary Carcinoma, Human	1	CTD_human

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene